+D GENES KO #

  KEGG Orthology (KO) - Helicobacter pylori 51

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:hpd00010] D KHP_1003 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KHP_1062 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KHP_1402 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KHP_0173 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KHP_0193 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D KHP_0859 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KHP_0055 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KHP_0056 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D KHP_0907 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D KHP_0153 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KHP_0121 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D KHP_1011 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D KHP_1012 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D KHP_1009 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D KHP_1010 porD; pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D KHP_0728 oorA; OorA subunit of the 2-oxoglutarate oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D KHP_0727 oorB; OorB subunit of the 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D KHP_1004 cad; mannitol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KHP_0390 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KHP_1171 manB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:hpd00020] D KHP_1255 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D KHP_0548 acnB; aconitase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D KHP_1254 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D KHP_0728 oorA; OorA subunit of the 2-oxoglutarate oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D KHP_0727 oorB; OorB subunit of the 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D KHP_0726 oorC; OorC subunit of the 2-oxoglutarate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D KHP_0729 oorD; OorD subunit of the 2-oxoglutarate oxidoreductase K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D KHP_0191 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D KHP_0190 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D KHP_0192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D KHP_1218 fumC; fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D KHP_0090 mqo; malate:quinone oxireductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D KHP_1011 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D KHP_1012 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D KHP_1009 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D KHP_1010 porD; pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:hpd00030] D KHP_1062 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KHP_1001 g6pD; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KHP_1002 devB; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D KHP_1401 rpe; d-ribulose-5-phosphate 3 epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D KHP_0350 tktA; transketolase A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D KHP_1346 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D KHP_0744 lacA; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D KHP_1076 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D KHP_1171 manB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KHP_0584 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D KHP_1000 edd; 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D KHP_0999 eda; 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D KHP_0173 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KHP_1402 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:hpd00040] D KHP_0675 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KHP_1401 rpe; d-ribulose-5-phosphate 3 epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D KHP_0114 fucA; l-fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:hpd00051] D KHP_1171 manB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KHP_1239 algA; phosphomannose isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D KHP_1238 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D KHP_1237 fcl; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D KHP_0114 fucA; l-fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D KHP_1402 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KHP_0173 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KHP_0193 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D KHP_0744 lacA; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:hpd00052] D KHP_0995 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KHP_0675 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KHP_1171 manB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KHP_1003 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:hpd00500] D KHP_0675 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KHP_1171 manB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KHP_1003 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KHP_1062 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hpd00520] D KHP_1383 glmS; glucosamine fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D KHP_0078 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D KHP_0640 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D KHP_0673 murA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D KHP_1269 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D KHP_0646 wbpB; lipopolysaccharide biosynthesis protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D KHP_0488 flaA1; UDP-GlcNAc C6 dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D KHP_0990 sugar nucleotide biosynthesis K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92] D KHP_0320 flaG; flagellar biosynthesis protein G K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202] D KHP_0177 neuB; sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D KHP_1003 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KHP_1171 manB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KHP_0675 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KHP_0995 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KHP_1062 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KHP_1239 algA; phosphomannose isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D KHP_1238 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D KHP_1237 fcl; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00620 Pyruvate metabolism [PATH:hpd00620] D KHP_0390 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KHP_1011 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D KHP_1012 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D KHP_1009 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D KHP_1010 porD; pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D KHP_0728 oorA; OorA subunit of the 2-oxoglutarate oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D KHP_0727 oorB; OorB subunit of the 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D KHP_1004 cad; mannitol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KHP_0762 accA; acetyl-coenzyme A carboxylase A subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D KHP_0985 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KHP_0986 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KHP_0888 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D KHP_1118 dld; d-lactate dehydrogenase K18930 dld; D-lactate dehydrogenase D KHP_0515 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D KHP_0090 mqo; malate:quinone oxireductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D KHP_1218 fumC; fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D KHP_0191 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D KHP_0190 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D KHP_0192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D KHP_0121 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hpd00630] D KHP_0390 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KHP_1255 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D KHP_0548 acnB; aconitase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KHP_0809 glcD; glycolate oxidase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D KHP_0449 catalase K03781 katE; catalase [EC:1.11.1.6] D KHP_0457 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D KHP_0806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KHP_0182 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KHP_0999 eda; 2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D KHP_1284 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D KHP_1134 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:hpd00640] D KHP_0390 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KHP_1011 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D KHP_1012 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D KHP_1009 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D KHP_1010 porD; pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D KHP_0762 accA; acetyl-coenzyme A carboxylase A subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D KHP_0985 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KHP_0986 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KHP_0888 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D KHP_0548 acnB; aconitase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:hpd00650] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KHP_0191 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D KHP_0190 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D KHP_0192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D KHP_1011 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D KHP_1012 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D KHP_1009 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D KHP_1010 porD; pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D KHP_0728 oorA; OorA subunit of the 2-oxoglutarate oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D KHP_0727 oorB; OorB subunit of the 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D KHP_0631 scoA; Succinyl-CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D KHP_0630 scoB; Succinyl-CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism D KHP_0193 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:hpd00190] D KHP_1156 nqo7; NADH-ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D KHP_1157 nqo6; NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D KHP_1158 nqo5; NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D KHP_1159 nqo4; NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D KHP_1160 nuoE; NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D KHP_1161 nuoF; NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D KHP_1162 nqo3; NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D KHP_1163 nqo8; NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D KHP_1164 nqo9; NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D KHP_1165 nuoJ; NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D KHP_1166 nqo11; NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D KHP_1167 nqo12; NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D KHP_1168 nqo13; NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D KHP_1169 nqo14; NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D KHP_0191 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D KHP_0190 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D KHP_0192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D KHP_1422 fbcF; ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D KHP_1423 fbcH; ubiquinol cytochrome c oxidoreductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D KHP_1424 petC; ubiquinol cytochrome c oxidoreductase, cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D KHP_0143 fixN; cytochrome c oxidase heme b and copper-binding subunit K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D KHP_0144 fixO; cytochrome c oxidase monoheme subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D KHP_0145 ccoQ; cytochrome c oxidase subunit Q K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D KHP_0146 fixP; cytochrome c oxidase diheme subunit K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D KHP_1123 cytochrome c553 K08738 CYC; cytochrome c D KHP_1032 atpA; ATP synthase F1 alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D KHP_1030 atpD; ATP synthase F1 beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D KHP_1031 atpG; ATP synthase F1 gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D KHP_1029 atpC; ATP synthase F1 epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D KHP_0499 atpB; ATP synthase F0, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D KHP_1034 atpF; ATP synthase F0 B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D KHP_1035 atpF'; ATP synthase F0 B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D KHP_1109 atpE; ATP synthase F0 C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D KHP_0699 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D KHP_0424 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:hpd00710] D KHP_0056 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D KHP_0859 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KHP_0055 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KHP_0173 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KHP_1402 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KHP_0350 tktA; transketolase A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D KHP_0744 lacA; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D KHP_0193 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D KHP_1401 rpe; d-ribulose-5-phosphate 3 epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D KHP_1346 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] C 00720 Other carbon fixation pathways [PATH:hpd00720] D KHP_1011 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D KHP_1012 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D KHP_1009 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D KHP_1010 porD; pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D KHP_0121 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D KHP_1218 fumC; fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D KHP_0191 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D KHP_0190 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D KHP_0192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KHP_0728 oorA; OorA subunit of the 2-oxoglutarate oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D KHP_0727 oorB; OorB subunit of the 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D KHP_0726 oorC; OorC subunit of the 2-oxoglutarate oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D KHP_0729 oorD; OorD subunit of the 2-oxoglutarate oxidoreductase K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D KHP_1254 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D KHP_0548 acnB; aconitase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D KHP_0762 accA; acetyl-coenzyme A carboxylase A subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D KHP_0985 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KHP_0986 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KHP_0888 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D KHP_0741 folD; methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D KHP_0390 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:hpd00680] D KHP_0182 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KHP_0153 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KHP_0173 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D KHP_1402 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KHP_0949 bisC; S/N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D KHP_0390 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KHP_1011 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D KHP_1012 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D KHP_1009 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D KHP_1010 porD; pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D KHP_0121 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D KHP_0907 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D KHP_0959 serA; 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KHP_0669 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:hpd00910] D KHP_1134 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D KHP_0554 hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D KHP_0976 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D KHP_0806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KHP_0004 cynT; beta-carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D KHP_1083 cah; alpha-carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:hpd00920] D KHP_1107 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KHP_0110 cysK; cysteine synthetase K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:hpd00061] D KHP_0762 accA; acetyl-coenzyme A carboxylase A subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D KHP_0985 accB; biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D KHP_0986 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D KHP_0888 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D KHP_0759 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D KHP_0094 fabD; malonyl coenzyme A-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D KHP_0201 fabH; beta-ketoacyl-acyl carrier protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KHP_0761 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KHP_0757 fabG; 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KHP_0027 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D KHP_0194 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:hpd00071] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:hpd00121] D KHP_0420 hdhA; 7 alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:hpd00561] D KHP_1004 cad; mannitol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D KHP_0200 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D KHP_1361 integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D KHP_0053 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D KHP_0622 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:hpd00564] D KHP_0899 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D KHP_1361 integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D KHP_0053 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D KHP_0622 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D KHP_0461 cdh; CDP-diglyceride hydrolase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D KHP_0215 cdsA; CDP-diacylglycerol synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D KHP_0364 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D KHP_0045 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D KHP_0418 pgsA; phosphatidylglycerophosphate synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D KHP_0589 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:hpd00230] D KHP_1076 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D KHP_1171 manB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D KHP_0584 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D KHP_1114 purD; glycinamide ribonucleotide synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D KHP_1013 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D KHP_0746 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D KHP_0868 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D KHP_1075 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D KHP_0498 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D KHP_0197 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D KHP_0591 gpt; xanthine-guanine phosphoribosyl transferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D KHP_0947 guaA; guanosine-5'-monophosphate synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D KHP_0476 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D KHP_0314 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D KHP_0645 nrdA; ribonucleoside-diphosphate reductase 1 alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D KHP_0991 nrdB; ribonucleoside-diphosphate reductase 1 beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D KHP_0552 spoT; ppGpp-3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D KHP_0276 gppA; guanosine pentaphosphate phosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D KHP_0253 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D KHP_0107 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D KHP_0702 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D KHP_0585 HIT family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D KHP_0075 ureB; urease B subunit/Urea amidohydrolase K01428 ureC; urease subunit alpha [EC:3.5.1.5] D KHP_0076 ureA; urease A subunit/Urea amidohydrolase K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:hpd00240] D KHP_0857 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D KHP_1133 pyrAa; carbamoyl-phosphate synthetase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D KHP_0354 pyrB; aspartate transcarbamoylase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D KHP_0264 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D KHP_0737 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D KHP_0423 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D KHP_1153 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D KHP_0005 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D KHP_0550 pyrH; uridine 5'-monophosphate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D KHP_0197 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D KHP_1136 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D KHP_0338 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D KHP_0868 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D KHP_0107 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D KHP_0984 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D KHP_0645 nrdA; ribonucleoside-diphosphate reductase 1 alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D KHP_0991 nrdB; ribonucleoside-diphosphate reductase 1 beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D KHP_1325 tmK; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D KHP_0467 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D KHP_1384 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D KHP_0997 short chain dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:hpd00250] D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KHP_0604 ansB; l-asparaginase type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D KHP_0306 N-carbomoyl-D-amino acid amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D KHP_1392 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D KHP_0672 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D KHP_0253 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D KHP_1013 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D KHP_0354 pyrB; aspartate transcarbamoylase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D KHP_0976 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D KHP_0065 putA; proline/delta 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D KHP_0806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KHP_0857 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D KHP_1133 pyrAa; carbamoyl-phosphate synthetase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D KHP_1383 glmS; glucosamine fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:hpd00260] D KHP_1125 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D KHP_1085 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D KHP_0506 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D KHP_0385 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D KHP_0101 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D KHP_0182 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KHP_0907 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D KHP_0959 serA; 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KHP_0669 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D KHP_0997 short chain dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D KHP_0364 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D KHP_0131 sdaA; L-serine/L-threonine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D KHP_1173 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D KHP_1174 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:hpd00270] D KHP_1107 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D KHP_0110 cysK; cysteine synthetase K01738 cysK; cysteine synthase [EC:2.5.1.47] D KHP_0109 metB; cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D KHP_0196 metK; s-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D KHP_0495 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D KHP_0093 mtn; 5'-methylthioadenosine nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30] D KHP_1406 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_1020 bsp6IM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0447 hpy99XIM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0060 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0108 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D KHP_1125 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D KHP_1085 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D KHP_0506 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D KHP_1319 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KHP_0131 sdaA; L-serine/L-threonine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D KHP_0959 serA; 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:hpd00280] D KHP_1319 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KHP_0631 scoA; Succinyl-CoA-transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D KHP_0630 scoB; Succinyl-CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hpd00290] D KHP_0323 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D KHP_1319 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:hpd00300] D KHP_0506 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D KHP_1125 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D KHP_1085 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D KHP_0421 dapA; dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D KHP_0808 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D KHP_0693 dapD; tetrahydrodipicolinate (THDP) N-succinyltransferase involved K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D KHP_0212 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D KHP_0752 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D KHP_0287 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D KHP_1345 murE; UDP-MurNac-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D KHP_0586 murF; UDP-MurNac-pentapeptide synthetase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:hpd00220] D KHP_1390 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D KHP_0075 ureB; urease B subunit/Urea amidohydrolase K01428 ureC; urease subunit alpha [EC:3.5.1.5] D KHP_0076 ureA; urease A subunit/Urea amidohydrolase K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D KHP_0806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KHP_0857 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D KHP_1133 pyrAa; carbamoyl-phosphate synthetase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D KHP_0976 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:hpd00330] D KHP_0937 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D KHP_1234 type II restriction endonuclease K10536 aguA; agmatine deiminase [EC:3.5.3.12] D KHP_0569 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D KHP_0495 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D KHP_0018 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D KHP_0291 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D KHP_1390 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D KHP_1054 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D KHP_0065 putA; proline/delta 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism [PATH:hpd00360] D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KHP_0881 dadA; d-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D KHP_0291 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:hpd00380] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KHP_0291 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D KHP_0449 catalase K03781 katE; catalase [EC:1.11.1.6] D KHP_0457 katA; catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hpd00400] D KHP_0133 aroF; tyrosine-regulated 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D KHP_0281 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D KHP_0397 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D KHP_1145 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D KHP_0156 aroK; shikimic acid kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71] D KHP_0955 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D KHP_0658 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D KHP_1178 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D KHP_1177 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D KHP_1176 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D KHP_0274 hypothetical protein K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D KHP_1175 trpC; n-(5'-phospho-ribosyl)anthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D KHP_1173 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D KHP_1174 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D KHP_0288 pheA; chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D KHP_0023 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:hpd00410] D KHP_1247 panD; aspartate alpha-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D KHP_0006 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:hpd00430] D KHP_1017 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KHP_1392 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:hpd00450] D KHP_0109 metB; cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D KHP_0503 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D KHP_1060 trxB_2; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D KHP_1365 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D KHP_0942 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:hpd00460] D KHP_1017 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KHP_0604 ansB; l-asparaginase type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D KHP_0182 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KHP_1134 amiF; formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:hpd00470] D KHP_0879 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D KHP_0588 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KHP_0770 glr; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D KHP_0822 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D KHP_0752 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D KHP_0287 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D KHP_0881 dadA; d-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:hpd00480] D KHP_1017 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KHP_0748 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D KHP_1254 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D KHP_1001 g6pD; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KHP_0495 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:hpd00540] D KHP_0028 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D KHP_0383 lpxC; UDP-3-0-acyl N-acetylglcosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D KHP_0195 lpxD; UDP-3-0-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D KHP_0962 hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D KHP_0465 lpxB; lipid A disaccharide synthetase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D KHP_0321 lpxK; tetraacyldisaccharide-1-P 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D KHP_1278 kpsF; polysialic acid capsule expression protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D KHP_0003 kdsA; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D KHP_1439 ABC transporter system inner membrane protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D KHP_0229 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D KHP_0895 kdtA; 3-deoxy-d-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D KHP_0278 ibpB; lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D KHP_0628 outer membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D KHP_0020 integral membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D KHP_0268 hypothetical protein K09778 lpxJ; Kdo2-lipid IVA 3' secondary acyltransferase [EC:2.3.1.-] D KHP_0019 hypothetical protein K12977 lpxE; lipid A 1-phosphatase [EC:3.1.3.-] D KHP_0739 hypothetical protein K23082 kdoH1; 3-deoxy-D-manno-octulosonic acid-hydrolase [EC:3.2.1.144] D KHP_0738 hypothetical protein K23083 kdoH2; 3-deoxy-D-manno-octulosonic acid-hydrolase D KHP_1448 hypothetical protein K23159 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D KHP_0475 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D KHP_0474 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D KHP_0472 hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D KHP_0473 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D KHP_0277 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D KHP_1087 rfaF; ADP-heptose-LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D KHP_1267 rfaJ; lipopolysaccharide 1,2-glycosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D KHP_0158 rfaJ1; LPS 1,2-glycosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D KHP_0396 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hpd00541] D KHP_0675 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D KHP_0995 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D KHP_1239 algA; phosphomannose isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D KHP_1238 gmd; GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D KHP_1237 fcl; GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D KHP_0640 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D KHP_0488 flaA1; UDP-GlcNAc C6 dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D KHP_0990 sugar nucleotide biosynthesis K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92] D KHP_0320 flaG; flagellar biosynthesis protein G K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202] D KHP_0177 neuB; sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D KHP_0646 wbpB; lipopolysaccharide biosynthesis protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] C 00550 Peptidoglycan biosynthesis [PATH:hpd00550] D KHP_0673 murA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D KHP_1269 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D KHP_0696 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D KHP_0822 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D KHP_1345 murE; UDP-MurNac-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D KHP_0588 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KHP_0586 murF; UDP-MurNac-pentapeptide synthetase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D KHP_1117 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D KHP_0479 integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D KHP_0823 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D KHP_1051 murG; UDP-N-acetylglucosamine lipidI transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D KHP_0721 pbp1A; penicillin-binding protein 1 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D KHP_1434 pbp2; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KHP_1426 ftsI; penicillin-binding protein 3 or FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:hpd00552] D KHP_0479 integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:hpd00543] D KHP_1107 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:hpd00730] D KHP_0484 thi; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D KHP_0220 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KHP_0343 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D KHP_0483 thiM; hyroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D KHP_0485 thiB; thiamin phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D KHP_1184 hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D KHP_0702 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D KHP_1182 tenA; transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:hpd00740] D KHP_0526 ribA; GTP-cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D KHP_0524 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D KHP_1357 ribD; riboflavin-specific deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D KHP_0002 ribE; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D KHP_1443 ribC; riboflavin synthase alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D KHP_0351 ribC; riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D KHP_0483 thiM; hyroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D KHP_1327 paaD; aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:hpd00750] D KHP_1451 pdxA; pyridoxal phosphate biosynthetic protein A K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D KHP_1450 pdxJ; pyridoxal phosphate biosynthetic protein J K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D KHP_0101 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:hpd00760] D KHP_0046 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D KHP_0047 nadC; quinolinate phosphoribosyl transferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D KHP_1075 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D KHP_0868 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D KHP_1229 nadD; nicotinate-nucleotide adenyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D KHP_0322 nadE; NH(3)-dependent NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D KHP_1155 hypothetical protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D KHP_1395 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:hpd00770] D KHP_0323 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D KHP_0377 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D KHP_0006 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D KHP_0470 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D KHP_0487 dfp; pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D KHP_1326 kdtB; lipopolysaccharide core biosynthesis protein K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D KHP_0496 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D KHP_0520 acpS; holo-acyl carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D KHP_1319 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KHP_1247 panD; aspartate alpha-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:hpd00780] D KHP_1150 bioC; biotin synthesis protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D KHP_0761 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KHP_0757 fabG; 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KHP_0027 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D KHP_0194 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D KHP_0720 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D KHP_0909 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D KHP_1252 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D KHP_1258 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6] D KHP_1038 birA; biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:hpd00790] D KHP_0866 folE_2; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D KHP_0897 hypothetical protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16] D KHP_1362 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D KHP_0399 folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D KHP_1128 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D KHP_1417 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D KHP_0526 ribA; GTP-cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D KHP_0524 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D KHP_0290 pabB; para-aminobenzoate (PABA)-synthetase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D KHP_0870 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D KHP_0871 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D KHP_0681 exsB; ExsB trans-regulatory protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D KHP_1264 hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D KHP_0559 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D KHP_0530 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D KHP_0528 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D KHP_0558 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:hpd00670] D KHP_0741 folD; methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D KHP_0182 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D KHP_1039 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D KHP_1384 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D KHP_1284 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D KHP_0565 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:hpd00860] D KHP_0440 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KHP_0238 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D KHP_0303 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D KHP_0161 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D KHP_0236 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D KHP_1120 hemD; uroporphyrinogen III cosynthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D KHP_0714 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D KHP_0656 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D KHP_1335 integral membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D KHP_0980 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D KHP_0311 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hpd00130] D KHP_0042 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D KHP_0960 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D KHP_1327 paaD; aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D KHP_1334 gerC2; methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D KHP_0549 hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D KHP_0667 hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D KHP_0265 detoxifying protein K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D KHP_0093 mtn; 5'-methylthioadenosine nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30] D KHP_0665 hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D KHP_0151 hypothetical protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:hpd00900] D KHP_0343 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D KHP_0216 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D KHP_0415 ispDF; methylerythritol-phosphate (MEP) cytidyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D KHP_1294 ispE; 4-disphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D KHP_0694 gcpE; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthetase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D KHP_0956 ispH; isoprenyl pyrophosphate/dimethylallyl diphosphate synthetase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KHP_1327 paaD; aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D KHP_0867 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D KHP_0239 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D KHP_1117 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D KHP_0350 tktA; transketolase A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:hpd00261] D KHP_1125 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D KHP_1085 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D KHP_0421 dapA; dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D KHP_0808 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:hpd00521] D KHP_1003 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D KHP_1171 manB; phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D KHP_1003 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:hpd00401] D KHP_0023 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D KHP_1178 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D KHP_1177 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D KHP_0094 fabD; malonyl coenzyme A-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D KHP_0757 fabG; 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KHP_0194 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D KHP_0759 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:hpd00999] D KHP_0196 metK; s-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D KHP_1145 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:hpd00362] D KHP_0862 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:hpd00627] D KHP_0291 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D KHP_1327 paaD; aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D KHP_0862 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation D KHP_1011 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D KHP_1012 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D KHP_1009 porG; pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D KHP_1010 porD; pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:hpd00643] D KHP_0291 amiE; aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation D KHP_0075 ureB; urease B subunit/Urea amidohydrolase K01428 ureC; urease subunit alpha [EC:3.5.1.5] D KHP_0076 ureA; urease A subunit/Urea amidohydrolase K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D KHP_0862 dmpI; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:hpd03020] D KHP_1092 rpoB; DNA-dependent RNA polymerase beta-beta prime subunit K13797 rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6] D KHP_1186 rpoA; alpha subunit of the DNA-dependent RNA polymerase core enzyme K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D KHP_0551 rpoZ; RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:hpd03010] D KHP_0957 rps1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D KHP_1408 rps2; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D KHP_1206 rps3; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D KHP_1187 rps4; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D KHP_1195 rps5; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D KHP_1142 rps6; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D KHP_1090 rps7; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D KHP_1198 rps8; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D KHP_0087 rps9; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D KHP_1213 rps10; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D KHP_1188 rps11; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D KHP_1091 rps12; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D KHP_1189 rps13; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D KHP_1199 rps14; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D KHP_0395 rps15; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D KHP_1047 rpS16; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D KHP_1203 rps17; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D KHP_1140 rps18; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D KHP_1208 rps19; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D KHP_0079 rps20; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D KHP_0756 rps21; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D KHP_1095 rpl1; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D KHP_1209 rpl2; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D KHP_1212 rpl3; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D KHP_1211 rpl4; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D KHP_1200 rpl5; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D KHP_1197 rpl6; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D KHP_1093 rpl12; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D KHP_0804 rpl9; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D KHP_1094 rpl10; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D KHP_1096 rpl11; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D KHP_0088 rpl13; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D KHP_1202 rpl14; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D KHP_1194 rpl15; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D KHP_1205 rpl16; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D KHP_1185 rpl17; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D KHP_1196 rpl18; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D KHP_1043 rpl19; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D KHP_0126 rpl20; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D KHP_0293 rpl21; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D KHP_1207 rpl22; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D KHP_1210 rpl23; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D KHP_1201 rpl24; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D KHP_1347 rpl25; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D KHP_0294 rpl27; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D KHP_0825 rpL28; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D KHP_1204 rpL29; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D KHP_0768 rpl31; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D KHP_0199 rpl32; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D KHP_1100 rpL33; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D KHP_1298 rpl34; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D KHP_0125 rpl35; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D KHP_1190 rpl36; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D KHP_rrnA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KHP_rrnB16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KHP_rrnA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KHP_rrnB23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KHP_rrnA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KHP_rrnB5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:hpd00970] D KHP_tRNAAla1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KHP_tRNAAla2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KHP_tRNAArg1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KHP_tRNAArg4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KHP_tRNAArg3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KHP_tRNAArg2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KHP_tRNAAsn1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D KHP_tRNAAsp1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D KHP_tRNACys1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D KHP_tRNAGln1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D KHP_tRNAGlu2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KHP_tRNAGlu1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KHP_tRNAGly1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KHP_tRNAGly2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KHP_tRNAHis1 tRNA-His K14226 tRNA-His; tRNA His D KHP_tRNAIle1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KHP_tRNALeu3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KHP_tRNALeu1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KHP_tRNALeu4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KHP_tRNALeu2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KHP_tRNALys1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D KHP_tRNAMet2 tRNA-Met K14230 tRNA-Met; tRNA Met D KHP_tRNAMet3 tRNA-Met K14230 tRNA-Met; tRNA Met D KHP_tRNAMet1 tRNA-Met K14230 tRNA-Met; tRNA Met D KHP_tRNAPhe1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D KHP_tRNAPro1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KHP_tRNAPro2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KHP_tRNASer2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KHP_tRNASer1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KHP_tRNASer3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KHP_tRNAThr1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D KHP_tRNAThr2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D KHP_tRNATrp1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D KHP_tRNATyr1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D KHP_tRNAVal1 tRNA-Val K14237 tRNA-Val; tRNA Val D KHP_tRNAVal2 tRNA-Val K14237 tRNA-Val; tRNA Val D KHP_0440 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KHP_0678 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D KHP_0497 gatA; Glu-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D KHP_0663 gatB; Glu-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D KHP_0908 gatC; Glu-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D KHP_1137 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D KHP_0703 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D KHP_0898 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D KHP_0905 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D KHP_0123 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D KHP_1331 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D KHP_1365 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D KHP_0832 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D KHP_0942 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KHP_1039 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D KHP_1049 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D KHP_1415 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D KHP_1273 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D KHP_0181 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D KHP_0312 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D KHP_0237 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D KHP_1086 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D KHP_0953 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D KHP_0954 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D KHP_0553 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D KHP_1149 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:hpd03060] D KHP_1193 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY D KHP_1099 secE; preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE D KHP_1151 secG; protein translocation protein K03075 secG; preprotein translocase subunit SecG D KHP_1412 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D KHP_1413 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D KHP_1411 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D KHP_1301 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D KHP_0541 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D KHP_1048 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D KHP_0563 ftsY; signal recognition particule receptor K03110 ftsY; fused signal recognition particle receptor D KHP_0313 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D KHP_0375 tatB; sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D KHP_0374 tatC; sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC D KHP_0742 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D KHP_0077 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:hpd04122] D KHP_0220 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KHP_0011 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D KHP_1227 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D KHP_0528 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D KHP_0559 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D KHP_0527 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D KHP_0530 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 03050 Proteasome C 03018 RNA degradation [PATH:hpd03018] D KHP_1124 invA; diadenosine polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D KHP_0153 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KHP_1110 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D KHP_1144 rnr; 3'-5' exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D KHP_0246 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D KHP_0769 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D KHP_0566 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D KHP_1279 ATP/GTP binding protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D KHP_0111 dnaK; chaperone and heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D KHP_0008 groEL; chaperone and heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KHP_0424 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D KHP_0680 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:hpd03030] D KHP_1400 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KHP_1311 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KHP_0608 dnaX; gamma and tau subunits of the DNA polymerase III holoenzyme K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KHP_1127 holB; delta prime subunit of the DNA polymerase III holoenzyme K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KHP_1143 holA; delta subunit of the DNA polymerase III holoenzyme K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KHP_0816 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KHP_0040 dnaB; DNA replicative helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D KHP_0010 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D KHP_1141 ssb; DNA helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D KHP_0660 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D KHP_1216 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D KHP_0705 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:hpd03410] D KHP_0733 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D KHP_0054 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D KHP_0141 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D KHP_0671 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D KHP_1378 exoA; exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D KHP_0337 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D KHP_0705 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:hpd03420] D KHP_1421 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D KHP_0618 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D KHP_1015 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D KHP_0507 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D KHP_1329 rep; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KHP_0851 pcrA; ATP-dependent single-stranded DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KHP_0705 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:hpd03430] D KHP_0698 mutS; DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D KHP_1329 rep; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KHP_0851 pcrA; ATP-dependent single-stranded DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KHP_0257 xseA; large subunit of the single-stranded DNA-specific dexodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D KHP_1333 xseB; small subunit of the single-stranded DNA-specific dexodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D KHP_0337 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D KHP_1141 ssb; DNA helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D KHP_1311 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KHP_0816 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KHP_0608 dnaX; gamma and tau subunits of the DNA polymerase III holoenzyme K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KHP_1143 holA; delta subunit of the DNA polymerase III holoenzyme K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KHP_1127 holB; delta prime subunit of the DNA polymerase III holoenzyme K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KHP_1400 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KHP_0705 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:hpd03440] D KHP_0337 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D KHP_1141 ssb; DNA helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D KHP_0863 recR; recombinational DNA repair protein K06187 recR; recombination protein RecR D KHP_0152 recA; recombinase K03553 recA; recombination protein RecA D KHP_0829 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D KHP_0376 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D KHP_0455 ruvC; Holliday junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D KHP_1375 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D KHP_1311 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KHP_0816 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KHP_0608 dnaX; gamma and tau subunits of the DNA polymerase III holoenzyme K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KHP_1143 holA; delta subunit of the DNA polymerase III holoenzyme K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KHP_1127 holB; delta prime subunit of the DNA polymerase III holoenzyme K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KHP_1400 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KHP_0969 priA; primosomal protein replication factor K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:hpd02010] D KHP_0437 modA; molybdate ABC transporter, periplasmic-binding protein K02020 modA; molybdate transport system substrate-binding protein D KHP_0439 modD; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D KHP_0510 proWX; betaine/proline/choline ABC transporter transmembrane component K05845 opuC; osmoprotectant transport system substrate-binding protein D KHP_0509 proV; osmoprotection ABC transporter/ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D KHP_1315 ABC transport system substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D KHP_1317 ABC transport system permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D KHP_1316 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D KHP_0878 yckK; amino acid ABC transporter, periplasmic binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D KHP_0877 yckJ; amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein D KHP_1433 plpA; outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D KHP_1446 acbD; ABC transporter system permease protein K02072 metI; D-methionine transport system permease protein D KHP_1445 abc; ABC transporter system ATP-binding domain protein K02071 metN; D-methionine transport system ATP-binding protein D KHP_0295 dppA; periplasmic dipeptide-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KHP_0296 dppB; dipeptide permease protein K12369 dppB; dipeptide transport system permease protein D KHP_0297 dppC; dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein D KHP_0298 dppD; dipeptide transporte system ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D KHP_0299 dppF; dipeptide transporte system ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D KHP_1148 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KHP_1147 oppB; oligopeptide ABC transporter, permease protein K13894 yejB; microcin C transport system permease protein D KHP_0250 oppC; integral membrane protein of the oligopeptide transport system K13895 yejE; microcin C transport system permease protein D KHP_0249 oppD; ATPase protein of the oligopeptide transport system K13896 yejF; microcin C transport system ATP-binding protein D KHP_0993 integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein D KHP_1349 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D KHP_0610 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D KHP_0577 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein D KHP_0578 ftsE; ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D KHP_0356 msbA; lipid A and glycerophospholipid transporter K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:hpd03070] D KHP_1412 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D KHP_1413 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D KHP_1099 secE; preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE D KHP_1151 secG; protein translocation protein K03075 secG; preprotein translocase subunit SecG D KHP_1193 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY D KHP_1411 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D KHP_1301 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D KHP_0541 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D KHP_0563 ftsY; signal recognition particule receptor K03110 ftsY; fused signal recognition particle receptor D KHP_1048 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D KHP_0313 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D KHP_0375 tatB; sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D KHP_0374 tatC; sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC D KHP_0833 vacA; VacA cytotoxin K11028 vacA; vacuolating cytotoxin D KHP_0794 virB11_1; ATPase protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D KHP_1272 virB11_2; type IV secretion system ATPase K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D KHP_0925 virB11_2; type IV secretion system ATPase K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D KHP_0924 virD4; VirD4 protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:hpd02020] D KHP_0416 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107] D KHP_1222 czcA; cation efflux system protein K07787 cusA; copper/silver efflux system protein D KHP_0117 flaB; flagellin B K02406 fliC; flagellin D KHP_0717 flaA; flagellin A K02406 fliC; flagellin D KHP_0403 fliA; transcription initiation factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA D KHP_0513 motA; flagellar motor rotation protein K02556 motA; chemotaxis protein MotA D KHP_1380 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D KHP_1293 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D KHP_0806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KHP_0243 atoS; signal-transducing protein, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D KHP_0629 atoE; short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KHP_0611 rpoN; transcription initiation factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D KHP_0687 hyaC; cytochrome b subunit of hydrogen uptake-like hydrogenase K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D KHP_0102 tlpA; methyl-accepting chemotaxis transmembrane sensory protein K03406 mcp; methyl-accepting chemotaxis protein D KHP_0106 tlpB; methyl-accepting chemotaxis transmembrane sensory protein K03406 mcp; methyl-accepting chemotaxis protein D KHP_0965 cheW; CheA-MCP coupling protein K03408 cheW; purine-binding chemotaxis protein CheW D KHP_0964 cheA; autophosphorylating histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KHP_0368 cheY; modulator of the flagellar rotation direction K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KHP_0963 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0017 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0704 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_1422 fbcF; ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D KHP_1423 fbcH; ubiquinol cytochrome c oxidoreductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D KHP_1424 petC; ubiquinol cytochrome c oxidoreductase, cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D KHP_1123 cytochrome c553 K08738 CYC; cytochrome c D KHP_0143 fixN; cytochrome c oxidase heme b and copper-binding subunit K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D KHP_0144 fixO; cytochrome c oxidase monoheme subunit K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D KHP_0145 ccoQ; cytochrome c oxidase subunit Q K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D KHP_0146 fixP; cytochrome c oxidase diheme subunit K00406 ccoP; cytochrome c oxidase cbb3-type subunit III C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:hpd04148] D KHP_1390 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1] D KHP_1422 fbcF; ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:hpd02024] D KHP_0108 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D KHP_1178 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D KHP_1177 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D KHP_0133 aroF; tyrosine-regulated 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D KHP_0526 ribA; GTP-cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D KHP_1357 ribD; riboflavin-specific deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D KHP_1301 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D KHP_1099 secE; preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE D KHP_1151 secG; protein translocation protein K03075 secG; preprotein translocase subunit SecG D KHP_1193 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY D KHP_1411 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D KHP_0541 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D KHP_0563 ftsY; signal recognition particule receptor K03110 ftsY; fused signal recognition particle receptor D KHP_1048 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:hpd02030] D KHP_0102 tlpA; methyl-accepting chemotaxis transmembrane sensory protein K03406 mcp; methyl-accepting chemotaxis protein D KHP_0106 tlpB; methyl-accepting chemotaxis transmembrane sensory protein K03406 mcp; methyl-accepting chemotaxis protein D KHP_0295 dppA; periplasmic dipeptide-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KHP_0964 cheA; autophosphorylating histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KHP_0965 cheW; CheA-MCP coupling protein K03408 cheW; purine-binding chemotaxis protein CheW D KHP_0368 cheY; modulator of the flagellar rotation direction K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KHP_0963 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0017 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0704 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0341 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D KHP_0404 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D KHP_0405 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D KHP_0734 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D KHP_0513 motA; flagellar motor rotation protein K02556 motA; chemotaxis protein MotA D KHP_0512 motB; flagellar motor rotation protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:hpd02040] D KHP_1427 fliE; flagellar basal-body protein K02408 fliE; flagellar hook-basal body complex protein FliE D KHP_0340 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF D KHP_0341 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D KHP_0342 fliH; flagellar export protein K02411 fliH; flagellar assembly protein FliH D KHP_1271 fliI; flagellar export protein ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KHP_0846 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D KHP_0519 fliL; flagellar biosynthesis protein K02415 fliL; flagellar protein FliL D KHP_0404 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D KHP_0405 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D KHP_0734 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D KHP_0639 fliP; flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP D KHP_1270 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ D KHP_0170 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR D KHP_0394 flbA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA D KHP_0557 flhB; flagellar biosynthesis and export protein K02401 flhB; flagellar biosynthesis protein FlhB D KHP_1328 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D KHP_1429 flgB; flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB D KHP_1428 flgC; flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC D KHP_0847 flgD; hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD D KHP_0462 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE D KHP_0848 flgE_2; flagellar hook protein K02390 flgE; flagellar hook protein FlgE D KHP_0346 flgG; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF D KHP_1453 flgG; flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG D KHP_0318 flgH; flagellar basal-body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D KHP_0245 flgI; flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D KHP_0244 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D KHP_1018 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1 D KHP_0292 flgL; flagellar-hook associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D KHP_0491 hypothetical protein K09860 flgP; outer membrane protein FlgP D KHP_0117 flaB; flagellin B K02406 fliC; flagellin D KHP_0717 flaA; flagellin A K02406 fliC; flagellin D KHP_0574 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D KHP_0573 fliS; flagellar protein K02422 fliS; flagellar secretion chaperone FliS D KHP_0513 motA; flagellar motor rotation protein K02556 motA; chemotaxis protein MotA D KHP_0512 motB; flagellar motor rotation protein K02557 motB; chemotaxis protein MotB D KHP_0878 yckK; amino acid ABC transporter, periplasmic binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D KHP_0092 rpoD; transcription initiation factor sigma-80 K03086 rpoD; RNA polymerase primary sigma factor D KHP_0611 rpoN; transcription initiation factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D KHP_0403 fliA; transcription initiation factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D KHP_0153 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:hpd01501] D KHP_0712 hefB; membrane fusion protein of the hefABC efflux system K03585 acrA; membrane fusion protein, multidrug efflux system D KHP_0721 pbp1A; penicillin-binding protein 1 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D KHP_1434 pbp2; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KHP_1426 ftsI; penicillin-binding protein 3 or FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:hpd01502] D KHP_0588 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KHP_0879 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D KHP_0586 murF; UDP-MurNac-pentapeptide synthetase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D KHP_0823 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D KHP_1051 murG; UDP-N-acetylglucosamine lipidI transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hpd01503] D KHP_0020 integral membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D KHP_0555 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KHP_0416 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107] D KHP_0712 hefB; membrane fusion protein of the hefABC efflux system K03585 acrA; membrane fusion protein, multidrug efflux system D KHP_0028 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:hpd01000] C 01001 Protein kinases [BR:hpd01001] D KHP_0038 signal-transducing protein, histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D KHP_0162 signal-transducing protein, histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D KHP_0243 atoS; signal-transducing protein, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D KHP_0964 cheA; autophosphorylating histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:hpd01009] D KHP_0209 htpG; chaperone and heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D KHP_0669 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:hpd01002] D KHP_0077 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D KHP_0686 hyaD; endoprotease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D KHP_0947 guaA; guanosine-5'-monophosphate synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D KHP_1383 glmS; glucosamine fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D KHP_0434 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D KHP_0664 ymxG; processing zinc-metalloprotease K07263 pqqL; zinc protease [EC:3.4.24.-] D KHP_0748 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D KHP_0212 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D KHP_1192 map; methionine amino peptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D KHP_0398 pepQ; proline peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D KHP_0366 ftsH; metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D KHP_0865 htpX; heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D KHP_0256 integral membrane protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D KHP_0416 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107] D KHP_0534 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D KHP_0024 lon; ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D KHP_0742 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D KHP_0051 prc; carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D KHP_1285 pspA; signal peptide protease IV K04773 sppA; protease IV [EC:3.4.21.-] D KHP_0803 hslV; heat shock protein, protease subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D KHP_1017 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D KHP_0166 prtC; collagenase K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:hpd01003] D KHP_0670 fucTa; alpha1,3-fucosyltransferase K20151 fucT; alpha(1,3/1,4) fucosyltransferase [EC:2.4.1.65 2.4.1.152] D KHP_0977 fucTb; alpha1,3-fucosyltransferase K20151 fucT; alpha(1,3/1,4) fucosyltransferase [EC:2.4.1.65 2.4.1.152] D KHP_0721 pbp1A; penicillin-binding protein 1 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:hpd01005] D KHP_0028 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D KHP_0465 lpxB; lipid A disaccharide synthetase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D KHP_0383 lpxC; UDP-3-0-acyl N-acetylglcosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D KHP_0195 lpxD; UDP-3-0-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D KHP_0019 hypothetical protein K12977 lpxE; lipid A 1-phosphatase [EC:3.1.3.-] D KHP_1448 hypothetical protein K23159 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D KHP_0962 hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D KHP_0268 hypothetical protein K09778 lpxJ; Kdo2-lipid IVA 3' secondary acyltransferase [EC:2.3.1.-] D KHP_0321 lpxK; tetraacyldisaccharide-1-P 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D KHP_0278 ibpB; lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D KHP_0628 outer membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D KHP_0895 kdtA; 3-deoxy-d-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D KHP_0020 integral membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D KHP_0739 hypothetical protein K23082 kdoH1; 3-deoxy-D-manno-octulosonic acid-hydrolase [EC:3.2.1.144] D KHP_0738 hypothetical protein K23083 kdoH2; 3-deoxy-D-manno-octulosonic acid-hydrolase D KHP_0003 kdsA; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D KHP_0229 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D KHP_1439 ABC transporter system inner membrane protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D KHP_1278 kpsF; polysialic acid capsule expression protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D KHP_0277 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D KHP_1087 rfaF; ADP-heptose-LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D KHP_1267 rfaJ; lipopolysaccharide 1,2-glycosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D KHP_0158 rfaJ1; LPS 1,2-glycosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D KHP_0396 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D KHP_0475 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D KHP_0472 hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D KHP_0474 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D KHP_0473 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpd01011] D KHP_0673 murA; UDP-N-acetylglucosamine enolpyruvyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D KHP_1269 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D KHP_0696 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D KHP_0822 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D KHP_1345 murE; UDP-MurNac-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D KHP_0588 ddlA; D-alanine:D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D KHP_0879 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D KHP_0770 glr; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D KHP_0823 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D KHP_1051 murG; UDP-N-acetylglucosamine lipidI transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D KHP_0479 integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D KHP_0831 mviN; virulence factor mviN protein K03980 murJ; putative peptidoglycan lipid II flippase D KHP_0721 pbp1A; penicillin-binding protein 1 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D KHP_1434 pbp2; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D KHP_1426 ftsI; penicillin-binding protein 3 or FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D KHP_0676 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D KHP_1441 dniR; regulatory protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D KHP_0730 pabC; aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D KHP_1440 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D KHP_0555 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:hpd01004] D KHP_0094 fabD; malonyl coenzyme A-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D KHP_0201 fabH; beta-ketoacyl-acyl carrier protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D KHP_0761 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D KHP_0757 fabG; 3-ketoacyl-acyl carrier protein reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D KHP_0027 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D KHP_0194 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D KHP_0390 acoE; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D KHP_0200 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D KHP_1361 integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D KHP_0053 plsC; 1-acyl-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:hpd01006] D KHP_0867 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D KHP_0239 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D KHP_1117 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D KHP_1266 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D KHP_0042 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:hpd01007] D KHP_0440 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KHP_0678 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D KHP_0553 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D KHP_1149 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D KHP_0832 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D KHP_0312 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D KHP_0942 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KHP_1273 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D KHP_1049 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D KHP_1415 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D KHP_0181 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D KHP_0703 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D KHP_1086 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D KHP_0898 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D KHP_0905 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D KHP_1331 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D KHP_0237 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D KHP_0123 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D KHP_1137 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D KHP_0953 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D KHP_0954 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D KHP_0651 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D KHP_0720 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D KHP_0909 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D KHP_0303 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D KHP_1319 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D KHP_0290 pabB; para-aminobenzoate (PABA)-synthetase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:hpd00194] D KHP_1029 atpC; ATP synthase F1 epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D KHP_1030 atpD; ATP synthase F1 beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D KHP_1031 atpG; ATP synthase F1 gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D KHP_1032 atpA; ATP synthase F1 alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D KHP_1034 atpF; ATP synthase F0 B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D KHP_1035 atpF'; ATP synthase F0 B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D KHP_1109 atpE; ATP synthase F0 C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D KHP_0499 atpB; ATP synthase F0, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:hpd03000] D KHP_1406 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_1020 bsp6IM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0447 hpy99XIM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0060 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0410 hspR; transcriptional activator of heat-shock proteins K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D KHP_0408 fur; fur regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D KHP_1038 birA; biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D KHP_1230 nikR; nickel uptake regulation protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D KHP_0065 putA; proline/delta 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D KHP_1036 plasmid replication-partition related protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D KHP_0113 hrcA; heat-inducible transcription repressor of Class I heat shock genes K03705 hrcA; heat-inducible transcriptional repressor D KHP_1182 tenA; transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 03021 Transcription machinery [BR:hpd03021] D KHP_1186 rpoA; alpha subunit of the DNA-dependent RNA polymerase core enzyme K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D KHP_1092 rpoB; DNA-dependent RNA polymerase beta-beta prime subunit K13797 rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6] D KHP_0551 rpoZ; RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D KHP_0092 rpoD; transcription initiation factor sigma-80 K03086 rpoD; RNA polymerase primary sigma factor D KHP_0611 rpoN; transcription initiation factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D KHP_0403 fliA; transcription initiation factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA D KHP_1366 nusA; transcription termination factor A K02600 nusA; transcription termination/antitermination protein NusA D KHP_0001 nusB; N utilization substance protein B/transcriptional antitermination factor K03625 nusB; transcription antitermination protein NusB D KHP_1098 nusG; transcription termination factor G K02601 nusG; transcription termination/antitermination protein NusG D KHP_0466 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA D KHP_0769 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:hpd03019] D KHP_0659 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D KHP_1279 ATP/GTP binding protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D KHP_0566 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D KHP_1144 rnr; 3'-5' exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D KHP_0246 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D KHP_0153 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KHP_1110 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D KHP_0769 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D KHP_0111 dnaK; chaperone and heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D KHP_0008 groEL; chaperone and heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KHP_0424 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D KHP_0680 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D KHP_1124 invA; diadenosine polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D KHP_1293 csrA; carbon storage regulator K03563 csrA; carbon storage regulator C 03041 Spliceosome C 03011 Ribosome [BR:hpd03011] D KHP_0957 rps1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D KHP_1408 rps2; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D KHP_1206 rps3; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D KHP_1187 rps4; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D KHP_1195 rps5; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D KHP_1142 rps6; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D KHP_1090 rps7; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D KHP_1198 rps8; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D KHP_0087 rps9; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D KHP_1213 rps10; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D KHP_1188 rps11; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D KHP_1091 rps12; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D KHP_1189 rps13; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D KHP_1199 rps14; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D KHP_0395 rps15; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D KHP_1047 rpS16; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D KHP_1203 rps17; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D KHP_1140 rps18; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D KHP_1208 rps19; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D KHP_0079 rps20; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D KHP_0756 rps21; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D KHP_1095 rpl1; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D KHP_1209 rpl2; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D KHP_1212 rpl3; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D KHP_1211 rpl4; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D KHP_1200 rpl5; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D KHP_1197 rpl6; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D KHP_0804 rpl9; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D KHP_1094 rpl10; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D KHP_1096 rpl11; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D KHP_1093 rpl12; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D KHP_0088 rpl13; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D KHP_1202 rpl14; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D KHP_1194 rpl15; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D KHP_1205 rpl16; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D KHP_1185 rpl17; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D KHP_1196 rpl18; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D KHP_1043 rpl19; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D KHP_0126 rpl20; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D KHP_0293 rpl21; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D KHP_1207 rpl22; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D KHP_1210 rpl23; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D KHP_1201 rpl24; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D KHP_0294 rpl27; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D KHP_0825 rpL28; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D KHP_1204 rpL29; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D KHP_0768 rpl31; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D KHP_0199 rpl32; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D KHP_1100 rpL33; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D KHP_1298 rpl34; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D KHP_0125 rpl35; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D KHP_1190 rpl36; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D KHP_1347 rpl25; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D KHP_rrnA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KHP_rrnB5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KHP_rrnA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KHP_rrnB16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KHP_rrnA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KHP_rrnB23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:hpd03009] D KHP_0659 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D KHP_0801 era; GTP-binding protein K03595 era; GTPase D KHP_0300 obg; GTP-binding protein of the GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-] D KHP_1366 nusA; transcription termination factor A K02600 nusA; transcription termination/antitermination protein NusA D KHP_0001 nusB; N utilization substance protein B/transcriptional antitermination factor K03625 nusB; transcription antitermination protein NusB D KHP_1098 nusG; transcription termination factor G K02601 nusG; transcription termination/antitermination protein NusG D KHP_1280 ksgA; 16S rRNA (adenosine-N6,N6-)-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D KHP_0982 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D KHP_0372 gidB; glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D KHP_0616 hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D KHP_0767 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D KHP_0352 tly; pore-forming cytolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D KHP_0766 nshR; 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D KHP_0887 secreted protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D KHP_1277 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D KHP_1310 rluB; pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D KHP_0894 rluC; pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D KHP_0581 rluD_2; pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D KHP_0336 rluD1; pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D KHP_1045 rimM; 16s rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM D KHP_0592 hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D KHP_0367 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D KHP_0327 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D KHP_0246 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D KHP_0493 engA; GTP-binding protein K03977 engA; GTPase D KHP_0552 spoT; ppGpp-3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D KHP_0388 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D KHP_0389 hypothetical protein K09748 rimP; ribosome maturation factor RimP D KHP_1265 hypothetical protein K09710 ybeB; ribosome-associated protein D KHP_1056 hypothetical protein K07042 ybeY; probable rRNA maturation factor D KHP_0749 gtp1; GTP-binding protein K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:hpd03016] D KHP_0440 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KHP_0237 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D KHP_1273 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D KHP_1415 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D KHP_0942 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D KHP_0312 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D KHP_0181 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D KHP_0703 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D KHP_1137 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D KHP_0123 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D KHP_1331 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D KHP_0832 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D KHP_1049 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D KHP_1086 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D KHP_0953 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D KHP_0954 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D KHP_0553 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D KHP_1149 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D KHP_0952 hinT; ADP hydrolase of the HIT protein family K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D KHP_0579 s-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D KHP_0994 hisT; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D KHP_0864 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D KHP_0220 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KHP_1266 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D KHP_1303 tdhF; thiophene/furan oxidation protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D KHP_0213 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D KHP_1299 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D KHP_0898 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D KHP_0905 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D KHP_0678 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D KHP_0600 transcriptional regulator K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D KHP_0267 ATP-binding protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D KHP_0968 hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D KHP_0940 s-adenosylmethionine-dependent methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D KHP_1044 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D KHP_0011 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D KHP_1227 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D KHP_1079 hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D KHP_0373 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D KHP_0681 exsB; ExsB trans-regulatory protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D KHP_0870 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D KHP_0871 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D KHP_1264 hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D KHP_0103 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D KHP_0279 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D KHP_0599 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D KHP_0384 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D KHP_1452 gcp; o-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D KHP_0609 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D KHP_0571 moeB/thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D KHP_1144 rnr; 3'-5' exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D KHP_1110 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:hpd03012] D KHP_0387 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D KHP_0124 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D KHP_1407 tfs; translation elongation factor Ts K02357 tsf; elongation factor Ts D KHP_1101 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D KHP_1089 fusA; translation elongation factor G K02355 fusA; elongation factor G D KHP_0080 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1 D KHP_1152 frr; ribosome releasing factor K02838 frr; ribosome recycling factor D KHP_0975 hemG; s-adenosylmethionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D KHP_1348 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D KHP_1191 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D KHP_0174 efp; translation elongation factor EF-P K02356 efp; elongation factor P D KHP_0168 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:hpd03110] D KHP_1248 clpA; ATP-dependent C1p protease K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D KHP_0262 clpB; ATP-dependent protease binding subunit/heat shock protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D KHP_0029 clpX; ATP-dependent C1p protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D KHP_0802 hslU; heat shock protein, ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D KHP_0209 htpG; chaperone and heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D KHP_0111 dnaK; chaperone and heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D KHP_0008 groEL; chaperone and heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KHP_1225 dnaJ; co-chaperone protein K03686 dnaJ; molecular chaperone DnaJ D KHP_0411 dnaJ_1; co-chaperone protein K05516 cbpA; curved DNA-binding protein D KHP_0112 grpE; co-chaperone and heat shock protein 24 K03687 GRPE; molecular chaperone GrpE D KHP_0009 groES; cochaperone K04078 groES; chaperonin GroES D KHP_0416 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107] D KHP_0366 ftsH; metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D KHP_0499 atpB; ATP synthase F0, subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D KHP_0463 hypA; HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D KHP_0843 hypB; HypB protein K04652 hypB; hydrogenase nickel incorporation protein HypB D KHP_1292 ppi; cyclophilin-type peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D KHP_0910 ppiD; pedidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D KHP_1022 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D KHP_0172 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D KHP_0504 trx1; thioredoxin K03671 TXN; thioredoxin D KHP_1309 trx2; thioredoxin K03671 TXN; thioredoxin D KHP_0230 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] C 04131 Membrane trafficking [BR:hpd04131] D KHP_0197 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D KHP_0859 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KHP_0055 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KHP_0209 htpG; chaperone and heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:hpd03051] D KHP_0209 htpG; chaperone and heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:hpd03032] D KHP_0660 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D KHP_1406 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_1020 bsp6IM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0447 hpy99XIM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0060 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0492 hup; histone-like DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D KHP_1380 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D KHP_0040 dnaB; DNA replicative helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D KHP_0010 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D KHP_1141 ssb; DNA helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D KHP_1311 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KHP_0816 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KHP_1143 holA; delta subunit of the DNA polymerase III holoenzyme K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KHP_1127 holB; delta prime subunit of the DNA polymerase III holoenzyme K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KHP_1400 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KHP_0608 dnaX; gamma and tau subunits of the DNA polymerase III holoenzyme K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KHP_1216 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D KHP_0705 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KHP_0621 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D KHP_0815 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D KHP_0118 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:hpd03036] D KHP_1406 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_1020 bsp6IM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0447 hpy99XIM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0060 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0659 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D KHP_0492 hup; histone-like DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D KHP_0411 dnaJ_1; co-chaperone protein K05516 cbpA; curved DNA-binding protein D KHP_1380 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D KHP_0242 napA; neutrophil activating protein K04047 dps; starvation-inducible DNA-binding protein D KHP_0911 ftsA; septum formation protein K03590 ftsA; cell division protein FtsA D KHP_0578 ftsE; ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D KHP_1426 ftsI; penicillin-binding protein 3 or FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D KHP_0348 ftsK; septum formation protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D KHP_1430 ftsW; cell division protein K03588 ftsW; cell division protein FtsW D KHP_0577 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein D KHP_0912 ftsZ; GTPase K03531 ftsZ; cell division protein FtsZ D KHP_0555 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D KHP_0712 hefB; membrane fusion protein of the hefABC efflux system K03585 acrA; membrane fusion protein, multidrug efflux system D KHP_0382 minC; septum site-directing protein K03610 minC; septum site-determining protein MinC D KHP_0324 minD; MinD cell division inhibitor protein K03609 minD; septum site-determining protein MinD D KHP_0325 minE; MinE protein K03608 minE; cell division topological specificity factor D KHP_0030 mreB; rod shape-determining actin-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D KHP_0031 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC D KHP_0583 mreB; rod shape-determining protein K05837 rodA; rod shape determining protein RodA D KHP_1037 soj; SpoOJ regulator K03496 parA; chromosome partitioning protein D KHP_0922 partitioning protein A K03496 parA; chromosome partitioning protein D KHP_1036 plasmid replication-partition related protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D KHP_0213 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D KHP_0372 gidB; glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D KHP_0649 xerC; integrase/recombinase K04763 xerD; integrase/recombinase XerD D KHP_0206 mpr; ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D KHP_1055 fic; cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D KHP_1436 engB; GTPase K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:hpd03400] D KHP_0648 dat1; methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D KHP_0054 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D KHP_0141 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D KHP_0733 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D KHP_0467 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D KHP_0671 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D KHP_1378 exoA; exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D KHP_0337 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D KHP_0705 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D KHP_0618 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D KHP_1015 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D KHP_0507 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D KHP_1329 rep; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KHP_0851 pcrA; ATP-dependent single-stranded DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D KHP_1092 rpoB; DNA-dependent RNA polymerase beta-beta prime subunit K13797 rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6] D KHP_1186 rpoA; alpha subunit of the DNA-dependent RNA polymerase core enzyme K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D KHP_0551 rpoZ; RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D KHP_1421 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D KHP_0698 mutS; DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D KHP_0257 xseA; large subunit of the single-stranded DNA-specific dexodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D KHP_1333 xseB; small subunit of the single-stranded DNA-specific dexodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D KHP_1311 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D KHP_0816 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D KHP_1143 holA; delta subunit of the DNA polymerase III holoenzyme K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D KHP_1127 holB; delta prime subunit of the DNA polymerase III holoenzyme K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D KHP_1400 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D KHP_0608 dnaX; gamma and tau subunits of the DNA polymerase III holoenzyme K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D KHP_1141 ssb; DNA helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D KHP_0152 recA; recombinase K03553 recA; recombination protein RecA D KHP_0829 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA D KHP_0376 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D KHP_0455 ruvC; Holliday junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D KHP_0969 priA; primosomal protein replication factor K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D KHP_0223 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms D KHP_1375 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D KHP_0863 recR; recombinational DNA repair protein K06187 recR; recombination protein RecR D KHP_1396 recN; DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N) D KHP_0621 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D KHP_0815 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D KHP_0118 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D KHP_0492 hup; histone-like DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D KHP_0645 nrdA; ribonucleoside-diphosphate reductase 1 alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D KHP_0991 nrdB; ribonucleoside-diphosphate reductase 1 beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:hpd03029] D KHP_1423 fbcH; ubiquinol cytochrome c oxidoreductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D KHP_0387 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D KHP_0124 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D KHP_1407 tfs; translation elongation factor Ts K02357 tsf; elongation factor Ts D KHP_1101 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D KHP_1089 fusA; translation elongation factor G K02355 fusA; elongation factor G D KHP_0801 era; GTP-binding protein K03595 era; GTPase D KHP_0553 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D KHP_1415 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D KHP_0703 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D KHP_0312 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D KHP_0497 gatA; Glu-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D KHP_0663 gatB; Glu-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D KHP_0908 gatC; Glu-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D KHP_1141 ssb; DNA helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein D KHP_0666 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D KHP_0111 dnaK; chaperone and heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D KHP_0112 grpE; co-chaperone and heat shock protein 24 K03687 GRPE; molecular chaperone GrpE D KHP_0008 groEL; chaperone and heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KHP_0009 groES; cochaperone K04078 groES; chaperonin GroES D KHP_1225 dnaJ; co-chaperone protein K03686 dnaJ; molecular chaperone DnaJ D KHP_0220 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D KHP_0206 mpr; ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D KHP_1301 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D KHP_0209 htpG; chaperone and heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:hpd02000] D KHP_0356 msbA; lipid A and glycerophospholipid transporter K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D KHP_1102 hetA; ABC-transporter, ATP-binding domain protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D KHP_0437 modA; molybdate ABC transporter, periplasmic-binding protein K02020 modA; molybdate transport system substrate-binding protein D KHP_0439 modD; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D KHP_0510 proWX; betaine/proline/choline ABC transporter transmembrane component K05845 opuC; osmoprotectant transport system substrate-binding protein D KHP_0509 proV; osmoprotection ABC transporter/ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D KHP_1315 ABC transport system substrate binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D KHP_1317 ABC transport system permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D KHP_1316 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D KHP_1314 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D KHP_0878 yckK; amino acid ABC transporter, periplasmic binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D KHP_0877 yckJ; amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein D KHP_1433 plpA; outer membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein D KHP_1446 acbD; ABC transporter system permease protein K02072 metI; D-methionine transport system permease protein D KHP_1445 abc; ABC transporter system ATP-binding domain protein K02071 metN; D-methionine transport system ATP-binding protein D KHP_1068 glnH; glutamine ABC transporter, periplasmic glutamine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D KHP_1065 glnP; glutamine ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D KHP_1066 glnP; glutamine ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein D KHP_1067 glnQ; glutamine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D KHP_0295 dppA; periplasmic dipeptide-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D KHP_0296 dppB; dipeptide permease protein K12369 dppB; dipeptide transport system permease protein D KHP_0297 dppC; dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein D KHP_0298 dppD; dipeptide transporte system ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D KHP_0299 dppF; dipeptide transporte system ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D KHP_1148 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein D KHP_1147 oppB; oligopeptide ABC transporter, permease protein K13894 yejB; microcin C transport system permease protein D KHP_0250 oppC; integral membrane protein of the oligopeptide transport system K13895 yejE; microcin C transport system permease protein D KHP_0249 oppD; ATPase protein of the oligopeptide transport system K13896 yejF; microcin C transport system ATP-binding protein D KHP_1431 ceuE; iron(III) ABC transporter, periplasmic iron-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D KHP_0835 fecD; iron(III) dicitrate ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D KHP_0834 fecE; iron(III) dicitrate ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D KHP_0993 integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein D KHP_1349 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D KHP_0610 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D KHP_0577 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein D KHP_0578 ftsE; ABC transporter, ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D KHP_1337 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D KHP_0708 ABC transporter, permease K01992 ABC-2.P; ABC-2 type transport system permease protein D KHP_1338 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D KHP_1116 yhcG; ABC transporter/ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D KHP_0540 lolC; transmembrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D KHP_0178 ABC transporter/ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D KHP_0214 sodium-dependent transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D KHP_0567 dinF; DNA-damage induced multidrug efflux protein K26939 norM; MATE family, multidrug efflux pump D KHP_1081 integral membrane protein K26937 dinF; MATE family, multidrug efflux pump D KHP_1070 gluP; glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D KHP_0347 kgtP; alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D KHP_0874 proP; proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D KHP_1082 sotB; sugar efflux transporter protein K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D KHP_0826 potassium channel protein K10716 kch; voltage-gated potassium channel D KHP_0858 integral membrane protein K19416 yccA; modulator of FtsH protease D KHP_0913 integral membrane protein K03442 mscS; small conductance mechanosensitive channel D KHP_0944 integral membrane protein K16052 ynaI; MscS family membrane protein D KHP_0074 ureI; pH-dependent urea-transporter K03191 ureI; acid-activated urea channel D KHP_0513 motA; flagellar motor rotation protein K02556 motA; chemotaxis protein MotA D KHP_0512 motB; flagellar motor rotation protein K02557 motB; chemotaxis protein MotB D KHP_1296 exbB; biopolymer transport accessory protein K03561 exbB; biopolymer transport protein ExbB D KHP_1231 exb_2; biopolymer transport accessory protein K03561 exbB; biopolymer transport protein ExbB D KHP_1028 exbB; biopolymer transport accessory protein K03561 exbB; biopolymer transport protein ExbB D KHP_1027 exbD; biopolymer transport accessory protein K03559 exbD; biopolymer transport protein ExbD D KHP_1232 exbD; biopolymer transport and binding protein K03559 exbD; biopolymer transport protein ExbD D KHP_1297 exbB3; biopolymer transport accessory protein K03559 exbD; biopolymer transport protein ExbD D KHP_0057 corA; magnesium and cobalt transport protein K03284 corA; magnesium transporter D KHP_1121 crcB; CrcB integral membrane protein K06199 crcB; fluoride exporter D KHP_1341 tlyC; integral membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D KHP_0833 vacA; VacA cytotoxin K11028 vacA; vacuolating cytotoxin D KHP_1389 fecA; Iron(III) dicitrate transport protein K16091 fecA; Fe(3+) dicitrate transport protein D KHP_0521 fecA; iron(III) dicitrate transport protein K16091 fecA; Fe(3+) dicitrate transport protein D KHP_0638 fecA; iron(III) dicitrate transport protein K16091 fecA; Fe(3+) dicitrate transport protein D KHP_1364 frpB; iron-regulated outer membrane protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KHP_0456 frpB; iron-regulated outer membrane protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KHP_0855 frpB_2; iron-regulated outer membrane protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D KHP_0666 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D KHP_0025 comL; competence lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D KHP_1437 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D KHP_1112 imp; organic solvent tolerance protein K04744 lptD; LPS-assembly protein D KHP_0417 rocE; arginine permease K16235 mmuP; S-methylmethionine transporter D KHP_0902 czcA; cation efflux system protein K15726 czcA; heavy metal efflux system protein D KHP_1222 czcA; cation efflux system protein K07787 cusA; copper/silver efflux system protein D KHP_0568 integral membrane protein K07084 yuiF; putative amino acid transporter D KHP_0603 dcuA; anaerobic C4-dicarboxylate transport protein K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D KHP_0139 lctP; l-lactate permease K03303 lutP; lactate permease D KHP_0140 lctP; l-lactate permease K03303 lutP; lactate permease D KHP_0064 putP; sodium/proline symporter K11928 putP; sodium/proline symporter D KHP_1358 gltS; sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family D KHP_1410 nhaA; Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D KHP_0435 kefB; glutathione-regulated potassium-efflux system protein K03455 KEA1_2_3; K+:H+ antiporter D KHP_1071 integral membrane protein K06901 pbuG; adenine/guanine/hypoxanthine permease D KHP_0132 sdaC; l-serine transporter K03837 sdaC; serine transporter D KHP_0142 c(4)-dicarboxylates and tricarboxylates/succinate antiporter K11106 ttdT; L-tartrate/succinate antiporter D KHP_0359 nixA; high-affinity nickel transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D KHP_0227 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D KHP_0831 mviN; virulence factor mviN protein K03980 murJ; putative peptidoglycan lipid II flippase D KHP_0607 integral membrane protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D KHP_1224 azlC; branched-chain amino acid transport protein K26605 azlC; branched chain amino acid efflux pump D KHP_1223 azlD; branched-chain amino acid transport protein K26606 azlD; branched chain amino acid efflux pump D KHP_1430 ftsW; cell division protein K03588 ftsW; cell division protein FtsW D KHP_1233 tonB; siderophore-mediated iron transport protein K03832 tonB; periplasmic protein TonB D KHP_1026 hypothetical protein K03832 tonB; periplasmic protein TonB D KHP_1024 palA; peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein D KHP_1025 tolB; TonB-independent protein-uptake protein K03641 tolB; TolB protein D KHP_0263 ccdA; cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D KHP_0949 bisC; S/N-oxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D KHP_0712 hefB; membrane fusion protein of the hefABC efflux system K03585 acrA; membrane fusion protein, multidrug efflux system D KHP_1183 pnuC; nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D KHP_0637 feoB; iron(II) (ferous iron) transport protein K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:hpd02044] D KHP_0677 integral membrane protein K02221 yggT; YggT family protein D KHP_0041 comE3; DNA competence protein K02238 comEC; competence protein ComEC D KHP_1324 hypothetical protein K02242 comFC; competence protein ComFC D KHP_0394 flbA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA D KHP_0557 flhB; flagellar biosynthesis and export protein K02401 flhB; flagellar biosynthesis protein FlhB D KHP_1444 flhB_2; FlhB-related flagellar biosynthesis protein K04061 flhB2; flagellar biosynthesis protein D KHP_0340 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF D KHP_0342 fliH; flagellar export protein K02411 fliH; flagellar assembly protein FliH D KHP_1271 fliI; flagellar export protein ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KHP_0405 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D KHP_0734 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D KHP_0639 fliP; flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP D KHP_1270 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ D KHP_0170 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR D KHP_0794 virB11_1; ATPase protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D KHP_1272 virB11_2; type IV secretion system ATPase K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D KHP_0925 virB11_2; type IV secretion system ATPase K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D KHP_0924 virD4; VirD4 protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D KHP_1240 comB10; ComB10 competence protein K12048 comB10; ComB10 competence protein D KHP_0926 virB10; VirB10 protein K12048 comB10; ComB10 competence protein D KHP_1241 comB2; ComB9 competence protein K12049 comB9; ComB9 competence protein D KHP_0927 comB2; ComB9 competence protein K12049 comB9; ComB9 competence protein D KHP_1242 comB1; ComB8 competence protein K12050 comB8; ComB8 competence protein D KHP_0928 hypothetical protein K12050 comB8; ComB8 competence protein D KHP_1243 hypothetical protein K12051 comB7; ComB7 competence protein D KHP_1244 hypothetical protein K12052 comB6; ComB6 competence protein D KHP_0015 comB4; ComB4 competence protein K12053 comB4; ComB4 competence protein D KHP_0929 virB4; ATPase K12053 comB4; ComB4 competence protein D KHP_0230 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D KHP_0798 cag1; cag pathogenicity island protein 1 K12086 cag1; cag pathogenicity island protein 1 D KHP_0797 cag3; cag pathogenicity island protein 3 K12088 cag3; cag pathogenicity island protein 3 D KHP_0796 cag4; cag pathogenicity island protein 4 K12089 cag4; cag pathogenicity island protein 4 D KHP_0795 cag5; cag pathogenicity island protein 5 K12090 cag5; cag pathogenicity island protein 5 D KHP_0793 cag6; cag pathogenicity island protein Z K12091 cag6; cag pathogenicity island protein 6 D KHP_0792 cag7; cag pathogenicity island protein Y K12092 cag7; cag pathogenicity island protein 7 D KHP_0791 cag8; cag pathogenicity island protein X K12093 cag8; cag pathogenicity island protein 8 D KHP_0790 cagW; cag pathogenicity island protein W K12094 cag9; cag pathogenicity island protein 9 D KHP_0789 cag10; cag pathogenicity island protein V K12095 cag10; cag pathogenicity island protein 10 D KHP_0788 cagU; cag pathogenicity island protein U K12096 cag11; cag pathogenicity island protein 11 D KHP_0787 cag12; cag pathogenicity island protein T K12097 cag12; cag pathogenicity island protein 12 D KHP_0786 cagS; cag pathogenicity island protein S K12098 cag13; cag pathogenicity island protein 13 D KHP_0785 cagQ; cag pathogenicity island protein Q K12099 cag14; cag pathogenicity island protein 14 D KHP_0784 cagP; cag pathogenicity island protein P K12100 cag15; cag pathogenicity island protein 15 D KHP_0782 cag16; cag pathogenicity island protein M K12101 cag16; cag pathogenicity island protein 16 D KHP_0781 cag17; cag pathogenicity island protein N K12102 cag17; cag pathogenicity island protein 17 D KHP_0780 cag18; cag pathogenicity island protein L K12103 cag18; cag pathogenicity island protein 18 D KHP_0779 cag19; cag pathogenicity island protein I K12104 cag19; cag pathogenicity island protein 19 D KHP_0778 cag20; cag pathogenicity island protein H K12105 cag20; cag pathogenicity island protein 20 D KHP_0777 cag21; cag pathogenicity island protein G K12106 cag21; cag pathogenicity island protein 21 D KHP_0776 cagF; cag pathogenicity island protein F K12107 cag22; cag pathogenicity island protein 22 D KHP_0775 cag23; cag pathogenicity island protein E K12108 cag23; cag pathogenicity island protein 23 [EC:7.4.2.8] D KHP_0774 cagD; cag pathogenicity island protein D K12109 cag24; cag pathogenicity island protein 24 D KHP_0773 cagC; cag pathogenicity island protein C K12110 cag25; cag pathogenicity island protein 25 D KHP_0833 vacA; VacA cytotoxin K11028 vacA; vacuolating cytotoxin D KHP_0541 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D KHP_1412 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD D KHP_1099 secE; preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE D KHP_1413 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF D KHP_1151 secG; protein translocation protein K03075 secG; preprotein translocase subunit SecG D KHP_1193 secY; preprotein translocase subunit K03076 secY; preprotein translocase subunit SecY D KHP_1048 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D KHP_0563 ftsY; signal recognition particule receptor K03110 ftsY; fused signal recognition particle receptor D KHP_1411 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D KHP_1301 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D KHP_0313 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA D KHP_0375 tatB; sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB D KHP_0374 tatC; sec-independent protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:hpd02042] D KHP_0833 vacA; VacA cytotoxin K11028 vacA; vacuolating cytotoxin D KHP_1341 tlyC; integral membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:hpd02022] D KHP_0038 signal-transducing protein, histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D KHP_0162 signal-transducing protein, histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D KHP_0163 ompR; response regulator K02483 K02483; two-component system, OmpR family, response regulator D KHP_0037 response regulator K02483 K02483; two-component system, OmpR family, response regulator D KHP_0392 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D KHP_0243 atoS; signal-transducing protein, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D KHP_0619 flgR; transcriptional activator of flagella proteins K02481 flgR; two-component system, NtrC family, response regulator D KHP_0964 cheA; autophosphorylating histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KHP_0368 cheY; modulator of the flagellar rotation direction K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KHP_0963 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0017 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0704 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV C 02035 Bacterial motility proteins [BR:hpd02035] D KHP_0964 cheA; autophosphorylating histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D KHP_0965 cheW; CheA-MCP coupling protein K03408 cheW; purine-binding chemotaxis protein CheW D KHP_0368 cheY; modulator of the flagellar rotation direction K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D KHP_0963 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0017 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0704 cheV; CheA-MCP interaction modulator K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D KHP_0102 tlpA; methyl-accepting chemotaxis transmembrane sensory protein K03406 mcp; methyl-accepting chemotaxis protein D KHP_0106 tlpB; methyl-accepting chemotaxis transmembrane sensory protein K03406 mcp; methyl-accepting chemotaxis protein D KHP_0342 fliH; flagellar export protein K02411 fliH; flagellar assembly protein FliH D KHP_1271 fliI; flagellar export protein ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D KHP_0639 fliP; flagellar biosynthetic protein K02419 fliP; flagellar biosynthesis protein FliP D KHP_1270 fliQ; flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ D KHP_0170 fliR; flagellar biosynthetic protein K02421 fliR; flagellar biosynthesis protein FliR D KHP_0394 flbA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA D KHP_0557 flhB; flagellar biosynthesis and export protein K02401 flhB; flagellar biosynthesis protein FlhB D KHP_0341 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG D KHP_0404 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM D KHP_0405 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D KHP_0734 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D KHP_0340 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF D KHP_0245 flgI; flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D KHP_1328 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D KHP_0318 flgH; flagellar basal-body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D KHP_0519 fliL; flagellar biosynthesis protein K02415 fliL; flagellar protein FliL D KHP_1427 fliE; flagellar basal-body protein K02408 fliE; flagellar hook-basal body complex protein FliE D KHP_0846 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D KHP_1429 flgB; flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB D KHP_1428 flgC; flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC D KHP_0847 flgD; hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD D KHP_0346 flgG; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF D KHP_1453 flgG; flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG D KHP_0244 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D KHP_0462 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE D KHP_0848 flgE_2; flagellar hook protein K02390 flgE; flagellar hook protein FlgE D KHP_1018 flgK; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1 D KHP_0292 flgL; flagellar-hook associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D KHP_0491 hypothetical protein K09860 flgP; outer membrane protein FlgP D KHP_0117 flaB; flagellin B K02406 fliC; flagellin D KHP_0717 flaA; flagellin A K02406 fliC; flagellin D KHP_0574 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D KHP_0573 fliS; flagellar protein K02422 fliS; flagellar secretion chaperone FliS D KHP_0403 fliA; transcription initiation factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA D KHP_0513 motA; flagellar motor rotation protein K02556 motA; chemotaxis protein MotA D KHP_0512 motB; flagellar motor rotation protein K02557 motB; chemotaxis protein MotB D KHP_0878 yckK; amino acid ABC transporter, periplasmic binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D KHP_0026 hypothetical protein K13626 fliW; flagellar assembly factor FliW D KHP_0575 flaG; polar flagellin K06603 flaG; flagellar protein FlaG D KHP_0400 flhF; flagellar biosynthesis protein K02404 flhF; flagellar biosynthesis protein FlhF D KHP_0401 ylxH; ATP-binding protein K04562 flhG; flagellar biosynthesis protein FlhG C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:hpd04812] D KHP_0030 mreB; rod shape-determining actin-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D KHP_0912 ftsZ; GTPase K03531 ftsZ; cell division protein FtsZ D KHP_0911 ftsA; septum formation protein K03590 ftsA; cell division protein FtsA D KHP_0382 minC; septum site-directing protein K03610 minC; septum site-determining protein MinC D KHP_0324 minD; MinD cell division inhibitor protein K03609 minD; septum site-determining protein MinD D KHP_0325 minE; MinE protein K03608 minE; cell division topological specificity factor D KHP_1037 soj; SpoOJ regulator K03496 parA; chromosome partitioning protein D KHP_0922 partitioning protein A K03496 parA; chromosome partitioning protein D KHP_1036 plasmid replication-partition related protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:hpd04147] D KHP_0209 htpG; chaperone and heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D KHP_0153 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D KHP_0859 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KHP_0055 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D KHP_0056 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D KHP_1432 tsaA; alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D KHP_0008 groEL; chaperone and heat shock protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D KHP_0111 dnaK; chaperone and heat shock protein 70 K04043 dnaK; molecular chaperone DnaK D KHP_1062 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D KHP_0498 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D KHP_1101 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu D KHP_0952 hinT; ADP hydrolase of the HIT protein family K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D KHP_0632 fadA; acetyl coenzyme A acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D KHP_0702 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D KHP_0746 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D KHP_1402 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D KHP_0806 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D KHP_0161 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D KHP_0959 serA; 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D KHP_1001 g6pD; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D KHP_0193 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:hpd02048] D KHP_1387 hsdR; type I R-M system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D KHP_0482 hsdR; type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D KHP_0426 hsdS; type I restriction enzyme S protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D KHP_1385 hsdS_3a; type I R-M system specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D KHP_0481 hsdS_5; specificity subunit S of type I restriction-modification system K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D KHP_0538 hsdS_5; specificity subunit S of type I restriction-modification system K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D KHP_0427 hsdM_1; type I restriction enzyme M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D KHP_0480 hsdM; type I restriction enzyme modification protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D KHP_1386 hsdM; type I R-M system modification subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D KHP_0260 type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D KHP_0850 hinDIIM; type II adenosine specific DNA methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D KHP_1368 eco57IR; type IIS restriction-modification protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D KHP_1104 hpy99XM; type II m6A methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D KHP_0035 hpyAIIM1; type IIS m6A methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D KHP_0059 hpy99VM; adenine-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D KHP_0096 hpy99VIM; adenine-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D KHP_0261 hpaim; cytosine methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D KHP_0049 hinFIM; type II m6A methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D KHP_1406 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_1020 bsp6IM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0447 hpy99XIM; type II m5C methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0060 ddeM; cytosine-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D KHP_0034 hpyAIIM2; type IIS m4C methylase K24451 zim; modification methylase D KHP_1373 res; type III R-M system restriction enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5] D KHP_1257 res_1; type III restriction enzyme R protein K01156 res; type III restriction enzyme [EC:3.1.21.5] D KHP_0258 hpyORF260M; m6A methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D KHP_1256 mod_1; type III restriction enzyme M protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D KHP_1374 mod_2; type III R-M system modification enzyme K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D KHP_0062 hpy99IIM; adenine methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D KHP_0358 integral membrane protein K07448 mrr; restriction system protein D KHP_0916 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D KHP_0912 ftsZ; GTPase K03531 ftsZ; cell division protein FtsZ D KHP_0030 mreB; rod shape-determining actin-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D KHP_0440 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D KHP_0220 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:hpd04090] C 01504 Antimicrobial resistance genes [BR:hpd01504] D KHP_0712 hefB; membrane fusion protein of the hefABC efflux system K03585 acrA; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:hpd03100] D KHP_tRNAAla1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KHP_tRNAAla2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D KHP_tRNAArg1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KHP_tRNAArg4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KHP_tRNAArg3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KHP_tRNAArg2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D KHP_tRNAAsn1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D KHP_tRNAAsp1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D KHP_tRNACys1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D KHP_tRNAGln1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D KHP_tRNAGlu2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KHP_tRNAGlu1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D KHP_tRNAGly1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KHP_tRNAGly2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D KHP_tRNAHis1 tRNA-His K14226 tRNA-His; tRNA His D KHP_tRNAIle1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D KHP_tRNALeu3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KHP_tRNALeu1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KHP_tRNALeu4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KHP_tRNALeu2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D KHP_tRNALys1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D KHP_tRNAMet2 tRNA-Met K14230 tRNA-Met; tRNA Met D KHP_tRNAMet3 tRNA-Met K14230 tRNA-Met; tRNA Met D KHP_tRNAMet1 tRNA-Met K14230 tRNA-Met; tRNA Met D KHP_tRNAPhe1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D KHP_tRNAPro1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KHP_tRNAPro2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D KHP_tRNASer2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KHP_tRNASer1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KHP_tRNASer3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D KHP_tRNAThr1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D KHP_tRNAThr2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D KHP_tRNATrp1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D KHP_tRNATyr1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D KHP_tRNAVal1 tRNA-Val K14237 tRNA-Val; tRNA Val D KHP_tRNAVal2 tRNA-Val K14237 tRNA-Val; tRNA Val D KHP_rrnA16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KHP_rrnB16S 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D KHP_rrnA23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KHP_rrnB23S 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D KHP_rrnA5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D KHP_rrnB5S 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D KHP_1359 hypothetical protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D KHP_0690 mda66; modulator of drug activity K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D KHP_0224 msrA; peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D KHP_1312 cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D KHP_0135 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D KHP_0966 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D KHP_0688 hydB; large subunit of hydrogen uptake-like hydrogenase K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1] D KHP_0689 hyaA; small subunit of hydrogen uptake-like hydrogenase K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1] D KHP_0668 pfr; nonheme iron-containing ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D KHP_0992 pcm; l-isoaspartyl-protein carboxyl methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D KHP_0943 cfa; cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D KHP_0179 cute; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D KHP_0893 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D KHP_0820 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D KHP_1442 tatD; DNAse of the TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D KHP_0331 hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D KHP_0535 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D KHP_0307 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D KHP_0882 yabJ; regulator of purine biosynthesis K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D KHP_0039 integral membrane protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D KHP_0626 n-methylhydantoinase K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6] D KHP_0627 hyuA; n-methylhydantoinase K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6] D KHP_0625 hypothetical protein K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6] D KHP_0537 cadA; cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D KHP_0138 secreted protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D KHP_0137 iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D KHP_0136 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D KHP_0221 nifU; NifU scaffold protein K13819 K13819; NifU-like protein D KHP_1057 fldA; flavodoxin K03839 fldA; flavodoxin I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D KHP_0961 hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D KHP_0501 galT; beta-4-galactosyltransferase K07270 K07270; glycosyl transferase, family 25 D KHP_0523 LPS biosynthesis protein K07270 K07270; glycosyl transferase, family 25 D KHP_0701 LPS biosynthesis protein K07270 K07270; glycosyl transferase, family 25 D KHP_0700 LPS biosynthesis protein K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D KHP_1249 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D KHP_0533 tig; trigger factor K03545 tig; trigger factor D KHP_0073 ureE; nickel-ion metallochaperone protein K03187 ureE; urease accessory protein D KHP_0072 ureF; modulator of the UreD-apourease complex activation K03188 ureF; urease accessory protein D KHP_0071 ureG; GTP-binding protein K03189 ureG; urease accessory protein D KHP_0070 ureH; chaperone protein K03190 ureD; urease accessory protein D KHP_1295 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D KHP_0842 hypC; chaperone-like protein K04653 hypC; hydrogenase expression/formation protein HypC D KHP_0841 hypD; HypD protein K04654 hypD; hydrogenase expression/formation protein HypD D KHP_1236 hypE; hydrogenase expression/formation protein K04655 hypE; hydrogenase expression/formation protein HypE D KHP_1235 hypF; transcriptional regulator of hydrogenase activity K04656 hypF; hydrogenase maturation protein HypF D KHP_0536 comM; putative DNA transformation competence protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D KHP_1371 IS607 transposase orfA K07450 K07450; putative resolvase D KHP_0716 magIII; novel 3-methyladenine DNA glycosylase K07457 K07457; endonuclease III related protein D KHP_0505 hypothetical protein K07460 yraN; putative endonuclease D KHP_0326 dprA; DNA processing chain A K04096 smf; DNA processing protein D KHP_0409 hypothetical protein K07478 ycaJ; putative ATPase D KHP_0636 hypothetical protein K07501 K07501; 3'-5' exonuclease D KHP_1372 IS607 transposase orfB K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D KHP_1246 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D KHP_0711 acrB; cytoplasmic pump protein of the hefABC efflux system K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D KHP_1342 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D KHP_0818 sodium- and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D KHP_0819 sodium- and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D KHP_0880 dagA; sodium/D-alanine glycine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D KHP_1077 nupC; sodium/nucleoside cotransporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D KHP_1302 hypothetical protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility D KHP_1308 hypothetical protein K07337 K07337; penicillin-binding protein activator C 99995 Signaling proteins D KHP_1064 cstA; carbon starvation protein K06200 cstA; carbon starvation protein D KHP_0444 tipA; GTP-binding protein of the TypA subfamily K06207 typA; GTP-binding protein C 99992 Structural proteins D KHP_0542 lolA; carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D KHP_1339 secreted protein K01993 ABC-2.TX; HlyD family secretion protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D KHP_0180 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D KHP_1259 rhn; ribonuclease N K07058 K07058; membrane protein D KHP_1111 hypothetical protein K07100 K07100; putative phosphoribosyl transferase D KHP_0460 phnA; alkylphosphonate uptake protein K06193 phnA; protein PhnA D KHP_0753 hypothetical protein K21741 rclC; reactive chlorine resistance protein C C 99997 Function unknown D KHP_0580 hypothetical protein K06882 K06882; uncharacterized protein D KHP_0272 hypothetical protein K06940 K06940; uncharacterized protein D KHP_0562 ancestral polypeptide K06940 K06940; uncharacterized protein D KHP_0582 hypothetical protein K06946 K06946; uncharacterized protein D KHP_1046 hypothetical protein K06960 K06960; uncharacterized protein D KHP_0225 integral membrane protein K07090 K07090; uncharacterized protein D KHP_0647 integral membrane protein K07090 K07090; uncharacterized protein D KHP_0393 hypothetical protein K07097 K07097; uncharacterized protein D KHP_0391 integral membrane protein K07098 K07098; uncharacterized protein D KHP_0998 hcpC; cysteine-rich protein C K07126 K07126; uncharacterized protein D KHP_0210 hcpA; cysteine-rich protein A K07126 K07126; uncharacterized protein D KHP_0234 hcpE; cysteine-rich protein E K07126 K07126; uncharacterized protein D KHP_0692 hcpF; cysteine-rich protein F K07126 K07126; uncharacterized protein D KHP_1016 hcpX; cysteine-rich protein X K07126 K07126; uncharacterized protein D KHP_0159 hcpD; cystein-rich protein D K07126 K07126; uncharacterized protein D KHP_0328 hcpH; cysteine-rich protein H K07126 K07126; uncharacterized protein D KHP_0799 hypothetical protein K07126 K07126; uncharacterized protein D KHP_1214 hypothetical protein K07133 K07133; uncharacterized protein D KHP_0896 hypothetical protein K07164 K07164; uncharacterized protein D KHP_1300 hypothetical protein K08998 K08998; uncharacterized protein D KHP_0471 hypothetical protein K09792 K09792; uncharacterized protein D KHP_1138 hypothetical protein K09794 K09794; uncharacterized protein D KHP_1132 hypothetical protein K09804 K09804; uncharacterized protein D KHP_0478 hypothetical protein K09805 K09805; uncharacterized protein D KHP_0016 hypothetical protein K09859 K09859; uncharacterized protein D KHP_1354 hypothetical protein K09943 K09943; uncharacterized protein D KHP_0280 hypothetical protein K09944 K09944; uncharacterized protein D KHP_0289 hypothetical protein K01163 K01163; uncharacterized protein D KHP_0386 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024