+D GENES KO
#
KEGG Orthology (KO) - Heliomicrobium modesticaldum
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hmo00010]
D HM1_0763 hexokinase, putative K00844 HK; hexokinase [EC:2.7.1.1]
D HM1_1300 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HM1_0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HM1_0103 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HM1_1078 glpX; fructose-1,6-bisphosphatase, class ii K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HM1_1076 fbaA; fructose-1,6-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HM1_1787 aldolase family protein K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D HM1_1604 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HM1_1313 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HM1_2603 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1602 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1311 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1603 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HM1_1312 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HM1_1315 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HM1_1605 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_1316 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_0076 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HM1_1600 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HM1_2461 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HM1_0807 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HM1_0805 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0358 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_2766 korA; 2-oxoglutarate oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0804 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_0359 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_2763 oorB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_2756 ldh; l-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HM1_2632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HM1_0951 acsA; acetyl-coenzyme a synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HM1_2773 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:hmo00020]
D HM1_1471 icd; isocitrate dehydrogenase, nADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HM1_0805 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0358 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_2766 korA; 2-oxoglutarate oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0804 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_0359 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_2763 oorB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_0803 oorC; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D HM1_0360 ketoisovalerate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D HM1_2762 korC; 2-oxoglutarate oxidoreductase, gamma subunit, putative K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D HM1_0357 4fe-4S ferredoxin, iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D HM1_2767 4fe-4S ferredoxin, iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D HM1_0802 oorD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit, putative K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D HM1_0375 sucD; succinyl-coa synthetase alpha chain 2 K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HM1_0374 sucC; succinyl-coa synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HM1_1448 acetyl-CoA hydrolase, putative K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HM1_0345 acetyl-CoA hydrolase, putative K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HM1_0372 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HM1_0373 sdhB; succinate dehydrogenase/fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HM1_0371 sdhC; succinate dehydrogenase (cytochrome b558 subunit) K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HM1_0463 ttdA; tartrate dehydratase alpha subunit/fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D HM1_0464 fumB; fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D HM1_1472 mdh; malate dehydrogenase, nad-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HM1_2773 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HM1_0807 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:hmo00030]
D HM1_1300 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HM1_2140 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HM1_1269 tktC; transketolase, c-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HM1_1268 tktN; transketolase, n terminal half K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HM1_1077 transaldolase, putative K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HM1_1088 rpiB; ribose 5-phosphate isomerase b K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HM1_2452 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HM1_2416 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D HM1_0315 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HM1_0727 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HM1_0998 aor; tungsten-containing aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D HM1_1076 fbaA; fructose-1,6-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HM1_1787 aldolase family protein K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D HM1_1078 glpX; fructose-1,6-bisphosphatase, class ii K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HM1_0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HM1_0103 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:hmo00040]
D HM1_1115 galU; utp-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HM1_2140 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HM1_1725 araD; l-ribulose-5-phosphate 4-epimerase, putative K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:hmo00051]
D HM1_1237 algA; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D HM1_1241 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HM1_3137 nucleotidyl transferase domain protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HM1_1141 gdp-fucose synthetase nad dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D HM1_1725 araD; l-ribulose-5-phosphate 4-epimerase, putative K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D HM1_0763 hexokinase, putative K00844 HK; hexokinase [EC:2.7.1.1]
D HM1_0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HM1_0103 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HM1_1078 glpX; fructose-1,6-bisphosphatase, class ii K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HM1_1076 fbaA; fructose-1,6-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HM1_1787 aldolase family protein K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D HM1_1604 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HM1_1313 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HM1_1088 rpiB; ribose 5-phosphate isomerase b K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:hmo00052]
D HM1_1054 galE; udp-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HM1_1189 nad-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HM1_1115 galU; utp-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HM1_0763 hexokinase, putative K00844 HK; hexokinase [EC:2.7.1.1]
D HM1_1243 glf; udp-galactopyranose mutase, putative K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HM1_0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HM1_0103 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:hmo00500]
D HM1_1115 galU; utp-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HM1_0110 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D HM1_2046 glycosyl hydrolase, family 57, putative K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HM1_2990 glycoside hydrolase, family 57 K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HM1_2568 glgP; alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HM1_0218 glgP; alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HM1_1305 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HM1_1304 alpha amylase catalytic region, putative K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D HM1_0763 hexokinase, putative K00844 HK; hexokinase [EC:2.7.1.1]
D HM1_1300 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hmo00520]
D HM1_0763 hexokinase, putative K00844 HK; hexokinase [EC:2.7.1.1]
D HM1_1526 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HM1_1525 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HM1_0728 glmU; udp-n-acetylglucosamine pyrophosphorylase, putative K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HM1_1109 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_0987 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_2062 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_2061 murB; udp-n-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HM1_1094 udp-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HM1_1115 galU; utp-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HM1_1054 galE; udp-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HM1_1189 nad-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HM1_1243 glf; udp-galactopyranose mutase, putative K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HM1_1300 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HM1_1241 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HM1_3137 nucleotidyl transferase domain protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D HM1_1237 algA; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D HM1_1141 gdp-fucose synthetase nad dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:hmo00620]
D HM1_0951 acsA; acetyl-coenzyme a synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HM1_0807 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HM1_0805 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0358 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_2766 korA; 2-oxoglutarate oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0804 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_0359 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_2763 oorB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_2632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HM1_2157 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HM1_0445 pduL; propanediol utilization protein, putative K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HM1_0076 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HM1_1600 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HM1_0080 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HM1_0283 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HM1_0081 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HM1_1448 acetyl-CoA hydrolase, putative K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HM1_0345 acetyl-CoA hydrolase, putative K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HM1_2756 ldh; l-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HM1_1845 metallo-beta-lactamase family protein, putative K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HM1_1638 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D HM1_0282 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D HM1_0380 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D HM1_1472 mdh; malate dehydrogenase, nad-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HM1_0463 ttdA; tartrate dehydratase alpha subunit/fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D HM1_0464 fumB; fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D HM1_2773 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HM1_2461 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_1515 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D HM1_1519 2-isopropylmalate synthase/homocitrate synthase family protein, putative K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D HM1_0858 nifV; homocitrate synthase, nifv K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
D HM1_2993 homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hmo00630]
D HM1_0951 acsA; acetyl-coenzyme a synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HM1_1472 mdh; malate dehydrogenase, nad-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_0377 methymalonyl-coa mutase c-terminal domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D HM1_0376 methylmalonyl-coa mutase, n-terminal domain/subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D HM1_0364 glcD; glycolate oxidase, subunit glcd K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D HM1_0366 iron-sulfur cluster-binding protein, putative K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D HM1_0770 gyaR; glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D HM1_0389 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HM1_1613 gph; phosphoglycolate phosphatase, putative K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HM1_2353 glnA; glutamine synthetase, type i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HM1_1090 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HM1_0193 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HM1_1737 4fe-4S binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
C 00640 Propanoate metabolism [PATH:hmo00640]
D HM1_0951 acsA; acetyl-coenzyme a synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HM1_2157 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HM1_0445 pduL; propanediol utilization protein, putative K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HM1_0900 acyl-coa dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D HM1_0080 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HM1_0283 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HM1_0081 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HM1_0377 methymalonyl-coa mutase c-terminal domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D HM1_0376 methylmalonyl-coa mutase, n-terminal domain/subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D HM1_0374 sucC; succinyl-coa synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HM1_0375 sucD; succinyl-coa synthetase alpha chain 2 K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HM1_2756 ldh; l-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:hmo00650]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_0895 hbd; 3-hydroxybutyryl-coa dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D HM1_0073 3-hydroxyacyl-coa dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D HM1_0893 crt; 3-hydroxybutyryl-coa dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D HM1_0900 acyl-coa dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D HM1_0898 acetyl-coenzyme a synthetase family protein, putative K01896 ACSM; medium-chain acyl-CoA synthetase [EC:6.2.1.2]
D HM1_2632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HM1_0379 biotin carboxyl carrier protein, putative K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D HM1_0372 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HM1_0373 sdhB; succinate dehydrogenase/fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HM1_0371 sdhC; succinate dehydrogenase (cytochrome b558 subunit) K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HM1_1448 acetyl-CoA hydrolase, putative K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HM1_0345 acetyl-CoA hydrolase, putative K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D HM1_0807 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HM1_0805 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0358 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_2766 korA; 2-oxoglutarate oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0804 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_0359 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_2763 oorB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_1979 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HM1_1514 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HM1_1980 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HM1_1512 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:hmo00660]
D HM1_1979 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HM1_1514 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HM1_1980 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HM1_1512 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HM1_0374 sucC; succinyl-coa synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HM1_0375 sucD; succinyl-coa synthetase alpha chain 2 K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HM1_1516 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HM1_1517 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HM1_1518 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:hmo00562]
D HM1_3138 phospholipase C zinc-binding domain protein K01114 plc; phospholipase C [EC:3.1.4.3]
D HM1_1604 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HM1_1313 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hmo00190]
D HM1_2197 nuoB; proton-translocating NADH-ubiquinone oxidoreductase, chain b K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D HM1_2198 nuoC; proton-translocating NADH-ubiquinone oxidoreductase, chain c K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D HM1_2199 nuoD; proton-translocating NADH-ubiquinone oxidoreductase, chain d K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D HM1_1743 nuoE; proton-translocating NADH-ubiquinone oxidoreductase, chain e K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D HM1_1028 NADH dehydrogenase conserved domain protein, nuoe and nuof K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D HM1_1744 nuoF; proton-translocating NADH-ubiquinone oxidoreductase, chain f K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D HM1_2200 nuoH; proton-translocating NADH-ubiquinone oxidoreductase, chain h K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D HM1_2201 nuoI; proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D HM1_2204 nuoL; proton-translocating NADH-ubiquinone oxidoreductase, chain l K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D HM1_2205 nuoM; proton-translocating NADH-ubiquinone oxidoreductase, chain m K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D HM1_2206 nuoN; proton-translocating NADH-ubiquinone oxidoreductase, chain n K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D HM1_2196 nuoA; proton-translocating NADH-ubiquinone oxidoreductase, chain a K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2]
D HM1_2203 nuoK; proton-translocating NADH-ubiquinone oxidoreductase, chain k K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D HM1_1527 pyridine nucleotide-disulphide oxidoreductase, putative K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HM1_1010 pyridine nucleotide-disulphide oxidoreductase, putative K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D HM1_0372 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HM1_0373 sdhB; succinate dehydrogenase/fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HM1_0371 sdhC; succinate dehydrogenase (cytochrome b558 subunit) K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HM1_1803 cydA; cytochrome bd ubiquinol oxidase, subunit i K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HM1_1802 cydB; cytochrome bd ubiquinol oxidase, subunit ii K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HM1_1102 atpA; ATP synthase f1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HM1_1104 atpD; ATP synthase f1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HM1_1103 atpG; ATP synthase f1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HM1_1101 atpH; ATP synthase f1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HM1_1105 atpC; ATP synthase f1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HM1_1098 atpB; ATP synthase f0, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HM1_1100 atpF; ATP synthase f0, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HM1_1099 atpE; ATP synthase f0, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HM1_0555 ppaC; manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D HM1_0232 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:hmo00710]
D HM1_1603 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HM1_1312 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HM1_2603 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1602 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1311 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1076 fbaA; fructose-1,6-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HM1_1078 glpX; fructose-1,6-bisphosphatase, class ii K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HM1_1269 tktC; transketolase, c-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HM1_1268 tktN; transketolase, n terminal half K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HM1_1088 rpiB; ribose 5-phosphate isomerase b K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D HM1_1604 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HM1_1313 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HM1_2140 rpe; ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HM1_1077 transaldolase, putative K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HM1_2773 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D HM1_2461 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HM1_1472 mdh; malate dehydrogenase, nad-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:hmo00720]
D HM1_0807 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D HM1_2461 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HM1_1472 mdh; malate dehydrogenase, nad-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HM1_0463 ttdA; tartrate dehydratase alpha subunit/fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D HM1_0464 fumB; fumarate hydratase, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D HM1_0372 sdhA; succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D HM1_0373 sdhB; succinate dehydrogenase/fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D HM1_0371 sdhC; succinate dehydrogenase (cytochrome b558 subunit) K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D HM1_0375 sucD; succinyl-coa synthetase alpha chain 2 K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D HM1_0374 sucC; succinyl-coa synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_0805 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0358 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_2766 korA; 2-oxoglutarate oxidoreductase, alpha subunit, putative K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D HM1_0804 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_0359 ketoisovalerate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_2763 oorB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D HM1_0803 oorC; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D HM1_0360 ketoisovalerate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D HM1_2762 korC; 2-oxoglutarate oxidoreductase, gamma subunit, putative K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D HM1_0357 4fe-4S ferredoxin, iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D HM1_2767 4fe-4S ferredoxin, iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D HM1_0802 oorD; 2-oxoacid:ferredoxin oxidoreductase, delta subunit, putative K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D HM1_1471 icd; isocitrate dehydrogenase, nADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HM1_0080 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HM1_0283 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HM1_0081 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HM1_0376 methylmalonyl-coa mutase, n-terminal domain/subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D HM1_0377 methymalonyl-coa mutase c-terminal domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D HM1_1745 fdhA; formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D HM1_0672 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HM1_1888 folD; tetrahydrofolate dehydrogenase/cyclohydrolase bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HM1_1889 methenyltetrahydrofolate cyclohydrolase, putative K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D HM1_0445 pduL; propanediol utilization protein, putative K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HM1_2157 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HM1_0951 acsA; acetyl-coenzyme a synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:hmo00680]
D HM1_1737 4fe-4S binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D HM1_2010 4fe-4S ferredoxin, iron-sulfur binding protein, putative K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6]
D HM1_1745 fdhA; formate dehydrogenase, alpha subunit K05299 fdhA; formate dehydrogenase (NADP+) alpha subunit [EC:1.17.1.10]
D HM1_1090 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HM1_1605 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_1316 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_1472 mdh; malate dehydrogenase, nad-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HM1_1076 fbaA; fructose-1,6-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HM1_1787 aldolase family protein K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D HM1_1078 glpX; fructose-1,6-bisphosphatase, class ii K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D HM1_0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HM1_0103 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D HM1_1872 formylmethanofuran dehydrogenase, subunit e K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D HM1_2008 hdrA; heterodisulfide reductase, subunit a K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D HM1_2007 heterodisulfide reductase, putative K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D HM1_2006 4fe-4S ferredoxin, iron-sulfur binding protein, putative K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D HM1_2009 mvhD; methyl-viologen-reducing hydrogenase domain protein, subunit d, putative K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D HM1_2157 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HM1_0951 acsA; acetyl-coenzyme a synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HM1_1315 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HM1_0851 serA; d-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HM1_2036 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HM1_2542 serB; phosphoserine phosphatase, putative K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HM1_2405 phoE; phosphoglycerate mutase domain protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D HM1_0946 phosphosulfolactate synthase ((2r)-phospho-3-sulfolactate synthase), putative K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D HM1_0947 comB; 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:hmo00910]
D HM1_0427 nrfA; nitrite reductase (cytochrome; ammonia-forming), putative K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D HM1_0426 nrfH; cytochrome c nitrite reductase, small subunit nrfh K15876 nrfH; cytochrome c nitrite reductase small subunit
D HM1_0865 nifD; dinitrogenase molybdenum-iron protein alpha subunit nifd K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D HM1_0864 nifK; dinitrogenase molybdenum-iron protein beta subunit nifk K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D HM1_0866 nifH; dinitrogenase iron protein nifh K02588 nifH; nitrogenase iron protein NifH
D HM1_0198 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D HM1_2167 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D HM1_2353 glnA; glutamine synthetase, type i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HM1_1037 gltB; glutamate synthase [nadph] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HM1_0290 gltD; glutamate synthase (nadph), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HM1_1039 gltD; glutamate synthase (nadph) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HM1_0999 glutamate synthase (nadph) beta chain, putative K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HM1_2643 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HM1_0976 ecaB; carbonic anhydrase, putative K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:hmo00920]
D HM1_1170 sulfate abc transporter, sulfate-binding protein, putative K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D HM1_1171 cysT; sulfate abc transporter, permease protein cyst, putative K02046 cysU; sulfate/thiosulfate transport system permease protein
D HM1_1172 sulfate abc transporter, permease protein cysw K02047 cysW; sulfate/thiosulfate transport system permease protein
D HM1_1174 cysA; sulfate/thiosulfate import ATP-binding protein cysa, putative K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HM1_1168 cysNC; sulfate adenylate transferase, large subunit/adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HM1_1167 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HM1_2316 dhh family domain protein, putative K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D HM1_1356 cysE; serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HM1_1734 cysK; cysteine synthase a K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HM1_1681 cysK; cysteine synthase a K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HM1_0095 metX; homoserine o-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D HM1_1730 metB; cystathionine gamma-synthase, putative K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hmo00061]
D HM1_0080 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HM1_0283 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HM1_0081 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HM1_2166 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HM1_2164 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HM1_2162 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HM1_2168 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HM1_1246 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HM1_2165 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HM1_1184 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HM1_0231 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HM1_2163 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HM1_0075 lcfA; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_0197 fadD; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:hmo00071]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_0072 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HM1_0073 3-hydroxyacyl-coa dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D HM1_0900 acyl-coa dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D HM1_0075 lcfA; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_0197 fadD; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_2787 aas; 2-acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D HM1_2632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:hmo00074]
D HM1_1704 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HM1_2166 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HM1_2164 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hmo00561]
D HM1_0193 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HM1_0840 dhaK; dihydroxyacetone kinase, dhak subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D HM1_0839 dhaL; dihydroxyacetone kinase, l subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D HM1_0838 dhaM; dihydroxyacetone kinase, phosphotransfer subunit, putative K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D HM1_1596 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HM1_2161 plsX; fatty acid/phospholipid synthesis protein plsx K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HM1_1986 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HM1_2546 membrane protein, putative K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HM1_1929 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HM1_2449 dgkA; diacylglycerol kinase, putative K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HM1_2271 1,2-diacylglycerol 3-glucosyltransferase, putative K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:hmo00564]
D HM1_1987 gpsA; glycerol-3-phosphate dehydrogenase (nad(p)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HM1_1597 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit a K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HM1_1598 glpB; anaerobic glycerol-3-phosphate dehydrogenase subunit b K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D HM1_1599 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit c K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D HM1_1986 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HM1_2546 membrane protein, putative K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HM1_1929 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HM1_2449 dgkA; diacylglycerol kinase, putative K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HM1_3138 phospholipase C zinc-binding domain protein K01114 plc; phospholipase C [EC:3.1.4.3]
D HM1_2787 aas; 2-acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D HM1_2262 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HM1_2544 pssA; cdp-diacylglycerol--serine o-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HM1_2775 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D HM1_2370 pgsA; cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HM1_3117 ubiA; 4-hydroxybenzoate polyprenyltransferase, putative K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D HM1_3144 geranylgeranylglyceryl phosphate synthase, putative K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
C 00565 Ether lipid metabolism
D HM1_3138 phospholipase C zinc-binding domain protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:hmo00592]
D HM1_0072 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
D HM1_1628 lipolytic enzyme, g-d-s-l K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hmo00230]
D HM1_0309 hydrolase, nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HM1_0315 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HM1_0727 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HM1_3109 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HM1_3105 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HM1_3107 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HM1_2619 purL; phosphoribosylformylglycinamidine (fgam) synthase, purl component K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HM1_3110 purS; phosphoribosylformylglycinamidine (fgam) synthase, purs component K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D HM1_3108 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HM1_3114 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HM1_3111 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HM1_3112 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HM1_3106 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HM1_2558 surE; acid phosphatase sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HM1_2077 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HM1_0058 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HM1_2408 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HM1_0677 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HM1_0466 rdgB; non-canonical purine ntp pyrophosphatase, rdgb, putative K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HM1_1451 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HM1_2648 xdhA; xanthine dehydrogenase molybdenum-binding subunit K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D HM1_2647 dehydrogenase, fad-binding subunit-containing K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D HM1_0057 guaA; gmp synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HM1_2127 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HM1_2070 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HM1_1993 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D HM1_0525 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D HM1_1843 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HM1_0233 exopolyphosphatase, putative K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HM1_0710 exopolyphosphatase ppx K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D HM1_1775 rela / spot region protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D HM1_0977 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HM1_2381 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D HM1_1399 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HM1_1168 cysNC; sulfate adenylate transferase, large subunit/adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HM1_1167 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HM1_2643 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:hmo00240]
D HM1_1434 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HM1_2110 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HM1_2109 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HM1_1432 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HM1_2107 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HM1_2108 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HM1_2112 pyrD; dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HM1_2111 pyrK; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D HM1_0242 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HM1_0241 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HM1_2258 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HM1_0677 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HM1_2733 maf; septum formation protein maf, putative K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D HM1_1068 pyrG; ctp synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HM1_1928 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HM1_2721 udk; phosphoribulokinase/uridine kinase family protein K00876 udk; uridine kinase [EC:2.7.1.48]
D HM1_2558 surE; acid phosphatase sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HM1_1091 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HM1_2105 pyrR; pyrr bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HM1_2381 conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D HM1_0316 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D HM1_2450 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HM1_2070 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HM1_1092 comE; come operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HM1_0759 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HM1_2472 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HM1_2642 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hmo00250]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HM1_0665 nadB; l-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HM1_0486 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D HM1_0348 hydrolase, carbon-nitrogen family K13566 NIT2; omega-amidase [EC:3.5.1.3]
D HM1_1436 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HM1_1460 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HM1_0977 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HM1_3112 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HM1_2107 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HM1_1037 gltB; glutamate synthase [nadph] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HM1_0290 gltD; glutamate synthase (nadph), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HM1_1039 gltD; glutamate synthase (nadph) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HM1_0999 glutamate synthase (nadph) beta chain, putative K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D HM1_2353 glnA; glutamine synthetase, type i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HM1_1434 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HM1_2110 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HM1_2109 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HM1_1432 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HM1_1526 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HM1_3109 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hmo00260]
D HM1_2331 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HM1_1939 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HM1_2330 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HM1_1936 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HM1_1938 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HM1_1937 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HM1_2697 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HM1_1090 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HM1_0193 garK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HM1_1315 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HM1_0851 serA; d-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HM1_2036 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HM1_2542 serB; phosphoserine phosphatase, putative K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HM1_2405 phoE; phosphoglycerate mutase domain protein K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D HM1_2544 pssA; cdp-diacylglycerol--serine o-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D HM1_0731 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HM1_1922 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HM1_1921 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HM1_3061 pyridoxal-phosphate dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:hmo00270]
D HM1_1356 cysE; serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HM1_1734 cysK; cysteine synthase a K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HM1_1681 cysK; cysteine synthase a K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HM1_1731 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HM1_1721 5-methyltetrahydrofolate--homocysteine s-methyltransferase, putative K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HM1_2499 metH; methionine synthase, putative K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HM1_2130 metK; s-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HM1_0215 speD; s-adenosylmethionine decarboxylase proenzyme (adometdc)(samdc) K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HM1_1062 speD; s-adenosylmethionine decarboxylase proenzyme (adometdc)(samdc) K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HM1_1641 speH; s-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HM1_1758 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HM1_2077 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D HM1_2178 amidohydrolase, putative K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D HM1_2689 amidohydrolase, putative K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D HM1_2176 mtaP; methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D HM1_2177 putative translation initiation factor, aif-2bi family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D HM1_2947 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_2858 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_2541 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HM1_2331 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HM1_1939 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HM1_2330 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HM1_1936 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HM1_1938 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HM1_0095 metX; homoserine o-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D HM1_1730 metB; cystathionine gamma-synthase, putative K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HM1_0096 cysD; o-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D HM1_1510 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_2487 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HM1_2756 ldh; l-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HM1_1472 mdh; malate dehydrogenase, nad-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D HM1_0851 serA; d-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HM1_2036 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hmo00280]
D HM1_1510 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_2487 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_0900 acyl-coa dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D HM1_0072 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HM1_0377 methymalonyl-coa mutase c-terminal domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D HM1_0376 methylmalonyl-coa mutase, n-terminal domain/subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hmo00290]
D HM1_0731 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HM1_1516 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HM1_1517 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HM1_1518 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HM1_1979 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HM1_1514 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HM1_1980 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HM1_1512 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HM1_1513 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HM1_1511 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HM1_1510 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_2487 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_1515 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D HM1_1519 2-isopropylmalate synthase/homocitrate synthase family protein, putative K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:hmo00300]
D HM1_1936 thrA; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HM1_2331 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HM1_1939 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HM1_2330 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HM1_2332 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HM1_2327 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HM1_1431 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HM1_2123 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HM1_0993 aminotransferase, class i and ii K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D HM1_2384 aspB; aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D HM1_1878 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HM1_2054 murE; udp-n-acetylmuramoylalanyl-d-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HM1_2055 murF; udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate-d-alanyl-d-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HM1_1592 murF; udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate--d-alanyl-d-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:hmo00310]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_1941 oat; ornithine aminotransferase, putative K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D HM1_1164 fad dependent oxidoreductase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
C 00220 Arginine biosynthesis [PATH:hmo00220]
D HM1_1435 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HM1_2644 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HM1_1436 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HM1_1460 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HM1_2353 glnA; glutamine synthetase, type i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HM1_1434 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HM1_2110 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HM1_2109 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HM1_1432 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HM1_2643 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HM1_0111 acetyltransferase, gnat family K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D HM1_1429 argJ; arginine biosynthesis bifunctional protein argj K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D HM1_1430 argB; acetylglutamate kinase, putative K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D HM1_1428 argC; n-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D HM1_1431 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:hmo00330]
D HM1_0760 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D HM1_1757 pdaD; arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D HM1_2344 aguA; agmatine deiminase. putative K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D HM1_2343 hydrolase, carbon-nitrogen family, putative K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D HM1_1758 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HM1_0215 speD; s-adenosylmethionine decarboxylase proenzyme (adometdc)(samdc) K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HM1_1062 speD; s-adenosylmethionine decarboxylase proenzyme (adometdc)(samdc) K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HM1_1641 speH; s-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D HM1_1941 oat; ornithine aminotransferase, putative K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D HM1_2091 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HM1_2703 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HM1_2702 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:hmo00340]
D HM1_3052 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D HM1_3053 hisS; histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D HM1_3044 hisI; histidine biosynthesis bifunctional protein hisie K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D HM1_3046 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D HM1_3047 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D HM1_3045 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D HM1_3048 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D HM1_3049 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HM1_2038 hisJ; histidinol phosphate phosphatase, hisj family, putative K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D HM1_1034 hisJ; histidinol phosphate phosphatase, hisj family, putative K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D HM1_3051 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:hmo00350]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HM1_3049 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HM1_2632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:hmo00360]
D HM1_1465 paaK; phenylacetate-coa ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D HM1_0480 paaK; phenylacetate-coa ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D HM1_2563 paaK; phenylacetate-coa ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D HM1_0895 hbd; 3-hydroxybutyryl-coa dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HM1_3049 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hmo00400]
D HM1_1989 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, putative K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HM1_1923 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, putative K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HM1_0248 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HM1_1787 aldolase family protein K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D HM1_0245 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D HM1_0247 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HM1_1927 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HM1_0246 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HM1_1916 trpE; anthranilate synthase component i K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HM1_1917 trpG; anthranilate synthase component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HM1_1918 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D HM1_1920 trpF; n-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D HM1_1919 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D HM1_1922 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HM1_1921 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HM1_3061 pyridoxal-phosphate dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HM1_1904 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D HM1_1935 pheB; act domain protein pheb K06209 pheB; chorismate mutase [EC:5.4.99.5]
D HM1_1926 tyrA; prephenate dehydrogenase, putative K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HM1_1924 pheA; chorismate mutase/prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HM1_3049 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:hmo00410]
D HM1_0667 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D HM1_0668 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HM1_2642 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D HM1_0900 acyl-coa dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:hmo00430]
D HM1_0445 pduL; propanediol utilization protein, putative K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D HM1_2157 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:hmo00450]
D HM1_1730 metB; cystathionine gamma-synthase, putative K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HM1_1731 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HM1_1721 5-methyltetrahydrofolate--homocysteine s-methyltransferase, putative K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HM1_2499 metH; methionine synthase, putative K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HM1_2350 trxB; thioredoxin reductase, putative K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HM1_0984 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HM1_0369 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HM1_2651 uncharacterized protein ygfk K12527 ygfK; putative selenate reductase [EC:1.97.1.9]
D HM1_1168 cysNC; sulfate adenylate transferase, large subunit/adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HM1_1167 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HM1_2508 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HM1_2507 selA; l-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HM1_0752 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D HM1_1090 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hmo00470]
D HM1_1707 alr; alanine racemase, putative K01775 alr; alanine racemase [EC:5.1.1.1]
D HM1_1070 alr; alanine racemase, putative K01775 alr; alanine racemase [EC:5.1.1.1]
D HM1_2570 ddl; d-alanine--d-alanine ligase, putative K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HM1_0460 murI; glutamate racemase, putative K01776 murI; glutamate racemase [EC:5.1.1.3]
D HM1_2057 murD; udp-n-acetylmuramoylalanine--d-glutamate ligase, putative K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HM1_2123 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D HM1_1878 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:hmo00480]
D HM1_0870 lamb/ycsf K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D HM1_1471 icd; isocitrate dehydrogenase, nADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D HM1_1758 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:hmo00540]
D HM1_1149 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HM1_1146 ghmp kinase, putative K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
C 00542 O-Antigen repeat unit biosynthesis [PATH:hmo00542]
D HM1_1185 undecaprenyl-phosphate n-acetylglucosaminyl 1-phosphatetransferase, putative K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hmo00541]
D HM1_1115 galU; utp-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HM1_1054 galE; udp-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HM1_1189 nad-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HM1_1243 glf; udp-galactopyranose mutase, putative K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D HM1_1175 rfbD; dtdp-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D HM1_1237 algA; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D HM1_1241 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D HM1_1141 gdp-fucose synthetase nad dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D HM1_0728 glmU; udp-n-acetylglucosamine pyrophosphorylase, putative K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HM1_1094 udp-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:hmo00550]
D HM1_1109 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_0987 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_2062 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_2061 murB; udp-n-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HM1_2060 murC; udp-n-acetylmuramate--alanine ligase, putative K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HM1_2057 murD; udp-n-acetylmuramoylalanine--d-glutamate ligase, putative K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HM1_2054 murE; udp-n-acetylmuramoylalanyl-d-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HM1_2570 ddl; d-alanine--d-alanine ligase, putative K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HM1_2055 murF; udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate-d-alanyl-d-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HM1_1592 murF; udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate--d-alanyl-d-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HM1_2261 uppS; undecaprenyl diphosphate synthase, putative K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HM1_1680 undecaprenol diphosphatase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HM1_2056 mraY; phospho-n-acetylmuramoyl-pentapeptide-transferase, putative K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HM1_2059 murG; undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase, putative K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HM1_1810 penicillin-binding protein 1a/1b family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HM1_1892 mrcA; penicillin-binding protein 1a K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HM1_2727 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HM1_2053 spoVD; stage v sporulation protein d K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D HM1_2324 dacA; d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HM1_0318 dacA; d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HM1_0709 udp-n-acetylmuramyl tripeptide synthetase, putative K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HM1_0711 cobyric acid synthase cobq, putative K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:hmo00552]
D HM1_1680 undecaprenol diphosphatase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HM1_1185 undecaprenyl-phosphate n-acetylglucosaminyl 1-phosphatetransferase, putative K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HM1_1123 glycosyl transferase, wecb/taga/cpsf family, putative K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D HM1_2540 cell envelope-related transcriptional attenuator, putative K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D HM1_2271 1,2-diacylglycerol 3-glucosyltransferase, putative K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D HM1_1185 undecaprenyl-phosphate n-acetylglucosaminyl 1-phosphatetransferase, putative K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:hmo00543]
D HM1_1185 undecaprenyl-phosphate n-acetylglucosaminyl 1-phosphatetransferase, putative K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HM1_1356 cysE; serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hmo00730]
D HM1_0202 thiC; thiamine biosynthesis protein, thic K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D HM1_2074 thiC; thiamine biosynthesis protein, thic K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D HM1_0204 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HM1_1864 nifS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HM1_2030 thiH; thiazole biosynthesis protein thih K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D HM1_0295 dxs; 1-deoxy-d-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HM1_2031 thiG; thiazole biosynthesis protein thig K03149 thiG; thiazole synthase [EC:2.8.1.10]
D HM1_0113 thiamine monophosphate synthase, putative K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HM1_0203 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D HM1_2139 GTPase, putative K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HM1_2777 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HM1_1399 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:hmo00740]
D HM1_2143 ribAB; riboflavin biosynthesis family protein ribab K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HM1_2141 ribD; riboflavin biosynthesis protein ribd K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HM1_2144 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HM1_2142 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HM1_2318 ribF; riboflavin biosynthesis protein ribf K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HM1_0309 hydrolase, nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HM1_2049 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:hmo00750]
D HM1_2145 pdxK; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HM1_1020 thiD; phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HM1_2036 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D HM1_1937 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HM1_2697 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HM1_0855 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D HM1_0854 pdxT; glutamine amidotransferase subunit pdxt K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hmo00760]
D HM1_0665 nadB; l-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D HM1_0666 nadA; quinolinate synthetase complex, a subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D HM1_0664 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D HM1_2558 surE; acid phosphatase sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D HM1_2701 nadD; nicotinate nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HM1_2802 nad+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D HM1_0298 nadF; ATP-nad kinase, putative K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:hmo00770]
D HM1_1979 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HM1_1514 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HM1_1980 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HM1_1512 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HM1_1513 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HM1_1511 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HM1_2754 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D HM1_2755 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HM1_3023 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D HM1_0668 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D HM1_0662 transcriptional activator, putative, baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D HM1_0351 putative transcriptional acitvator, baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D HM1_2129 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D HM1_2154 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HM1_1752 coaE; dephospho-coa kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HM1_1704 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HM1_1510 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_2487 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_2642 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D HM1_0667 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:hmo00780]
D HM1_2168 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HM1_1246 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HM1_2165 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HM1_1184 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HM1_0395 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HM1_0394 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D HM1_1678 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D HM1_0663 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:hmo00790]
D HM1_2556 folE; GTP cyclohydrolase i K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HM1_2777 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HM1_0669 folB; folate synthesis, bifunctional protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D HM1_0670 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HM1_2748 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HM1_2143 ribAB; riboflavin biosynthesis family protein ribab K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HM1_0437 6-pyruvoyl-tetrahydropterin synthase, putative K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HM1_2555 radical sam domain protein, putative K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HM1_0505 exsb protein, putative K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HM1_0064 moaA; molybdenum cofactor biosynthesis protein a K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HM1_0063 moaC; molybdenum cofactor biosynthesis protein c K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HM1_0061 molybdenum cofactor biosynthesis protein, putative K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HM1_2675 moeA; molybdopterin biosynthesis protein moea K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HM1_2676 molybdenum cofactor biosynthesis protein, putative K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HM1_2687 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D HM1_2002 mobA; molybdopterin-guanine dinucleotide biosynthesis protein a K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:hmo00670]
D HM1_0672 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HM1_1888 folD; tetrahydrofolate dehydrogenase/cyclohydrolase bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HM1_1889 methenyltetrahydrofolate cyclohydrolase, putative K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D HM1_1090 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HM1_3107 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HM1_3106 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HM1_2133 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HM1_1721 5-methyltetrahydrofolate--homocysteine s-methyltransferase, putative K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HM1_2499 metH; methionine synthase, putative K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HM1_1741 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hmo00860]
D HM1_2791 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HM1_1964 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D HM1_0704 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D HM1_1972 hemL; glutamate-1-semialdehyde-2,1-aminomutase heml K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HM1_1968 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HM1_1965 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D HM1_0647 hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D HM1_1966 cobA; uroporphyrinogen iii synthase/methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D HM1_1963 siroheme synthase, n-terminal K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D HM1_1970 transcriptional regulator, putative K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D HM1_1971 heme biosynthesis protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D HM1_1967 elongator protein 3/miab/nifb, putative K22226 ahbC; Fe-coproporphyrin III synthase
D HM1_1969 radical sam K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D HM1_0528 cbiK; cobalt chelatase cbik K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D HM1_2388 cbiL; precorrin-2 c20-methyltransferase, cbil putative K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D HM1_2391 cbiH; precorrin-3b c17-methyltransferase, cbih K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D HM1_2389 cbiF; precorrin-4 c11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D HM1_2390 cbiG; precorrin-3b c17-methyltransferase, putative K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D HM1_2392 cbiJ; precorrin-6x reductase cbij K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D HM1_2386 cbiD; cobalamin biosynthesis protein cbid K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D HM1_2387 cobL; precorrin-6y c5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D HM1_2394 precorrin-8x methylmutase cbic/cobh putative K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D HM1_2399 cbiA; cobyrinic acid a,c-diamide synthase cbia putative K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D HM1_2400 cobO; ATP:corrinoid adenosyltransferase btur/cobo/cobp K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HM1_1898 cobO; ATP:corrinoid adenosyltransferase btur/cobo/cobp K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D HM1_2397 cobQ; cobyric acid synthase cobq K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D HM1_2398 cbiB; cobalamin biosynthesis protein cbib/cobd K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D HM1_1855 conserved domain protein K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D HM1_2396 bifunctional adenosylcobalamin biosynthesis protein cobp/cobu K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D HM1_2402 cobS; cobalamin 5'-phosphate synthase cobs K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D HM1_2401 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (nn:dbi prt) (n(1)-alpha-phosphoribosyltransferase) K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D HM1_2403 ghmp kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D HM1_2404 cobD; l-threonine-o-3-phosphate decarboxylase, putative K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D HM1_0682 bchH; magnesium chelatase, h subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D HM1_0683 bchD; magnesium chelatase ATPase subunit d K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D HM1_0684 bchI; magnesium chelatase ATPase subunit i K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D HM1_0689 bchM; magnesium protoporphyrin o-methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D HM1_0688 bchE; magnesium-protoporphyrin ix monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D HM1_0693 bchJ; bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D HM1_0687 bchL; light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D HM1_0686 bchN; light-independent protochlorophyllide reductase, n subunit K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D HM1_0685 bchB; light-independent protochlorophyllide reductase, b subunit K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D HM1_0692 bchG; bacteriochlorophyll synthetase bchg K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D HM1_0659 bchX; chlorophyllide reductase iron protein, subunit x K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D HM1_0654 bchY; chlorophyllide reductase 52.5 kda chain, subunit y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D HM1_0655 bchZ; chlorophyllide reductase, subunit z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hmo00130]
D HM1_1946 ubiA; 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HM1_1945 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D HM1_2049 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HM1_1944 ubiE; menaquinone biosynthesis methyltransferase ubie K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D HM1_1948 conserved hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D HM1_1947 conserved hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D HM1_1949 conserved hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hmo00900]
D HM1_0295 dxs; 1-deoxy-d-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D HM1_2264 dxr; 1-deoxy-d-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D HM1_1354 ispD; ispd/ispf bifunctional enzyme K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D HM1_0738 ispE; 4-diphosphocytidyl-2c-methyl-d-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D HM1_2266 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D HM1_1931 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_2049 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D HM1_1981 fni; isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D HM1_0293 ispA; geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HM1_1960 heptaprenyl diphosphate synthase component ii, putative K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D HM1_1943 farnesyltranstransferase, putative K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HM1_2261 uppS; undecaprenyl diphosphate synthase, putative K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:hmo00906]
D HM1_0681 crtN; diapophytoene dehydrogenase crtn K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:hmo00907]
D HM1_0072 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HM1_1269 tktC; transketolase, c-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HM1_1268 tktN; transketolase, n terminal half K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D HM1_1175 rfbD; dtdp-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HM1_2490 beta-lactamase protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:hmo00332]
D HM1_2703 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HM1_2702 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:hmo00261]
D HM1_1168 cysNC; sulfate adenylate transferase, large subunit/adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D HM1_1167 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D HM1_2331 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HM1_1939 asparate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HM1_2330 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HM1_2332 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HM1_2327 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hmo00521]
D HM1_0763 hexokinase, putative K00844 HK; hexokinase [EC:2.7.1.1]
D HM1_1175 rfbD; dtdp-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HM1_0763 hexokinase, putative K00844 HK; hexokinase [EC:2.7.1.1]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:hmo00401]
D HM1_1926 tyrA; prephenate dehydrogenase, putative K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HM1_3049 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D HM1_1916 trpE; anthranilate synthase component i K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HM1_1917 trpG; anthranilate synthase component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HM1_2164 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HM1_1246 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HM1_2165 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HM1_2166 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hmo00999]
D HM1_2130 metK; s-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HM1_0245 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
D HM1_1788 aroB; 3-dehydroquinate synthase, putative K17835 griH; 3-amino-4-hydroxybenzoic acid synthase [EC:4.1.99.20]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:hmo00362]
D HM1_0853 pcaD; 3-oxoadipate enol-lactonase, putative K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D HM1_0652 hydrolase, alpha/beta fold family, putative K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D HM1_0072 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D HM1_2175 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D HM1_0073 3-hydroxyacyl-coa dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D HM1_0379 biotin carboxyl carrier protein, putative K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D HM1_0895 hbd; 3-hydroxybutyryl-coa dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D HM1_2049 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:hmo00625]
D HM1_2632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HM1_0864 nifK; dinitrogenase molybdenum-iron protein beta subunit nifk K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D HM1_0866 nifH; dinitrogenase iron protein nifh K02588 nifH; nitrogenase iron protein NifH
D HM1_0865 nifD; dinitrogenase molybdenum-iron protein alpha subunit nifd K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D HM1_2175 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
D HM1_0206 uptake [ni/fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D HM1_1479 uptake [ni/fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D HM1_0205 uptake [ni/fe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D HM1_1478 uptake [ni/fe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D HM1_0072 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D HM1_2175 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:hmo00626]
D HM1_2632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hmo03020]
D HM1_1370 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HM1_1371 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HM1_1407 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HM1_2128 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HM1_1067 rpoE; DNA-directed RNA polymerase delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hmo03010]
D HM1_1931 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D HM1_2256 rpsB; 30S ribosomal protein s2 K02967 RP-S2; small subunit ribosomal protein S2
D HM1_1384 rpsC; 30S ribosomal protein s3 K02982 RP-S3; small subunit ribosomal protein S3
D HM1_1406 rpsD; 30S ribosomal protein s4 K02986 RP-S4; small subunit ribosomal protein S4
D HM1_1395 rpsE; 30S ribosomal protein s5 K02988 RP-S5; small subunit ribosomal protein S5
D HM1_1697 rpsF; 30S ribosomal protein s6 K02990 RP-S6; small subunit ribosomal protein S6
D HM1_1374 rpsG; 30S ribosomal protein s7 K02992 RP-S7; small subunit ribosomal protein S7
D HM1_1392 rpsH; 30S ribosomal protein s8 K02994 RP-S8; small subunit ribosomal protein S8
D HM1_1414 rpsI; 30S ribosomal protein s9 K02996 RP-S9; small subunit ribosomal protein S9
D HM1_1377 rpsJ; 30S ribosomal protein s10 K02946 RP-S10; small subunit ribosomal protein S10
D HM1_1405 rpsK; 30S ribosomal protein s11 K02948 RP-S11; small subunit ribosomal protein S11
D HM1_1373 rpsL; 30S ribosomal protein s12 K02950 RP-S12; small subunit ribosomal protein S12
D HM1_1404 rpsM; 30S ribosomal protein s13 K02952 RP-S13; small subunit ribosomal protein S13
D HM1_1391 rpsN; 30S ribosomal protein s14 K02954 RP-S14; small subunit ribosomal protein S14
D HM1_2321 rpsO; 30S ribosomal protein s15 K02956 RP-S15; small subunit ribosomal protein S15
D HM1_2183 rpsP; 30S ribosomal protein s16 K02959 RP-S16; small subunit ribosomal protein S16
D HM1_1387 rpsQ; 30S ribosomal protein s17 K02961 RP-S17; small subunit ribosomal protein S17
D HM1_1696 rpsR; 30S ribosomal protein s18 K02963 RP-S18; small subunit ribosomal protein S18
D HM1_1382 rpsS; 30S ribosomal protein s19 K02965 RP-S19; small subunit ribosomal protein S19
D HM1_2427 rpsT; 30S ribosomal protein s20 K02968 RP-S20; small subunit ribosomal protein S20
D HM1_1366 rplA; 50S ribosomal protein l1 K02863 RP-L1; large subunit ribosomal protein L1
D HM1_1381 rplB; 50S ribosomal protein l2 K02886 RP-L2; large subunit ribosomal protein L2
D HM1_1378 rplC; 50S ribosomal protein l3 K02906 RP-L3; large subunit ribosomal protein L3
D HM1_1379 rplD; 50S ribosomal protein l4 K02926 RP-L4; large subunit ribosomal protein L4
D HM1_1390 rplE; 50S ribosomal protein l5 K02931 RP-L5; large subunit ribosomal protein L5
D HM1_1393 rplF; 50S ribosomal protein l6 K02933 RP-L6; large subunit ribosomal protein L6
D HM1_1368 rplL; 50S ribosomal protein l7/l12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HM1_0973 rplI; 50S ribosomal protein l9 K02939 RP-L9; large subunit ribosomal protein L9
D HM1_1367 rplJ; 50S ribosomal protein l10 K02864 RP-L10; large subunit ribosomal protein L10
D HM1_1365 rplK; 50S ribosomal protein l11 K02867 RP-L11; large subunit ribosomal protein L11
D HM1_1413 rplM; 50S ribosomal protein l13 K02871 RP-L13; large subunit ribosomal protein L13
D HM1_1388 rplN; 50S ribosomal protein l14 K02874 RP-L14; large subunit ribosomal protein L14
D HM1_1397 rplO; 50S ribosomal protein l15 K02876 RP-L15; large subunit ribosomal protein L15
D HM1_1385 rplP; 50S ribosomal protein l16 K02878 RP-L16; large subunit ribosomal protein L16
D HM1_1408 rplQ; 50S ribosomal protein l17 K02879 RP-L17; large subunit ribosomal protein L17
D HM1_1394 rplR; 50S ribosomal protein l18 K02881 RP-L18; large subunit ribosomal protein L18
D HM1_2188 rplS; 50S ribosomal protein l19 K02884 RP-L19; large subunit ribosomal protein L19
D HM1_1791 rplT; 50S ribosomal protein l20 K02887 RP-L20; large subunit ribosomal protein L20
D HM1_2711 rplU; 50S ribosomal protein l21 K02888 RP-L21; large subunit ribosomal protein L21
D HM1_1383 rplV; 50S ribosomal protein l22 K02890 RP-L22; large subunit ribosomal protein L22
D HM1_1380 rplW; 50S ribosomal protein l23 K02892 RP-L23; large subunit ribosomal protein L23
D HM1_1389 rplX; 50S ribosomal protein l24 K02895 RP-L24; large subunit ribosomal protein L24
D HM1_0725 ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 K02897 RP-L25; large subunit ribosomal protein L25
D HM1_2709 rpmA; 50S ribosomal protein l27 K02899 RP-L27; large subunit ribosomal protein L27
D HM1_2147 rpmB; 50S ribosomal protein l28 K02902 RP-L28; large subunit ribosomal protein L28
D HM1_1386 rpmC; 50S ribosomal protein l29 K02904 RP-L29; large subunit ribosomal protein L29
D HM1_1396 rpmD; 50S ribosomal protein l30 K02907 RP-L30; large subunit ribosomal protein L30
D HM1_1081 rpmE; 50S ribosomal protein l31 K02909 RP-L31; large subunit ribosomal protein L31
D HM1_2159 rpmF; 50S ribosomal protein l32 K02911 RP-L32; large subunit ribosomal protein L32
D HM1_1362 rpmG; 50S ribosomal protein l33 K02913 RP-L33; large subunit ribosomal protein L33
D HM1_0907 rpmH; 50S ribosomal protein l34 K02914 RP-L34; large subunit ribosomal protein L34
D HM1_1790 rpmI; 50S ribosomal protein l35 K02916 RP-L35; large subunit ribosomal protein L35
D HM1_1403 rpmJ; 50S ribosomal protein l36 K02919 RP-L36; large subunit ribosomal protein L36
D HM1_1372 ribosomal protein, l7ae family K07590 RP-L7A; large subunit ribosomal protein L7A
D HM1_1006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_3087 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2286 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2354 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_1815 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_0562 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_0876 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2833 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_3083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2829 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_1009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2289 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_1819 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2357 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_0873 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_0565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_0563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_1816 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_0875 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2355 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_3085 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2832 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_1007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2287 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hmo00970]
D HM1_0564 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_3084 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_2288 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_0874 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_1008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_1818 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_2830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_0801 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_0468 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_0827 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_0828 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_2307 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_2838 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_1003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_2347 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_1334 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HM1_2843 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HM1_1820 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HM1_2358 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HM1_0570 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HM1_2302 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HM1_0979 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HM1_1759 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HM1_2294 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HM1_2849 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HM1_1763 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HM1_0566 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HM1_2846 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HM1_2298 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HM1_2592 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HM1_0568 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_2844 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_2300 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_0978 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_0705 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_2589 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_2839 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2306 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_0121 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2594 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2835 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2526 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2292 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_1761 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2293 tRNA-His K14226 tRNA-His; tRNA His
D HM1_2595 tRNA-His K14226 tRNA-His; tRNA His
D HM1_1817 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HM1_2831 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HM1_1764 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_0469 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2528 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2522 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2492 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_0122 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2305 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2836 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_0567 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HM1_2299 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HM1_2593 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HM1_2845 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HM1_0707 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_2519 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_2840 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_0708 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_1821 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_2359 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_2842 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_1996 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_1760 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HM1_2590 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HM1_2296 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HM1_0467 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2304 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_0398 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2837 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2531 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2291 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2303 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_2841 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_0845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_0825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_2290 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_0815 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_2523 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_2308 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_1496 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_0124 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_2479 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_1004 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HM1_2524 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HM1_0397 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HM1_2297 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HM1_2847 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HM1_2591 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HM1_0569 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2301 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2529 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2295 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2518 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2346 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2848 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_0934 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HM1_2791 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HM1_1355 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HM1_3025 gatA; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase, a subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HM1_3024 gatB; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase, b subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HM1_3026 gatC; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase, c subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HM1_1023 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HM1_0530 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HM1_1848 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HM1_2457 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HM1_2458 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HM1_1780 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HM1_0850 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HM1_2507 selA; l-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D HM1_1357 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HM1_0752 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HM1_2133 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HM1_2749 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HM1_2677 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HM1_2096 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HM1_0643 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HM1_1065 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HM1_2267 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HM1_1847 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HM1_1797 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HM1_1798 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HM1_1812 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HM1_1883 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hmo03060]
D HM1_1398 secY; preprotein translocase, secy subunit K03076 secY; preprotein translocase subunit SecY
D HM1_1363 secE; sece subunit of protein translocation complex, putative K03073 secE; preprotein translocase subunit SecE
D HM1_1317 secG; preprotein translocase, secg subunit K03075 secG; preprotein translocase subunit SecG
D HM1_1840 secD; protein-export membrane protein secd K03072 secD; preprotein translocase subunit SecD
D HM1_1841 secF; protein-export membrane protein secf K03074 secF; preprotein translocase subunit SecF
D HM1_1837 yajC; preprotein translocase, yajc subunit K03210 yajC; preprotein translocase subunit YajC
D HM1_0910 spoIIIJ; stage iii sporulation protein j/oxaa-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HM1_1266 secA; preprotein translocase, seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HM1_2182 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HM1_2174 ftsY; signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D HM1_1959 twin-arginine translocation domain protein K03116 tatA; sec-independent protein translocase protein TatA
D HM1_3059 twin-arginine translocation domain protein K03116 tatA; sec-independent protein translocase protein TatA
D HM1_1319 twin-arginine translocation protein tatb K03117 tatB; sec-independent protein translocase protein TatB
D HM1_1950 tatC; sec-independent protein translocase tatc K03118 tatC; sec-independent protein translocase protein TatC
D HM1_2189 lepB; signal peptidase i K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HM1_2103 lspA; signal peptidase ii K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hmo04122]
D HM1_1864 nifS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HM1_1866 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HM1_0064 moaA; molybdenum cofactor biosynthesis protein a K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D HM1_0944 thiS; molybdopterin converting factor, this protein family, putative K03636 moaD; sulfur-carrier protein
D HM1_2048 moeB; molybdopterin biosynthesis protein moeb, putative K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D HM1_0063 moaC; molybdenum cofactor biosynthesis protein c K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D HM1_0061 molybdenum cofactor biosynthesis protein, putative K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D HM1_2032 thiS; thiamine biosynthesis protein, this K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:hmo03018]
D HM1_1605 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_1316 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_2322 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HM1_2374 dead/deah box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HM1_2379 conserved hypothetical protein, contains hdig, hd and kh domains K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HM1_2413 metallo-beta-lactamase family protein, putative K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HM1_2334 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HM1_0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HM1_2437 dnaK; chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D HM1_1422 groEL; chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HM1_2580 hfq; RNA chaperone hfq K03666 hfq; host factor-I protein
D HM1_0232 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hmo03030]
D HM1_0408 DNA polymerase iii polc-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HM1_0084 dnaE; DNA polymerase iii alpha subunit, putative K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HM1_2272 polC; DNA polymerase iii, alpha subunit, gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HM1_0813 dnaX; DNA polymerase iii gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HM1_0758 holB; DNA polymerase iii delta prime subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HM1_2426 holA; DNA polymerase iii, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HM1_0904 dnaN; DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HM1_0975 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HM1_1994 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HM1_0970 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HM1_2808 rnhA; ribonuclease h K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HM1_2192 rnhB; ribonuclease hii K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HM1_1748 polA; DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HM1_3028 ligA; DNA ligase, nad-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hmo03410]
D HM1_2794 nth; endonuclease iii K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HM1_1749 mutM; formamidopyrimidine-dna glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HM1_0112 ap endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HM1_1748 polA; DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HM1_2535 recJ; single-stranded-DNA-specific exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HM1_3028 ligA; DNA ligase, nad-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hmo03420]
D HM1_0721 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HM1_1297 uvrA; excinuclease abc, a subunit K03701 uvrA; excinuclease ABC subunit A
D HM1_1293 uvrB; excinuclease abc, b subunit K03702 uvrB; excinuclease ABC subunit B
D HM1_1301 uvrC; excinuclease abc, c subunit K03703 uvrC; excinuclease ABC subunit C
D HM1_3029 pcrA; ATP-dependent DNA helicase pcra K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HM1_1748 polA; DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HM1_3028 ligA; DNA ligase, nad-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hmo03430]
D HM1_2585 mutS; DNA mismatch repair protein muts K03555 mutS; DNA mismatch repair protein MutS
D HM1_1805 muts2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D HM1_2583 mutL; DNA mismatch repair protein mutl K03572 mutL; DNA mismatch repair protein MutL
D HM1_3029 pcrA; ATP-dependent DNA helicase pcra K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HM1_0291 xseA; exodeoxyribonuclease vii, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HM1_0292 xseB; exodeoxyribonuclease vii, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HM1_2535 recJ; single-stranded-DNA-specific exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HM1_0970 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HM1_0084 dnaE; DNA polymerase iii alpha subunit, putative K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HM1_2272 polC; DNA polymerase iii, alpha subunit, gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HM1_0904 dnaN; DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HM1_0813 dnaX; DNA polymerase iii gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HM1_2426 holA; DNA polymerase iii, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HM1_0758 holB; DNA polymerase iii delta prime subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HM1_0408 DNA polymerase iii polc-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HM1_3028 ligA; DNA ligase, nad-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HM1_0574 dam; d12 class n6 adenine-specific DNA methyltransferase superfamily K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HM1_1715 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:hmo03440]
D HM1_2535 recJ; single-stranded-DNA-specific exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HM1_0970 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HM1_0903 recF; DNA replication and repair protein recf K03629 recF; DNA replication and repair protein RecF
D HM1_2453 recO; DNA repair protein reco K03584 recO; DNA repair protein RecO (recombination protein O)
D HM1_0809 recR; recombination protein recr K06187 recR; recombination protein RecR
D HM1_2377 recA; reca protein K03553 recA; recombination protein RecA
D HM1_1748 polA; DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HM1_1828 ruvA; holliday junction DNA helicase ruva K03550 ruvA; holliday junction DNA helicase RuvA
D HM1_1829 ruvB; holliday junction DNA helicase ruvb K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HM1_1827 ruvC; crossover junction endodeoxyribonuclease ruvc K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HM1_2150 recG; ATP-dependent DNA helicase recg, putative K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HM1_3141 exodeoxyribonuclease V, alpha chain, RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HM1_0084 dnaE; DNA polymerase iii alpha subunit, putative K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HM1_2272 polC; DNA polymerase iii, alpha subunit, gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HM1_0904 dnaN; DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HM1_0813 dnaX; DNA polymerase iii gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HM1_2426 holA; DNA polymerase iii, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HM1_0758 holB; DNA polymerase iii delta prime subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HM1_0408 DNA polymerase iii polc-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HM1_2131 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:hmo03450]
D HM1_3135 Ku domain protein K10979 ku; DNA end-binding protein Ku
D HM1_3130 conserved domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hmo02010]
D HM1_1170 sulfate abc transporter, sulfate-binding protein, putative K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D HM1_1171 cysT; sulfate abc transporter, permease protein cyst, putative K02046 cysU; sulfate/thiosulfate transport system permease protein
D HM1_1172 sulfate abc transporter, permease protein cysw K02047 cysW; sulfate/thiosulfate transport system permease protein
D HM1_1174 cysA; sulfate/thiosulfate import ATP-binding protein cysa, putative K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HM1_0336 tungstate abc transporter permease K05772 tupA; tungstate transport system substrate-binding protein
D HM1_0334 abc transporter, substrate-binding protein K05773 tupB; tungstate transport system permease protein
D HM1_0335 abc transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D HM1_1548 modA; molybdate abc transporter, molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HM1_1550 modB; molybdate abc transporter, permease protein K02018 modB; molybdate transport system permease protein
D HM1_1549 abc transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HM1_2279 spermidine/putrescine abc transporter, spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HM1_2278 spermidine/putrescine abc transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D HM1_2277 spermidine/putrescine abc transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D HM1_2276 potA; spermidine/putrescine abc transporter, ATP-binding protein pota K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HM1_2695 membrane protein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D HM1_2692 abc transporter, permease protein, putative K23535 nupB; general nucleoside transport system permease protein
D HM1_2691 branched chain amino acid abc transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HM1_2693 abc transporter, abc-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HM1_2420 ribose abc transporter, ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D HM1_2419 rbsC; ribose transport system permease protein rbsc K10440 rbsC; ribose transport system permease protein
D HM1_2418 rbsA; ribose abc transporter, ATP-binding protein rbsa K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HM1_2417 ribose abc transporter rbsd K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D HM1_2082 pstD; phosphate abc transporter, phosphate-binding protein pstd K02040 pstS; phosphate transport system substrate-binding protein
D HM1_2083 pstC; phosphate abc transporter, permease protein pstc K02037 pstC; phosphate transport system permease protein
D HM1_2084 pstA; phosphate abc transporter, permease protein psta K02038 pstA; phosphate transport system permease protein
D HM1_2085 pstB; phosphate abc transporter, ATP-binding protein pstb K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HM1_1261 glutamine abc transporter, glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D HM1_1262 glutamine abc transporter, permease protein K10037 glnP; glutamine transport system permease protein
D HM1_1263 glutamine abc transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HM1_0170 glutamine abc transporter, glutamine-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D HM1_0174 glutamine abc transporter, glutamine-binding protein, putative K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D HM1_0173 glutamine abc transporter, glutamine-binding protein, putative K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D HM1_0169 glnQ; glutamine abc transporter, ATP-binding protein glnq K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HM1_0489 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0490 branched chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0883 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0884 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0925 branched-chain amino acid abc transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0115 branched chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0491 branched-chain amino acid abc transporter, permease component K01997 livH; branched-chain amino acid transport system permease protein
D HM1_0885 branched chain amino acid abc transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HM1_0492 branched-chain amino acid abc transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HM1_0886 branched-chain amino acid abc transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HM1_0493 branched chain amino acid abc transporter, putative K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HM1_0887 branched chain amino acid abc transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HM1_0494 branched-chain amino acid abc transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HM1_0888 branched chain amino acid abc transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HM1_0767 adcA; zinc-binding lipoprotein adca K09815 znuA; zinc transport system substrate-binding protein
D HM1_2422 abc 3 transport family protein K09816 znuB; zinc transport system permease protein
D HM1_2421 abc transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HM1_0212 cbiN; cobalt transport protein cbin K02009 cbiN; cobalt/nickel transport protein
D HM1_0213 cbiM; cobalamin biosynthesis protein cbim K02007 cbiM; cobalt/nickel transport system permease protein
D HM1_3002 cbiM; cobalamin biosynthesis protein cbim K02007 cbiM; cobalt/nickel transport system permease protein
D HM1_0209 cbiQ; cobalt abc transporter, permease protein cbiq K02008 cbiQ; cobalt/nickel transport system permease protein
D HM1_3001 cbiQ; cobalt abc transporter, permease protein cbiq K02008 cbiQ; cobalt/nickel transport system permease protein
D HM1_0208 cbiO; cobalt transport protein ATP-binding subunit cbio K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HM1_3000 cbiO; cobalt abc transporter, ATPase subunit cbio K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HM1_3139 biotin synthesis BioY protein K03523 bioY; biotin transport system substrate-specific component
D HM1_0393 bioY; biotin synthesis protein, bioy K03523 bioY; biotin transport system substrate-specific component
D HM1_1411 cbiQ; cobalt transport protein, cbiq putative K16785 ecfT; energy-coupling factor transport system permease protein
D HM1_0773 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D HM1_1858 cbiQ; cobalt transport protein, cbiq putative K16785 ecfT; energy-coupling factor transport system permease protein
D HM1_1409 cbiO; cobalt import ATP-binding protein cbio 2 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_0775 abc transporter K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_0774 cobalt abc transporter, ATP-binding component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_1410 cbiO; cobalt import ATP-binding protein cbio 1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_1647 hypothetical protein K19310 bcrB; bacitracin transport system permease protein
D HM1_1646 bcrA; bacitracin abc transporter K19309 bcrA; bacitracin transport system ATP-binding protein
D HM1_1271 ftsX; cell division protein ftsx, putative K09811 ftsX; cell division transport system permease protein
D HM1_1270 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D HM1_2685 abc transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HM1_2686 abc transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:hmo02060]
D HM1_0836 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HM1_0837 phosphocarrier protein hpr, putative K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:hmo03070]
D HM1_1132 hypothetical protein K12340 tolC; outer membrane protein
D HM1_0260 xcpT; general secretion pathway protein g K02456 gspG; general secretion pathway protein G
D HM1_1840 secD; protein-export membrane protein secd K03072 secD; preprotein translocase subunit SecD
D HM1_1841 secF; protein-export membrane protein secf K03074 secF; preprotein translocase subunit SecF
D HM1_1363 secE; sece subunit of protein translocation complex, putative K03073 secE; preprotein translocase subunit SecE
D HM1_1317 secG; preprotein translocase, secg subunit K03075 secG; preprotein translocase subunit SecG
D HM1_1398 secY; preprotein translocase, secy subunit K03076 secY; preprotein translocase subunit SecY
D HM1_1837 yajC; preprotein translocase, yajc subunit K03210 yajC; preprotein translocase subunit YajC
D HM1_0910 spoIIIJ; stage iii sporulation protein j/oxaa-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HM1_1266 secA; preprotein translocase, seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HM1_2174 ftsY; signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D HM1_2182 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HM1_1959 twin-arginine translocation domain protein K03116 tatA; sec-independent protein translocase protein TatA
D HM1_3059 twin-arginine translocation domain protein K03116 tatA; sec-independent protein translocase protein TatA
D HM1_1319 twin-arginine translocation protein tatb K03117 tatB; sec-independent protein translocase protein TatB
D HM1_1950 tatC; sec-independent protein translocase tatc K03118 tatC; sec-independent protein translocase protein TatC
D HM1_0622 trag/trad family protein, putative K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hmo02020]
D HM1_2079 signal transduction histidine kinase, putative K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HM1_2078 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D HM1_2777 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HM1_2082 pstD; phosphate abc transporter, phosphate-binding protein pstd K02040 pstS; phosphate transport system substrate-binding protein
D HM1_0990 serine protease do, putative K04771 degP; serine protease Do [EC:3.4.21.107]
D HM1_2812 serine protease do, putative K04771 degP; serine protease Do [EC:3.4.21.107]
D HM1_1250 hag; flagellin protein K02406 fliC; flagellin
D HM1_1210 fliC; flagellin protein flic K02406 fliC; flagellin
D HM1_2251 fliA; RNA polymerase sigma factor, flia/whig family K02405 fliA; RNA polymerase sigma factor FliA
D HM1_1504 motA; flagellar motor component mota, putative K02556 motA; chemotaxis protein MotA
D HM1_2813 resD; two-component response regulator resd K07775 resD; two-component system, OmpR family, response regulator ResD
D HM1_1809 transcriptional regulator, putative K07775 resD; two-component system, OmpR family, response regulator ResD
D HM1_0905 dnaA; chromosomal replication initiator protein dnaa K02313 dnaA; chromosomal replication initiator protein
D HM1_1536 signal transduction histidine kinase, putative K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HM1_1059 sensor histidine kinase domain protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_1619 sensor histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_2587 signal transduction histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_1074 response regulator receiver domain protein, putative K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D HM1_1714 spo0F; stage 0 sporulation protein f, putative K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D HM1_0304 spo0A; stage 0 sporulation protein a K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D HM1_2666 sensor protein lyts K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D HM1_2665 sensory transduction protein lytt K07705 lytT; two-component system, LytTR family, response regulator LytT
D HM1_1209 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D HM1_1195 sensor histidine kinase, putative K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D HM1_0585 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D HM1_0587 type ii/iv secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HM1_0742 nitrogen regulatory protein p-ii K04751 glnB; nitrogen regulatory protein P-II 1
D HM1_0068 nitrogen regulatory protein p-ii K04751 glnB; nitrogen regulatory protein P-II 1
D HM1_2353 glnA; glutamine synthetase, type i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HM1_1290 sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D HM1_0404 two component, sigma54 specific, transcriptional regulator, fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_1310 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D HM1_0205 uptake [ni/fe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D HM1_1478 uptake [ni/fe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D HM1_0206 uptake [ni/fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D HM1_1479 uptake [ni/fe] hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D HM1_0207 cybH; ni/fe-hydrogenase, b-type cytochrome subunit, putative K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D HM1_1480 cybH; ni/fe-hydrogenase, b-type cytochrome subunit, putative K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D HM1_2463 cheR; chemotaxis protein methyltransferase cher, putative K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HM1_2023 methylase of chemotaxis methyl-accepting protein, putative K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HM1_0196 sensory transduction histidine kinase, putative K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D HM1_0306 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_2786 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0497 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0164 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0843 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_1418 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_1661 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0556 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_2119 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_3092 methyl-accepting chemotaxis signaling protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_1703 cheW; purine-binding chemotaxis protein chew K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_2248 cheW; purine-binding chemotaxis protein chew K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_2024 chew-like family protein K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_1415 cheW; purine-binding chemotaxis protein chew, putative K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_2626 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2026 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2247 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_1416 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2237 cheY; response regulator receiver domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2020 two-component response regulator, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2627 cheY; response regulator receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2246 cheB; chemotaxis response regulator protein-glutamate methylesterase, cheb, putative K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HM1_2027 cheB; chemotaxis response regulator protein-glutamate methylesterase, cheb K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HM1_1063 transcriptional regulator, crp/fnr family, putative K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HM1_1803 cydA; cytochrome bd ubiquinol oxidase, subunit i K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D HM1_1802 cydB; cytochrome bd ubiquinol oxidase, subunit ii K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D HM1_1132 hypothetical protein K12340 tolC; outer membrane protein
D HM1_1094 udp-n-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HM1_2022 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D HM1_0558 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D HM1_1201 flgM; negative regulator of flagellin synthesis, flgm, putative K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hmo02024]
D HM1_2580 hfq; RNA chaperone hfq K03666 hfq; host factor-I protein
D HM1_1916 trpE; anthranilate synthase component i K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HM1_1917 trpG; anthranilate synthase component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HM1_0489 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0490 branched chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0883 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0884 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0925 branched-chain amino acid abc transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0115 branched chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0491 branched-chain amino acid abc transporter, permease component K01997 livH; branched-chain amino acid transport system permease protein
D HM1_0885 branched chain amino acid abc transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HM1_0492 branched-chain amino acid abc transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HM1_0886 branched-chain amino acid abc transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HM1_0493 branched chain amino acid abc transporter, putative K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HM1_0887 branched chain amino acid abc transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HM1_0494 branched-chain amino acid abc transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HM1_0888 branched chain amino acid abc transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HM1_0578 conserved hypothetical protein K20276 bapA; large repetitive protein
D HM1_0142 multidomain protein with s-layer homology region, ig domain, f5/8 domain, fibronectin domain K20276 bapA; large repetitive protein
D HM1_0075 lcfA; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_0197 fadD; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_1063 transcriptional regulator, crp/fnr family, putative K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HM1_2141 ribD; riboflavin biosynthesis protein ribd K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HM1_0431 efflux transporter, rnd family, mfp subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D HM1_1536 signal transduction histidine kinase, putative K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HM1_1873 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HM1_1874 peptide abc transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HM1_1875 peptide abc transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HM1_1876 oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HM1_0910 spoIIIJ; stage iii sporulation protein j/oxaa-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HM1_1363 secE; sece subunit of protein translocation complex, putative K03073 secE; preprotein translocase subunit SecE
D HM1_1317 secG; preprotein translocase, secg subunit K03075 secG; preprotein translocase subunit SecG
D HM1_1398 secY; preprotein translocase, secy subunit K03076 secY; preprotein translocase subunit SecY
D HM1_1837 yajC; preprotein translocase, yajc subunit K03210 yajC; preprotein translocase subunit YajC
D HM1_1266 secA; preprotein translocase, seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HM1_2174 ftsY; signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D HM1_2182 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HM1_1074 response regulator receiver domain protein, putative K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D HM1_1714 spo0F; stage 0 sporulation protein f, putative K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D HM1_0304 spo0A; stage 0 sporulation protein a K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D HM1_3138 phospholipase C zinc-binding domain protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hmo02030]
D HM1_0306 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_2786 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0497 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0164 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0843 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_1418 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_1661 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0556 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_2119 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_3092 methyl-accepting chemotaxis signaling protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_2420 ribose abc transporter, ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D HM1_2626 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2026 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2247 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_1416 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_1703 cheW; purine-binding chemotaxis protein chew K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_2248 cheW; purine-binding chemotaxis protein chew K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_2024 chew-like family protein K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_1415 cheW; purine-binding chemotaxis protein chew, putative K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_2237 cheY; response regulator receiver domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2020 two-component response regulator, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2627 cheY; response regulator receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_1953 cheC; chemotaxis protein chec K03410 cheC; chemotaxis protein CheC
D HM1_2021 chec-like family protein K03410 cheC; chemotaxis protein CheC
D HM1_0441 cheC; chemotaxis protein chec K03410 cheC; chemotaxis protein CheC
D HM1_2246 cheB; chemotaxis response regulator protein-glutamate methylesterase, cheb, putative K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HM1_2027 cheB; chemotaxis response regulator protein-glutamate methylesterase, cheb K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HM1_0196 sensory transduction histidine kinase, putative K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D HM1_1954 cheD; chemotaxis protein ched K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D HM1_2249 cheD; chemotaxis protein ched K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D HM1_2463 cheR; chemotaxis protein methyltransferase cher, putative K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HM1_2023 methylase of chemotaxis methyl-accepting protein, putative K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HM1_2222 fliG; flagellar motor switch protein flig K02410 fliG; flagellar motor switch protein FliG
D HM1_2233 fliM; flagellar motor switch protein flim K02416 fliM; flagellar motor switch protein FliM
D HM1_2236 fliN; flagellar motor switch protein flin, putative K02417 fliN; flagellar motor switch protein FliN
D HM1_1504 motA; flagellar motor component mota, putative K02556 motA; chemotaxis protein MotA
D HM1_1505 motB; flagellar motor protein motb, putative K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:hmo02040]
D HM1_2220 fliE; flagellar hook-basal body complex protein flie, putative K02408 fliE; flagellar hook-basal body complex protein FliE
D HM1_2221 fliF; flagellar m-ring protein flif, putative K02409 fliF; flagellar M-ring protein FliF
D HM1_2222 fliG; flagellar motor switch protein flig K02410 fliG; flagellar motor switch protein FliG
D HM1_2223 fliH; flagellar assembly protein flih, putative K02411 fliH; flagellar assembly protein FliH
D HM1_2224 fliI; flagellar protein export ATPase flii, putative K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HM1_2225 fliJ; flagellar export protein flij, putative K02413 fliJ; flagellar protein FliJ
D HM1_2227 fliK; flagellar hook-length control protein flik, putative K02414 fliK; flagellar hook-length control protein FliK
D HM1_2232 fliL; flagellar basal body-associated protein flil, putative K02415 fliL; flagellar protein FliL
D HM1_2233 fliM; flagellar motor switch protein flim K02416 fliM; flagellar motor switch protein FliM
D HM1_2236 fliN; flagellar motor switch protein flin, putative K02417 fliN; flagellar motor switch protein FliN
D HM1_2238 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D HM1_2239 fliP; flagellar biosynthetic protein flip K02419 fliP; flagellar biosynthesis protein FliP
D HM1_2240 fliQ; flagellar biosynthetic protein fliq, putative K02420 fliQ; flagellar biosynthesis protein FliQ
D HM1_2241 fliR; flagellar biosynthetic protein flir K02421 fliR; flagellar biosynthesis protein FliR
D HM1_2243 flhA; flagellar biosynthesis protein flha K02400 flhA; flagellar biosynthesis protein FlhA
D HM1_2242 flhB; flagellar biosynthetic protein flhb, putative K02401 flhB; flagellar biosynthesis protein FlhB
D HM1_2218 flgB; flagellar basal-body rod protein flgb, putative K02387 flgB; flagellar basal-body rod protein FlgB
D HM1_2219 flgC; flagellar basal-body rod protein flgc, putative K02388 flgC; flagellar basal-body rod protein FlgC
D HM1_2228 flagellar hook capping protein, putative K02389 flgD; flagellar basal-body rod modification protein FlgD
D HM1_2230 flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D HM1_1116 flagellar basal-body rod protein, putative K02391 flgF; flagellar basal-body rod protein FlgF
D HM1_1117 flgG; flagellar basal-body rod protein flgg, putative K02392 flgG; flagellar basal-body rod protein FlgG
D HM1_0498 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D HM1_1205 flgK; flagellar hook-associated protein flgk, putative K02396 flgK; flagellar hook-associated protein 1
D HM1_1206 flgL; flagellar hook-associated protein 3, putative K02397 flgL; flagellar hook-associated protein 3 FlgL
D HM1_1250 hag; flagellin protein K02406 fliC; flagellin
D HM1_1210 fliC; flagellin protein flic K02406 fliC; flagellin
D HM1_1627 filD; flagellar hook-associated protein 2, putative K02407 fliD; flagellar hook-associated protein 2
D HM1_1211 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D HM1_1251 fliS; flagellar protein flis K02422 fliS; flagellar secretion chaperone FliS
D HM1_1213 fliS; flagellar protein flis K02422 fliS; flagellar secretion chaperone FliS
D HM1_1504 motA; flagellar motor component mota, putative K02556 motA; chemotaxis protein MotA
D HM1_1505 motB; flagellar motor protein motb, putative K02557 motB; chemotaxis protein MotB
D HM1_1201 flgM; negative regulator of flagellin synthesis, flgm, putative K02398 flgM; negative regulator of flagellin synthesis FlgM
D HM1_1995 rpoD; RNA polymerase sigma factor rpod K03086 rpoD; RNA polymerase primary sigma factor
D HM1_1310 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D HM1_2251 fliA; RNA polymerase sigma factor, flia/whig family K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HM1_1605 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_1316 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:hmo04980]
D HM1_2750 lao/ao transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D HM1_1721 5-methyltetrahydrofolate--homocysteine s-methyltransferase, putative K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D HM1_2499 metH; methionine synthase, putative K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hmo01501]
D HM1_2907 peptidase m56, blar1 domain protein K02172 blaR1; bla regulator protein blaR1
D HM1_2920 peptidase m56, blar1 domain protein K02172 blaR1; bla regulator protein blaR1
D HM1_2921 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D HM1_2490 beta-lactamase protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HM1_1132 hypothetical protein K12340 tolC; outer membrane protein
D HM1_1810 penicillin-binding protein 1a/1b family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HM1_1892 mrcA; penicillin-binding protein 1a K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HM1_2727 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:hmo01502]
D HM1_2570 ddl; d-alanine--d-alanine ligase, putative K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HM1_1707 alr; alanine racemase, putative K01775 alr; alanine racemase [EC:5.1.1.1]
D HM1_1070 alr; alanine racemase, putative K01775 alr; alanine racemase [EC:5.1.1.1]
D HM1_2055 murF; udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate-d-alanyl-d-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HM1_1592 murF; udp-n-acetylmuramoylalanyl-d-glutamyl-2,6-diaminopimelate--d-alanyl-d-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HM1_2056 mraY; phospho-n-acetylmuramoyl-pentapeptide-transferase, putative K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HM1_2059 murG; undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase, putative K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hmo01503]
D HM1_1423 cwlD; n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2806 n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_3102 germination specific n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2720 n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_0990 serine protease do, putative K04771 degP; serine protease Do [EC:3.4.21.107]
D HM1_2812 serine protease do, putative K04771 degP; serine protease Do [EC:3.4.21.107]
D HM1_1132 hypothetical protein K12340 tolC; outer membrane protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hmo01000]
C 01001 Protein kinases [BR:hmo01001]
D HM1_2138 serine/threonine protein kinase, putative K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HM1_1673 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D HM1_2079 signal transduction histidine kinase, putative K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HM1_1536 signal transduction histidine kinase, putative K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HM1_1195 sensor histidine kinase, putative K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D HM1_1059 sensor histidine kinase domain protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_1619 sensor histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_2587 signal transduction histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_2666 sensor protein lyts K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D HM1_1676 lytS; sensor protein lyts K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HM1_1290 sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D HM1_2626 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2026 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2247 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_1416 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2022 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D HM1_0559 signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:hmo01009]
D HM1_2541 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HM1_0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HM1_0015 htpG; heat shock protein htpg K04079 HSP90A; molecular chaperone HtpG
D HM1_2137 protein serine/threonine phosphatase, putative K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D HM1_2542 serB; phosphoserine phosphatase, putative K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:hmo01002]
D HM1_2103 lspA; signal peptidase ii K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HM1_0253 peptidase a24a, prepilin type iv peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HM1_0584 comC; type iv prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HM1_2152 spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D HM1_1481 hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D HM1_2065 spoIIGA; sporulation sigma-e factor-processing peptidase K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D HM1_0057 guaA; gmp synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HM1_1710 glutamine amidotransferase, putative K07010 K07010; putative glutamine amidotransferase
D HM1_2114 cell wall hydrolase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D HM1_3109 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HM1_1037 gltB; glutamate synthase [nadph] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D HM1_1526 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HM1_0486 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D HM1_1489 peptidase c56, pfpi K05520 yhbO; deglycase [EC:3.5.1.124]
D HM1_2986 metal-dependent membrane protease, putative K07052 K07052; CAAX protease family protein
D HM1_0557 pepF; oligoendopeptidase f K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D HM1_2383 renal dipeptidase family protein, putative K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D HM1_0308 pepT; peptidase t K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HM1_1400 map; methionine aminopeptidase, type i K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HM1_2047 peptidase m28, putative K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D HM1_0678 ATP-dependent metalloprotease ftsh K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HM1_2372 vesicle-fusing ATPase, putative K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HM1_2715 peptidase family m50 K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D HM1_2265 peptidase m50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HM1_2039 peptidase m55, d-aminopeptidase, putative K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D HM1_2907 peptidase m56, blar1 domain protein K02172 blaR1; bla regulator protein blaR1
D HM1_2920 peptidase m56, blar1 domain protein K02172 blaR1; bla regulator protein blaR1
D HM1_0990 serine protease do, putative K04771 degP; serine protease Do [EC:3.4.21.107]
D HM1_2812 serine protease do, putative K04771 degP; serine protease Do [EC:3.4.21.107]
D HM1_2600 subtilin family serine protease, putative K01342 aprE; subtilisin [EC:3.4.21.62]
D HM1_2324 dacA; d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HM1_0318 dacA; d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HM1_2881 peptidase s14, clpp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HM1_0471 clpP; ATP-dependent clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HM1_2960 clpP; peptidase s14, clpp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HM1_0474 lonA; ATP-dependent protease la K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HM1_0974 ATP-dependent lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D HM1_0473 lonB; ATP-dependent protease lonb, putative K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D HM1_2569 lexA; lexa repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HM1_0541 lexA; lexa repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HM1_2189 lepB; signal peptidase i K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HM1_1273 carboxyl-terminal-processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HM1_1915 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D HM1_1071 sppA; signal peptide peptidase sppa, 36k type K04773 sppA; protease IV [EC:3.4.21.-]
D HM1_0303 spoIVB; stage iv sporulation protein b K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D HM1_2214 ATP-dependent protease hslv K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D HM1_0537 peptidase, u32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HM1_1804 peptidase u32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HM1_0269 peptidase u62, modulator of DNA gyrase, putative K03592 pmbA; PmbA protein
D HM1_0268 modulator of DNA gyrase, putative K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:hmo01003]
D HM1_0450 glycosyl transferase, family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D HM1_2271 1,2-diacylglycerol 3-glucosyltransferase, putative K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D HM1_0110 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D HM1_1810 penicillin-binding protein 1a/1b family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HM1_1892 mrcA; penicillin-binding protein 1a K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HM1_1123 glycosyl transferase, wecb/taga/cpsf family, putative K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D HM1_1185 undecaprenyl-phosphate n-acetylglucosaminyl 1-phosphatetransferase, putative K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hmo01005]
D HM1_1149 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D HM1_1185 undecaprenyl-phosphate n-acetylglucosaminyl 1-phosphatetransferase, putative K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hmo01011]
D HM1_1109 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_0987 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_2062 murA; udp-n-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HM1_2061 murB; udp-n-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HM1_2060 murC; udp-n-acetylmuramate--alanine ligase, putative K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HM1_2057 murD; udp-n-acetylmuramoylalanine--d-glutamate ligase, putative K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HM1_2054 murE; udp-n-acetylmuramoylalanyl-d-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D HM1_2570 ddl; d-alanine--d-alanine ligase, putative K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HM1_1707 alr; alanine racemase, putative K01775 alr; alanine racemase [EC:5.1.1.1]
D HM1_1070 alr; alanine racemase, putative K01775 alr; alanine racemase [EC:5.1.1.1]
D HM1_0460 murI; glutamate racemase, putative K01776 murI; glutamate racemase [EC:5.1.1.3]
D HM1_2056 mraY; phospho-n-acetylmuramoyl-pentapeptide-transferase, putative K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HM1_2059 murG; undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase, putative K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HM1_1680 undecaprenol diphosphatase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HM1_2430 mviN; integral membrane protein mvin K03980 murJ; putative peptidoglycan lipid II flippase
D HM1_1591 mviN; integral membrane protein mvin K03980 murJ; putative peptidoglycan lipid II flippase
D HM1_1810 penicillin-binding protein 1a/1b family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HM1_1892 mrcA; penicillin-binding protein 1a K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HM1_2727 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D HM1_2053 spoVD; stage v sporulation protein d K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D HM1_2324 dacA; d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HM1_0318 dacA; d-alanyl-d-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HM1_1753 soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HM1_0536 conserved hypothetical protein tigr00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HM1_2510 cell wall hydrolase, sleb K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D HM1_1110 spoIID; stage ii sporulation protein d K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D HM1_1423 cwlD; n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2806 n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_3102 germination specific n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2720 n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hmo01004]
D HM1_2164 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HM1_2162 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HM1_2168 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HM1_1246 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HM1_2165 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HM1_1184 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HM1_0231 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HM1_2163 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HM1_1628 lipolytic enzyme, g-d-s-l K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D HM1_0951 acsA; acetyl-coenzyme a synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D HM1_0898 acetyl-coenzyme a synthetase family protein, putative K01896 ACSM; medium-chain acyl-CoA synthetase [EC:6.2.1.2]
D HM1_0075 lcfA; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_0197 fadD; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_0093 lcfA; long chain fatty acid acyl-coa ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D HM1_2161 plsX; fatty acid/phospholipid synthesis protein plsx K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HM1_1986 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HM1_2546 membrane protein, putative K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HM1_1929 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:hmo01008]
D HM1_0406 bcsA; chalcone synthase, putative K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D HM1_0405 conserved hypothetical protein K16168 bpsB; methyltransferase
C 01006 Prenyltransferases [BR:hmo01006]
D HM1_0293 ispA; geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HM1_1960 heptaprenyl diphosphate synthase component ii, putative K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D HM1_1943 farnesyltranstransferase, putative K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D HM1_2261 uppS; undecaprenyl diphosphate synthase, putative K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HM1_2581 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HM1_1946 ubiA; 4-hydroxybenzoate polyprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D HM1_0692 bchG; bacteriochlorophyll synthetase bchg K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:hmo01007]
D HM1_2791 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HM1_1023 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HM1_1355 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HM1_1812 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HM1_1883 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HM1_1357 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HM1_1065 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HM1_0752 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HM1_2096 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HM1_2749 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HM1_2677 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HM1_0643 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HM1_1848 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HM1_1847 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HM1_2457 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HM1_2458 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HM1_0850 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HM1_2267 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HM1_1780 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HM1_0530 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HM1_1797 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HM1_1798 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HM1_1327 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D HM1_1642 aspB; aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D HM1_0993 aminotransferase, class i and ii K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D HM1_2384 aspB; aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D HM1_2503 aminotransferase, class i and ii K10907 K10907; aminotransferase [EC:2.6.1.-]
D HM1_3049 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D HM1_1431 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D HM1_1941 oat; ornithine aminotransferase, putative K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D HM1_0395 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D HM1_1972 hemL; glutamate-1-semialdehyde-2,1-aminomutase heml K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D HM1_1510 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_2487 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HM1_2036 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hmo00194]
D HM1_0698 petB; cytochrome b6 subunit of cytochrome bc complex petb K02635 petB; cytochrome b6
D HM1_0699 petC; rieske iron sulfur protein subunit of cytochrome bc complex petc K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D HM1_0697 petD; subunit iv of cytochrome bc complex petd K02637 petD; cytochrome b6-f complex subunit 4
D HM1_1105 atpC; ATP synthase f1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HM1_1104 atpD; ATP synthase f1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HM1_1103 atpG; ATP synthase f1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HM1_1102 atpA; ATP synthase f1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HM1_1101 atpH; ATP synthase f1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HM1_1100 atpF; ATP synthase f0, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HM1_1099 atpE; ATP synthase f0, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HM1_1098 atpB; ATP synthase f0, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HM1_1096 conserved hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hmo03000]
D HM1_2947 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_2858 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_1113 spoIIID; stage iii sporulation protein d K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D HM1_2459 cbs domain protein, putative K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D HM1_3142 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D HM1_0074 transcriptional regulator, tetr family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D HM1_1825 transcriptional regulator, asnc family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HM1_3081 transcriptional regulator, marr family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D HM1_1475 transcriptional regulator, marr family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D HM1_2550 ferric uptake regulator, fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D HM1_2424 ferric uptake regulator, fur family K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D HM1_2044 ferric uptake regulator, fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D HM1_1063 transcriptional regulator, crp/fnr family, putative K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D HM1_0005 transcriptional regulator, crp/fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D HM1_0958 transcriptional regulator, rrf2 family, putative K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D HM1_1863 transcriptional regulator, rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D HM1_0778 transcriptional regulator, arsr family, putative K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HM1_0954 transcriptional regulator, arsr family, putative K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D HM1_3014 transcriptional regulator, arsr family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D HM1_0835 transcriptional regulator, padr family, putative K10947 K10947; PadR family transcriptional regulator
D HM1_1738 transcriptional regulator, padr family K10947 K10947; PadR family transcriptional regulator
D HM1_0313 iron-dependent transcriptional repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D HM1_2921 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D HM1_0663 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HM1_0333 regulatory protein, lysr family, putative K02019 modE; molybdate transport system regulatory protein
D HM1_2745 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D HM1_1275 rex; redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor
D HM1_1740 rex; redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor
D HM1_2216 codY; GTP-sensing transcriptional pleiotropic repressor cody K03706 codY; transcriptional pleiotropic repressor
D HM1_0624 conserved domain protein K07727 K07727; putative transcriptional regulator
D HM1_2930 conserved domain protein K07727 K07727; putative transcriptional regulator
D HM1_1708 helix-turn-helix domain protein, copg family, putative K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D HM1_1700 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HM1_1850 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D HM1_0540 transcriptional regulator, abrb family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D HM1_0754 transcriptional regulator, abrb family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D HM1_1042 transcriptional regulator, abrb family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D HM1_0719 spoVT; stage v sporulation protein t, abrb family transcriptional regulator K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D HM1_0916 parB; chromosome partitioning protein parb, putative K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HM1_1352 transcriptional regulator, card family, putative K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D HM1_1593 glpP; glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D HM1_0300 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D HM1_2434 hrcA; heat-inducible transcription repressor hrca K03705 hrcA; heat-inducible transcriptional repressor
D HM1_1341 transcriptional regulator, ctsr family K03708 ctsR; transcriptional regulator of stress and heat shock response
D HM1_0083 mtrB; transcription attenuation protein mtrb K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D HM1_2105 pyrR; pyrr bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HM1_2069 conserved hypothetical protein, possible ATP cone domain protein K07738 nrdR; transcriptional repressor NrdR
D HM1_2050 mraZ; cell division mraz protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hmo03021]
D HM1_1407 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HM1_1370 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HM1_1371 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HM1_1067 rpoE; DNA-directed RNA polymerase delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta
D HM1_2128 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HM1_1995 rpoD; RNA polymerase sigma factor rpod K03086 rpoD; RNA polymerase primary sigma factor
D HM1_2919 RNA polymerase sigma-70, region 4 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HM1_0129 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HM1_2853 rpoE; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D HM1_0321 sigF; RNA polymerase sigma-f factor, putative K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HM1_2066 spoIIGB; RNA polymerase sigma-e factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HM1_2067 spoIIIG; RNA polymerase sigma-g factor, putative K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HM1_0234 spoIIIC; RNA polymerase sigma-k factor, putative K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HM1_2772 RNA polymerase, sigma-70 factor family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D HM1_1361 rpoE; RNA polymerase sigma-70 factor K27000 sigH; RNA polymerase sigma-H factor
D HM1_1832 RNA polymerase sigma-70 region 2 K03093 sigI; RNA polymerase sigma-I factor
D HM1_1310 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D HM1_2251 fliA; RNA polymerase sigma factor, flia/whig family K02405 fliA; RNA polymerase sigma factor FliA
D HM1_2310 nusA; transcription termination factor nusa K02600 nusA; transcription termination/antitermination protein NusA
D HM1_0286 nusB; transcription antitermination factor nusb K03625 nusB; transcription antitermination protein NusB
D HM1_1364 nusG; transcription termination/antitermination factor nusg K02601 nusG; transcription termination/antitermination protein NusG
D HM1_2362 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D HM1_2612 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D HM1_2115 anti-anti-sigma factor family protein K04749 rsbV; anti-sigma B factor antagonist
D HM1_1673 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D HM1_0644 greA; transcription elongation factor grea K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:hmo03019]
D HM1_2712 cafA; ribonuclease, rne/rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D HM1_2169 rnc; ribonuclease iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HM1_2413 metallo-beta-lactamase family protein, putative K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HM1_2334 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HM1_2379 conserved hypothetical protein, contains hdig, hd and kh domains K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HM1_2998 hd domain protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D HM1_2374 dead/deah box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HM1_1605 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_1316 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_2322 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HM1_0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HM1_2437 dnaK; chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D HM1_1422 groEL; chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HM1_2580 hfq; RNA chaperone hfq K03666 hfq; host factor-I protein
D HM1_0232 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D HM1_1209 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D HM1_1306 ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
D HM1_1002 hrpB; ATP-dependent helicase hrpb K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:hmo03011]
D HM1_1931 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945 RP-S1; small subunit ribosomal protein S1
D HM1_2256 rpsB; 30S ribosomal protein s2 K02967 RP-S2; small subunit ribosomal protein S2
D HM1_1384 rpsC; 30S ribosomal protein s3 K02982 RP-S3; small subunit ribosomal protein S3
D HM1_1406 rpsD; 30S ribosomal protein s4 K02986 RP-S4; small subunit ribosomal protein S4
D HM1_1395 rpsE; 30S ribosomal protein s5 K02988 RP-S5; small subunit ribosomal protein S5
D HM1_1697 rpsF; 30S ribosomal protein s6 K02990 RP-S6; small subunit ribosomal protein S6
D HM1_1374 rpsG; 30S ribosomal protein s7 K02992 RP-S7; small subunit ribosomal protein S7
D HM1_1392 rpsH; 30S ribosomal protein s8 K02994 RP-S8; small subunit ribosomal protein S8
D HM1_1414 rpsI; 30S ribosomal protein s9 K02996 RP-S9; small subunit ribosomal protein S9
D HM1_1377 rpsJ; 30S ribosomal protein s10 K02946 RP-S10; small subunit ribosomal protein S10
D HM1_1405 rpsK; 30S ribosomal protein s11 K02948 RP-S11; small subunit ribosomal protein S11
D HM1_1373 rpsL; 30S ribosomal protein s12 K02950 RP-S12; small subunit ribosomal protein S12
D HM1_1404 rpsM; 30S ribosomal protein s13 K02952 RP-S13; small subunit ribosomal protein S13
D HM1_1391 rpsN; 30S ribosomal protein s14 K02954 RP-S14; small subunit ribosomal protein S14
D HM1_2321 rpsO; 30S ribosomal protein s15 K02956 RP-S15; small subunit ribosomal protein S15
D HM1_2183 rpsP; 30S ribosomal protein s16 K02959 RP-S16; small subunit ribosomal protein S16
D HM1_1387 rpsQ; 30S ribosomal protein s17 K02961 RP-S17; small subunit ribosomal protein S17
D HM1_1696 rpsR; 30S ribosomal protein s18 K02963 RP-S18; small subunit ribosomal protein S18
D HM1_1382 rpsS; 30S ribosomal protein s19 K02965 RP-S19; small subunit ribosomal protein S19
D HM1_2427 rpsT; 30S ribosomal protein s20 K02968 RP-S20; small subunit ribosomal protein S20
D HM1_1366 rplA; 50S ribosomal protein l1 K02863 RP-L1; large subunit ribosomal protein L1
D HM1_1381 rplB; 50S ribosomal protein l2 K02886 RP-L2; large subunit ribosomal protein L2
D HM1_1378 rplC; 50S ribosomal protein l3 K02906 RP-L3; large subunit ribosomal protein L3
D HM1_1379 rplD; 50S ribosomal protein l4 K02926 RP-L4; large subunit ribosomal protein L4
D HM1_1390 rplE; 50S ribosomal protein l5 K02931 RP-L5; large subunit ribosomal protein L5
D HM1_1393 rplF; 50S ribosomal protein l6 K02933 RP-L6; large subunit ribosomal protein L6
D HM1_0973 rplI; 50S ribosomal protein l9 K02939 RP-L9; large subunit ribosomal protein L9
D HM1_1367 rplJ; 50S ribosomal protein l10 K02864 RP-L10; large subunit ribosomal protein L10
D HM1_1365 rplK; 50S ribosomal protein l11 K02867 RP-L11; large subunit ribosomal protein L11
D HM1_1368 rplL; 50S ribosomal protein l7/l12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HM1_1413 rplM; 50S ribosomal protein l13 K02871 RP-L13; large subunit ribosomal protein L13
D HM1_1388 rplN; 50S ribosomal protein l14 K02874 RP-L14; large subunit ribosomal protein L14
D HM1_1397 rplO; 50S ribosomal protein l15 K02876 RP-L15; large subunit ribosomal protein L15
D HM1_1385 rplP; 50S ribosomal protein l16 K02878 RP-L16; large subunit ribosomal protein L16
D HM1_1408 rplQ; 50S ribosomal protein l17 K02879 RP-L17; large subunit ribosomal protein L17
D HM1_1394 rplR; 50S ribosomal protein l18 K02881 RP-L18; large subunit ribosomal protein L18
D HM1_2188 rplS; 50S ribosomal protein l19 K02884 RP-L19; large subunit ribosomal protein L19
D HM1_1791 rplT; 50S ribosomal protein l20 K02887 RP-L20; large subunit ribosomal protein L20
D HM1_2711 rplU; 50S ribosomal protein l21 K02888 RP-L21; large subunit ribosomal protein L21
D HM1_1383 rplV; 50S ribosomal protein l22 K02890 RP-L22; large subunit ribosomal protein L22
D HM1_1380 rplW; 50S ribosomal protein l23 K02892 RP-L23; large subunit ribosomal protein L23
D HM1_1389 rplX; 50S ribosomal protein l24 K02895 RP-L24; large subunit ribosomal protein L24
D HM1_2709 rpmA; 50S ribosomal protein l27 K02899 RP-L27; large subunit ribosomal protein L27
D HM1_2147 rpmB; 50S ribosomal protein l28 K02902 RP-L28; large subunit ribosomal protein L28
D HM1_1386 rpmC; 50S ribosomal protein l29 K02904 RP-L29; large subunit ribosomal protein L29
D HM1_1396 rpmD; 50S ribosomal protein l30 K02907 RP-L30; large subunit ribosomal protein L30
D HM1_1081 rpmE; 50S ribosomal protein l31 K02909 RP-L31; large subunit ribosomal protein L31
D HM1_2159 rpmF; 50S ribosomal protein l32 K02911 RP-L32; large subunit ribosomal protein L32
D HM1_1362 rpmG; 50S ribosomal protein l33 K02913 RP-L33; large subunit ribosomal protein L33
D HM1_0907 rpmH; 50S ribosomal protein l34 K02914 RP-L34; large subunit ribosomal protein L34
D HM1_1790 rpmI; 50S ribosomal protein l35 K02916 RP-L35; large subunit ribosomal protein L35
D HM1_1403 rpmJ; 50S ribosomal protein l36 K02919 RP-L36; large subunit ribosomal protein L36
D HM1_0725 ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 K02897 RP-L25; large subunit ribosomal protein L25
D HM1_1372 ribosomal protein, l7ae family K07590 RP-L7A; large subunit ribosomal protein L7A
D HM1_0563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_1816 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_0875 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2355 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_3085 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2832 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_1007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2287 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_1006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_3087 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2286 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2354 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_1815 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_0562 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_0876 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2833 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_3083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2829 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_1009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2289 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_1819 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2357 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_0873 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_0565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hmo03009]
D HM1_2169 rnc; ribonuclease iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HM1_2451 era; GTP-binding protein era K03595 era; GTPase
D HM1_2705 obg; spo0b-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D HM1_2310 nusA; transcription termination factor nusa K02600 nusA; transcription termination/antitermination protein NusA
D HM1_0286 nusB; transcription antitermination factor nusb K03625 nusB; transcription antitermination protein NusB
D HM1_1364 nusG; transcription termination/antitermination factor nusg K02601 nusG; transcription termination/antitermination protein NusG
D HM1_0743 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HM1_2440 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HM1_0914 gidB; methyltransferase gidb K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HM1_2051 mraW; s-adenosyl-methyltransferase mraw K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HM1_0755 uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase, putative K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HM1_2582 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D HM1_0296 hemolysin a, putative K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HM1_1359 RNA methyltransferase, trmh family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HM1_0992 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HM1_2136 radical sam enzyme, cfr family, putative K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HM1_2983 rumA; 23S rRNA (uracil-5-)-methyltransferase ruma K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HM1_1897 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HM1_0220 pseudouridine synthase, rlua family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HM1_2104 pseudouridine synthase, rlua family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HM1_1719 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HM1_2185 rimM; 16S rRNA processing protein rimm K02860 rimM; 16S rRNA processing protein RimM
D HM1_2369 miab-like tRNA modifying enzyme K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D HM1_2439 prmA; ribosomal protein l11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HM1_2712 cafA; ribonuclease, rne/rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D HM1_0533 holliday junction resolvase, putative K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HM1_1358 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D HM1_2374 dead/deah box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HM1_2139 GTPase, putative K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HM1_1985 GTP-binding protein K03977 engA; GTPase
D HM1_2190 GTP-binding protein, putative K14540 rbgA; ribosome biogenesis GTPase A
D HM1_2573 GTP-binding domain protein K03665 hflX; GTPase
D HM1_1085 sua5/ycio/yrdc/ywlc family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HM1_1843 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HM1_2315 rbfA; ribosome-binding factor a K02834 rbfA; ribosome-binding factor A
D HM1_2309 conserved hypothetical protein, possible yhbc family K09748 rimP; ribosome maturation factor RimP
D HM1_2698 iojap-like protein K09710 ybeB; ribosome-associated protein
D HM1_2448 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D HM1_1265 sigma 54 modulation protein/ribosomal protein s30ae K05808 hpf; ribosome hibernation promoting factor
D HM1_0969 ychF; GTP-binding protein ychf K06942 ychF; ribosome-binding ATPase
D HM1_2158 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:hmo03016]
D HM1_0352 rnz; ribonuclease z, putative K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D HM1_1881 tRNA nucleotidyltransferase/poly(a) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HM1_2791 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HM1_2267 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HM1_2096 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HM1_2677 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HM1_0752 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HM1_1023 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D HM1_1065 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HM1_0643 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HM1_1848 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HM1_0530 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HM1_1780 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HM1_0850 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HM1_1357 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HM1_2749 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HM1_1847 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HM1_1797 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HM1_1798 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HM1_1812 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HM1_1883 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HM1_1844 dtd; d-tyrosyl-tRNA(tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HM1_2442 hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HM1_0221 trmB; tRNA (guanine-n(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HM1_1412 truA; tRNA pseudouridine synthase a K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HM1_2317 truB; tRNA pseudouridine synthase b K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HM1_1864 nifS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HM1_1085 sua5/ycio/yrdc/ywlc family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HM1_2581 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HM1_0912 trmE; tRNA modification GTPase trme K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HM1_0913 gidA; glucose-inhibited division protein a K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HM1_2508 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D HM1_0908 rnpA; ribonuclease p protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HM1_0465 rph; ribonuclease ph K00989 rph; ribonuclease PH [EC:2.7.7.56]
D HM1_2457 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HM1_2458 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HM1_1355 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HM1_0826 cytidine and deoxycytidylate deaminase zinc-binding region protein, putative K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HM1_0661 dihydrouridine synthase tim-barrel nifr3 family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HM1_2441 miab-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D HM1_2212 gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HM1_2186 trmD; tRNA (guanine-n1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HM1_1997 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D HM1_0104 RNA methyltransferase, trmh family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HM1_1794 RNA methyltransferase, trmh family K03437 spoU; RNA methyltransferase, TrmH family
D HM1_1866 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HM1_1835 queA; s-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HM1_0505 exsb protein, putative K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D HM1_0437 6-pyruvoyl-tetrahydropterin synthase, putative K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D HM1_2555 radical sam domain protein, putative K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D HM1_2566 electron transport protein, putative K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D HM1_1830 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D HM1_2339 conserved hypothetical protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D HM1_1836 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HM1_0679 tilS; tRNA(ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HM1_1718 glycoprotease protein family member K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HM1_1724 gcp; o-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HM1_1717 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HM1_1849 thif family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D HM1_2322 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:hmo03012]
D HM1_2314 infB; translation initiation factor if-2 K02519 infB; translation initiation factor IF-2
D HM1_1789 infC; translation initiation factor if-3 K02520 infC; translation initiation factor IF-3
D HM1_1750 abc transporter, ATP-binding protein, putative K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HM1_2257 tsf; translation elongation factor ts K02357 tsf; elongation factor Ts
D HM1_1376 tuf; translation elongation factor tu K02358 tuf; elongation factor Tu
D HM1_1375 fusA; translation elongation factor g K02355 fusA; elongation factor G
D HM1_2561 fusA; translation elongation factor g K02355 fusA; elongation factor G
D HM1_0924 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D HM1_0988 conserved hypothetical protein K21803 METTL21B; EEF1A lysine methyltransferase 3 [EC:2.1.1.-]
D HM1_1083 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HM1_2259 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HM1_1084 methyltransferase, putative K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HM1_0724 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HM1_1402 infA; translation initiation factor if-1 K02518 infA; translation initiation factor IF-1
D HM1_0271 efp; translation elongation factor p K02356 efp; elongation factor P
D HM1_3153 lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D HM1_1267 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HM1_1671 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:hmo03110]
D HM1_1340 chaperone clpb K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D HM1_1344 clpC; clpc ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HM1_0472 clpX; ATP-dependent clp protease, ATP-binding subunit clpx K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HM1_2215 hslU; heat shock protein hslvu, ATPase subunit hslu K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D HM1_0015 htpG; heat shock protein htpg K04079 HSP90A; molecular chaperone HtpG
D HM1_2437 dnaK; chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D HM1_1422 groEL; chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HM1_2435 thermosome subunit K22447 cct; archaeal chaperonin
D HM1_2438 dnaJ; chaperone protein dnaj K03686 dnaJ; molecular chaperone DnaJ
D HM1_2146 heat shock protein hsp33 K04083 hslO; molecular chaperone Hsp33
D HM1_2436 grpE; co-chaperone grpe K03687 GRPE; molecular chaperone GrpE
D HM1_1421 groES; chaperonin groes K04078 groES; chaperonin GroES
D HM1_0990 serine protease do, putative K04771 degP; serine protease Do [EC:3.4.21.107]
D HM1_2812 serine protease do, putative K04771 degP; serine protease Do [EC:3.4.21.107]
D HM1_0678 ATP-dependent metalloprotease ftsh K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HM1_2372 vesicle-fusing ATPase, putative K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HM1_1098 atpB; ATP synthase f0, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HM1_1482 hypA; hydrogenase nickel insertion protein hypa K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D HM1_1483 hypB; hydrogenase accessory protein hypb K04652 hypB; hydrogenase nickel incorporation protein HypB
D HM1_2600 subtilin family serine protease, putative K01342 aprE; subtilisin [EC:3.4.21.62]
D HM1_1851 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:hmo04131]
D HM1_0677 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HM1_0223 hypothetical membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D HM1_0763 hexokinase, putative K00844 HK; hexokinase [EC:2.7.1.1]
D HM1_2603 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1602 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1311 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_0076 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HM1_1600 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HM1_0015 htpG; heat shock protein htpg K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:hmo04121]
C 03051 Proteasome [BR:hmo03051]
D HM1_0015 htpG; heat shock protein htpg K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:hmo03032]
D HM1_2808 rnhA; ribonuclease h K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D HM1_2947 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_2858 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_0716 hup; DNA-binding protein hu K03530 hupB; DNA-binding protein HU-beta
D HM1_0905 dnaA; chromosomal replication initiator protein dnaa K02313 dnaA; chromosomal replication initiator protein
D HM1_0975 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HM1_0960 DNA replication protein, putative K02315 dnaC; DNA replication protein DnaC
D HM1_1994 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HM1_0970 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HM1_0084 dnaE; DNA polymerase iii alpha subunit, putative K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HM1_2272 polC; DNA polymerase iii, alpha subunit, gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HM1_0904 dnaN; DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HM1_2426 holA; DNA polymerase iii, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HM1_0758 holB; DNA polymerase iii delta prime subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HM1_0408 DNA polymerase iii polc-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HM1_0813 dnaX; DNA polymerase iii gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HM1_2192 rnhB; ribonuclease hii K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HM1_1748 polA; DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HM1_3028 ligA; DNA ligase, nad-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HM1_0574 dam; d12 class n6 adenine-specific DNA methyltransferase superfamily K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HM1_1715 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HM1_0882 gyrA; DNA gyrase, a subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HM1_0901 gyrB; DNA gyrase, b subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HM1_2211 topA; DNA topoisomerase i K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HM1_1932 topB; DNA topoisomerase iii K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hmo03036]
D HM1_2947 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_2858 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_2169 rnc; ribonuclease iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HM1_0716 hup; DNA-binding protein hu K03530 hupB; DNA-binding protein HU-beta
D HM1_0905 dnaA; chromosomal replication initiator protein dnaa K02313 dnaA; chromosomal replication initiator protein
D HM1_2580 hfq; RNA chaperone hfq K03666 hfq; host factor-I protein
D HM1_1825 transcriptional regulator, asnc family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D HM1_2173 smc; chromosome partition protein smc, putative K03529 smc; chromosome segregation protein
D HM1_1885 scpA; segregation and condensation protein a K05896 scpA; segregation and condensation protein A
D HM1_1886 scpB; segregation and condensation protein b K06024 scpB; segregation and condensation protein B
D HM1_1270 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D HM1_2337 spoIIIE; ftsk/spoiiie family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HM1_2052 ftsL; cell division protein ftsl K03586 ftsL; cell division protein FtsL
D HM1_2063 ftsQ; cell division septal protein ftsq, putative K03589 ftsQ; cell division protein FtsQ
D HM1_2058 spoVE; stage v sporulation protein e K03588 ftsW; cell division protein FtsW
D HM1_1271 ftsX; cell division protein ftsx, putative K09811 ftsX; cell division transport system permease protein
D HM1_2064 ftsZ; cell division protein ftsz K03531 ftsZ; cell division protein FtsZ
D HM1_1799 duf710 protein K09888 zapA; cell division protein ZapA
D HM1_1423 cwlD; n-acetylmuramoyl-l-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2806 n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_3102 germination specific n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2720 n-acetylmuramoyl-l-alanine amidase, putative K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2726 minC; septum site-determining protein minc K03610 minC; septum site-determining protein MinC
D HM1_2725 minD; septum site-determining protein mind K03609 minD; septum site-determining protein MinD
D HM1_2724 minE; cell division topological specificity factor mine, putative K03608 minE; cell division topological specificity factor
D HM1_2094 divIVA; cell-division initiation protein diviva K04074 divIVA; cell division initiation protein
D HM1_2090 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D HM1_2731 cell shape determining protein, mreb/mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D HM1_1114 cell shape determining protein, mreb/mrl family, putative K03569 mreB; rod shape-determining protein MreB and related proteins
D HM1_2729 mreC; rod shape-determining protein mrec, putative K03570 mreC; rod shape-determining protein MreC
D HM1_2728 rod shape-determining protein, putative K03571 mreD; rod shape-determining protein MreD
D HM1_2723 rodA; rod shape-determining protein roda, putative K05837 rodA; rod shape determining protein RodA
D HM1_0915 cobyrinic acid a,c-diamide synthase, putative K03496 parA; chromosome partitioning protein
D HM1_0916 parB; chromosome partitioning protein parb, putative K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HM1_0913 gidA; glucose-inhibited division protein a K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HM1_0914 gidB; methyltransferase gidb K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HM1_2212 gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HM1_2213 xerC; tyrosine recombinase xerc, putative K03733 xerC; integrase/recombinase XerC
D HM1_0314 xerD; tyrosine recombinase xerd, putative K04763 xerD; integrase/recombinase XerD
D HM1_0596 phage integrase, putative K04763 xerD; integrase/recombinase XerD
D HM1_0610 phage integrase K04763 xerD; integrase/recombinase XerD
D HM1_0609 phage integrase K04763 xerD; integrase/recombinase XerD
D HM1_0608 integrase/recombinase, putative K04763 xerD; integrase/recombinase XerD
D HM1_0597 phage recombinase K04763 xerD; integrase/recombinase XerD
D HM1_2951 phage integrase K04763 xerD; integrase/recombinase XerD
D HM1_2952 phage integrase K04763 xerD; integrase/recombinase XerD
D HM1_2953 integrase/recombinase, putative K04763 xerD; integrase/recombinase XerD
D HM1_0717 mazg family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D HM1_0604 fic; cell filamentation protein fic, putative K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HM1_0824 fic protein, putative K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HM1_0044 fic family protein, putative K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HM1_0475 GTP-binding protein K03978 engB; GTP-binding protein
D HM1_1308 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:hmo03400]
D HM1_1035 6-o-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HM1_1861 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D HM1_2794 nth; endonuclease iii K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HM1_2472 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HM1_1749 mutM; formamidopyrimidine-dna glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HM1_0112 ap endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HM1_2535 recJ; single-stranded-DNA-specific exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HM1_3028 ligA; DNA ligase, nad-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HM1_1748 polA; DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HM1_1297 uvrA; excinuclease abc, a subunit K03701 uvrA; excinuclease ABC subunit A
D HM1_1293 uvrB; excinuclease abc, b subunit K03702 uvrB; excinuclease ABC subunit B
D HM1_1301 uvrC; excinuclease abc, c subunit K03703 uvrC; excinuclease ABC subunit C
D HM1_3029 pcrA; ATP-dependent DNA helicase pcra K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HM1_1370 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HM1_1371 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HM1_1407 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HM1_1067 rpoE; DNA-directed RNA polymerase delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta
D HM1_2128 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HM1_0721 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HM1_2585 mutS; DNA mismatch repair protein muts K03555 mutS; DNA mismatch repair protein MutS
D HM1_1805 muts2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D HM1_2583 mutL; DNA mismatch repair protein mutl K03572 mutL; DNA mismatch repair protein MutL
D HM1_0291 xseA; exodeoxyribonuclease vii, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HM1_0292 xseB; exodeoxyribonuclease vii, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HM1_0084 dnaE; DNA polymerase iii alpha subunit, putative K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HM1_2272 polC; DNA polymerase iii, alpha subunit, gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HM1_0904 dnaN; DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HM1_2426 holA; DNA polymerase iii, delta subunit, putative K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HM1_0758 holB; DNA polymerase iii delta prime subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HM1_0408 DNA polymerase iii polc-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HM1_0813 dnaX; DNA polymerase iii gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HM1_0970 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HM1_0574 dam; d12 class n6 adenine-specific DNA methyltransferase superfamily K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HM1_1715 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HM1_2859 vsr; DNA mismatch endonuclease vsr, putative K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D HM1_3141 exodeoxyribonuclease V, alpha chain, RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HM1_2377 recA; reca protein K03553 recA; recombination protein RecA
D HM1_1828 ruvA; holliday junction DNA helicase ruva K03550 ruvA; holliday junction DNA helicase RuvA
D HM1_1829 ruvB; holliday junction DNA helicase ruvb K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HM1_1827 ruvC; crossover junction endodeoxyribonuclease ruvc K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D HM1_2131 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HM1_1589 sbcC; exonuclease sbcc, putative K03546 sbcC; DNA repair protein SbcC/Rad50
D HM1_1588 sbcD; exonuclease sbcd K03547 sbcD; DNA repair protein SbcD/Mre11
D HM1_1346 radA; DNA repair protein rada K04485 radA; DNA repair protein RadA/Sms
D HM1_0903 recF; DNA replication and repair protein recf K03629 recF; DNA replication and repair protein RecF
D HM1_2150 recG; ATP-dependent DNA helicase recg, putative K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HM1_2453 recO; DNA repair protein reco K03584 recO; DNA repair protein RecO (recombination protein O)
D HM1_0809 recR; recombination protein recr K06187 recR; recombination protein RecR
D HM1_0301 recN; DNA repair protein recn K03631 recN; DNA repair protein RecN (Recombination protein N)
D HM1_2996 ATP-dependent deoxyribonuclease subunit a K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D HM1_2997 addB; ATP-dependent nuclease subunit b K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D HM1_0516 cas1; crispr-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D HM1_0186 cas1; crispr-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D HM1_3135 Ku domain protein K10979 ku; DNA end-binding protein Ku
D HM1_3130 conserved domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D HM1_0882 gyrA; DNA gyrase, a subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HM1_0901 gyrB; DNA gyrase, b subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HM1_2211 topA; DNA topoisomerase i K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HM1_0716 hup; DNA-binding protein hu K03530 hupB; DNA-binding protein HU-beta
D HM1_2536 dinB; DNA polymerase iv K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HM1_2569 lexA; lexa repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HM1_0541 lexA; lexa repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D HM1_2378 recX; regulatory protein recx, putative K03565 recX; regulatory protein
D HM1_1800 DNA polymerase x family protein, putative K02347 polX; DNA polymerase (family X)
D HM1_2316 dhh family domain protein, putative K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:hmo03029]
D HM1_2314 infB; translation initiation factor if-2 K02519 infB; translation initiation factor IF-2
D HM1_1789 infC; translation initiation factor if-3 K02520 infC; translation initiation factor IF-3
D HM1_2257 tsf; translation elongation factor ts K02357 tsf; elongation factor Ts
D HM1_1376 tuf; translation elongation factor tu K02358 tuf; elongation factor Tu
D HM1_1375 fusA; translation elongation factor g K02355 fusA; elongation factor G
D HM1_2561 fusA; translation elongation factor g K02355 fusA; elongation factor G
D HM1_2451 era; GTP-binding protein era K03595 era; GTPase
D HM1_1812 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HM1_2677 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HM1_1848 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HM1_1065 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HM1_3025 gatA; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase, a subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HM1_3024 gatB; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase, b subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HM1_3026 gatC; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase, c subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HM1_0970 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HM1_2437 dnaK; chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D HM1_2436 grpE; co-chaperone grpe K03687 GRPE; molecular chaperone GrpE
D HM1_1422 groEL; chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HM1_1421 groES; chaperonin groes K04078 groES; chaperonin GroES
D HM1_2438 dnaJ; chaperone protein dnaj K03686 dnaJ; molecular chaperone DnaJ
D HM1_1864 nifS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HM1_0910 spoIIIJ; stage iii sporulation protein j/oxaa-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HM1_0015 htpG; heat shock protein htpg K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hmo02000]
D HM1_2685 abc transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HM1_2686 abc transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HM1_1170 sulfate abc transporter, sulfate-binding protein, putative K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D HM1_1171 cysT; sulfate abc transporter, permease protein cyst, putative K02046 cysU; sulfate/thiosulfate transport system permease protein
D HM1_1172 sulfate abc transporter, permease protein cysw K02047 cysW; sulfate/thiosulfate transport system permease protein
D HM1_1174 cysA; sulfate/thiosulfate import ATP-binding protein cysa, putative K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D HM1_1548 modA; molybdate abc transporter, molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D HM1_1550 modB; molybdate abc transporter, permease protein K02018 modB; molybdate transport system permease protein
D HM1_1549 abc transporter K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D HM1_0336 tungstate abc transporter permease K05772 tupA; tungstate transport system substrate-binding protein
D HM1_0334 abc transporter, substrate-binding protein K05773 tupB; tungstate transport system permease protein
D HM1_0335 abc transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D HM1_2279 spermidine/putrescine abc transporter, spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HM1_2278 spermidine/putrescine abc transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D HM1_2277 spermidine/putrescine abc transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D HM1_2276 potA; spermidine/putrescine abc transporter, ATP-binding protein pota K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HM1_2420 ribose abc transporter, ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D HM1_2419 rbsC; ribose transport system permease protein rbsc K10440 rbsC; ribose transport system permease protein
D HM1_2418 rbsA; ribose abc transporter, ATP-binding protein rbsa K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D HM1_2695 membrane protein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D HM1_2692 abc transporter, permease protein, putative K23535 nupB; general nucleoside transport system permease protein
D HM1_2691 branched chain amino acid abc transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HM1_2693 abc transporter, abc-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HM1_2082 pstD; phosphate abc transporter, phosphate-binding protein pstd K02040 pstS; phosphate transport system substrate-binding protein
D HM1_2083 pstC; phosphate abc transporter, permease protein pstc K02037 pstC; phosphate transport system permease protein
D HM1_2084 pstA; phosphate abc transporter, permease protein psta K02038 pstA; phosphate transport system permease protein
D HM1_2085 pstB; phosphate abc transporter, ATP-binding protein pstb K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HM1_1261 glutamine abc transporter, glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D HM1_1262 glutamine abc transporter, permease protein K10037 glnP; glutamine transport system permease protein
D HM1_1263 glutamine abc transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HM1_0170 glutamine abc transporter, glutamine-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D HM1_0174 glutamine abc transporter, glutamine-binding protein, putative K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D HM1_0173 glutamine abc transporter, glutamine-binding protein, putative K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D HM1_0169 glnQ; glutamine abc transporter, ATP-binding protein glnq K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HM1_0489 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0490 branched chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0883 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0884 branched-chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0925 branched-chain amino acid abc transporter, substrate binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0115 branched chain amino acid abc transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HM1_0491 branched-chain amino acid abc transporter, permease component K01997 livH; branched-chain amino acid transport system permease protein
D HM1_0885 branched chain amino acid abc transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HM1_0492 branched-chain amino acid abc transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HM1_0886 branched-chain amino acid abc transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HM1_0493 branched chain amino acid abc transporter, putative K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HM1_0887 branched chain amino acid abc transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HM1_0494 branched-chain amino acid abc transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HM1_0888 branched chain amino acid abc transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HM1_0189 amino acid abc transporter, amino acid-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HM1_1873 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HM1_1874 peptide abc transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HM1_1875 peptide abc transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HM1_1876 oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HM1_0767 adcA; zinc-binding lipoprotein adca K09815 znuA; zinc transport system substrate-binding protein
D HM1_2422 abc 3 transport family protein K09816 znuB; zinc transport system permease protein
D HM1_2421 abc transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HM1_0212 cbiN; cobalt transport protein cbin K02009 cbiN; cobalt/nickel transport protein
D HM1_0209 cbiQ; cobalt abc transporter, permease protein cbiq K02008 cbiQ; cobalt/nickel transport system permease protein
D HM1_3001 cbiQ; cobalt abc transporter, permease protein cbiq K02008 cbiQ; cobalt/nickel transport system permease protein
D HM1_0213 cbiM; cobalamin biosynthesis protein cbim K02007 cbiM; cobalt/nickel transport system permease protein
D HM1_3002 cbiM; cobalamin biosynthesis protein cbim K02007 cbiM; cobalt/nickel transport system permease protein
D HM1_0208 cbiO; cobalt transport protein ATP-binding subunit cbio K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HM1_3000 cbiO; cobalt abc transporter, ATPase subunit cbio K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HM1_3139 biotin synthesis BioY protein K03523 bioY; biotin transport system substrate-specific component
D HM1_0393 bioY; biotin synthesis protein, bioy K03523 bioY; biotin transport system substrate-specific component
D HM1_1860 conserved membrane protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D HM1_1411 cbiQ; cobalt transport protein, cbiq putative K16785 ecfT; energy-coupling factor transport system permease protein
D HM1_0773 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D HM1_1858 cbiQ; cobalt transport protein, cbiq putative K16785 ecfT; energy-coupling factor transport system permease protein
D HM1_1409 cbiO; cobalt import ATP-binding protein cbio 2 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_0775 abc transporter K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_0774 cobalt abc transporter, ATP-binding component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_1410 cbiO; cobalt import ATP-binding protein cbio 1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_1859 abc-type cobalt transport system, ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HM1_1502 abc-2 transporter K25181 ybhS; drug efflux transport system permease protein
D HM1_0355 abc transporter K25181 ybhS; drug efflux transport system permease protein
D HM1_1501 abc transporter K25182 ybhF; drug efflux transport system ATP-binding protein
D HM1_1500 secretion protein hlyd, putative K25183 ybhG; membrane fusion protein YbhG
D HM1_0354 conserved hypothetical protein K25183 ybhG; membrane fusion protein YbhG
D HM1_1647 hypothetical protein K19310 bcrB; bacitracin transport system permease protein
D HM1_1646 bcrA; bacitracin abc transporter K19309 bcrA; bacitracin transport system ATP-binding protein
D HM1_1271 ftsX; cell division protein ftsx, putative K09811 ftsX; cell division transport system permease protein
D HM1_1270 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D HM1_2035 daunorubicin resistance transmembrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D HM1_1143 abc-2 transporter, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D HM1_0878 abc transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HM1_2824 abc-2 transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HM1_1691 abc transporter, permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D HM1_1690 abc transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HM1_1144 abc transporter, ATP binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HM1_0879 abc transporter, putative K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HM1_2033 daunorubicin resistance abc transporter ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HM1_2823 abc transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HM1_3093 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HM1_0429 permease, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D HM1_3094 abc transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HM1_0430 abc transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HM1_0950 major facilitator superfamily protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D HM1_0836 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HM1_0837 phosphocarrier protein hpr, putative K02784 ptsH; phosphocarrier protein HPr
D HM1_0838 dhaM; dihydroxyacetone kinase, phosphotransfer subunit, putative K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D HM1_1595 glycerol uptake facilitator protein, putative K02440 glpF; glycerol uptake facilitator
D HM1_1027 ion channel, putative K10716 kch; voltage-gated potassium channel
D HM1_0741 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D HM1_0965 mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel
D HM1_1504 motA; flagellar motor component mota, putative K02556 motA; chemotaxis protein MotA
D HM1_1505 motB; flagellar motor protein motb, putative K02557 motB; chemotaxis protein MotB
D HM1_2601 corA; magnesium and cobalt transport protein cora K03284 corA; magnesium transporter
D HM1_2790 magnesium and cobalt transporter, putative K03284 corA; magnesium transporter
D HM1_0795 crcb-like protein K06199 crcB; fluoride exporter
D HM1_0794 crcb protein, putative K06199 crcB; fluoride exporter
D HM1_1132 hypothetical protein K12340 tolC; outer membrane protein
D HM1_0943 gerKB; spore germination protein kb, putative K06296 gerKB; spore germination protein KB
D HM1_0478 spore germination protein, putative K06296 gerKB; spore germination protein KB
D HM1_3119 gerKB; spore germination protein kb, putative K06296 gerKB; spore germination protein KB
D HM1_1543 divalent heavy-metal cation transporter K07238 TC.ZIP; zinc transporter, ZIP family
D HM1_0457 zip zinc transporter family protein, putative K07238 TC.ZIP; zinc transporter, ZIP family
D HM1_2671 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D HM1_0368 glcA; glycolate permease glca K03303 lutP; lactate permease
D HM1_3016 l-lactate permease family protein, putative K03303 lutP; lactate permease
D HM1_2663 na+/solute symporter K14393 actP; cation/acetate symporter
D HM1_1544 nhaA; na+/h+ antiporter nhaa K03313 nhaA; Na+:H+ antiporter, NhaA family
D HM1_1792 trkH; k+ uptake transporter trkh family protein K03498 trkH; trk/ktr system potassium uptake protein
D HM1_1793 trkA; k+ uptake transporter trka family protein K03499 trkA; trk/ktr system potassium uptake protein
D HM1_2087 uracil/xanthine permease K02824 uraA; uracil permease
D HM1_3115 xanthine/uracil permease family protein, putative K06901 pbuG; adenine/guanine/hypoxanthine permease
D HM1_0777 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D HM1_1283 sodium/bile acid symporter family protein K03325 ACR3; arsenite transporter
D HM1_0718 spoVB; stage v sporulation protein b K06409 spoVB; stage V sporulation protein B
D HM1_2560 spoVB; stage v sporulation protein b K06409 spoVB; stage V sporulation protein B
D HM1_2430 mviN; integral membrane protein mvin K03980 murJ; putative peptidoglycan lipid II flippase
D HM1_1591 mviN; integral membrane protein mvin K03980 murJ; putative peptidoglycan lipid II flippase
D HM1_2058 spoVE; stage v sporulation protein e K03588 ftsW; cell division protein FtsW
D HM1_0223 hypothetical membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D HM1_1086 integral membrane protein duf6, putative K23242 mntP; manganese efflux pump family protein
D HM1_1318 v-type h(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D HM1_0282 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D HM1_0380 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D HM1_0378 mmdA; methylmalonyl-coa carboxyltransferase, alpha subunit, putative K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D HM1_0379 biotin carboxyl carrier protein, putative K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D HM1_2598 ccdA; cytochrome c assembly protein, ccda K06196 ccdA; cytochrome c-type biogenesis protein
D HM1_0782 dsbD; thiol:disulfide interchange protein, putative K06196 ccdA; cytochrome c-type biogenesis protein
D HM1_0431 efflux transporter, rnd family, mfp subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D HM1_0087 feoA; ferrous iron uptake protein feoa K04758 feoA; ferrous iron transport protein A
D HM1_3068 feoA; ferrous iron uptake protein feoa K04758 feoA; ferrous iron transport protein A
D HM1_3067 feoA; ferrous iron uptake protein feoa K04758 feoA; ferrous iron transport protein A
D HM1_2821 GTP-binding domain protein K04759 feoB; ferrous iron transport protein B
D HM1_3069 feoB; ferrous iron transport protein b K04759 feoB; ferrous iron transport protein B
D HM1_0089 ferrous iron transport protein b, putative K04759 feoB; ferrous iron transport protein B
D HM1_0694 tspO; tryptophan-rich sensory protein tspo K05770 TSPO; translocator protein
D HM1_1765 tspo/mbr family protein, putative K05770 TSPO; translocator protein
C 02044 Secretion system [BR:hmo02044]
D HM1_1132 hypothetical protein K12340 tolC; outer membrane protein
D HM1_0260 xcpT; general secretion pathway protein g K02456 gspG; general secretion pathway protein G
D HM1_0253 peptidase a24a, prepilin type iv peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HM1_0584 comC; type iv prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HM1_0249 type ii secretion system protein e, putative K02652 pilB; type IV pilus assembly protein PilB
D HM1_0251 type ii secretion system protein, putative K02653 pilC; type IV pilus assembly protein PilC
D HM1_0259 type ii secretion system f domain protein K02653 pilC; type IV pilus assembly protein PilC
D HM1_0256 type iv pilus assembly protein pilm K02662 pilM; type IV pilus assembly protein PilM
D HM1_0261 pilN; fimbrial assembly protein piln, putative K02663 pilN; type IV pilus assembly protein PilN
D HM1_0254 pilN; fimbrial assembly protein piln, putative K02663 pilN; type IV pilus assembly protein PilN
D HM1_0250 pilT; twitching motility protein pilt, putative K02669 pilT; twitching motility protein PilT
D HM1_0265 pilin assembly protein, putative K08084 fimT; type IV fimbrial biogenesis protein FimT
D HM1_0585 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D HM1_0587 type ii/iv secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D HM1_2092 yggt family protein, putative K02221 yggT; YggT family protein
D HM1_2610 competence protein K02237 comEA; competence protein ComEA
D HM1_1092 comE; come operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HM1_2423 DNA internalization-related competence protein comec/rec2 K02238 comEC; competence protein ComEC
D HM1_0097 metallo beta-lactamase domain protein K02238 comEC; competence protein ComEC
D HM1_1198 conserved hypothetical protein K02240 comFA; competence protein ComFA
D HM1_0267 conserved hypothetical protein K02241 comFB; competence protein ComFB
D HM1_2243 flhA; flagellar biosynthesis protein flha K02400 flhA; flagellar biosynthesis protein FlhA
D HM1_2242 flhB; flagellar biosynthetic protein flhb, putative K02401 flhB; flagellar biosynthesis protein FlhB
D HM1_1254 flagellar biosynthesis protein, putative K04061 flhB2; flagellar biosynthesis protein
D HM1_2194 flhb domain protein, putative K04061 flhB2; flagellar biosynthesis protein
D HM1_2221 fliF; flagellar m-ring protein flif, putative K02409 fliF; flagellar M-ring protein FliF
D HM1_2223 fliH; flagellar assembly protein flih, putative K02411 fliH; flagellar assembly protein FliH
D HM1_2224 fliI; flagellar protein export ATPase flii, putative K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HM1_2236 fliN; flagellar motor switch protein flin, putative K02417 fliN; flagellar motor switch protein FliN
D HM1_2238 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D HM1_2239 fliP; flagellar biosynthetic protein flip K02419 fliP; flagellar biosynthesis protein FliP
D HM1_2240 fliQ; flagellar biosynthetic protein fliq, putative K02420 fliQ; flagellar biosynthesis protein FliQ
D HM1_2241 fliR; flagellar biosynthetic protein flir K02421 fliR; flagellar biosynthesis protein FliR
D HM1_0622 trag/trad family protein, putative K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D HM1_1266 secA; preprotein translocase, seca subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HM1_1840 secD; protein-export membrane protein secd K03072 secD; preprotein translocase subunit SecD
D HM1_1363 secE; sece subunit of protein translocation complex, putative K03073 secE; preprotein translocase subunit SecE
D HM1_1841 secF; protein-export membrane protein secf K03074 secF; preprotein translocase subunit SecF
D HM1_1317 secG; preprotein translocase, secg subunit K03075 secG; preprotein translocase subunit SecG
D HM1_1398 secY; preprotein translocase, secy subunit K03076 secY; preprotein translocase subunit SecY
D HM1_2182 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HM1_2174 ftsY; signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D HM1_1837 yajC; preprotein translocase, yajc subunit K03210 yajC; preprotein translocase subunit YajC
D HM1_0910 spoIIIJ; stage iii sporulation protein j/oxaa-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HM1_1959 twin-arginine translocation domain protein K03116 tatA; sec-independent protein translocase protein TatA
D HM1_3059 twin-arginine translocation domain protein K03116 tatA; sec-independent protein translocase protein TatA
D HM1_1319 twin-arginine translocation protein tatb K03117 tatB; sec-independent protein translocase protein TatB
D HM1_1950 tatC; sec-independent protein translocase tatc K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hmo02042]
D HM1_3138 phospholipase C zinc-binding domain protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:hmo02022]
D HM1_2079 signal transduction histidine kinase, putative K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HM1_2078 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D HM1_2813 resD; two-component response regulator resd K07775 resD; two-component system, OmpR family, response regulator ResD
D HM1_1809 transcriptional regulator, putative K07775 resD; two-component system, OmpR family, response regulator ResD
D HM1_1536 signal transduction histidine kinase, putative K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HM1_1195 sensor histidine kinase, putative K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D HM1_1059 sensor histidine kinase domain protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_1619 sensor histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_2587 signal transduction histidine kinase, putative K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D HM1_1074 response regulator receiver domain protein, putative K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D HM1_1714 spo0F; stage 0 sporulation protein f, putative K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D HM1_0304 spo0A; stage 0 sporulation protein a K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D HM1_2666 sensor protein lyts K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D HM1_2665 sensory transduction protein lytt K07705 lytT; two-component system, LytTR family, response regulator LytT
D HM1_1676 lytS; sensor protein lyts K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D HM1_1449 sensory transduction protein lytt K02477 K02477; two-component system, LytTR family, response regulator
D HM1_1290 sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D HM1_0404 two component, sigma54 specific, transcriptional regulator, fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D HM1_2626 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2026 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2247 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_1416 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2237 cheY; response regulator receiver domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2020 two-component response regulator, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2627 cheY; response regulator receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2246 cheB; chemotaxis response regulator protein-glutamate methylesterase, cheb, putative K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HM1_2027 cheB; chemotaxis response regulator protein-glutamate methylesterase, cheb K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HM1_0196 sensory transduction histidine kinase, putative K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D HM1_2022 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D HM1_0558 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D HM1_0069 response regulator receiver with antar domain K22010 pdtaR; two-component system, response regulator PdtaR
D HM1_2516 response regulator receiver with antar domain K22010 pdtaR; two-component system, response regulator PdtaR
D HM1_0559 signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:hmo02035]
D HM1_2626 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2026 cheA; chea signal transduction histidine kinase, putative K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_2247 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_1416 cheA; chea signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D HM1_1703 cheW; purine-binding chemotaxis protein chew K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_2248 cheW; purine-binding chemotaxis protein chew K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_2024 chew-like family protein K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_1415 cheW; purine-binding chemotaxis protein chew, putative K03408 cheW; purine-binding chemotaxis protein CheW
D HM1_1953 cheC; chemotaxis protein chec K03410 cheC; chemotaxis protein CheC
D HM1_2021 chec-like family protein K03410 cheC; chemotaxis protein CheC
D HM1_0441 cheC; chemotaxis protein chec K03410 cheC; chemotaxis protein CheC
D HM1_1954 cheD; chemotaxis protein ched K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D HM1_2249 cheD; chemotaxis protein ched K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D HM1_2463 cheR; chemotaxis protein methyltransferase cher, putative K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HM1_2023 methylase of chemotaxis methyl-accepting protein, putative K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D HM1_2246 cheB; chemotaxis response regulator protein-glutamate methylesterase, cheb, putative K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HM1_2027 cheB; chemotaxis response regulator protein-glutamate methylesterase, cheb K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D HM1_0196 sensory transduction histidine kinase, putative K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D HM1_2237 cheY; response regulator receiver domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2020 two-component response regulator, putative K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_2627 cheY; response regulator receiver domain protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D HM1_0306 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_2786 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0497 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0164 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0843 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_1418 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_1661 conserved hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0556 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_2119 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_3092 methyl-accepting chemotaxis signaling protein K03406 mcp; methyl-accepting chemotaxis protein
D HM1_0413 methyl-accepting chemotaxis protein K06595 hemAT; heam-based aerotactic trancducer
D HM1_1276 conserved domain protein K06595 hemAT; heam-based aerotactic trancducer
D HM1_2223 fliH; flagellar assembly protein flih, putative K02411 fliH; flagellar assembly protein FliH
D HM1_2224 fliI; flagellar protein export ATPase flii, putative K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D HM1_2225 fliJ; flagellar export protein flij, putative K02413 fliJ; flagellar protein FliJ
D HM1_2238 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D HM1_2239 fliP; flagellar biosynthetic protein flip K02419 fliP; flagellar biosynthesis protein FliP
D HM1_2240 fliQ; flagellar biosynthetic protein fliq, putative K02420 fliQ; flagellar biosynthesis protein FliQ
D HM1_2241 fliR; flagellar biosynthetic protein flir K02421 fliR; flagellar biosynthesis protein FliR
D HM1_2243 flhA; flagellar biosynthesis protein flha K02400 flhA; flagellar biosynthesis protein FlhA
D HM1_2242 flhB; flagellar biosynthetic protein flhb, putative K02401 flhB; flagellar biosynthesis protein FlhB
D HM1_2222 fliG; flagellar motor switch protein flig K02410 fliG; flagellar motor switch protein FliG
D HM1_2233 fliM; flagellar motor switch protein flim K02416 fliM; flagellar motor switch protein FliM
D HM1_2236 fliN; flagellar motor switch protein flin, putative K02417 fliN; flagellar motor switch protein FliN
D HM1_2221 fliF; flagellar m-ring protein flif, putative K02409 fliF; flagellar M-ring protein FliF
D HM1_2232 fliL; flagellar basal body-associated protein flil, putative K02415 fliL; flagellar protein FliL
D HM1_2220 fliE; flagellar hook-basal body complex protein flie, putative K02408 fliE; flagellar hook-basal body complex protein FliE
D HM1_2227 fliK; flagellar hook-length control protein flik, putative K02414 fliK; flagellar hook-length control protein FliK
D HM1_2218 flgB; flagellar basal-body rod protein flgb, putative K02387 flgB; flagellar basal-body rod protein FlgB
D HM1_2219 flgC; flagellar basal-body rod protein flgc, putative K02388 flgC; flagellar basal-body rod protein FlgC
D HM1_2228 flagellar hook capping protein, putative K02389 flgD; flagellar basal-body rod modification protein FlgD
D HM1_1116 flagellar basal-body rod protein, putative K02391 flgF; flagellar basal-body rod protein FlgF
D HM1_1117 flgG; flagellar basal-body rod protein flgg, putative K02392 flgG; flagellar basal-body rod protein FlgG
D HM1_0498 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D HM1_2230 flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D HM1_1205 flgK; flagellar hook-associated protein flgk, putative K02396 flgK; flagellar hook-associated protein 1
D HM1_1206 flgL; flagellar hook-associated protein 3, putative K02397 flgL; flagellar hook-associated protein 3 FlgL
D HM1_1250 hag; flagellin protein K02406 fliC; flagellin
D HM1_1210 fliC; flagellin protein flic K02406 fliC; flagellin
D HM1_1627 filD; flagellar hook-associated protein 2, putative K02407 fliD; flagellar hook-associated protein 2
D HM1_1211 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D HM1_1251 fliS; flagellar protein flis K02422 fliS; flagellar secretion chaperone FliS
D HM1_1213 fliS; flagellar protein flis K02422 fliS; flagellar secretion chaperone FliS
D HM1_2251 fliA; RNA polymerase sigma factor, flia/whig family K02405 fliA; RNA polymerase sigma factor FliA
D HM1_1504 motA; flagellar motor component mota, putative K02556 motA; chemotaxis protein MotA
D HM1_1505 motB; flagellar motor protein motb, putative K02557 motB; chemotaxis protein MotB
D HM1_1208 conserved hypothetical protein K13626 fliW; flagellar assembly factor FliW
D HM1_1201 flgM; negative regulator of flagellin synthesis, flgm, putative K02398 flgM; negative regulator of flagellin synthesis FlgM
D HM1_1215 flaG; flagellar protein flag, putative K06603 flaG; flagellar protein FlaG
D HM1_2231 flbD; flagellar protein K02385 flbD; flagellar protein FlbD
D HM1_2244 GTP-binding signal recognition particle protein, putative K02404 flhF; flagellar biosynthesis protein FlhF
D HM1_2245 cobq/cobb/mind/para nucleotide binding domain protein K04562 flhG; flagellar biosynthesis protein FlhG
D HM1_0250 pilT; twitching motility protein pilt, putative K02669 pilT; twitching motility protein PilT
D HM1_0249 type ii secretion system protein e, putative K02652 pilB; type IV pilus assembly protein PilB
D HM1_0251 type ii secretion system protein, putative K02653 pilC; type IV pilus assembly protein PilC
D HM1_0259 type ii secretion system f domain protein K02653 pilC; type IV pilus assembly protein PilC
D HM1_0253 peptidase a24a, prepilin type iv peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HM1_0584 comC; type iv prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HM1_0261 pilN; fimbrial assembly protein piln, putative K02663 pilN; type IV pilus assembly protein PilN
D HM1_0254 pilN; fimbrial assembly protein piln, putative K02663 pilN; type IV pilus assembly protein PilN
D HM1_0256 type iv pilus assembly protein pilm K02662 pilM; type IV pilus assembly protein PilM
D HM1_0585 conserved hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D HM1_0587 type ii/iv secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hmo04812]
D HM1_1425 ammecr1-like protein K06990 MEMO1; MEMO1 family protein
D HM1_2731 cell shape determining protein, mreb/mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D HM1_1114 cell shape determining protein, mreb/mrl family, putative K03569 mreB; rod shape-determining protein MreB and related proteins
D HM1_2411 hypothetical protein K18640 parM; plasmid segregation protein ParM
D HM1_0615 hypothetical protein K18640 parM; plasmid segregation protein ParM
D HM1_2064 ftsZ; cell division protein ftsz K03531 ftsZ; cell division protein FtsZ
D HM1_2726 minC; septum site-determining protein minc K03610 minC; septum site-determining protein MinC
D HM1_2725 minD; septum site-determining protein mind K03609 minD; septum site-determining protein MinD
D HM1_2724 minE; cell division topological specificity factor mine, putative K03608 minE; cell division topological specificity factor
D HM1_0915 cobyrinic acid a,c-diamide synthase, putative K03496 parA; chromosome partitioning protein
D HM1_0916 parB; chromosome partitioning protein parb, putative K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hmo04147]
D HM1_0015 htpG; heat shock protein htpg K04079 HSP90A; molecular chaperone HtpG
D HM1_1605 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_1316 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HM1_2603 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1602 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1311 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HM1_1603 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HM1_1312 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HM1_0076 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HM1_1600 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HM1_2383 renal dipeptidase family protein, putative K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D HM1_1422 groEL; chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HM1_2437 dnaK; chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D HM1_1300 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HM1_2408 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HM1_1376 tuf; translation elongation factor tu K02358 tuf; elongation factor Tu
D HM1_2442 hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HM1_2756 ldh; l-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HM1_0075 lcfA; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_0197 fadD; long-chain-fatty-acid-coa ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D HM1_0896 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D HM1_2541 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D HM1_1399 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HM1_1460 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D HM1_1436 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D HM1_2642 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D HM1_1596 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HM1_2353 glnA; glutamine synthetase, type i K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HM1_1968 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D HM1_2777 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HM1_0851 serA; d-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D HM1_3106 purH; bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HM1_0891 etfA; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D HM1_1604 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HM1_1313 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:hmo02048]
D HM1_0516 cas1; crispr-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D HM1_0186 cas1; crispr-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D HM1_0517 cas2; crispr-associated protein cas2 K09951 cas2; CRISPR-associated protein Cas2
D HM1_0510 cas3; crispr-associated helicase cas3, putative K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D HM1_0181 cas3; crispr-associated helicase cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D HM1_0519 crispr-associated protein, af1879 family K19085 csa1; CRISPR-associated protein Csa1
D HM1_0512 crispr-associated negative autoregulator, putative K19075 cst2; CRISPR-associated protein Cst2
D HM1_0518 cas4; crispr-associated protein cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D HM1_0182 crispr-associated protein, ct1972 family, putative K19123 casA; CRISPR system Cascade subunit CasA
D HM1_0183 crispr-associated protein, ct1973 family, putative K19046 casB; CRISPR system Cascade subunit CasB
D HM1_0184 crispr-associated protein, ct1973 family, putative K19124 casC; CRISPR system Cascade subunit CasC
D HM1_0185 cas5; crispr-associated protein cas5 K19125 casD; CRISPR system Cascade subunit CasD
D HM1_3070 hsdR; type i site-specific deoxyribonuclease, hsdr family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HM1_0631 type i restriction-modification system, r subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HM1_0633 type i restriction modification DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HM1_3075 n-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HM1_0632 type i restriction-modification system, m subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HM1_0574 dam; d12 class n6 adenine-specific DNA methyltransferase superfamily K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HM1_1715 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HM1_3037 DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HM1_2947 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_2858 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HM1_3003 type iii restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D HM1_2924 type iii restriction enzyme, res subunit, putative K01156 res; type III restriction enzyme [EC:3.1.21.5]
D HM1_3004 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HM1_2925 DNA methylase, putative K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HM1_2017 GTPase subunit of restriction endonuclease, putative K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D HM1_1709 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D HM1_1708 helix-turn-helix domain protein, copg family, putative K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D HM1_2851 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D HM1_2064 ftsZ; cell division protein ftsz K03531 ftsZ; cell division protein FtsZ
D HM1_2731 cell shape determining protein, mreb/mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D HM1_1114 cell shape determining protein, mreb/mrl family, putative K03569 mreB; rod shape-determining protein MreB and related proteins
D HM1_2791 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D HM1_1864 nifS; cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:hmo04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:hmo04090]
C 01504 Antimicrobial resistance genes [BR:hmo01504]
D HM1_2907 peptidase m56, blar1 domain protein K02172 blaR1; bla regulator protein blaR1
D HM1_2920 peptidase m56, blar1 domain protein K02172 blaR1; bla regulator protein blaR1
D HM1_2921 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D HM1_2490 beta-lactamase protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D HM1_1132 hypothetical protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hmo00537]
D HM1_2777 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D HM1_2383 renal dipeptidase family protein, putative K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hmo03100]
D HM1_0564 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_3084 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_2288 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_0874 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_1008 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_1818 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_2830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_0801 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HM1_0468 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_0827 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_0828 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_2307 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_2838 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_1003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_2347 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HM1_1334 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HM1_2843 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HM1_1820 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HM1_2358 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HM1_0570 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HM1_2302 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HM1_0979 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HM1_1759 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HM1_2294 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HM1_2849 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HM1_1763 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HM1_0566 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HM1_2846 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HM1_2298 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HM1_2592 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HM1_0568 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_2844 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_2300 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_0978 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_0705 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_2589 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HM1_2839 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2306 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_0121 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2594 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2835 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2526 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2292 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_1761 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HM1_2293 tRNA-His K14226 tRNA-His; tRNA His
D HM1_2595 tRNA-His K14226 tRNA-His; tRNA His
D HM1_1817 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HM1_2831 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HM1_1764 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_0469 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2528 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2522 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2492 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_0122 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2305 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_2836 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HM1_0567 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HM1_2299 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HM1_2593 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HM1_2845 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HM1_0707 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_2519 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_2840 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_0708 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_1821 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_2359 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_2842 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_1996 tRNA-Met K14230 tRNA-Met; tRNA Met
D HM1_1760 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HM1_2590 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HM1_2296 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HM1_0467 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2304 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_0398 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2837 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2531 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2291 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HM1_2303 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_2841 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_0845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_0825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_2290 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_0815 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HM1_2523 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_2308 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_1496 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_0124 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_2479 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HM1_1004 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HM1_2524 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HM1_0397 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HM1_2297 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HM1_2847 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HM1_2591 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HM1_0569 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2301 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2529 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2295 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2518 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2346 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_2848 tRNA-Val K14237 tRNA-Val; tRNA Val
D HM1_0934 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D HM1_1006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_3087 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2286 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2354 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_1815 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_0562 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_0876 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_2833 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HM1_3083 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2829 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_1009 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2289 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_1819 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_2357 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_0873 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_0565 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HM1_0563 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_1816 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_0875 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2355 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_3085 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2832 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_1007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_2287 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HM1_3156 ssra K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HM1_2672 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D HM1_0645 conserved hypothetical protein K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D HM1_0482 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit, putative K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D HM1_1466 oorA; 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D HM1_0481 oorB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit, putative K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D HM1_1467 oorB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D HM1_1508 pyridine nucleotide-disulphide oxidoreductase, putative K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D HM1_2995 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HM1_1029 nuoG; proton-translocating NADH-ubiquinone oxidoreductase 75 kd, chain g K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D HM1_0289 fad/nad-binding oxidoreductase, putative K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HM1_2076 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein, putative K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HM1_1426 pyruvate formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HM1_0388 thump domain protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D HM1_2365 acuA; acetoin utilization protein, subunit a K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D HM1_2041 glycosyl transferase, group 1 family protein, putative K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D HM1_1639 conserved hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D HM1_0980 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HM1_2673 conserved hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D HM1_2460 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D HM1_2936 polA; DNA polymerase i, putative K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D HM1_0172 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_0747 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_0937 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_0935 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_1336 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_0030 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_0639 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_0383 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_1635 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_1663 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_1909 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_2551 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_2574 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_2596 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_2614 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_2660 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_2708 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_3100 reverse transcriptase (RNA-dependent DNA polymerase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HM1_1347 DNA-binding protein, putative K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D HM1_1522 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D HM1_0320 spoIIAB; anti-sigma f factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D HM1_1343 ATP:guanido phosphotransferase, putative K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D HM1_0673 conserved hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D HM1_0680 spoIIE; stage ii sporulation protein e/serine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D HM1_0436 conserved domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HM1_2562 phosphoesterase php, n-terminal, putative K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D HM1_0243 yqeG; had superfamily (subfamily iiia) phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D HM1_0972 dhh subfamily 1 protein, putative K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D HM1_2447 conserved hypothetical protein, contains hdig, hd domains, putative membrane protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D HM1_0751 hydrolase, tatd family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HM1_0125 tatd deoxyribonuclease family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HM1_0745 primase-like protein, putative K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D HM1_2867 n-acetylmuramoyl-l-alanine amidase precursor, putative K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2976 n-acetylmuramoyl-l-alanine amidase domain protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HM1_2132 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HM1_0945 polysaccharide deacetylase, putative K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HM1_2361 polysaccharide deacetylase, putative K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HM1_2040 conserved hypothetical protein, possible glcnac-pi de-n-acetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D HM1_2620 polysaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D HM1_2191 polysaccharide deacetylase, putative K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D HM1_1087 low molecular weight protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D HM1_2342 spIB; spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D HM1_1705 yjef family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D HM1_1687 conserved hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D HM1_1640 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D HM1_0899 mutB; methylmalonyl-coa mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D HM1_0162 hgdC; activator of (r)-2-hydroxyglutaryl-coa dehydratase domain protein K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D HM1_0462 hgdC; activator of (r)-2-hydroxyglutaryl-coa dehydratase domain protein K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D HM1_2122 calcium-translocating p-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HM1_2793 cadA; cadmium-translocating p-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D HM1_3020 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D HM1_2366 acuB; acetoin utilization protein, subunit b K04767 acuB; acetoin utilization protein AcuB
D HM1_1720 cbs domain protein K04767 acuB; acetoin utilization protein AcuB
D HM1_2367 acuC; acetoin utilization protein, subunit c K04768 acuC; acetoin utilization protein AcuC
D HM1_0362 conserved hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D HM1_2509 conserved hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D HM1_0435 rubrerythrin K19824 fprB; rubrerythrin
D HM1_2003 fdhD; formate dehydrogenase family accessory protein fdhd K02379 fdhD; FdhD protein
D HM1_0701 cyhA; 18 kda cytochrome c553 K12263 cccB; cytochrome c551
D HM1_1865 nitrogen-fixing nifu-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D HM1_0861 nifX; nifx K02596 nifX; nitrogen fixation protein NifX
D HM1_0859 nifB; nifb K02585 nifB; nitrogen fixation protein NifB
D HM1_0862 nifN; nifn K02592 nifN; nitrogenase molybdenum-iron protein NifN
D HM1_0863 nifE; nife K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D HM1_1955 ferredoxin, putative K02574 napH; ferredoxin-type protein NapH
D HM1_0892 etfB; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D HM1_2089 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D HM1_0237 cwlJ; cell wall hydrolase K01449 cwlJ; cell wall hydrolase
D HM1_2771 sleB; spore cortex-lytic enzyme prepeptide K01449 cwlJ; cell wall hydrolase
D HM1_2512 sleB; spore cortex-lytic enzyme prepeptide K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D HM1_2004 mobB; molybdopterin-guanine dinucleotide biosynthesis protein b K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D HM1_1942 streptomyces cyclase/dehydrase, putative K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HM1_0868 nifI_1; nitrogen regulatory protein p-ii K02589 nifHD1; nitrogen regulatory protein PII 1
D HM1_0867 nifI_2; nitrogen regulatory protein p-ii K02590 nifHD2; nitrogen regulatory protein PII 2
D HM1_0392 conserved domain protein K06959 tex; protein Tex
D HM1_2126 conserved hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D HM1_0902 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D HM1_2504 metallo-beta-lactamase family protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D HM1_1342 uvrb/uvrc domain protein K19411 mcsA; protein arginine kinase activator
D HM1_0470 tig; trigger factor K03545 tig; trigger factor
D HM1_1322 smpB; ssra-binding protein K03664 smpB; SsrA-binding protein
D HM1_1485 hypC; hydrogenase assembly chaperone hypc/hupf K04653 hypC; hydrogenase expression/formation protein HypC
D HM1_1486 hypD; hydrogenase expression/formation protein hypd K04654 hypD; hydrogenase expression/formation protein HypD
D HM1_1487 hypE; hydrogenase expression/formation protein hype K04655 hypE; hydrogenase expression/formation protein HypE
D HM1_1484 hypF; [nife] hydrogenase maturation protein hypf K04656 hypF; hydrogenase maturation protein HypF
D HM1_2208 mg chelatase, subunit chli, putative K07391 comM; magnesium chelatase family protein
D HM1_1961 ccsB; cytochrome c biogenesis protein ccsb, putative K07399 resB; cytochrome c biogenesis protein
D HM1_2638 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
D HM1_2639 adhP; alcohol dehydrogenase, putative K07402 xdhC; xanthine dehydrogenase accessory factor
D HM1_2352 hypothetical protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D HM1_1453 resolvase, n terminal domain K07450 K07450; putative resolvase
D HM1_2732 radC; DNA repair protein radc K03630 radC; DNA repair protein RadC
D HM1_0114 base excision repair protein, hhh-gpd family K07457 K07457; endonuclease III related protein
D HM1_2207 conserved hypothetical protein K07460 yraN; putative endonuclease
D HM1_2210 DNA processing protein dpra, putative K04096 smf; DNA processing protein
D HM1_2414 ATPase, putative K07478 ycaJ; putative ATPase
D HM1_2896 primase, putative K06919 K06919; putative DNA primase/helicase
D HM1_0155 transposase K07483 K07483; transposase
D HM1_0150 transposase K07483 K07483; transposase
D HM1_1160 transposase, putative K07483 K07483; transposase
D HM1_1154 transposase, putative K07483 K07483; transposase
D HM1_0933 transposase K07483 K07483; transposase
D HM1_0019 transposase K07483 K07483; transposase
D HM1_0523 transposase K07483 K07483; transposase
D HM1_1560 transposase K07483 K07483; transposase
D HM1_0927 transposase K07485 K07485; transposase
D HM1_1871 transposase, is116/is110/is902 family, putative K07486 K07486; transposase
D HM1_3055 transposase, is605 family, orfb K07496 K07496; putative transposase
D HM1_0151 integrase, catalytic region K07497 K07497; putative transposase
D HM1_0159 transposase, putative K07497 K07497; putative transposase
D HM1_1225 conserved hypothetical protein K07497 K07497; putative transposase
D HM1_1155 transposase, putative K07497 K07497; putative transposase
D HM1_0932 integrase, catalytic region K07497 K07497; putative transposase
D HM1_1445 transposase, putative K07497 K07497; putative transposase
D HM1_0524 integrase, catalytic region K07497 K07497; putative transposase
D HM1_1559 integrase, catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D HM1_1770 pspA; phage shock protein a K03969 pspA; phage shock protein A
D HM1_0810 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HM1_2621 amino acid abc transporter, permease protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HM1_2718 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HM1_0483 acriflavin resistance protein, putative K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D HM1_1576 acrb/acrd/acrf family transport protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D HM1_2746 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D HM1_0400 na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D HM1_1545 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D HM1_0808 bofA; sigmak-factor processing regulatory protein bofa K06317 bofA; inhibitor of the pro-sigma K processing machinery
D HM1_1324 cotJB; spore coat protein cotjb K06333 cotJB; spore coat protein JB
D HM1_1323 manganese-containing, non-heme catalase K06334 cotJC; spore coat protein JC
D HM1_0911 single-stranded nucleic acid binding r3h K06346 jag; spoIIIJ-associated protein
D HM1_0871 allophanate hydrolase subunit 2 K06350 kipA; antagonist of KipI
D HM1_0872 conserved hypothetical protein K06351 kipI; inhibitor of KinA
D HM1_1893 spmA; spore maturation protein a K06373 spmA; spore maturation protein A
D HM1_1894 spore maturation protein b, putative K06374 spmB; spore maturation protein B
D HM1_0319 spoIIAA; anti-sigma f factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D HM1_0443 anti-anti-sigma factor superfamily, putative K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D HM1_0310 spoIIM; stage ii sporulation protein m, putative K06384 spoIIM; stage II sporulation protein M
D HM1_2429 spoIIP; stage ii sporulation protein p K06385 spoIIP; stage II sporulation protein P
D HM1_0926 spoIIR; stage ii sporulation protein r K06387 spoIIR; stage II sporulation protein R
D HM1_0275 spoIIIAB; stage iii sporulation protein spoab K06391 spoIIIAB; stage III sporulation protein AB
D HM1_0276 spoIIIAC; stage iii sporulation protein ac, putative K06392 spoIIIAC; stage III sporulation protein AC
D HM1_0277 spoIIIAD; stage iii sporulation protein ad, putative K06393 spoIIIAD; stage III sporulation protein AD
D HM1_0278 spoIIIAE; stage iii sporulation protein ae, putative K06394 spoIIIAE; stage III sporulation protein AE
D HM1_0279 spoIIIAF; stage iii sporulation protein af, putative K06395 spoIIIAF; stage III sporulation protein AF
D HM1_0280 spoIIIAG; stage iii sporulation protein ag, putative K06396 spoIIIAG; stage III sporulation protein AG
D HM1_0281 spoIIIAH; stage iii sporulation protein ah domain protein, putative K06397 spoIIIAH; stage III sporulation protein AH
D HM1_1991 spoIVA; stage iv sporulation protein a K06398 spoIVA; stage IV sporulation protein A
D HM1_0629 conserved hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D HM1_0131 resolvase, n-terminal:recombinase, putative K06400 spoIVCA; site-specific DNA recombinase
D HM1_0133 resolvase, n-terminal:recombinase, putative K06400 spoIVCA; site-specific DNA recombinase
D HM1_2862 DNA recombinase, putative K06400 spoIVCA; site-specific DNA recombinase
D HM1_2865 DNA recombinase, putative K06400 spoIVCA; site-specific DNA recombinase
D HM1_2978 DNA recombinase, putative K06400 spoIVCA; site-specific DNA recombinase
D HM1_2980 DNA recombinase, putative K06400 spoIVCA; site-specific DNA recombinase
D HM1_1047 spoVAC; stage v sporulation protein ac K06405 spoVAC; stage V sporulation protein AC
D HM1_1048 spoVAD; stage v sporulation protein ad K06406 spoVAD; stage V sporulation protein AD
D HM1_1049 spoVAE; stage v sporulation protein ae, putative K06407 spoVAE; stage V sporulation protein AE
D HM1_0323 spoVAE; stage v sporulation protein ae K06407 spoVAE; stage V sporulation protein AE
D HM1_0324 spoVAF; stage v sporulation protein af K06408 spoVAF; stage V sporulation protein AF
D HM1_2328 spoVFA; dipicolinate synthase, a chain, putative K06410 spoVFA; dipicolinate synthase subunit A
D HM1_2329 spoVFB; dipicolinic acid synthetase, b subunit K06411 spoVFB; dipicolinate synthase subunit B
D HM1_0730 spoVG; septation protein spovg K06412 spoVG; stage V sporulation protein G
D HM1_0580 spoVG; spovg septation protein K06412 spoVG; stage V sporulation protein G
D HM1_2473 spoVG; stage v sporulation protein g K06412 spoVG; stage V sporulation protein G
D HM1_2474 spoVG; septation protein spovg K06412 spoVG; stage V sporulation protein G
D HM1_3124 conserved hypothetical protein K06412 spoVG; stage V sporulation protein G
D HM1_2577 spoVK; stage v sporulation protein k K06413 spoVK; stage V sporulation protein K
D HM1_0177 spoVR; stage v sporulation protein r K06415 spoVR; stage V sporulation protein R
D HM1_2172 spoVS; stage v sporulation protein s K06416 spoVS; stage V sporulation protein S
D HM1_2382 spoVS; stage v sporulation protein s K06416 spoVS; stage V sporulation protein S
D HM1_1257 spsF; spore coat polysaccharide biosynthesis protein f, putative K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D HM1_2102 acid soluble spore domain protein, putative K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D HM1_2001 conserved domain protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D HM1_1019 small, acid-soluble spore protein h 1 K06425 sspH; small acid-soluble spore protein H (minor)
D HM1_0740 conserved hypothetical protein K06436 yabG; spore coat assemly protein
D HM1_2445 yqfD; stage iv sporulation yqfd, putative K06438 yqfD; similar to stage IV sporulation protein
D HM1_1778 hypothetical protein K06294 gerD; spore germination protein D
D HM1_0476 gerAA; spore germination protein ka/spore germination protein aa K06295 gerKA; spore germination protein KA
D HM1_0940 gerKA; spore germination protein ka K06295 gerKA; spore germination protein KA
D HM1_3120 spore germination protein K06295 gerKA; spore germination protein KA
D HM1_0941 gerAC; spore germination protein b3, gerac, putative K06297 gerKC; spore germination protein KC
D HM1_0477 spore germination protein K06297 gerKC; spore germination protein KC
D HM1_0458 spore germination protein, putative K06298 gerM; germination protein M
D HM1_0238 conserved hypothetical protein K06305 gerQ; spore germination protein Q
D HM1_2513 conserved domain protein K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D HM1_1674 cstA; carbon starvation protein a K06200 cstA; carbon starvation protein
D HM1_2415 typA; GTP-binding protein typa K06207 typA; GTP-binding protein
D HM1_2098 act domain K07166 K07166; ACT domain-containing protein
D HM1_2446 phoH; phosphate starvation-induced protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D HM1_2270 phoH; phosphate starvation-induced protein K07175 phoH2; PhoH-like ATPase
D HM1_0165 serine protein kinase, putative K07180 prkA; serine protein kinase
D HM1_0409 hypothetical protein K07182 K07182; CBS domain-containing protein
D HM1_2341 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D HM1_0880 conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D HM1_3095 secretion protein hlyd, putative K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D HM1_2086 phoU; phosphate transport system regulatory protein phou K02039 phoU; phosphate transport system protein
D HM1_0382 bfd-like [2fe-2s]-binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D HM1_1952 hemerythrin family protein K07216 hr; hemerythrin
D HM1_2676 molybdenum cofactor biosynthesis protein, putative K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D HM1_3013 conserved hypothetical protein, putative membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HM1_0067 patatin-like phospholipase, putative K07001 K07001; NTE family protein
D HM1_1458 conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D HM1_1303 integral membrane protein K08972 K08972; putative membrane protein
D HM1_2428 conserved hypothetical protein K08972 K08972; putative membrane protein
D HM1_0956 conserved hypothetical protein K08986 ycgQ; putative membrane protein
C 99997 Function unknown
D HM1_0982 radical sam protein, putative K06871 K06871; uncharacterized protein
D HM1_1643 conserved hypothetical protein containing a thioredoxin domain K06888 K06888; uncharacterized protein
D HM1_2783 ATPase, putative K06923 K06923; uncharacterized protein
D HM1_0823 CoA-binding domain protein, putative K06929 K06929; uncharacterized protein
D HM1_0671 conserved domain protein K06950 K06950; uncharacterized protein
D HM1_2184 conserved domain protein K06960 K06960; uncharacterized protein
D HM1_1360 duf901 protein K06962 K06962; uncharacterized protein
D HM1_2075 conserved hypothetical protein, possible neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D HM1_2655 gpr1/fun34/yaah family protein, putative K07034 K07034; uncharacterized protein
D HM1_2659 gpr1/fun34/yaah family protein, putative K07034 K07034; uncharacterized protein
D HM1_1783 hypothetical protein K07045 K07045; uncharacterized protein
D HM1_0674 nad dependent epimerase/dehydratase family protein K07071 K07071; uncharacterized protein
D HM1_0723 hypothetical protein K07074 K07074; uncharacterized protein
D HM1_2800 aldo/keto reductase:4fe-4S ferredoxin, iron-sulfur binding protein K07079 K07079; uncharacterized protein
D HM1_0955 abc transporter, permease protein, putative K07089 K07089; uncharacterized protein
D HM1_0779 permease K07089 K07089; uncharacterized protein
D HM1_0070 unknown yune-like protein, putative permease K07090 K07090; uncharacterized protein
D HM1_0454 permease, putative K07090 K07090; uncharacterized protein
D HM1_0455 permease, putative K07090 K07090; uncharacterized protein
D HM1_0407 metallophosphoesterase K07098 K07098; uncharacterized protein
D HM1_0772 tpr repeat, sel1 subfamily, putative K07126 K07126; uncharacterized protein
D HM1_1135 conserved hypothetical protein K07126 K07126; uncharacterized protein
D HM1_0619 conserved hypothetical protein K07126 K07126; uncharacterized protein
D HM1_1957 fad dependent oxidoreductase, putative K07137 K07137; uncharacterized protein
D HM1_1524 conserved hypothetical protein K07137 K07137; uncharacterized protein
D HM1_2043 4fe-4S ferredoxin, iron-sulfur binding domain protein K07138 K07138; uncharacterized protein
D HM1_3038 radical sam family protein K07139 K07139; uncharacterized protein
D HM1_0918 membrane protein, putative K07150 K07150; uncharacterized protein
D HM1_0909 conserved hypothetical protein K08998 K08998; uncharacterized protein
D HM1_1914 conserved hypothetical protein K09004 K09004; uncharacterized protein
D HM1_2443 gatb/yqey domain protein K09117 K09117; uncharacterized protein
D HM1_2565 conserved hypothetical protein, putative membrane protein K09118 K09118; uncharacterized protein
D HM1_2095 conserved hypothetical protein, uncharacterized acr, yggu family K09131 K09131; uncharacterized protein
D HM1_0796 conserved hypothetical protein K09137 K09137; uncharacterized protein
D HM1_2554 conserved hypothetical protein K09139 K09139; uncharacterized protein
D HM1_2099 conserved hypothetical protein K09157 K09157; uncharacterized protein
D HM1_1839 conserved hypothetical protein K09163 K09163; uncharacterized protein
D HM1_2134 conserved hypothetical protein K09729 K09729; uncharacterized protein
D HM1_2252 conserved hypothetical protein K09749 K09749; uncharacterized protein
D HM1_0106 conserved hypothetical protein K09764 K09764; uncharacterized protein
D HM1_1036 conserved hypothetical protein K09768 K09768; uncharacterized protein
D HM1_1253 conserved hypothetical protein K09770 K09770; uncharacterized protein
D HM1_1776 hypothetical protein K09776 K09776; uncharacterized protein
D HM1_0166 yhbH; stress response protein yhbh, putative K09786 K09786; uncharacterized protein
D HM1_2181 conserved hypothetical protein, putative helix-turn-helix protein, ylxm / p13 like protein K09787 K09787; uncharacterized protein
D HM1_2571 conserved hypothetical protein duf456 K09793 K09793; uncharacterized protein
D HM1_2549 hypothetical protein K09807 K09807; uncharacterized protein
D HM1_1079 conserved hypothetical protein K09928 K09928; uncharacterized protein
D HM1_2988 hypothetical protein K09942 K09942; uncharacterized protein
D HM1_0317 hypothetical protein K09979 K09979; uncharacterized protein
D HM1_2710 ribosomal protein, putative K07584 ysxB; uncharacterized protein
D HM1_2747 conserved hypothetical protein, possible phosphate transport regulator K07220 K07220; uncharacterized protein
D HM1_2311 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024