+D GENES KO #

  KEGG Orthology (KO) - Vreelandella piezotolerans

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:hpiz00010] D GYM47_06985 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GYM47_06815 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_11100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_09245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D GYM47_00275 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GYM47_01735 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D GYM47_06850 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GYM47_07430 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GYM47_00280 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D GYM47_16725 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D GYM47_00185 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GYM47_03635 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GYM47_13810 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GYM47_06845 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GYM47_07870 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GYM47_14150 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D GYM47_14145 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_13230 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D GYM47_17555 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GYM47_12480 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_13720 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D GYM47_14110 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_06475 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_09825 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D GYM47_11335 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GYM47_02585 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GYM47_05210 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D GYM47_11605 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:hpiz00020] D GYM47_05095 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D GYM47_14850 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D GYM47_16455 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D GYM47_07890 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D GYM47_05320 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D GYM47_13470 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D GYM47_05120 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D GYM47_05125 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_05140 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D GYM47_05135 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D GYM47_05110 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_05115 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_05100 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D GYM47_05105 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D GYM47_15745 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_15740 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_15735 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D GYM47_15730 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D GYM47_08845 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D GYM47_07735 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D GYM47_11565 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D GYM47_12500 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D GYM47_11605 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D GYM47_14150 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D GYM47_14145 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:hpiz00030] D GYM47_06815 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_11100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_06955 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D GYM47_06960 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D GYM47_06085 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D GYM47_00300 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D GYM47_06390 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D GYM47_00130 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D GYM47_04470 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D GYM47_04460 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D GYM47_11335 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GYM47_02585 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GYM47_05900 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D GYM47_06990 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D GYM47_06965 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D GYM47_04060 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D GYM47_11035 pyrroloquinoline quinone-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D GYM47_04865 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D GYM47_14845 trxB; thioredoxin-disulfide reductase K22345 E4.3.1.9; glucosaminate ammonia-lyase [EC:4.3.1.9] D GYM47_00275 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GYM47_09245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:hpiz00040] D GYM47_08735 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GYM47_11495 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GYM47_11330 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GYM47_06085 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D GYM47_04975 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] C 00051 Fructose and mannose metabolism [PATH:hpiz00051] D GYM47_06975 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D GYM47_02585 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GYM47_04735 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D GYM47_11730 HAD-IIB family hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D GYM47_09245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D GYM47_06825 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D GYM47_04970 mannitol dehydrogenase family protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D GYM47_00275 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GYM47_01735 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D GYM47_06970 glycoside hydrolase family 32 protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] D GYM47_06820 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:hpiz00052] D GYM47_00125 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GYM47_11330 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GYM47_11335 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GYM47_02585 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GYM47_06985 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GYM47_09245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D GYM47_06865 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D GYM47_06895 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:hpiz00053] D GYM47_08735 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GYM47_11495 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:hpiz00500] D GYM47_06865 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D GYM47_06895 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D GYM47_11330 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GYM47_11335 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GYM47_02585 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GYM47_06985 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GYM47_06815 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_11100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_06975 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hpiz00520] D GYM47_07855 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D GYM47_06975 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D GYM47_17990 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GYM47_11365 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GYM47_01730 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D GYM47_11350 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D GYM47_17995 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D GYM47_01890 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D GYM47_08745 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D GYM47_13330 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D GYM47_13335 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D GYM47_10685 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D GYM47_10435 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D GYM47_11405 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D GYM47_11400 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D GYM47_15075 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D GYM47_15080 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D GYM47_15090 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D GYM47_15085 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D GYM47_06985 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GYM47_11335 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GYM47_02585 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GYM47_11330 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GYM47_08735 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GYM47_11495 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GYM47_00125 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GYM47_06815 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_11100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_04735 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D GYM47_02785 NAD(P)H-flavin reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:hpiz00620] D GYM47_14110 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_06475 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_14150 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D GYM47_14145 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_17555 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GYM47_13230 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D GYM47_12480 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D GYM47_04520 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D GYM47_04515 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GYM47_13810 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GYM47_06845 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GYM47_02760 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D GYM47_09265 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D GYM47_09270 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D GYM47_07620 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D GYM47_08820 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_13720 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D GYM47_09825 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D GYM47_00380 lldD; FMN-dependent L-lactate dehydrogenase LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D GYM47_04160 ubiquinone-dependent pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D GYM47_01120 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D GYM47_02810 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D GYM47_08410 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D GYM47_13620 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D GYM47_14855 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D GYM47_14265 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D GYM47_03705 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D GYM47_03710 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D GYM47_03700 sodium pump decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D GYM47_11565 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D GYM47_12500 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D GYM47_08845 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D GYM47_07735 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D GYM47_15745 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_15740 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_15735 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D GYM47_15730 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D GYM47_10125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D GYM47_11605 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D GYM47_07870 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GYM47_16955 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_13440 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D GYM47_11040 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hpiz00630] D GYM47_05280 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D GYM47_14110 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_06475 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_16955 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D GYM47_11565 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D GYM47_05095 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D GYM47_14850 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D GYM47_16455 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D GYM47_07890 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_02380 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D GYM47_13965 glcD; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D GYM47_13970 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D GYM47_13975 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D GYM47_05045 catalase K03781 katE; catalase [EC:1.11.1.6] D GYM47_13620 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D GYM47_08815 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D GYM47_01595 HAD family phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D GYM47_06095 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D GYM47_10420 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D GYM47_13920 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D GYM47_01185 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GYM47_11755 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_05730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_09010 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D GYM47_08995 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_09005 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D GYM47_14525 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D GYM47_12175 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D GYM47_06965 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D GYM47_16410 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D GYM47_15455 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GYM47_16400 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GYM47_06110 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GYM47_06105 NADH-quinone oxidoreductase subunit F K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D GYM47_15450 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GYM47_16395 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GYM47_15445 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D GYM47_16390 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D GYM47_05755 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D GYM47_07830 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:hpiz00640] D GYM47_14110 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_06475 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_08450 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D GYM47_09825 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D GYM47_04520 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D GYM47_04515 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GYM47_08235 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D GYM47_08240 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D GYM47_08245 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_02760 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D GYM47_09265 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D GYM47_09270 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D GYM47_07620 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D GYM47_15355 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D GYM47_15795 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_03525 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_15665 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D GYM47_05135 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D GYM47_05140 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D GYM47_12600 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_12930 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_15660 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_06190 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D GYM47_06195 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D GYM47_06200 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D GYM47_07890 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D GYM47_06185 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D GYM47_06840 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:hpiz00650] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_04780 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D GYM47_08285 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D GYM47_08340 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_09830 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D GYM47_13930 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D GYM47_04785 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D GYM47_12785 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D GYM47_05820 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D GYM47_02380 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D GYM47_03710 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D GYM47_17250 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D GYM47_17245 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D GYM47_12175 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D GYM47_05110 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_05115 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_05100 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D GYM47_05105 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D GYM47_15745 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_15740 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_15735 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D GYM47_15730 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D GYM47_15795 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_03525 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_12945 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_15800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_09295 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_16450 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D GYM47_10070 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D GYM47_08975 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D GYM47_08970 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D GYM47_08950 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D GYM47_14790 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GYM47_15210 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GYM47_14785 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D GYM47_07215 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:hpiz00660] D GYM47_14790 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GYM47_15210 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GYM47_14785 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D GYM47_05135 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D GYM47_05140 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D GYM47_07575 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D GYM47_07580 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D GYM47_07585 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:hpiz00562] D GYM47_03230 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D GYM47_09040 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D GYM47_12600 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_12930 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_15660 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_01735 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:hpiz00190] D GYM47_06090 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D GYM47_05110 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_05115 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_05100 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D GYM47_05105 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D GYM47_15745 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_15740 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_15735 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D GYM47_15730 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D GYM47_10640 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D GYM47_10635 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D GYM47_10630 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D GYM47_04510 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D GYM47_04505 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D GYM47_08085 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D GYM47_08075 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D GYM47_06780 ctaD; cytochrome c oxidase subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9] D GYM47_06775 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D GYM47_08070 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D GYM47_08080 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D GYM47_08100 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D GYM47_14015 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D GYM47_14020 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D GYM47_14025 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D GYM47_14030 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D GYM47_04500 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D GYM47_04495 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D GYM47_04490 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D GYM47_07980 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D GYM47_07985 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D GYM47_18035 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D GYM47_18025 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D GYM47_18030 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D GYM47_18040 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D GYM47_18020 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D GYM47_18055 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D GYM47_18045 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D GYM47_18050 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D GYM47_09255 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D GYM47_14350 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:hpiz00710] D GYM47_00280 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D GYM47_06850 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GYM47_07430 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GYM47_00275 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GYM47_00300 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D GYM47_00130 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D GYM47_11910 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D GYM47_01735 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D GYM47_06085 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D GYM47_06390 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D GYM47_10125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D GYM47_11605 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D GYM47_14265 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D GYM47_11565 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:hpiz00720] D GYM47_07870 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GYM47_10125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D GYM47_11565 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D GYM47_08845 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D GYM47_07735 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D GYM47_05110 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_05115 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_05100 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D GYM47_05105 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D GYM47_15745 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_15740 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_15735 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D GYM47_15730 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D GYM47_05140 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D GYM47_05135 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_05320 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D GYM47_14850 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D GYM47_16455 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D GYM47_07890 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D GYM47_02760 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D GYM47_09265 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D GYM47_09270 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D GYM47_07620 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D GYM47_08920 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D GYM47_00320 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D GYM47_04515 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GYM47_04520 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D GYM47_14110 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_06475 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:hpiz00680] D GYM47_05715 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D GYM47_13230 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D GYM47_13225 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D GYM47_15455 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GYM47_16400 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GYM47_06110 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D GYM47_06105 NADH-quinone oxidoreductase subunit F K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9] D GYM47_15450 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GYM47_16395 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D GYM47_15445 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D GYM47_16390 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D GYM47_16410 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D GYM47_11755 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_05730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_13920 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D GYM47_08815 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D GYM47_03635 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GYM47_10125 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D GYM47_11565 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D GYM47_00275 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D GYM47_09245 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D GYM47_04520 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D GYM47_04515 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GYM47_14110 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_06475 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_07870 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D GYM47_16725 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D GYM47_00185 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GYM47_16415 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GYM47_16640 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GYM47_09120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D GYM47_11085 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:hpiz00910] D GYM47_04330 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D GYM47_05000 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D GYM47_04995 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D GYM47_04990 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D GYM47_04210 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D GYM47_04205 NAD(P)/FAD-dependent oxidoreductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D GYM47_04200 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D GYM47_04195 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D GYM47_08320 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D GYM47_05380 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D GYM47_01355 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D GYM47_01185 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GYM47_03615 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D GYM47_03620 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D GYM47_04985 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] D GYM47_08705 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:hpiz00920] D GYM47_06080 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D GYM47_06075 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D GYM47_06070 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D GYM47_06065 cysA; sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D GYM47_11160 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D GYM47_11165 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D GYM47_11325 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D GYM47_06170 phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D GYM47_08615 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D GYM47_02100 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D GYM47_15770 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D GYM47_13510 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D GYM47_10960 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D GYM47_03220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D GYM47_01865 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D GYM47_03440 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D GYM47_07645 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D GYM47_04775 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D GYM47_04770 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D GYM47_06485 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:hpiz00061] D GYM47_02760 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D GYM47_09265 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D GYM47_09270 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D GYM47_07620 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D GYM47_10380 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D GYM47_10390 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D GYM47_14445 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D GYM47_00730 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D GYM47_13665 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GYM47_10375 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GYM47_17295 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_09330 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_10385 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_00735 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D GYM47_02735 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D GYM47_12785 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D GYM47_17950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_06360 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_08295 acyl--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:hpiz00071] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06615 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_08340 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D GYM47_06565 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D GYM47_09760 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D GYM47_03545 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D GYM47_17950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_06360 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_08295 acyl--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_04015 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D GYM47_17425 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D GYM47_13230 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D GYM47_17555 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:hpiz00561] D GYM47_14525 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_12480 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D GYM47_09805 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D GYM47_10395 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D GYM47_13275 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D GYM47_00725 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D GYM47_02425 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D GYM47_14425 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D GYM47_12155 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D GYM47_12720 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:hpiz00564] D GYM47_10835 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D GYM47_09795 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D GYM47_13275 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D GYM47_00725 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D GYM47_02425 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D GYM47_14425 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D GYM47_06020 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D GYM47_12430 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D GYM47_07880 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D GYM47_09845 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D GYM47_04015 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D GYM47_03000 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D GYM47_03005 ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D GYM47_02980 class I SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D GYM47_02705 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D GYM47_15610 phosphatidylcholine/phosphatidylserine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24] D GYM47_14770 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D GYM47_10965 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D GYM47_06260 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D GYM47_11660 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D GYM47_12950 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D GYM47_14125 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D GYM47_17865 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D GYM47_08840 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:hpiz00565] D GYM47_06020 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D GYM47_06020 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D GYM47_06020 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:hpiz00592] D GYM47_06020 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D GYM47_06615 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:hpiz01040] D GYM47_11775 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D GYM47_14260 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D GYM47_17360 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:hpiz00230] D GYM47_11180 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D GYM47_11340 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D GYM47_11625 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D GYM47_04460 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D GYM47_11335 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GYM47_02585 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GYM47_05900 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D GYM47_07640 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D GYM47_11920 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D GYM47_07710 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D GYM47_14245 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D GYM47_07715 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D GYM47_12240 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D GYM47_12245 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D GYM47_14175 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D GYM47_05295 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D GYM47_09290 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GYM47_07785 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D GYM47_13380 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D GYM47_11620 yrfG; GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D GYM47_04455 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D GYM47_14800 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D GYM47_07860 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D GYM47_03860 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D GYM47_03200 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D GYM47_18165 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D GYM47_07790 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D GYM47_08045 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D GYM47_08040 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D GYM47_16965 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D GYM47_16970 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D GYM47_16975 2Fe-2S iron-sulfur cluster binding domain-containing protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D GYM47_03865 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D GYM47_04390 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D GYM47_08030 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D GYM47_17505 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D GYM47_00690 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GYM47_10285 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GYM47_10280 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D GYM47_00245 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D GYM47_17495 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D GYM47_02770 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D GYM47_10135 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D GYM47_07510 RelA/SpoT domain-containing protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D GYM47_10890 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D GYM47_09020 DUF3412 domain-containing protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D GYM47_08000 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D GYM47_14140 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D GYM47_10130 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D GYM47_11170 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D GYM47_13295 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D GYM47_11160 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D GYM47_11165 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D GYM47_13880 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D GYM47_13885 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D GYM47_13855 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3] D GYM47_13850 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5] D GYM47_13820 (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D GYM47_13815 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D GYM47_16480 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D GYM47_16485 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D GYM47_16490 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D GYM47_05435 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:hpiz00240] D GYM47_01700 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D GYM47_01695 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D GYM47_00225 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D GYM47_08930 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D GYM47_05385 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D GYM47_17920 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D GYM47_06210 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D GYM47_02690 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D GYM47_03200 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D GYM47_10130 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D GYM47_10795 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D GYM47_03625 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D GYM47_09105 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D GYM47_13380 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D GYM47_07800 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D GYM47_09020 DUF3412 domain-containing protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D GYM47_04450 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D GYM47_07705 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D GYM47_00690 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GYM47_10285 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GYM47_10280 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D GYM47_10360 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D GYM47_02590 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D GYM47_04465 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D GYM47_11520 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D GYM47_15535 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D GYM47_15540 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D GYM47_15530 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D GYM47_15525 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D GYM47_15685 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:hpiz00250] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_06240 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D GYM47_13645 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D GYM47_07940 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D GYM47_08375 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D GYM47_05420 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D GYM47_13920 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D GYM47_02630 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D GYM47_09235 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D GYM47_17165 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D GYM47_10890 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D GYM47_05295 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D GYM47_00225 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D GYM47_15795 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_03525 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_12945 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_15800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_09295 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_03615 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D GYM47_03620 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D GYM47_05380 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D GYM47_01355 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D GYM47_06710 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D GYM47_01185 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GYM47_01700 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D GYM47_01695 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D GYM47_07135 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D GYM47_17990 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GYM47_11365 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GYM47_07640 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:hpiz00260] D GYM47_03670 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D GYM47_07590 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D GYM47_02475 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D GYM47_14580 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D GYM47_02480 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D GYM47_12100 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D GYM47_04145 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D GYM47_11755 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_05730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_13920 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D GYM47_08815 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D GYM47_13620 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D GYM47_14525 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D GYM47_16725 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D GYM47_00185 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D GYM47_16415 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GYM47_16640 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GYM47_09120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D GYM47_11085 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D GYM47_09010 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D GYM47_08995 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_09005 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D GYM47_14770 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D GYM47_09755 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D GYM47_15205 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D GYM47_09750 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D GYM47_05720 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D GYM47_05725 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D GYM47_05680 dgcA; dimethylglycine demethylation protein DgcA K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D GYM47_05685 DUF3483 domain-containing protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit D GYM47_05690 electron transfer flavoprotein subunit alpha/FixB family protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha D GYM47_05695 electron transfer flavoprotein subunit beta K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D GYM47_05745 sarcosine oxidase subunit alpha family protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D GYM47_05735 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D GYM47_05750 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D GYM47_05740 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D GYM47_13240 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D GYM47_05760 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D GYM47_00135 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D GYM47_03435 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D GYM47_12400 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D GYM47_07615 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D GYM47_12405 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D GYM47_07610 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D GYM47_08690 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D GYM47_08695 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D GYM47_08685 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] D GYM47_14595 thpD; ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55] D GYM47_13615 doeA; ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D GYM47_13610 doeB; N-alpha-acetyl diaminobutyric acid deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D GYM47_13595 aspartate aminotransferase family protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D GYM47_13600 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:hpiz00270] D GYM47_03220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D GYM47_01985 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D GYM47_08625 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D GYM47_12725 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D GYM47_14355 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D GYM47_00305 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D GYM47_13345 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D GYM47_16690 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D GYM47_08925 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D GYM47_15275 S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D GYM47_14800 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D GYM47_15255 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D GYM47_15260 mtnB; methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D GYM47_15265 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D GYM47_15270 cupin K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D GYM47_07755 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D GYM47_13570 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D GYM47_15970 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D GYM47_03670 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D GYM47_07590 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D GYM47_02475 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D GYM47_01865 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D GYM47_03440 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D GYM47_07645 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D GYM47_02895 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_03315 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_11590 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D GYM47_00210 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_13510 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D GYM47_10960 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D GYM47_03435 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D GYM47_11565 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D GYM47_13240 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D GYM47_05760 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D GYM47_10145 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D GYM47_16415 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GYM47_16640 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GYM47_09120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:hpiz00280] D GYM47_02895 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_03315 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_08235 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D GYM47_08240 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D GYM47_08245 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_10050 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_06615 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D GYM47_17450 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D GYM47_10005 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D GYM47_12600 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_12930 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_15660 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_15360 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-] D GYM47_15665 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D GYM47_15795 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_03525 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_10065 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D GYM47_10055 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D GYM47_10060 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D GYM47_16450 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D GYM47_10070 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D GYM47_08975 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D GYM47_08970 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hpiz00290] D GYM47_00135 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D GYM47_07575 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D GYM47_07580 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D GYM47_07585 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D GYM47_14790 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GYM47_15210 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GYM47_14785 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D GYM47_14775 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D GYM47_12260 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D GYM47_11635 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D GYM47_02895 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_03315 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_05420 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D GYM47_13440 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D GYM47_11040 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:hpiz00300] D GYM47_02475 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D GYM47_03670 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D GYM47_07590 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D GYM47_12375 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D GYM47_14185 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D GYM47_01690 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D GYM47_02655 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D GYM47_12760 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D GYM47_02665 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D GYM47_02650 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D GYM47_17150 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D GYM47_13055 type III PLP-dependent enzyme K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D GYM47_17155 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D GYM47_10570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D GYM47_10565 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:hpiz00310] D GYM47_05125 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_03545 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_03435 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D GYM47_15795 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_03525 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_12945 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_15800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_09295 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_03555 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D GYM47_17325 DUF1338 family protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D GYM47_06130 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D GYM47_03540 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D GYM47_15570 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D GYM47_16345 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D GYM47_08890 FAD-binding oxidoreductase K26064 amaD; D-lysine oxidase D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_12140 DUF971 domain-containing protein K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1] C 00220 Arginine biosynthesis [PATH:hpiz00220] D GYM47_06280 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D GYM47_09235 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D GYM47_17165 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D GYM47_11010 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D GYM47_11025 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D GYM47_16480 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D GYM47_16485 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D GYM47_16490 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D GYM47_07135 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D GYM47_01185 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GYM47_01700 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D GYM47_01695 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D GYM47_05380 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D GYM47_01355 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_05420 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D GYM47_03830 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D GYM47_10500 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D GYM47_02580 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D GYM47_18105 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D GYM47_12760 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D GYM47_01265 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:hpiz00330] D GYM47_04710 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D GYM47_14585 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D GYM47_16115 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D GYM47_10490 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D GYM47_16690 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D GYM47_13345 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_04155 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D GYM47_15220 speB; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D GYM47_12750 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D GYM47_12755 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D GYM47_12740 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D GYM47_12745 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D GYM47_12190 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D GYM47_01875 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D GYM47_06710 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D GYM47_01345 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D GYM47_07325 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_12560 proline racemase family protein K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77] C 00340 Histidine metabolism [PATH:hpiz00340] D GYM47_10680 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D GYM47_10895 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D GYM47_14320 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D GYM47_08655 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D GYM47_14695 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D GYM47_14690 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D GYM47_14700 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D GYM47_14685 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D GYM47_14740 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_03320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_10675 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:hpiz00350] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_14740 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_03320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_13230 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D GYM47_17555 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GYM47_12945 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_15800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_09295 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:hpiz00360] D GYM47_08325 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D GYM47_04780 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D GYM47_08285 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_14740 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_03320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_15880 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D GYM47_16070 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:hpiz00380] D GYM47_05125 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_03545 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_05045 catalase K03781 katE; catalase [EC:1.11.1.6] D GYM47_16070 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hpiz00400] D GYM47_02790 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D GYM47_10215 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D GYM47_03610 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D GYM47_17320 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D GYM47_17280 sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D GYM47_17285 shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D GYM47_03135 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D GYM47_03605 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D GYM47_09110 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D GYM47_05805 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D GYM47_10100 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D GYM47_06115 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D GYM47_10105 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D GYM47_06120 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D GYM47_07605 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D GYM47_06125 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D GYM47_12400 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D GYM47_07615 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D GYM47_12405 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D GYM47_07610 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D GYM47_09115 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_14740 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_03320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:hpiz00410] D GYM47_01800 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D GYM47_15795 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_03525 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_01805 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D GYM47_15535 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D GYM47_15540 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D GYM47_15530 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D GYM47_15525 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D GYM47_15685 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D GYM47_15665 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_15355 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D GYM47_12600 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_12930 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D GYM47_15660 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:hpiz00430] D GYM47_04255 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D GYM47_07875 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D GYM47_02630 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D GYM47_05380 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D GYM47_04515 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D GYM47_04520 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D GYM47_15200 SDR family NAD(P)-dependent oxidoreductase K15373 isfD; sulfoacetaldehyde reductase [EC:1.1.1.313] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:hpiz00450] D GYM47_01985 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D GYM47_08625 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D GYM47_12725 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D GYM47_14355 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D GYM47_06660 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D GYM47_11160 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D GYM47_11165 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D GYM47_14725 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D GYM47_09150 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:hpiz00460] D GYM47_04255 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D GYM47_07875 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D GYM47_13645 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D GYM47_07940 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D GYM47_11755 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_05730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:hpiz00470] D GYM47_13355 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D GYM47_10535 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D GYM47_03435 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10] D GYM47_07135 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D GYM47_05370 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D GYM47_10555 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D GYM47_17150 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D GYM47_13055 type III PLP-dependent enzyme K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D GYM47_17155 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D GYM47_15880 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:hpiz00480] D GYM47_04255 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D GYM47_07875 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D GYM47_02210 gamma-glutamylcyclotransferase K00682 GGCT; gamma-glutamylcyclotransferase [EC:4.3.2.9] D GYM47_15865 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D GYM47_16045 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D GYM47_16050 pxpB; 5-oxoprolinase subunit PxpB K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D GYM47_16055 biotin-dependent carboxyltransferase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D GYM47_11590 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D GYM47_00210 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D GYM47_02900 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D GYM47_10875 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D GYM47_14535 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D GYM47_12330 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_16665 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_01560 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_04795 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_10000 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_08700 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D GYM47_05320 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D GYM47_06955 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D GYM47_12795 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D GYM47_16690 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D GYM47_15100 FkbM family methyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:hpiz00540] D GYM47_02740 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D GYM47_10515 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D GYM47_02730 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D GYM47_08195 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D GYM47_02745 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D GYM47_10455 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D GYM47_10720 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D GYM47_03630 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D GYM47_10725 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D GYM47_10445 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D GYM47_00085 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D GYM47_13350 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D GYM47_04745 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D GYM47_04805 DUF2219 family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D GYM47_00070 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D GYM47_10610 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D GYM47_00080 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D GYM47_00025 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D GYM47_00040 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D GYM47_00045 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D GYM47_11460 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hpiz00541] D GYM47_11330 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D GYM47_00125 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D GYM47_08735 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GYM47_11495 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D GYM47_00720 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D GYM47_02785 NAD(P)H-flavin reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D GYM47_04735 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D GYM47_17995 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D GYM47_11405 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D GYM47_11400 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D GYM47_15075 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D GYM47_15080 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D GYM47_15090 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D GYM47_15085 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:hpiz00550] D GYM47_10685 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D GYM47_10435 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D GYM47_10540 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D GYM47_10555 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D GYM47_10570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D GYM47_10535 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D GYM47_10565 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D GYM47_02700 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D GYM47_18005 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_09545 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_01225 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_10560 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D GYM47_10545 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D GYM47_13220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D GYM47_03575 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D GYM47_07345 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D GYM47_10575 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D GYM47_07365 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D GYM47_14430 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:hpiz00552] D GYM47_18005 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_09545 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_01225 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_11390 glycosyltransferase K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355] D GYM47_12155 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D GYM47_12720 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:hpiz00543] D GYM47_03220 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D GYM47_11480 oligosaccharide biosynthesis protein Alg14 K25903 pssD; exopolysaccharide biosynthesis glucuronosyltransferase PssD D GYM47_11475 glycosyl transferase family 28 K25904 pssE; exopolysaccharide biosynthesis glucuronosyltransferase PssE B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:hpiz00730] D GYM47_04570 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D GYM47_17095 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D GYM47_18120 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D GYM47_03210 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GYM47_14835 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D GYM47_16655 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D GYM47_17015 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D GYM47_01105 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D GYM47_01100 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D GYM47_11665 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D GYM47_10955 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D GYM47_14140 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D GYM47_04575 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:hpiz00740] D GYM47_16680 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D GYM47_04705 ribA; GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D GYM47_11680 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D GYM47_11685 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D GYM47_04700 RibD family protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D GYM47_17135 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D GYM47_11675 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D GYM47_07775 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D GYM47_15040 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D GYM47_01105 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D GYM47_11180 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D GYM47_11340 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D GYM47_07300 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:hpiz00750] D GYM47_08580 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D GYM47_00285 erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D GYM47_05410 pdxB; 4-phosphoerythronate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D GYM47_09120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D GYM47_13315 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D GYM47_10160 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D GYM47_02480 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:hpiz00760] D GYM47_06240 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D GYM47_14210 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D GYM47_14160 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D GYM47_12270 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D GYM47_04455 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D GYM47_13380 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D GYM47_08830 bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D GYM47_07330 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D GYM47_10130 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D GYM47_08430 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D GYM47_12970 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D GYM47_14825 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D GYM47_03650 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D GYM47_03025 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D GYM47_06740 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D GYM47_07470 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D GYM47_16105 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D GYM47_16100 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D GYM47_12945 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_15800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D GYM47_09295 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:hpiz00770] D GYM47_14790 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GYM47_15210 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D GYM47_14785 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D GYM47_14775 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D GYM47_12260 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D GYM47_11635 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D GYM47_01810 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D GYM47_09995 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D GYM47_01805 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D GYM47_00850 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D GYM47_02595 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D GYM47_10130 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D GYM47_14450 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D GYM47_09070 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D GYM47_10155 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D GYM47_06315 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D GYM47_02895 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_03315 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_15535 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1] D GYM47_15540 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1] D GYM47_15530 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D GYM47_15525 acyltransferase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D GYM47_15685 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D GYM47_01800 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:hpiz00780] D GYM47_03040 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D GYM47_00730 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D GYM47_13665 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GYM47_10375 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GYM47_17295 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_09330 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_10385 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_02735 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D GYM47_03045 alpha/beta fold hydrolase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D GYM47_03050 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D GYM47_11300 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D GYM47_03030 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D GYM47_03035 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D GYM47_03055 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D GYM47_00845 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:hpiz00785] D GYM47_07375 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D GYM47_07380 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_14150 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D GYM47_14145 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D GYM47_05120 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D GYM47_05125 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D GYM47_08235 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D GYM47_08240 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D GYM47_08245 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D GYM47_09010 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D GYM47_08995 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D GYM47_09005 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:hpiz00790] D GYM47_09300 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D GYM47_03515 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D GYM47_13280 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D GYM47_13285 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D GYM47_16600 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D GYM47_01815 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D GYM47_01725 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D GYM47_11515 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D GYM47_07625 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D GYM47_16680 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D GYM47_04705 ribA; GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D GYM47_11680 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D GYM47_06175 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D GYM47_10370 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D GYM47_04685 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D GYM47_07680 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D GYM47_07915 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D GYM47_07920 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D GYM47_05500 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D GYM47_15500 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D GYM47_07815 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D GYM47_07820 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D GYM47_15435 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D GYM47_15430 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D GYM47_15495 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D GYM47_16985 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D GYM47_15490 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:hpiz00670] D GYM47_11515 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D GYM47_08920 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D GYM47_11755 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_05730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D GYM47_07710 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D GYM47_09290 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GYM47_03105 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D GYM47_08995 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D GYM47_08625 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D GYM47_11520 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D GYM47_05755 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D GYM47_07830 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D GYM47_00320 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D GYM47_00140 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:hpiz00860] D GYM47_05075 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GYM47_05925 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D GYM47_18125 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D GYM47_14345 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D GYM47_17175 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D GYM47_17180 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D GYM47_16685 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D GYM47_03130 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D GYM47_14060 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D GYM47_18115 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D GYM47_06765 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D GYM47_11995 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D GYM47_17185 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D GYM47_04215 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D GYM47_07690 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D GYM47_04510 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D GYM47_08100 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D GYM47_07050 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D GYM47_07060 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D GYM47_10885 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D GYM47_07155 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D GYM47_07000 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D GYM47_07010 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D GYM47_07025 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D GYM47_07015 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D GYM47_06995 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D GYM47_01520 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D GYM47_07020 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D GYM47_07005 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D GYM47_02925 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hpiz00130] D GYM47_17420 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D GYM47_17415 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D GYM47_02780 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D GYM47_07300 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GYM47_00170 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D GYM47_08740 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D GYM47_00165 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D GYM47_14305 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D GYM47_03445 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D GYM47_15765 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D GYM47_15760 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D GYM47_15755 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D GYM47_15720 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D GYM47_15715 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D GYM47_15725 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D GYM47_15775 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D GYM47_12180 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D GYM47_08595 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:hpiz00900] D GYM47_16655 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D GYM47_02710 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D GYM47_13395 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D GYM47_05910 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D GYM47_13390 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D GYM47_03180 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D GYM47_15020 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_07300 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D GYM47_16650 ispA; (2E,6E)-farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D GYM47_01325 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D GYM47_02700 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:hpiz00907] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_16450 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D GYM47_10070 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D GYM47_06615 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D GYM47_00300 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D GYM47_00720 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D GYM47_15765 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D GYM47_15165 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D GYM47_04665 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:hpiz00332] D GYM47_01345 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D GYM47_07325 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:hpiz00261] D GYM47_11160 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D GYM47_11165 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D GYM47_03670 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D GYM47_07590 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D GYM47_12375 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D GYM47_14185 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D GYM47_01690 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:hpiz00521] D GYM47_06985 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D GYM47_11335 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D GYM47_02585 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D GYM47_03230 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D GYM47_09040 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D GYM47_00720 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D GYM47_06985 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:hpiz00401] D GYM47_09110 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_14740 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_03320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis [PATH:hpiz00405] D GYM47_15630 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D GYM47_10100 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D GYM47_06115 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D GYM47_10105 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D GYM47_10390 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D GYM47_17295 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_09330 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_10385 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D GYM47_10380 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:hpiz00999] D GYM47_00305 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D GYM47_03135 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites [PATH:hpiz00997] D GYM47_13050 IucA/IucC family siderophore biosynthesis protein K23374 sbnF; 2-[(L-alanin-3-ylcarbamoyl)methyl]-3-(2-aminoethylcarbamoyl)-2-hydroxypropanoate synthase [EC:6.3.2.55] D GYM47_13040 AcsA protein K23375 sbnC; staphyloferrin B synthase [EC:6.3.2.56] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:hpiz00362] D GYM47_16260 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D GYM47_16290 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D GYM47_16255 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D GYM47_16285 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D GYM47_16280 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D GYM47_16275 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D GYM47_16265 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D GYM47_16295 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D GYM47_16305 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D GYM47_16300 catC; muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D GYM47_17235 alpha/beta fold hydrolase K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44] D GYM47_06615 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D GYM47_17240 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D GYM47_17225 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D GYM47_17230 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D GYM47_17255 adenylosuccinate lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D GYM47_17200 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D GYM47_08340 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D GYM47_03710 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D GYM47_03545 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D GYM47_04780 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D GYM47_08285 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:hpiz00627] D GYM47_08820 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D GYM47_07300 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:hpiz00364] D GYM47_16260 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D GYM47_16290 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D GYM47_16255 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D GYM47_16285 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D GYM47_16280 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D GYM47_16275 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D GYM47_16265 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D GYM47_16295 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D GYM47_16305 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:hpiz00625] D GYM47_17555 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GYM47_13230 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D GYM47_15910 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D GYM47_05715 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D GYM47_13670 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D GYM47_13580 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D GYM47_16435 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hpiz00361] D GYM47_16265 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D GYM47_16295 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D GYM47_16305 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D GYM47_13580 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D GYM47_16435 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D GYM47_13670 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:hpiz00623] D GYM47_16265 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D GYM47_16295 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D GYM47_16305 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00622 Xylene degradation [PATH:hpiz00622] D GYM47_16260 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D GYM47_16290 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D GYM47_16255 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D GYM47_16285 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D GYM47_16280 ring-hydroxylating dioxygenase ferredoxin reductase family protein K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D GYM47_16275 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] C 00633 Nitrotoluene degradation [PATH:hpiz00633] D GYM47_15835 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D GYM47_06615 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation D GYM47_17250 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D GYM47_17245 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:hpiz00791] D GYM47_11025 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D GYM47_11010 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D GYM47_16480 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D GYM47_16485 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D GYM47_16490 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:hpiz00930] D GYM47_08290 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D GYM47_06610 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] C 00363 Bisphenol degradation C 00621 Dioxin degradation D GYM47_16310 salA; salicylate 1-monooxygenase K00480 E1.14.13.1; salicylate hydroxylase [EC:1.14.13.1] C 00626 Naphthalene degradation [PATH:hpiz00626] D GYM47_16310 salA; salicylate 1-monooxygenase K00480 E1.14.13.1; salicylate hydroxylase [EC:1.14.13.1] D GYM47_17555 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D GYM47_13230 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:hpiz00624] D GYM47_16310 salA; salicylate 1-monooxygenase K00480 E1.14.13.1; salicylate hydroxylase [EC:1.14.13.1] D GYM47_17225 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D GYM47_17230 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:hpiz03020] D GYM47_00905 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D GYM47_00910 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D GYM47_01065 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D GYM47_17500 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D GYM47_01310 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:hpiz03010] D GYM47_09100 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D GYM47_02680 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D GYM47_00970 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D GYM47_01060 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D GYM47_01025 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D GYM47_12040 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D GYM47_00920 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D GYM47_01010 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D GYM47_10645 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D GYM47_00935 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D GYM47_01055 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D GYM47_00915 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D GYM47_01050 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D GYM47_01005 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D GYM47_01780 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D GYM47_02445 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D GYM47_00985 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D GYM47_12035 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D GYM47_00960 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D GYM47_15050 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D GYM47_13265 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D GYM47_00890 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D GYM47_00955 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D GYM47_00940 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D GYM47_00945 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D GYM47_01000 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D GYM47_01015 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D GYM47_00900 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D GYM47_12025 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D GYM47_00895 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D GYM47_00885 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D GYM47_10650 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D GYM47_00990 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D GYM47_01035 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D GYM47_00975 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D GYM47_01070 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D GYM47_01020 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D GYM47_02460 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D GYM47_08130 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D GYM47_01330 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D GYM47_00965 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D GYM47_00950 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D GYM47_00995 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D GYM47_05895 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D GYM47_01335 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D GYM47_02605 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D GYM47_00980 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D GYM47_01030 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D GYM47_14270 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D GYM47_10400 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D GYM47_02610 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D GYM47_18200 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D GYM47_08125 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D GYM47_01045 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D GYM47_00230 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D GYM47_00235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:hpiz00970] D GYM47_08015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GYM47_14755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GYM47_05080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GYM47_06275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GYM47_03685 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GYM47_03690 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GYM47_08910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GYM47_05850 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D GYM47_05855 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D GYM47_05860 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D GYM47_13985 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D GYM47_13995 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D GYM47_14000 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D GYM47_06250 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D GYM47_05905 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D GYM47_14655 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D GYM47_05085 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GYM47_05455 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GYM47_05465 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GYM47_05475 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GYM47_00860 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_05460 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_05470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_05480 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_06255 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_08900 tRNA-His K14226 tRNA-His; tRNA His D GYM47_08905 tRNA-His K14226 tRNA-His; tRNA His D GYM47_08010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D GYM47_14760 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D GYM47_12055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_12060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_12065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_01745 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_06245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_09315 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_14215 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D GYM47_14220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D GYM47_01750 tRNA-Met K14230 tRNA-Met; tRNA Met D GYM47_02375 tRNA-Met K14230 tRNA-Met; tRNA Met D GYM47_09735 tRNA-Met K14230 tRNA-Met; tRNA Met D GYM47_13085 tRNA-Ile K14230 tRNA-Met; tRNA Met D GYM47_05880 tRNA-Met K14230 tRNA-Met; tRNA Met D GYM47_14660 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D GYM47_01320 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GYM47_09035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GYM47_08915 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GYM47_05515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GYM47_08480 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GYM47_03680 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GYM47_00865 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GYM47_14650 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GYM47_00870 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D GYM47_00855 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D GYM47_07745 tRNA-Val K14237 tRNA-Val; tRNA Val D GYM47_07750 tRNA-Val K14237 tRNA-Val; tRNA Val D GYM47_13990 tRNA-Val K14237 tRNA-Val; tRNA Val D GYM47_14005 tRNA-Val K14237 tRNA-Val; tRNA Val D GYM47_05075 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GYM47_15690 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D GYM47_10820 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D GYM47_10825 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D GYM47_10815 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D GYM47_08205 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D GYM47_03665 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D GYM47_08805 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D GYM47_00035 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D GYM47_00030 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D GYM47_08115 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D GYM47_06145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D GYM47_08210 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D GYM47_09150 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D GYM47_03105 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D GYM47_02860 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D GYM47_07495 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D GYM47_15035 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D GYM47_02515 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D GYM47_14280 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D GYM47_09870 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D GYM47_03175 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D GYM47_08135 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D GYM47_08140 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D GYM47_01895 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D GYM47_14995 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:hpiz03060] D GYM47_01040 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D GYM47_00875 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D GYM47_01740 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D GYM47_03240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D GYM47_03235 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D GYM47_03245 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D GYM47_18190 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GYM47_10505 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D GYM47_00195 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D GYM47_02440 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D GYM47_02555 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D GYM47_14325 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D GYM47_14330 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D GYM47_14335 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D GYM47_10180 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D GYM47_15030 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D GYM47_16900 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D GYM47_17670 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:hpiz04122] D GYM47_03210 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GYM47_13510 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D GYM47_10960 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D GYM47_14200 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D GYM47_06520 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D GYM47_08555 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D GYM47_08550 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D GYM47_08545 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D GYM47_08560 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D GYM47_05305 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D GYM47_07820 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D GYM47_15500 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D GYM47_05945 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D GYM47_07815 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D GYM47_15435 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D GYM47_17010 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:hpiz03018] D GYM47_11550 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D GYM47_10430 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D GYM47_10225 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D GYM47_03635 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GYM47_01785 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D GYM47_07080 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D GYM47_07955 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D GYM47_12050 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D GYM47_04380 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D GYM47_15250 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D GYM47_02775 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D GYM47_07825 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D GYM47_01655 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GYM47_09345 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GYM47_10915 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D GYM47_14350 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D GYM47_01820 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:hpiz03030] D GYM47_13195 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_14075 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08425 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08465 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_09210 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_02755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GYM47_06290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GYM47_10355 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GYM47_07485 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GYM47_02890 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D GYM47_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GYM47_12020 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D GYM47_13260 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D GYM47_00715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GYM47_08420 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D GYM47_02750 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D GYM47_14575 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D GYM47_00310 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_03780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:hpiz03410] D GYM47_09190 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D GYM47_07795 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D GYM47_14670 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D GYM47_03455 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D GYM47_02615 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D GYM47_17525 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D GYM47_15615 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D GYM47_17915 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D GYM47_10235 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D GYM47_09850 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D GYM47_14575 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D GYM47_02485 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D GYM47_00310 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_03780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:hpiz03420] D GYM47_07425 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D GYM47_00705 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D GYM47_08855 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D GYM47_06265 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D GYM47_17350 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GYM47_10335 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GYM47_14575 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D GYM47_00310 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_03780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_01310 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:hpiz03430] D GYM47_03645 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D GYM47_10925 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D GYM47_17350 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GYM47_10335 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GYM47_02405 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D GYM47_03855 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D GYM47_16645 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D GYM47_02485 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D GYM47_00715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GYM47_02755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GYM47_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GYM47_06290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GYM47_07485 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GYM47_10355 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GYM47_13195 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_14075 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08425 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08465 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_09210 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_02890 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D GYM47_00310 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_03780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:hpiz03440] D GYM47_02485 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D GYM47_00715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GYM47_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D GYM47_10165 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D GYM47_06300 recR; recombination protein RecR K06187 recR; recombination protein RecR D GYM47_03655 recA; recombinase RecA K03553 recA; recombination protein RecA D GYM47_14575 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D GYM47_08795 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D GYM47_08790 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D GYM47_08800 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D GYM47_17475 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D GYM47_09675 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D GYM47_12285 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D GYM47_02330 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D GYM47_12265 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D GYM47_02335 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D GYM47_12290 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D GYM47_01445 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D GYM47_02325 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D GYM47_02755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GYM47_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GYM47_06290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GYM47_07485 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GYM47_10355 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GYM47_13195 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_14075 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08425 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08465 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_09210 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_02890 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D GYM47_14275 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D GYM47_15100 FkbM family methyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus D GYM47_02410 peptidase M16 K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:hpiz02010] D GYM47_06080 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D GYM47_06075 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D GYM47_06070 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D GYM47_06065 cysA; sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D GYM47_11145 solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein D GYM47_11135 ABC transporter permease subunit K05773 tupB; tungstate transport system permease protein D GYM47_11140 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D GYM47_05000 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D GYM47_04995 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D GYM47_04990 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D GYM47_08470 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D GYM47_13805 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D GYM47_13800 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D GYM47_13795 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D GYM47_14570 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GYM47_15300 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GYM47_16205 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GYM47_14560 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D GYM47_15305 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D GYM47_14565 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D GYM47_15310 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D GYM47_05960 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D GYM47_05975 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D GYM47_05970 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D GYM47_05965 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D GYM47_12145 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D GYM47_13185 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D GYM47_09740 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D GYM47_13180 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D GYM47_13175 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D GYM47_08215 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D GYM47_08220 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D GYM47_08230 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D GYM47_08225 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D GYM47_06950 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D GYM47_06945 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D GYM47_06940 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D GYM47_04950 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GYM47_06860 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GYM47_06900 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GYM47_05190 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GYM47_04935 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D GYM47_04940 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D GYM47_04945 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D GYM47_04440 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D GYM47_06880 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D GYM47_06875 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D GYM47_06870 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D GYM47_10700 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D GYM47_08260 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GYM47_10705 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GYM47_08270 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GYM47_10710 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GYM47_10695 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D GYM47_08265 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GYM47_10715 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GYM47_05175 carbohydrate ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D GYM47_05180 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D GYM47_05185 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D GYM47_09790 carbohydrate ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D GYM47_09775 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein D GYM47_09780 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein D GYM47_09765 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D GYM47_09770 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D GYM47_15235 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D GYM47_01260 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D GYM47_15240 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D GYM47_01255 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D GYM47_15245 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D GYM47_01250 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D GYM47_15230 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D GYM47_01245 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D GYM47_17365 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D GYM47_06410 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D GYM47_17370 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D GYM47_06415 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D GYM47_17375 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D GYM47_06420 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D GYM47_17380 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D GYM47_06425 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D GYM47_16730 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D GYM47_01500 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D GYM47_16740 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D GYM47_16745 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D GYM47_01510 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D GYM47_01515 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D GYM47_16735 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D GYM47_18095 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein D GYM47_18090 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein D GYM47_18085 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D GYM47_16695 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D GYM47_16700 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D GYM47_16705 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D GYM47_16710 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D GYM47_16715 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D GYM47_15065 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D GYM47_15060 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D GYM47_15055 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D GYM47_12210 transporter substrate-binding domain-containing protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D GYM47_12215 transporter substrate-binding domain-containing protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D GYM47_12205 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D GYM47_12200 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D GYM47_12195 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D GYM47_16250 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_00810 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_06555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_10030 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_16245 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_00820 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_10025 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_00815 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GYM47_10020 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GYM47_16235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_00830 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_10040 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_16230 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_00825 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_10035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_07760 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D GYM47_07765 ABC transporter permease K02072 metI; D-methionine transport system permease protein D GYM47_07770 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D GYM47_16540 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D GYM47_16535 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D GYM47_16530 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D GYM47_16525 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D GYM47_16520 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D GYM47_08400 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D GYM47_08395 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D GYM47_08390 ABC transporter permease K13895 yejE; microcin C transport system permease protein D GYM47_08385 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D GYM47_13115 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D GYM47_13110 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D GYM47_13105 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D GYM47_13100 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D GYM47_16800 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D GYM47_04135 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D GYM47_04125 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D GYM47_03485 zinc ABC transporter solute-binding protein K09815 znuA; zinc transport system substrate-binding protein D GYM47_03520 metal-binding protein ZinT K09815 znuA; zinc transport system substrate-binding protein D GYM47_03495 hypothetical protein K09816 znuB; zinc transport system permease protein D GYM47_03490 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D GYM47_11440 chain-length determining protein K10107 kpsE; capsular polysaccharide transport system permease protein D GYM47_11445 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D GYM47_11425 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D GYM47_10480 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D GYM47_10475 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D GYM47_03740 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D GYM47_03735 heme ABC transporter permease K02195 ccmC; heme exporter protein C D GYM47_03730 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D GYM47_03725 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D GYM47_02905 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D GYM47_02910 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D GYM47_10740 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D GYM47_02565 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D GYM47_02560 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D GYM47_10460 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D GYM47_12835 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D GYM47_11865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D GYM47_02870 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D GYM47_07995 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D GYM47_07990 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D GYM47_04115 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:hpiz02060] D GYM47_06830 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D GYM47_06820 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D GYM47_06825 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D GYM47_11545 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D GYM47_10765 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D GYM47_10755 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:hpiz03070] D GYM47_05010 TolC family outer membrane protein K12340 tolC; outer membrane protein D GYM47_03240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D GYM47_03235 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D GYM47_00875 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D GYM47_01740 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D GYM47_01040 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D GYM47_03245 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D GYM47_18190 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GYM47_10505 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D GYM47_02555 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D GYM47_00195 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D GYM47_02440 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D GYM47_14325 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D GYM47_14330 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D GYM47_14335 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D GYM47_12665 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D GYM47_14895 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D GYM47_14990 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D GYM47_14955 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D GYM47_14920 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D GYM47_14945 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK D GYM47_14940 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:hpiz02020] D GYM47_17405 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GYM47_17410 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D GYM47_17365 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D GYM47_06410 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D GYM47_14365 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D GYM47_14370 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D GYM47_10190 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D GYM47_13695 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D GYM47_13700 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D GYM47_17975 HAMP domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D GYM47_02065 HAMP domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D GYM47_17970 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D GYM47_02060 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D GYM47_00575 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D GYM47_00580 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D GYM47_15105 flagellin FliC K02406 fliC; flagellin D GYM47_16595 flagellin FliC K02406 fliC; flagellin D GYM47_00665 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D GYM47_00585 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GYM47_00670 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GYM47_06930 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D GYM47_06925 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D GYM47_16200 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D GYM47_16195 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D GYM47_16180 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_16545 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_17300 C4-dicarboxylate ABC transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_04260 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_07175 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_16185 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D GYM47_16550 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D GYM47_17305 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D GYM47_04265 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D GYM47_17310 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D GYM47_16190 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D GYM47_16555 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D GYM47_07170 tricarboxylate transporter K07795 tctC; putative tricarboxylic transport membrane protein D GYM47_08100 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D GYM47_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D GYM47_13585 response regulator transcription factor K19610 pfeR; two-component system, OmpR family, response regulator PfeR D GYM47_16560 response regulator K11638 K11638; two-component system, CitB family, response regulator CitT D GYM47_14855 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D GYM47_11855 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D GYM47_15745 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D GYM47_15740 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D GYM47_15735 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C D GYM47_15730 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D D GYM47_10150 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D GYM47_06270 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D GYM47_03675 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D GYM47_02670 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D GYM47_01195 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D GYM47_01200 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D GYM47_01185 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GYM47_14465 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_00370 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D GYM47_00365 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D GYM47_10745 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D GYM47_09050 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D GYM47_15400 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GYM47_00615 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GYM47_06330 EAL domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D GYM47_11720 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_14815 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_15390 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_16460 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_16755 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_05485 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_08365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_12475 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_00605 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_00625 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_01315 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_04300 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_06395 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_15280 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_00610 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_11205 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_11640 PAS domain S-box protein K03776 aer; aerotaxis receptor D GYM47_15420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GYM47_00600 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GYM47_15405 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_00595 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_00630 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GYM47_15395 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GYM47_00620 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GYM47_13940 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D GYM47_13770 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_15350 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_15915 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_16020 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_16375 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_17055 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_07135 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D GYM47_08940 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D GYM47_08945 response regulator transcription factor K15012 regA; two-component system, response regulator RegA D GYM47_10640 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D GYM47_10635 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D GYM47_10630 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D GYM47_14015 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D GYM47_14020 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D GYM47_14025 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D GYM47_14030 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D GYM47_07980 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D GYM47_07985 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D GYM47_05010 TolC family outer membrane protein K12340 tolC; outer membrane protein D GYM47_10440 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D GYM47_11405 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D GYM47_11400 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D GYM47_13730 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D GYM47_00410 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D GYM47_10640 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:hpiz02024] D GYM47_13570 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D GYM47_10915 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D GYM47_10100 anthranilate synthase component I family protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D GYM47_06115 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D GYM47_10105 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D GYM47_02790 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D GYM47_10215 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D GYM47_15630 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D GYM47_17975 HAMP domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D GYM47_02065 HAMP domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D GYM47_17970 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D GYM47_02060 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D GYM47_00575 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D GYM47_00580 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D GYM47_06925 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D GYM47_16250 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_00810 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_06555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_10030 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_16245 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_00820 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_10025 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_00815 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GYM47_10020 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GYM47_16235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_00830 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_10040 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_16230 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_00825 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_10035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_17950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_06360 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_08295 acyl--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_08660 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D GYM47_16680 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D GYM47_04705 ribA; GTP cyclohydrolase II RibA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D GYM47_11685 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D GYM47_04700 RibD family protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D GYM47_01590 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_03345 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_05255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_07280 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_11150 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_01585 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D GYM47_03340 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D GYM47_05250 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D GYM47_07275 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D GYM47_01580 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GYM47_03335 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GYM47_05245 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GYM47_07270 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GYM47_01575 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GYM47_03330 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GYM47_05240 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GYM47_07265 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GYM47_07260 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D GYM47_18190 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GYM47_00875 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D GYM47_01740 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D GYM47_01040 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D GYM47_03245 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D GYM47_10505 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D GYM47_02555 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D GYM47_00195 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D GYM47_02440 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:hpiz02030] D GYM47_11720 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_14815 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_15390 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_16460 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_16755 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_05485 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_08365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_12475 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_00605 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_00625 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_01315 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_04300 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_06395 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_15280 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_00610 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_11205 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_11640 PAS domain S-box protein K03776 aer; aerotaxis receptor D GYM47_06950 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D GYM47_15405 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_00595 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_15420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GYM47_00600 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GYM47_00630 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GYM47_00635 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D GYM47_15395 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GYM47_00620 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GYM47_06330 EAL domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D GYM47_15400 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GYM47_00615 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GYM47_00530 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D GYM47_00500 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D GYM47_00495 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D GYM47_00585 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GYM47_00670 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GYM47_11735 OmpA family protein K02557 motB; chemotaxis protein MotB D GYM47_00590 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D GYM47_00675 OmpA family protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:hpiz02040] D GYM47_00540 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D GYM47_00535 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D GYM47_00530 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D GYM47_00525 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D GYM47_00520 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D GYM47_00515 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D GYM47_00510 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D GYM47_00505 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D GYM47_00500 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D GYM47_00495 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D GYM47_00490 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D GYM47_00485 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D GYM47_00480 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D GYM47_00475 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D GYM47_00660 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D GYM47_00645 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D GYM47_00640 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D GYM47_00415 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D GYM47_00420 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D GYM47_00425 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D GYM47_00430 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D GYM47_00435 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D GYM47_00440 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D GYM47_00445 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D GYM47_00450 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D GYM47_00455 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D GYM47_00460 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D GYM47_00465 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D GYM47_00470 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D GYM47_15105 flagellin FliC K02406 fliC; flagellin D GYM47_16595 flagellin FliC K02406 fliC; flagellin D GYM47_15110 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D GYM47_15115 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D GYM47_00555 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D GYM47_00560 flagellar protein FliT K02423 fliT; flagellar protein FliT D GYM47_00585 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GYM47_00670 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GYM47_11735 OmpA family protein K02557 motB; chemotaxis protein MotB D GYM47_00590 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D GYM47_00675 OmpA family protein K02557 motB; chemotaxis protein MotB D GYM47_00410 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D GYM47_00405 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D GYM47_13255 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D GYM47_00575 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D GYM47_00580 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D GYM47_10745 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D GYM47_00665 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D GYM47_03635 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D GYM47_08625 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:hpiz01501] D GYM47_09915 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D GYM47_07855 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D GYM47_15165 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D GYM47_04665 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D GYM47_05035 TetR family transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon D GYM47_13125 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_05995 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_05020 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GYM47_05990 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GYM47_05010 TolC family outer membrane protein K12340 tolC; outer membrane protein D GYM47_03575 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D GYM47_07345 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D GYM47_10575 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:hpiz01502] D GYM47_10535 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D GYM47_13355 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D GYM47_10565 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D GYM47_10560 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D GYM47_10545 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hpiz01503] D GYM47_10930 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GYM47_10190 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D GYM47_17120 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D GYM47_13125 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_05995 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_05020 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GYM47_05990 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GYM47_05010 TolC family outer membrane protein K12340 tolC; outer membrane protein D GYM47_02740 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:hpiz01000] C 01001 Protein kinases [BR:hpiz01001] D GYM47_12845 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D GYM47_17405 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GYM47_14365 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D GYM47_13695 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D GYM47_17975 HAMP domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D GYM47_02065 HAMP domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D GYM47_06930 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D GYM47_16200 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D GYM47_10150 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D GYM47_16565 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D GYM47_01195 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D GYM47_00370 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D GYM47_13155 HAMP domain-containing histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GYM47_15405 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_00595 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_08940 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D GYM47_13730 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:hpiz01009] D GYM47_10840 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D GYM47_11085 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:hpiz01002] D GYM47_15030 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D GYM47_16900 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D GYM47_17670 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D GYM47_09065 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D GYM47_03865 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D GYM47_04390 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D GYM47_04400 type 1 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D GYM47_05225 glycoside hydrolase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D GYM47_07640 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D GYM47_03615 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D GYM47_17990 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GYM47_11365 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D GYM47_12525 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D GYM47_11125 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D GYM47_13530 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_16910 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_02055 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_04895 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_07420 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_04350 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D GYM47_10875 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D GYM47_00345 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D GYM47_02410 peptidase M16 K01408 IDE; insulysin [EC:3.4.24.56] D GYM47_02900 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D GYM47_05670 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D GYM47_02650 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D GYM47_14535 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D GYM47_04355 peptidoglycan DD-metalloendopeptidase family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D GYM47_02675 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D GYM47_09955 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D GYM47_07250 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D GYM47_00160 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D GYM47_12220 beta-aspartyl-peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D GYM47_01720 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D GYM47_05415 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D GYM47_14205 M48 family metallopeptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D GYM47_02715 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D GYM47_10190 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D GYM47_10670 Do family serine endopeptidase K04691 hhoB; serine protease DegS [EC:3.4.21.-] D GYM47_06345 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D GYM47_07365 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D GYM47_14430 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D GYM47_08170 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D GYM47_11650 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D GYM47_08180 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D GYM47_09630 brxL; protease Lon-related BREX system protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D GYM47_03720 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D GYM47_07840 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D GYM47_17580 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D GYM47_01405 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D GYM47_05775 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D GYM47_10180 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D GYM47_00175 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D GYM47_05870 tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D GYM47_10415 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D GYM47_08440 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D GYM47_06750 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D GYM47_14290 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D GYM47_04255 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D GYM47_07875 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D GYM47_05435 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D GYM47_10770 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D GYM47_10780 tldD; metalloprotease TldD K03568 tldD; TldD protein D GYM47_10900 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D GYM47_10905 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:hpiz01003] D GYM47_15100 FkbM family methyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D GYM47_05150 glycosyltransferase family 1 protein K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D GYM47_12155 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D GYM47_12720 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D GYM47_13220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D GYM47_03575 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D GYM47_00095 DUF3492 domain-containing protein K21011 pelF; polysaccharide biosynthesis protein PelF D GYM47_11390 glycosyltransferase K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355] D GYM47_04720 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D GYM47_11725 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:hpiz01005] D GYM47_02740 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D GYM47_02745 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D GYM47_10515 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D GYM47_02730 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D GYM47_08195 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D GYM47_10455 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D GYM47_13350 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D GYM47_04745 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D GYM47_04805 DUF2219 family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D GYM47_00085 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D GYM47_00070 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D GYM47_03630 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D GYM47_10445 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D GYM47_10725 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D GYM47_10720 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D GYM47_00055 glycosyltransferase family 2 protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D GYM47_00045 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D GYM47_11460 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D GYM47_00075 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D GYM47_10610 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D GYM47_00025 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D GYM47_00080 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D GYM47_00040 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpiz01011] D GYM47_10685 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D GYM47_10435 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D GYM47_10540 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D GYM47_10555 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D GYM47_10570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D GYM47_10535 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D GYM47_13355 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D GYM47_05370 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D GYM47_10560 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D GYM47_10545 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D GYM47_18005 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_09545 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_01225 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D GYM47_15045 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D GYM47_03575 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D GYM47_07345 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D GYM47_10575 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D GYM47_07365 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D GYM47_14430 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D GYM47_13220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D GYM47_13530 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_16910 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_02055 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_04895 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_07420 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D GYM47_04350 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D GYM47_05225 glycoside hydrolase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D GYM47_04355 peptidoglycan DD-metalloendopeptidase family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D GYM47_10850 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D GYM47_11940 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D GYM47_07355 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D GYM47_08405 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D GYM47_14250 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D GYM47_10365 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D GYM47_04070 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D GYM47_07360 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D GYM47_10930 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GYM47_14155 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:hpiz01004] D GYM47_10390 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D GYM47_14445 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D GYM47_00730 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D GYM47_13665 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GYM47_10375 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D GYM47_17295 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_09330 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_10385 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D GYM47_00735 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D GYM47_02735 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D GYM47_12785 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D GYM47_11775 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D GYM47_14260 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D GYM47_17360 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D GYM47_09130 acyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D GYM47_14110 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_06475 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D GYM47_08450 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D GYM47_09825 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D GYM47_17950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_06360 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_08295 acyl--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_06560 long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D GYM47_10075 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D GYM47_10395 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D GYM47_13275 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D GYM47_00725 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D GYM47_02425 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:hpiz01008] C 01006 Prenyltransferases [BR:hpiz01006] D GYM47_16650 ispA; (2E,6E)-farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D GYM47_01325 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D GYM47_02700 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D GYM47_10920 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D GYM47_15775 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D GYM47_17415 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D GYM47_04510 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:hpiz01007] D GYM47_05075 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GYM47_08205 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D GYM47_01835 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D GYM47_01895 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D GYM47_14995 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D GYM47_08210 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D GYM47_14280 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D GYM47_09150 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D GYM47_15035 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D GYM47_02860 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D GYM47_07495 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D GYM47_02515 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D GYM47_08805 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D GYM47_03175 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D GYM47_00035 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D GYM47_00030 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D GYM47_06145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D GYM47_09870 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D GYM47_08115 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D GYM47_03665 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D GYM47_08135 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D GYM47_08140 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D GYM47_07675 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D GYM47_05420 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D GYM47_02665 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D GYM47_14740 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_03320 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D GYM47_03050 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D GYM47_11300 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D GYM47_01985 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D GYM47_15665 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D GYM47_12760 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D GYM47_15795 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_03525 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D GYM47_08690 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D GYM47_03030 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D GYM47_18125 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D GYM47_02895 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_03315 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D GYM47_13920 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D GYM47_09120 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D GYM47_15090 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:hpiz00194] D GYM47_18020 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D GYM47_18025 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D GYM47_18030 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D GYM47_18035 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D GYM47_18040 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D GYM47_18045 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D GYM47_18050 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D GYM47_18055 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D GYM47_18060 F0F1 ATP synthase assembly protein I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:hpiz03000] D GYM47_02995 helix-turn-helix domain-containing protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D GYM47_17205 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D GYM47_07130 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D GYM47_16380 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D GYM47_05665 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D GYM47_12135 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D GYM47_14780 ilvY; HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D GYM47_14360 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D GYM47_08490 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D GYM47_17480 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D GYM47_04110 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D GYM47_06165 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D GYM47_12170 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D GYM47_15550 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D GYM47_08980 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D GYM47_07255 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D GYM47_08835 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D GYM47_15515 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D GYM47_07385 LysR family transcriptional regulator K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D GYM47_16215 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D GYM47_09015 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D GYM47_12410 LysR family transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator D GYM47_04485 DeoR/GlpR transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D GYM47_15295 DeoR/GlpR transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D GYM47_09810 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D GYM47_06835 cra; catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D GYM47_15955 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D GYM47_04870 gntR; gluconate operon transcriptional repressor GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D GYM47_00375 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D GYM47_13960 glcC; transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D GYM47_15810 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D GYM47_03550 csiR; DNA-binding transcriptional regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D GYM47_04285 FCD domain-containing protein K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D GYM47_09745 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D GYM47_02575 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D GYM47_15655 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D GYM47_08050 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D GYM47_13505 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D GYM47_13660 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D GYM47_13680 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D GYM47_15900 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D GYM47_05035 TetR family transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon D GYM47_06470 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D GYM47_13435 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYM47_05940 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYM47_13605 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D GYM47_18160 DNA-binding response regulator K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D GYM47_06890 malT; HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D GYM47_06600 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D GYM47_04845 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D GYM47_16855 merR; Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D GYM47_17760 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D GYM47_02500 MerR family DNA-binding protein K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D GYM47_00780 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D GYM47_01640 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D GYM47_08660 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D GYM47_16620 helix-turn-helix domain-containing protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D GYM47_17315 helix-turn-helix domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D GYM47_14065 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D GYM47_14600 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D GYM47_03215 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D GYM47_05865 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D GYM47_08445 winged helix-turn-helix transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D GYM47_13000 helix-turn-helix domain-containing protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D GYM47_09855 helix-turn-helix domain-containing protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D GYM47_09405 mntR; manganese-binding transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D GYM47_13425 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D GYM47_17345 hexR; transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D GYM47_00845 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D GYM47_09285 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D GYM47_10095 transcriptional regulator K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D GYM47_05070 helix-turn-helix domain-containing protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D GYM47_07205 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D GYM47_14935 sigma-54-dependent Fis family transcriptional regulator K11908 vasH; sigma-54 dependent transcriptional regulator D GYM47_05005 PAS domain S-box protein K12146 hyfR; hydrogenase-4 transcriptional activator D GYM47_17870 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D GYM47_02370 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D GYM47_05260 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D GYM47_06710 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D GYM47_02530 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D GYM47_18065 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GYM47_11305 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D GYM47_04575 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D GYM47_06505 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D GYM47_17880 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D GYM47_05525 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D GYM47_00215 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D GYM47_01840 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GYM47_03505 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GYM47_11690 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:hpiz03021] D GYM47_01310 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D GYM47_01065 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D GYM47_00905 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D GYM47_00910 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D GYM47_17500 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D GYM47_13255 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D GYM47_13360 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D GYM47_10210 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D GYM47_06910 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D GYM47_02570 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D GYM47_10745 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D GYM47_00665 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D GYM47_00795 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D GYM47_01760 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D GYM47_11670 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D GYM47_00880 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D GYM47_10625 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D GYM47_10620 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D GYM47_06380 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D GYM47_10205 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA D GYM47_10200 nucleoside transporter K03598 rseB; sigma-E factor negative regulatory protein RseB D GYM47_01840 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GYM47_03505 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GYM47_01705 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D GYM47_11190 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D GYM47_02775 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:hpiz03019] D GYM47_10430 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D GYM47_10790 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D GYM47_10175 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D GYM47_07825 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D GYM47_12050 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D GYM47_10950 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D GYM47_02355 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D GYM47_10225 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D GYM47_07080 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D GYM47_07955 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D GYM47_04380 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D GYM47_15250 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D GYM47_03635 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GYM47_01785 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D GYM47_02775 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D GYM47_01655 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GYM47_09345 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GYM47_10915 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D GYM47_14350 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D GYM47_01820 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D GYM47_11550 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D GYM47_03675 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D GYM47_07885 RraA family protein K02553 rraA; regulator of ribonuclease activity A D GYM47_10760 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D GYM47_06365 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D GYM47_08055 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:hpiz03011] D GYM47_09100 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D GYM47_02680 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D GYM47_00970 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D GYM47_01060 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D GYM47_01025 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D GYM47_12040 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D GYM47_00920 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D GYM47_01010 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D GYM47_10645 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D GYM47_00935 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D GYM47_01055 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D GYM47_00915 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D GYM47_01050 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D GYM47_01005 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D GYM47_01780 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D GYM47_02445 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D GYM47_00985 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D GYM47_12035 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D GYM47_00960 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D GYM47_15050 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D GYM47_13265 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D GYM47_00890 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D GYM47_00955 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D GYM47_00940 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D GYM47_00945 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D GYM47_01000 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D GYM47_01015 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D GYM47_12025 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D GYM47_00895 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D GYM47_00885 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D GYM47_00900 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D GYM47_10650 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D GYM47_00990 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D GYM47_01035 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D GYM47_00975 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D GYM47_01070 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D GYM47_01020 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D GYM47_02460 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D GYM47_08130 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D GYM47_01330 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D GYM47_00965 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D GYM47_00950 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D GYM47_00995 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D GYM47_01335 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D GYM47_02605 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D GYM47_00980 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D GYM47_01030 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D GYM47_14270 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D GYM47_10400 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D GYM47_02610 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D GYM47_18200 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D GYM47_08125 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D GYM47_01045 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D GYM47_05895 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D GYM47_00230 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D GYM47_00235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:hpiz03009] D GYM47_10175 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D GYM47_12845 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D GYM47_10950 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D GYM47_10170 GTPase Era K03595 era; GTPase D GYM47_01340 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D GYM47_01840 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GYM47_03505 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D GYM47_01760 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D GYM47_11670 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D GYM47_00880 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D GYM47_08380 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D GYM47_13310 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D GYM47_03100 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D GYM47_11195 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D GYM47_02550 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D GYM47_11930 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D GYM47_00200 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D GYM47_18075 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D GYM47_10585 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D GYM47_10595 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D GYM47_14130 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D GYM47_06030 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D GYM47_04025 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D GYM47_12045 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D GYM47_01715 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D GYM47_07340 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D GYM47_02620 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D GYM47_18180 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D GYM47_05395 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D GYM47_06510 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D GYM47_03195 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D GYM47_10140 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D GYM47_14225 rluB; 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D GYM47_10425 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D GYM47_14805 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D GYM47_05315 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D GYM47_10115 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D GYM47_02540 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D GYM47_06680 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D GYM47_02450 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D GYM47_13655 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D GYM47_09275 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D GYM47_05800 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D GYM47_05290 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D GYM47_10430 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D GYM47_10790 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D GYM47_00220 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D GYM47_12850 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D GYM47_04380 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D GYM47_10955 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D GYM47_03160 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D GYM47_05425 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D GYM47_10910 hflX; GTPase HflX K03665 hflX; GTPase D GYM47_03125 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D GYM47_17495 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D GYM47_01770 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D GYM47_01755 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D GYM47_07335 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D GYM47_05835 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D GYM47_01710 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D GYM47_10775 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D GYM47_05390 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor D GYM47_10750 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D GYM47_05885 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D GYM47_10405 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:hpiz03016] D GYM47_03415 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D GYM47_13290 polynucleotide adenylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D GYM47_05075 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GYM47_09870 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D GYM47_15035 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D GYM47_07495 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D GYM47_09150 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D GYM47_08205 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D GYM47_14280 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D GYM47_02515 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D GYM47_08805 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D GYM47_03665 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D GYM47_08115 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D GYM47_06145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D GYM47_08210 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D GYM47_02860 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D GYM47_03175 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D GYM47_08135 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D GYM47_08140 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D GYM47_01895 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D GYM47_14995 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D GYM47_17080 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D GYM47_11905 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D GYM47_14440 SAM-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D GYM47_17020 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D GYM47_14170 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D GYM47_07600 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D GYM47_01775 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D GYM47_13385 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D GYM47_03210 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GYM47_03125 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D GYM47_10920 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D GYM47_18185 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D GYM47_18080 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D GYM47_14725 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D GYM47_11325 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D GYM47_18195 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D GYM47_10590 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D GYM47_09240 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D GYM47_17910 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D GYM47_05155 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D GYM47_06305 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D GYM47_11900 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D GYM47_00035 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D GYM47_00030 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D GYM47_01835 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D GYM47_12855 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D GYM47_14255 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D GYM47_05060 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D GYM47_09280 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D GYM47_03695 tRNA-dihydrouridine synthase family protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D GYM47_05845 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D GYM47_11105 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D GYM47_11110 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D GYM47_11200 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D GYM47_05375 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D GYM47_02455 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D GYM47_03225 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D GYM47_09350 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D GYM47_17925 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D GYM47_02940 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D GYM47_05305 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D GYM47_14070 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D GYM47_14200 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D GYM47_06520 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D GYM47_08555 dsrH; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D GYM47_08550 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D GYM47_08545 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D GYM47_08560 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D GYM47_03205 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D GYM47_08870 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D GYM47_07895 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D GYM47_03790 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D GYM47_03255 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D GYM47_07920 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D GYM47_04685 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D GYM47_07915 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D GYM47_05500 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D GYM47_10945 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D GYM47_14720 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D GYM47_03250 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D GYM47_02765 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D GYM47_14540 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D GYM47_14135 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D GYM47_13270 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D GYM47_10935 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D GYM47_02945 tcdA; tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D GYM47_12050 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D GYM47_01785 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:hpiz03012] D GYM47_00255 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D GYM47_01765 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D GYM47_08120 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D GYM47_17075 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D GYM47_02685 elongation factor Ts K02357 tsf; elongation factor Ts D GYM47_00930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GYM47_00925 fusA; elongation factor G K02355 fusA; elongation factor G D GYM47_05930 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D GYM47_02695 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D GYM47_05935 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D GYM47_05890 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D GYM47_05335 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D GYM47_10975 efp; elongation factor P K02356 efp; elongation factor P D GYM47_10970 genX; EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D GYM47_10980 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D GYM47_06540 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D GYM47_02510 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D GYM47_08880 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D GYM47_04220 arfA; ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor D GYM47_12550 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:hpiz03110] D GYM47_05330 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D GYM47_14795 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D GYM47_08175 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D GYM47_14295 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D GYM47_10840 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D GYM47_01655 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GYM47_09345 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GYM47_01660 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D GYM47_16660 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein D GYM47_11610 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D GYM47_01650 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D GYM47_15635 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D GYM47_15640 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D GYM47_11615 hslR; ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D GYM47_09340 co-chaperone GroES K04078 groES; chaperonin GroES D GYM47_10190 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D GYM47_01720 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D GYM47_18055 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D GYM47_00195 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D GYM47_17850 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy D GYM47_16510 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D GYM47_08200 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D GYM47_08190 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D GYM47_17045 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D GYM47_15025 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D GYM47_05265 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D GYM47_09910 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D GYM47_15160 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D GYM47_13320 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D GYM47_06160 trxA; thioredoxin K03671 TXN; thioredoxin D GYM47_01990 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D GYM47_08960 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1 D GYM47_06285 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D GYM47_17120 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D GYM47_11585 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D GYM47_02470 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D GYM47_02080 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D GYM47_09260 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D GYM47_17735 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D GYM47_03755 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D GYM47_11700 dsbG; thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG D GYM47_17750 dsbG; thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG D GYM47_02070 dsbG; thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:hpiz04131] D GYM47_03200 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D GYM47_06850 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GYM47_07430 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GYM47_13810 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GYM47_06845 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GYM47_10840 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D GYM47_14385 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system C 03051 Proteasome [BR:hpiz03051] D GYM47_10840 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:hpiz03032] D GYM47_08420 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D GYM47_17430 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D GYM47_08185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GYM47_08145 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D GYM47_06225 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D GYM47_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D GYM47_12020 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D GYM47_13260 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D GYM47_00715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GYM47_02755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GYM47_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GYM47_02890 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D GYM47_07485 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GYM47_10355 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GYM47_13195 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_14075 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08425 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08465 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_09210 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_06290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GYM47_02750 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D GYM47_14575 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D GYM47_00310 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_03780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_07725 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D GYM47_09125 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D GYM47_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D GYM47_11090 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D GYM47_11095 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D GYM47_07395 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D GYM47_09935 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:hpiz03036] D GYM47_15100 FkbM family methyltransferase K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D GYM47_10175 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D GYM47_17430 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D GYM47_08185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GYM47_08145 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D GYM47_06225 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D GYM47_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D GYM47_14530 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D GYM47_09285 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D GYM47_10915 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D GYM47_04110 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D GYM47_13435 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYM47_05940 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYM47_15145 nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein D GYM47_03770 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D GYM47_14235 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D GYM47_14230 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D GYM47_10525 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D GYM47_13400 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D GYM47_02560 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D GYM47_10575 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D GYM47_05350 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D GYM47_10580 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D GYM47_10530 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D GYM47_10550 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D GYM47_02565 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D GYM47_10520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D GYM47_03775 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D GYM47_00150 cell division protein ZapA K09888 zapA; cell division protein ZapA D GYM47_02545 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB D GYM47_10655 cell division protein ZapE K06916 zapE; cell division protein ZapE D GYM47_10930 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D GYM47_13125 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_05995 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_02390 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D GYM47_02395 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D GYM47_02400 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D GYM47_02575 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D GYM47_10810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GYM47_10805 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D GYM47_10800 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D GYM47_07350 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D GYM47_18070 ParA family protein K03496 parA; chromosome partitioning protein D GYM47_18065 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GYM47_11090 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D GYM47_11095 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D GYM47_18080 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D GYM47_18075 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D GYM47_17140 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D GYM47_02465 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D GYM47_07700 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D GYM47_17130 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:hpiz03400] D GYM47_15785 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D GYM47_00775 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D GYM47_07795 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D GYM47_03455 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D GYM47_14670 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D GYM47_09190 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D GYM47_01310 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D GYM47_15650 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GYM47_10275 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GYM47_10495 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GYM47_02590 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D GYM47_07130 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D GYM47_12000 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D GYM47_17525 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D GYM47_15615 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D GYM47_02615 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D GYM47_17915 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D GYM47_10235 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D GYM47_09850 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D GYM47_04385 nfi; deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D GYM47_02485 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D GYM47_00310 ligB; NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_03780 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D GYM47_14575 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D GYM47_00705 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D GYM47_08855 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D GYM47_06265 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D GYM47_17350 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GYM47_10335 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D GYM47_00905 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D GYM47_00910 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D GYM47_01065 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D GYM47_17500 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D GYM47_07425 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D GYM47_03645 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D GYM47_10925 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D GYM47_02405 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D GYM47_03855 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D GYM47_16645 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D GYM47_02755 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D GYM47_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D GYM47_02890 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D GYM47_07485 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D GYM47_10355 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D GYM47_13195 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_14075 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08425 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_08465 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_09210 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D GYM47_06290 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D GYM47_00715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GYM47_12285 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D GYM47_02330 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D GYM47_12265 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D GYM47_02335 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D GYM47_12290 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D GYM47_01445 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D GYM47_02325 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D GYM47_03655 recA; recombinase RecA K03553 recA; recombination protein RecA D GYM47_08795 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D GYM47_08790 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D GYM47_08800 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D GYM47_14275 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D GYM47_12960 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D GYM47_02385 DUF349 domain-containing protein K03546 sbcC; DNA repair protein SbcC/Rad50 D GYM47_12965 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D GYM47_14730 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D GYM47_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D GYM47_17475 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D GYM47_09675 AAA family ATPase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D GYM47_10165 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D GYM47_06300 recR; recombination protein RecR K06187 recR; recombination protein RecR D GYM47_01645 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D GYM47_09135 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D GYM47_14240 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD D GYM47_09125 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D GYM47_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D GYM47_07395 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D GYM47_17430 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D GYM47_08185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D GYM47_09285 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D GYM47_08145 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D GYM47_06225 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D GYM47_15250 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D GYM47_03465 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D GYM47_17575 Y-family DNA polymerase K03502 umuC; DNA polymerase V D GYM47_01400 Y-family DNA polymerase K03502 umuC; DNA polymerase V D GYM47_05770 Y-family DNA polymerase K03502 umuC; DNA polymerase V D GYM47_17580 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D GYM47_01405 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D GYM47_05775 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D GYM47_03720 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D GYM47_07840 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D GYM47_03660 regulatory protein RecX K03565 recX; regulatory protein D GYM47_17930 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D GYM47_10220 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D GYM47_00690 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GYM47_10285 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GYM47_10280 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:hpiz03029] D GYM47_10635 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D GYM47_01765 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D GYM47_08120 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D GYM47_02685 elongation factor Ts K02357 tsf; elongation factor Ts D GYM47_00930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GYM47_00925 fusA; elongation factor G K02355 fusA; elongation factor G D GYM47_10170 GTPase Era K03595 era; GTPase D GYM47_01895 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D GYM47_07495 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D GYM47_08805 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D GYM47_14280 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D GYM47_15690 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D GYM47_10820 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D GYM47_10825 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D GYM47_10815 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D GYM47_12070 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D GYM47_00715 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GYM47_02720 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D GYM47_01655 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GYM47_01650 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D GYM47_09345 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GYM47_09340 co-chaperone GroES K04078 groES; chaperonin GroES D GYM47_01660 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D GYM47_03210 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D GYM47_06285 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D GYM47_07700 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D GYM47_04510 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D GYM47_08080 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D GYM47_08100 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D GYM47_18190 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GYM47_08095 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D GYM47_17035 SCO family protein K07152 SCO1; protein SCO1 D GYM47_10840 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:hpiz02000] D GYM47_10460 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D GYM47_12835 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D GYM47_13095 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D GYM47_16145 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D GYM47_04250 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D GYM47_11865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D GYM47_02870 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D GYM47_07995 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D GYM47_07990 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D GYM47_04115 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D GYM47_06585 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D GYM47_06080 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D GYM47_06075 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D GYM47_06070 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D GYM47_06065 cysA; sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D GYM47_13805 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D GYM47_13800 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D GYM47_13795 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D GYM47_11145 solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein D GYM47_11135 ABC transporter permease subunit K05773 tupB; tungstate transport system permease protein D GYM47_11140 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D GYM47_05000 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D GYM47_04995 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D GYM47_04990 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D GYM47_14570 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GYM47_15300 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GYM47_16205 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D GYM47_14560 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D GYM47_15305 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D GYM47_14565 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D GYM47_15310 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D GYM47_05960 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D GYM47_05975 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D GYM47_05970 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D GYM47_05965 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D GYM47_12145 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D GYM47_13185 glycine betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D GYM47_09740 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D GYM47_13180 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D GYM47_13175 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D GYM47_08215 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D GYM47_08220 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D GYM47_08230 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D GYM47_08225 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D GYM47_08470 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein D GYM47_02850 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein D GYM47_02845 ABC transporter permease subunit K05778 ynjC; putative thiamine transport system permease protein D GYM47_02840 ATP-binding cassette domain-containing protein K05779 ynjD; putative thiamine transport system ATP-binding protein D GYM47_16585 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D GYM47_10985 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D GYM47_16575 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D GYM47_10990 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D GYM47_16580 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D GYM47_10995 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D GYM47_06950 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D GYM47_06945 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D GYM47_06940 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D GYM47_04950 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GYM47_06860 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GYM47_06900 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GYM47_05190 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D GYM47_05175 carbohydrate ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D GYM47_05180 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D GYM47_05185 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D GYM47_04440 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D GYM47_06880 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D GYM47_06875 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D GYM47_06870 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D GYM47_09790 carbohydrate ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D GYM47_09775 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein D GYM47_09780 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein D GYM47_09765 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D GYM47_09770 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D GYM47_15235 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D GYM47_01260 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D GYM47_15240 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D GYM47_01255 ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D GYM47_15245 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D GYM47_01250 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D GYM47_15230 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D GYM47_01245 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D GYM47_04935 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D GYM47_04940 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D GYM47_04945 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D GYM47_08260 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GYM47_10705 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D GYM47_08270 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GYM47_10710 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D GYM47_08265 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GYM47_10715 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D GYM47_08255 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D GYM47_10700 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D GYM47_10695 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D GYM47_17365 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D GYM47_06410 phosphonate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D GYM47_17370 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D GYM47_06415 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D GYM47_17375 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D GYM47_06420 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D GYM47_17380 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D GYM47_06425 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D GYM47_16730 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D GYM47_01500 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D GYM47_16740 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D GYM47_16745 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D GYM47_01510 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D GYM47_01515 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D GYM47_16735 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D GYM47_18095 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein D GYM47_18090 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein D GYM47_18085 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D GYM47_16695 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D GYM47_16700 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D GYM47_16705 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D GYM47_16710 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D GYM47_16715 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D GYM47_12210 transporter substrate-binding domain-containing protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D GYM47_12215 transporter substrate-binding domain-containing protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D GYM47_12205 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D GYM47_12200 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D GYM47_12195 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D GYM47_16250 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_00810 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_06555 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_10030 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D GYM47_16245 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_00820 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_10025 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D GYM47_00815 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GYM47_10020 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D GYM47_16235 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_00830 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_10040 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D GYM47_16230 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_00825 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_10035 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D GYM47_07760 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D GYM47_07765 ABC transporter permease K02072 metI; D-methionine transport system permease protein D GYM47_07770 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D GYM47_16540 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D GYM47_16535 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D GYM47_16530 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D GYM47_16525 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D GYM47_16520 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D GYM47_15065 amino acid ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein D GYM47_15060 amino acid ABC transporter permease K16962 yxeN; putative S-methylcysteine transport system permease protein D GYM47_15055 amino acid ABC transporter ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein D GYM47_13840 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GYM47_14390 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GYM47_14395 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D GYM47_13830 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D GYM47_13835 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D GYM47_13825 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D GYM47_01590 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_03345 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_05255 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_07280 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_11150 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D GYM47_01585 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D GYM47_03340 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D GYM47_05250 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D GYM47_07275 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D GYM47_01580 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GYM47_03335 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GYM47_05245 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GYM47_07270 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D GYM47_01575 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GYM47_03330 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GYM47_05240 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GYM47_07265 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D GYM47_07260 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D GYM47_08400 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D GYM47_08395 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D GYM47_08390 ABC transporter permease K13895 yejE; microcin C transport system permease protein D GYM47_08385 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D GYM47_16800 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D GYM47_04135 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D GYM47_04125 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D GYM47_13115 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D GYM47_13110 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D GYM47_13105 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D GYM47_13100 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D GYM47_13020 iron-siderophore ABC transporter substrate-binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein D GYM47_13025 iron ABC transporter permease K25110 sirB; iron-siderophore transport system permease protein D GYM47_13030 iron ABC transporter permease K25111 sirC; iron-siderophore transport system permease protein D GYM47_13070 ABC transporter ATP-binding protein K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D GYM47_15545 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D GYM47_01680 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D GYM47_07035 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D GYM47_01675 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D GYM47_07040 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D GYM47_01670 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D GYM47_07045 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D GYM47_03485 zinc ABC transporter solute-binding protein K09815 znuA; zinc transport system substrate-binding protein D GYM47_03520 metal-binding protein ZinT K09815 znuA; zinc transport system substrate-binding protein D GYM47_03495 hypothetical protein K09816 znuB; zinc transport system permease protein D GYM47_03490 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D GYM47_06100 zinc ABC transporter solute-binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein D GYM47_09400 zinc ABC transporter substrate-binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein D GYM47_09390 metal ABC transporter permease K09819 ABC.MN.P; manganese/iron transport system permease protein D GYM47_09395 metal ABC transporter ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein D GYM47_01135 zinc ABC transporter solute-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D GYM47_01140 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D GYM47_01145 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D GYM47_11445 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D GYM47_11440 chain-length determining protein K10107 kpsE; capsular polysaccharide transport system permease protein D GYM47_11425 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D GYM47_02905 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D GYM47_02910 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D GYM47_10740 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D GYM47_10480 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D GYM47_10475 ATP-binding cassette domain-containing protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D GYM47_03740 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D GYM47_03735 heme ABC transporter permease K02195 ccmC; heme exporter protein C D GYM47_03730 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D GYM47_03725 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D GYM47_02565 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D GYM47_02560 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D GYM47_15150 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D GYM47_05495 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D GYM47_15155 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D GYM47_05490 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D GYM47_11765 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D GYM47_08510 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D GYM47_11770 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GYM47_08515 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D GYM47_06650 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D GYM47_12975 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D GYM47_16350 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D GYM47_06535 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D GYM47_08620 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D GYM47_14460 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D GYM47_07665 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D GYM47_12570 MFS transporter K08175 NAGLT1; MFS transporter, FHS family, Na+ dependent glucose transporter 1 D GYM47_07945 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D GYM47_06435 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D GYM47_04330 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D GYM47_09915 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D GYM47_06400 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D GYM47_17520 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D GYM47_02525 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D GYM47_05230 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D GYM47_14385 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D GYM47_11545 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D GYM47_10765 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D GYM47_06830 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D GYM47_06820 PTS fructose-like transporter subunit IIB K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D GYM47_10755 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D GYM47_03810 ion transporter K10716 kch; voltage-gated potassium channel D GYM47_11045 ion transporter K08714 VGSC; voltage-gated sodium channel D GYM47_16775 ammonium transporter K03320 amt; ammonium transporter, Amt family D GYM47_08895 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D GYM47_12330 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_16665 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_01560 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_04795 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_10000 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D GYM47_10625 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D GYM47_08540 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D GYM47_17195 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D GYM47_06025 mscK; mechanosensitive channel MscK K05802 mscK; potassium-dependent mechanosensitive channel D GYM47_12815 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D GYM47_16610 ybiO; mechanosensitive channel protein K22044 ybiO; moderate conductance mechanosensitive channel D GYM47_04410 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel D GYM47_15990 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D GYM47_18015 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D GYM47_00585 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GYM47_00670 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GYM47_11735 OmpA family protein K02557 motB; chemotaxis protein MotB D GYM47_00590 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D GYM47_00675 OmpA family protein K02557 motB; chemotaxis protein MotB D GYM47_10260 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D GYM47_10265 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D GYM47_10255 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D GYM47_08780 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D GYM47_08775 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D GYM47_12575 magnesium transporter CorA family protein K03284 corA; magnesium transporter D GYM47_13450 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D GYM47_13455 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D GYM47_16850 merT; mercuric ion transporter MerT K08363 merT; mercuric ion transport protein D GYM47_16845 merP; mercury resistance system periplasmic binding protein MerP K08364 merP; periplasmic mercuric ion binding protein D GYM47_16835 merF; mercury resistance system transport protein MerF K19058 merC; mercuric ion transport protein D GYM47_13495 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D GYM47_02430 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D GYM47_01235 porin K11929 phoE; outer membrane pore protein E D GYM47_06885 carbohydrate porin K16077 scrY; sucrose porin D GYM47_08110 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D GYM47_02505 transporter K06076 fadL; long-chain fatty acid transport protein D GYM47_07030 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D GYM47_13120 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D GYM47_13135 ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D GYM47_13590 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D GYM47_13065 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D GYM47_13080 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D GYM47_16795 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D GYM47_04055 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D GYM47_04825 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D GYM47_05010 TolC family outer membrane protein K12340 tolC; outer membrane protein D GYM47_11870 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D GYM47_02875 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D GYM47_02720 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D GYM47_03165 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D GYM47_14180 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D GYM47_14810 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D GYM47_01635 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D GYM47_08725 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D GYM47_08720 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D GYM47_03265 calcium-binding protein K21449 ata; trimeric autotransporter adhesin D GYM47_10735 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D GYM47_10730 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D GYM47_13325 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein D GYM47_07490 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D GYM47_05830 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D GYM47_00295 CidA/LrgA family protein K06518 cidA; holin-like protein D GYM47_03010 eat; ethanolamine permease K16238 eat; ethanolamine permease D GYM47_16870 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D GYM47_13475 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D GYM47_16885 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family D GYM47_05020 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GYM47_05990 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GYM47_11575 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump D GYM47_09435 multidrug efflux RND transporter permease subunit K19585 oqxB; multidrug efflux pump D GYM47_14435 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump D GYM47_13785 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D GYM47_13640 DMT family transporter K03298 TC.DME; drug/metabolite transporter, DME family D GYM47_08370 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D GYM47_09355 TRAP transporter large permease subunit K07084 yuiF; putative amino acid transporter D GYM47_13905 L-lactate permease K03303 lutP; lactate permease D GYM47_14405 BCCT family transporter K05020 opuD; glycine betaine transporter D GYM47_16590 BCCT family transporter K05020 opuD; glycine betaine transporter D GYM47_13715 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D GYM47_01605 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D GYM47_07975 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D GYM47_14090 cation acetate symporter K14393 actP; cation/acetate symporter D GYM47_12995 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D GYM47_08475 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D GYM47_10090 potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D GYM47_03085 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D GYM47_06935 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D GYM47_03090 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D GYM47_06920 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D GYM47_07805 uracil-xanthine permease K02824 uraA; uracil permease D GYM47_07670 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D GYM47_07780 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D GYM47_16225 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D GYM47_16270 benzoate transporter K05782 benE; benzoate membrane transport protein D GYM47_09860 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D GYM47_15750 anion permease K11106 ttdT; L-tartrate/succinate antiporter D GYM47_18110 chloride channel protein K03281 clcA; chloride channel protein, CIC family D GYM47_12255 chrA; chromate efflux transporter K07240 chrA; chromate transporter D GYM47_04275 chromate transporter K07240 chrA; chromate transporter D GYM47_04280 chromate transporter K07240 chrA; chromate transporter D GYM47_09525 chrA; chromate efflux transporter K07240 chrA; chromate transporter D GYM47_13465 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D GYM47_02095 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D GYM47_08360 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family D GYM47_13940 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D GYM47_13770 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_15350 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_15915 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_16020 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_16375 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_17055 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D GYM47_12635 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein D GYM47_17275 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein D GYM47_04860 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein D GYM47_15190 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein D GYM47_04855 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein D GYM47_12645 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_13780 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_13945 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_15195 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_15925 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_16030 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_16365 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_17065 C4-dicarboxylate ABC transporter K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_17220 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_17265 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_03290 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_04850 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D GYM47_13460 arsenic resistance protein K03325 ACR3; arsenite transporter D GYM47_06455 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D GYM47_11050 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D GYM47_11055 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D GYM47_11060 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D GYM47_11065 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D GYM47_11070 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D GYM47_11075 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D GYM47_11990 putative monovalent cation/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D GYM47_11985 Na+/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D GYM47_11980 Na+/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D GYM47_11975 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D GYM47_12895 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D GYM47_11970 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D GYM47_11965 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D GYM47_11960 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D GYM47_15045 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D GYM47_17025 AEC family transporter K13936 mdcF; malonate transporter and related proteins D GYM47_17290 AEC family transporter K13936 mdcF; malonate transporter and related proteins D GYM47_13145 AEC family transporter K24180 mleP; malate permease and related proteins D GYM47_14415 AEC family transporter K24180 mleP; malate permease and related proteins D GYM47_00315 AEC family transporter K24180 mleP; malate permease and related proteins D GYM47_11260 AEC family transporter K24180 mleP; malate permease and related proteins D GYM47_04140 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D GYM47_07305 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D GYM47_12800 LysE family translocator K05835 rhtC; threonine efflux protein D GYM47_13005 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D GYM47_13010 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D GYM47_16180 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_16545 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_17300 C4-dicarboxylate ABC transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_04260 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_07175 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D GYM47_16185 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D GYM47_16550 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D GYM47_17305 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D GYM47_04265 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D GYM47_17310 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D GYM47_16190 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D GYM47_16555 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein D GYM47_07170 tricarboxylate transporter K07795 tctC; putative tricarboxylic transport membrane protein D GYM47_14195 AI-2E family transporter K03548 perM; putative permease D GYM47_08455 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter D GYM47_12420 VIT family protein K22736 VIT; vacuolar iron transporter family protein D GYM47_10550 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D GYM47_04670 manganese efflux pump K23242 mntP; manganese efflux pump family protein D GYM47_14505 nickel/cobalt transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D GYM47_10250 TonB family protein K03832 tonB; periplasmic protein TonB D GYM47_08760 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D GYM47_08770 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D GYM47_08765 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D GYM47_03710 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D GYM47_03705 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D GYM47_03700 sodium pump decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D GYM47_17690 cytochrome C biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D GYM47_17780 cytochrome C biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D GYM47_11860 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D GYM47_02865 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D GYM47_13125 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_05995 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_11570 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system D GYM47_09430 efflux RND transporter periplasmic adaptor subunit K19586 oqxA; membrane fusion protein, multidrug efflux system D GYM47_15840 tryptophan-rich sensory protein K05770 TSPO; translocator protein D GYM47_14495 entericidin A/B family lipoprotein K16348 ecnB; entericidin B D GYM47_01220 entericidin A/B family lipoprotein K16348 ecnB; entericidin B D GYM47_03750 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D GYM47_13880 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D GYM47_17840 copper resistance protein CopD K07245 pcoD; copper resistance protein D D GYM47_17845 copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:hpiz02044] D GYM47_05010 TolC family outer membrane protein K12340 tolC; outer membrane protein D GYM47_11865 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D GYM47_02870 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D GYM47_11860 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D GYM47_02865 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D GYM47_11870 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D GYM47_02875 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system D GYM47_09065 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D GYM47_09050 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D GYM47_09055 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D GYM47_09060 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D GYM47_15015 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D GYM47_03190 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D GYM47_03580 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D GYM47_03585 fimbrial assembly protein K02663 pilN; type IV pilus assembly protein PilN D GYM47_03590 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D GYM47_03595 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D GYM47_03600 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D GYM47_01885 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D GYM47_15010 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D GYM47_16080 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D GYM47_16085 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D GYM47_15000 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D GYM47_16090 pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D GYM47_16095 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D GYM47_10350 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D GYM47_16075 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D GYM47_14840 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D GYM47_07595 hypothetical protein K08086 fimV; pilus assembly protein FimV D GYM47_01870 YggT family protein K02221 yggT; YggT family protein D GYM47_06205 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA D GYM47_10465 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D GYM47_00645 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D GYM47_00640 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D GYM47_00565 flagellar hook-length control protein FliK K04061 flhB2; flagellar biosynthesis protein D GYM47_00570 flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein D GYM47_00535 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D GYM47_00525 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D GYM47_00520 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D GYM47_00495 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D GYM47_00490 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D GYM47_00485 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D GYM47_00480 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D GYM47_00475 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D GYM47_02470 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D GYM47_14920 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D GYM47_14945 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK D GYM47_14950 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D GYM47_14965 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D GYM47_14970 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG D GYM47_14980 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D GYM47_14985 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D GYM47_14990 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D GYM47_12665 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D GYM47_14895 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D GYM47_14975 tssE; type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein D GYM47_14955 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D GYM47_14940 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D GYM47_14925 tssA; type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ D GYM47_14960 tagH; type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI D GYM47_14930 tagO; type VI secretion system-associated protein TagO K11909 vasI; type VI secretion system protein VasI D GYM47_16125 hypothetical protein K04335 csgB; minor curlin subunit D GYM47_16130 hypothetical protein K04335 csgB; minor curlin subunit D GYM47_18140 hypothetical protein K04335 csgB; minor curlin subunit D GYM47_18155 curli production assembly protein CsgE K04337 csgE; curli production assembly/transport component CsgE D GYM47_16140 hypothetical protein K04338 csgF; curli production assembly/transport component CsgF D GYM47_18150 curli production assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF D GYM47_16135 curli production assembly protein CsgG K06214 csgG; curli production assembly/transport component CsgG D GYM47_18145 curli production assembly/transport protein CsgG K06214 csgG; curli production assembly/transport component CsgG D GYM47_10505 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D GYM47_00195 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D GYM47_03240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D GYM47_00875 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D GYM47_03235 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D GYM47_01740 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D GYM47_01040 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D GYM47_02440 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D GYM47_02555 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D GYM47_03245 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D GYM47_18190 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D GYM47_14325 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D GYM47_14330 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D GYM47_14335 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:hpiz02042] D GYM47_13495 DUF21 domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D GYM47_02430 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:hpiz02022] D GYM47_17405 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D GYM47_17410 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D GYM47_14365 HAMP domain-containing protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D GYM47_14370 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D GYM47_13695 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D GYM47_13700 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D GYM47_17975 HAMP domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D GYM47_02065 HAMP domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D GYM47_17970 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D GYM47_02060 response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D GYM47_06930 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D GYM47_06925 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D GYM47_16200 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D GYM47_16195 response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D GYM47_13585 response regulator transcription factor K19610 pfeR; two-component system, OmpR family, response regulator PfeR D GYM47_17830 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D GYM47_01480 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D GYM47_05165 response regulator K02483 K02483; two-component system, OmpR family, response regulator D GYM47_11855 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D GYM47_10150 response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D GYM47_06270 uvrY; UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D GYM47_16560 response regulator K11638 K11638; two-component system, CitB family, response regulator CitT D GYM47_16565 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D GYM47_01195 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D GYM47_01200 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D GYM47_00370 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D GYM47_00365 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D GYM47_13155 HAMP domain-containing histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D GYM47_15405 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_00595 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_00630 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GYM47_15395 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GYM47_00620 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GYM47_06330 EAL domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D GYM47_08940 HAMP domain-containing histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D GYM47_08945 response regulator transcription factor K15012 regA; two-component system, response regulator RegA D GYM47_13730 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:hpiz02035] D GYM47_15405 hybrid sensor histidine kinase/response regulator K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_00595 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D GYM47_15420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GYM47_00600 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D GYM47_15400 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GYM47_00615 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D GYM47_15395 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GYM47_00620 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D GYM47_06330 EAL domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D GYM47_00630 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D GYM47_00635 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D GYM47_11720 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_14815 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_15390 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_16460 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_16755 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_05485 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_08365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D GYM47_12475 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_00605 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_00625 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_01315 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_04300 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_06395 HAMP domain-containing protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D GYM47_15280 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_00610 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_11205 PAS domain-containing protein K03776 aer; aerotaxis receptor D GYM47_11640 PAS domain S-box protein K03776 aer; aerotaxis receptor D GYM47_00525 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D GYM47_00520 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D GYM47_00515 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D GYM47_00490 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D GYM47_00485 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D GYM47_00480 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D GYM47_00475 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D GYM47_00645 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D GYM47_00640 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D GYM47_00660 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D GYM47_00530 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D GYM47_00500 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D GYM47_00495 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D GYM47_00535 fliF; flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D GYM47_00455 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D GYM47_00415 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D GYM47_00450 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D GYM47_00505 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D GYM47_00540 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D GYM47_00510 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D GYM47_00420 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D GYM47_00425 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D GYM47_00430 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D GYM47_00440 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D GYM47_00445 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D GYM47_00460 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D GYM47_00435 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D GYM47_00465 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D GYM47_00470 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D GYM47_00405 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D GYM47_15105 flagellin FliC K02406 fliC; flagellin D GYM47_16595 flagellin FliC K02406 fliC; flagellin D GYM47_15110 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D GYM47_15115 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D GYM47_00555 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D GYM47_00560 flagellar protein FliT K02423 fliT; flagellar protein FliT D GYM47_00575 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D GYM47_00580 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D GYM47_00665 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D GYM47_00585 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D GYM47_00670 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA D GYM47_11735 OmpA family protein K02557 motB; chemotaxis protein MotB D GYM47_00590 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D GYM47_00675 OmpA family protein K02557 motB; chemotaxis protein MotB D GYM47_00410 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D GYM47_00545 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D GYM47_00650 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D GYM47_01885 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D GYM47_09050 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D GYM47_09055 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D GYM47_09060 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D GYM47_09065 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D GYM47_03190 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D GYM47_03600 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D GYM47_03595 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D GYM47_03590 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D GYM47_03585 fimbrial assembly protein K02663 pilN; type IV pilus assembly protein PilN D GYM47_03580 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D GYM47_10350 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D GYM47_15010 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D GYM47_16080 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D GYM47_16085 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D GYM47_15000 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D GYM47_16090 pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D GYM47_16095 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D GYM47_15015 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins [BR:hpiz03037] C 04812 Cytoskeleton proteins [BR:hpiz04812] D GYM47_10810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GYM47_10520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D GYM47_10525 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D GYM47_02390 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D GYM47_02395 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D GYM47_02400 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D GYM47_18070 ParA family protein K03496 parA; chromosome partitioning protein D GYM47_18065 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:hpiz04147] D GYM47_10840 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D GYM47_03635 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D GYM47_06850 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GYM47_07430 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D GYM47_00280 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D GYM47_13810 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GYM47_06845 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D GYM47_05670 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D GYM47_09345 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D GYM47_01655 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D GYM47_06815 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_11100 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D GYM47_03860 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D GYM47_00930 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D GYM47_11905 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D GYM47_17950 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_06360 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_08295 acyl--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D GYM47_01795 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06465 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_06570 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D GYM47_14140 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D GYM47_07785 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D GYM47_17165 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D GYM47_09235 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D GYM47_15530 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D GYM47_09805 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D GYM47_01185 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D GYM47_14345 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D GYM47_07680 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D GYM47_16415 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GYM47_16640 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D GYM47_09290 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D GYM47_05130 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D GYM47_08315 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D GYM47_10305 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D GYM47_06955 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D GYM47_01735 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D GYM47_12165 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:hpiz02048] D GYM47_09460 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2 D GYM47_09455 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D GYM47_09450 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D GYM47_01430 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D GYM47_03885 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D GYM47_01425 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D GYM47_03880 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D GYM47_01420 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D GYM47_03875 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D GYM47_16805 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] D GYM47_16810 type II toxin-antitoxin system PrlF family antitoxin K19156 prlF; antitoxin PrlF D GYM47_04620 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D GYM47_04625 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D GYM47_03405 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB D GYM47_03400 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA D GYM47_03410 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA D GYM47_04600 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D GYM47_07545 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D GYM47_03425 antitoxin K18829 mvpT; antitoxin VapB D GYM47_10520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D GYM47_10810 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D GYM47_11090 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D GYM47_11095 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D GYM47_05075 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D GYM47_06230 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D GYM47_03210 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:hpiz01504] D GYM47_15165 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D GYM47_04665 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D GYM47_13125 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_05995 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D GYM47_05020 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GYM47_05990 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D GYM47_15900 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D GYM47_17760 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D GYM47_05010 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hpiz00537] D GYM47_05670 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:hpiz03100] D GYM47_08015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GYM47_14755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GYM47_05080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GYM47_06275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D GYM47_03685 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GYM47_03690 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GYM47_08910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D GYM47_05850 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D GYM47_05855 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D GYM47_05860 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D GYM47_13985 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D GYM47_13995 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D GYM47_14000 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D GYM47_06250 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D GYM47_05905 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D GYM47_14655 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D GYM47_05085 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GYM47_05455 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GYM47_05465 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GYM47_05475 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D GYM47_00860 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_05460 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_05470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_05480 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_06255 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D GYM47_08900 tRNA-His K14226 tRNA-His; tRNA His D GYM47_08905 tRNA-His K14226 tRNA-His; tRNA His D GYM47_08010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D GYM47_14760 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D GYM47_12055 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_12060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_12065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_01745 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_06245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_09315 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D GYM47_14215 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D GYM47_14220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D GYM47_01750 tRNA-Met K14230 tRNA-Met; tRNA Met D GYM47_02375 tRNA-Met K14230 tRNA-Met; tRNA Met D GYM47_09735 tRNA-Met K14230 tRNA-Met; tRNA Met D GYM47_13085 tRNA-Ile K14230 tRNA-Met; tRNA Met D GYM47_05880 tRNA-Met K14230 tRNA-Met; tRNA Met D GYM47_14660 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D GYM47_01320 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GYM47_09035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GYM47_08915 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D GYM47_05515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GYM47_08480 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GYM47_03680 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D GYM47_00865 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GYM47_14650 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D GYM47_00870 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D GYM47_00855 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D GYM47_07745 tRNA-Val K14237 tRNA-Val; tRNA Val D GYM47_07750 tRNA-Val K14237 tRNA-Val; tRNA Val D GYM47_13990 tRNA-Val K14237 tRNA-Val; tRNA Val D GYM47_14005 tRNA-Val K14237 tRNA-Val; tRNA Val D GYM47_00230 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D GYM47_00235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D GYM47_10590 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D GYM47_15565 3-hydroxyacyl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D GYM47_15930 SDR family oxidoreductase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410] D GYM47_15950 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D GYM47_12425 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D GYM47_13150 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D GYM47_13410 aldehyde dehydrogenase family protein K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D GYM47_06430 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D GYM47_12105 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D GYM47_17540 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D GYM47_17535 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D GYM47_10315 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D GYM47_00785 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D GYM47_09840 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D GYM47_12125 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D GYM47_05950 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D GYM47_12940 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D GYM47_08715 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D GYM47_05430 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D GYM47_11600 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D GYM47_13895 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D GYM47_04835 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D GYM47_04365 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D GYM47_04000 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D GYM47_14625 catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D GYM47_04190 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D GYM47_14190 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D GYM47_04395 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D GYM47_13490 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D GYM47_05955 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D GYM47_04840 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D GYM47_04885 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D GYM47_16635 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D GYM47_17545 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D GYM47_16830 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D GYM47_16765 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D GYM47_06450 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D GYM47_12890 hypothetical protein K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D GYM47_13375 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D GYM47_00750 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D GYM47_06370 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D GYM47_16905 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D GYM47_17675 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D GYM47_05825 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D GYM47_04655 GNAT family N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D GYM47_14165 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D GYM47_05345 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D GYM47_05340 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D GYM47_11695 sugar phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D GYM47_11470 glycosyltransferase family 4 protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D GYM47_03070 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D GYM47_13535 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D GYM47_17730 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D GYM47_11525 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D GYM47_18000 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D GYM47_09550 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D GYM47_15945 four-carbon acid sugar kinase family protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D GYM47_07865 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D GYM47_14420 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D GYM47_16515 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D GYM47_00050 sulfatase-like hydrolase/transferase K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D GYM47_03020 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D GYM47_16445 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D GYM47_11915 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D GYM47_01965 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D GYM47_02625 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D GYM47_03800 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D GYM47_10830 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D GYM47_06550 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D GYM47_08875 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D GYM47_10345 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D GYM47_08460 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D GYM47_14905 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D GYM47_01075 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D GYM47_03110 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D GYM47_16720 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D GYM47_07180 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D GYM47_03815 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D GYM47_10410 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D GYM47_15940 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D GYM47_10940 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D GYM47_15935 hydroxypyruvate isomerase family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D GYM47_07295 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D GYM47_09175 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D GYM47_09170 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D GYM47_09165 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D GYM47_07435 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D GYM47_07440 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D GYM47_07445 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D GYM47_07450 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D GYM47_07455 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D GYM47_07460 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D GYM47_14045 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D GYM47_06790 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D GYM47_16895 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D GYM47_02120 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D GYM47_01850 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D GYM47_15485 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D GYM47_16405 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D GYM47_03640 ferredoxin family protein K05524 fdxA; ferredoxin D GYM47_09180 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D GYM47_09185 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D GYM47_09160 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D GYM47_08310 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D GYM47_10310 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D GYM47_03095 dodecin domain-containing protein K09165 K09165; dodecin C 99983 Lipid metabolism C 99984 Nucleotide metabolism D GYM47_10290 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D GYM47_17390 cysZ; sulfate transporter CysZ K06203 cysZ; CysZ protein D GYM47_01880 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D GYM47_06220 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A D GYM47_06215 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B D GYM47_05145 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein D GYM47_11315 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D GYM47_17190 tetratricopeptide repeat protein K02498 hemY; HemY protein D GYM47_14315 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D GYM47_14310 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D GYM47_16785 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D GYM47_07810 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D GYM47_13250 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein D GYM47_16170 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D GYM47_16945 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D GYM47_13045 siderophore biosynthesis protein SbnG K23376 sbnG; staphyloferrin B biosynthesis citrate synthase C 99999 Others D GYM47_01090 DoxX family protein K15977 K15977; putative oxidoreductase D GYM47_12910 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase D GYM47_08575 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D GYM47_12920 cold-shock protein K03704 cspA; cold shock protein D GYM47_02640 cold shock domain-containing protein K03704 cspA; cold shock protein D GYM47_04030 cold-shock protein K03704 cspA; cold shock protein D GYM47_10860 cold-shock protein K03704 cspA; cold shock protein D GYM47_11580 rsd; sigma D regulator K07740 rsd; regulator of sigma D D GYM47_16770 glnK; P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D GYM47_16780 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D GYM47_11595 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D GYM47_11435 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D GYM47_14640 META domain-containing protein K03668 hslJ; heat shock protein HslJ D GYM47_02815 META domain-containing protein K03668 hslJ; heat shock protein HslJ D GYM47_05325 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D GYM47_08165 tig; trigger factor K03545 tig; trigger factor D GYM47_03995 msrQ; protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D GYM47_16475 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D GYM47_16470 urease accessory protein UreF K03188 ureF; urease accessory protein D GYM47_16465 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D GYM47_16495 urease accessory protein UreD K03190 ureD; urease accessory protein D GYM47_01620 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D GYM47_10295 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D GYM47_04910 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D GYM47_13340 OsmC family protein K07397 yhfA; putative redox protein D GYM47_08860 OsmC family protein K07397 yhfA; putative redox protein D GYM47_08630 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D GYM47_11880 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein D GYM47_16980 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor D GYM47_17530 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor D GYM47_08035 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D GYM47_12120 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D GYM47_02295 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase D GYM47_05585 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase D GYM47_17610 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D GYM47_02600 JAB domain-containing protein K03630 radC; DNA repair protein RadC D GYM47_05530 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D GYM47_02245 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D GYM47_10605 YraN family protein K07460 yraN; putative endonuclease D GYM47_01290 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D GYM47_03120 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D GYM47_05360 replication-associated recombination protein A K07478 ycaJ; putative ATPase D GYM47_17635 IS5 family transposase K07481 K07481; transposase, IS5 family D GYM47_07520 IS5 family transposase K07481 K07481; transposase, IS5 family D GYM47_09445 IS5 family transposase K07481 K07481; transposase, IS5 family D GYM47_09710 IS5 family transposase K07481 K07481; transposase, IS5 family D GYM47_02160 ISL3 family transposase K07485 K07485; transposase D GYM47_02235 ISL3 family transposase K07485 K07485; transposase D GYM47_09725 ISL3 family transposase K07485 K07485; transposase D GYM47_11320 transposase K07491 rayT; REP-associated tyrosine transposase D GYM47_12345 IS3 family transposase K07497 K07497; putative transposase D GYM47_14615 IS3 family transposase K07497 K07497; putative transposase D GYM47_16930 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase D GYM47_17740 IS3 family transposase K07497 K07497; putative transposase D GYM47_17770 IS3 family transposase K07497 K07497; putative transposase D GYM47_17800 IS3 family transposase K07497 K07497; putative transposase D GYM47_02000 IS3 family transposase K07497 K07497; putative transposase D GYM47_02050 hypothetical protein K07497 K07497; putative transposase D GYM47_02165 IS3 family transposase K07497 K07497; putative transposase D GYM47_09480 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase D GYM47_09705 transposase family protein K07497 K07497; putative transposase D GYM47_02360 site-specific integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D GYM47_06295 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC D GYM47_11950 DASH family cryptochrome K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D GYM47_12465 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein D GYM47_13190 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D GYM47_05710 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D GYM47_03825 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D GYM47_12585 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D GYM47_12710 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D GYM47_15365 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D GYM47_15675 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D GYM47_16060 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D GYM47_16330 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D GYM47_06705 putP; sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D GYM47_17335 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D GYM47_00350 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D GYM47_00835 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D GYM47_05765 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D GYM47_12130 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D GYM47_13650 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D GYM47_04175 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D GYM47_09000 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D GYM47_13860 transporter K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D GYM47_13865 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D GYM47_15520 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D GYM47_04475 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D GYM47_00180 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D GYM47_11510 ABC transporter substrate-binding protein K03607 proQ; ProP effector D GYM47_06590 universal stress protein K06149 uspA; universal stress protein A D GYM47_00840 typA; translational GTPase TypA K06207 typA; GTP-binding protein D GYM47_05840 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D GYM47_12880 PhoH family protein K07175 phoH2; PhoH-like ATPase D GYM47_12095 PrkA family serine protein kinase K07180 prkA; serine protein kinase D GYM47_13200 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein D GYM47_14080 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein D GYM47_06050 SH3 domain-containing protein K07184 ygiM; SH3 domain protein D GYM47_10880 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D GYM47_05355 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D GYM47_05915 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D GYM47_06375 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D GYM47_05275 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB D GYM47_02725 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D GYM47_13365 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD D GYM47_08990 LysM peptidoglycan-binding domain-containing protein K06194 nlpD; lipoprotein NlpD D GYM47_11280 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D GYM47_11275 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D GYM47_06700 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D GYM47_07245 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D GYM47_16570 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D GYM47_06060 hypothetical protein K07286 yajG; uncharacterized lipoprotein D GYM47_14675 AsmA family protein K07289 asmA; AsmA protein D GYM47_03745 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D GYM47_03760 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D GYM47_03765 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D GYM47_03185 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ D GYM47_03985 DUF1656 domain-containing protein K21695 aaeX; protein AaeX C 99994 Others D GYM47_17385 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D GYM47_02920 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D GYM47_04725 glucan biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein D GYM47_13305 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D GYM47_11130 helix-turn-helix transcriptional regulator K07219 K07219; putative molybdopterin biosynthesis protein D GYM47_07210 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D GYM47_17815 copper resistance protein B K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D GYM47_07635 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D GYM47_07965 pqiB; intermembrane transport protein PqiB K06192 pqiB; paraquat-inducible protein B D GYM47_09895 group 1 truncated hemoglobin K06886 glbN; hemoglobin D GYM47_04335 patatin-like phospholipase family protein K07001 K07001; NTE family protein D GYM47_05790 patatin K07001 K07001; NTE family protein D GYM47_18100 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D GYM47_06645 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D GYM47_06655 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D GYM47_02805 metal-dependent hydrolase K07038 K07038; inner membrane protein D GYM47_12885 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D GYM47_08825 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D GYM47_09335 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D GYM47_08645 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D GYM47_16630 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D GYM47_05300 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D GYM47_13950 heme-binding protein K11477 glcG; glc operon protein GlcG D GYM47_13980 hypothetical protein K11477 glcG; glc operon protein GlcG D GYM47_06460 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D GYM47_04120 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF D GYM47_02635 SlyX family protein K03745 slyX; SlyX protein D GYM47_14115 metallopeptidase K02742 sprT; SprT protein D GYM47_07630 SPOR domain-containing protein K03749 dedD; DedD protein D GYM47_06670 sanA-like protein K03748 sanA; SanA protein D GYM47_07970 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D GYM47_13370 DUF368 domain-containing protein K08974 K08974; putative membrane protein D GYM47_15370 DUF350 domain-containing protein K08989 K08989; putative membrane protein D GYM47_05195 TIGR01620 family protein K08990 ycjF; putative membrane protein D GYM47_01275 YchJ family protein K09858 K09858; SEC-C motif domain protein D GYM47_12350 alkylphosphonate utilization protein K06193 phnA; protein PhnA D GYM47_06635 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D GYM47_14635 general stress protein K06884 K06884; uncharacterized protein D GYM47_04615 alpha/beta hydrolase K06889 K06889; uncharacterized protein D GYM47_05200 YcjX family protein K06918 K06918; uncharacterized protein D GYM47_03150 ATP-binding protein K06923 K06923; uncharacterized protein D GYM47_12555 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D GYM47_05630 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D GYM47_07905 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D GYM47_14830 hypothetical protein K06950 K06950; uncharacterized protein D GYM47_00760 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D GYM47_11115 zinc metallopeptidase K06973 K06973; uncharacterized protein D GYM47_14610 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein D GYM47_05040 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D GYM47_12490 glyoxalase K06991 K06991; uncharacterized protein D GYM47_08525 hydrolase K07019 K07019; uncharacterized protein D GYM47_14010 alpha/beta fold hydrolase K07020 K07020; uncharacterized protein D GYM47_14120 YecA family protein K07039 K07039; uncharacterized protein D GYM47_00340 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein D GYM47_00790 TIGR01777 family protein K07071 K07071; uncharacterized protein D GYM47_12275 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein D GYM47_13765 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D GYM47_15555 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D GYM47_16425 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D GYM47_00335 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D GYM47_01600 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D GYM47_03560 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D GYM47_01610 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D GYM47_15820 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D GYM47_15995 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D GYM47_06405 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D GYM47_09025 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D GYM47_11530 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D GYM47_15960 PhoX family phosphatase K07093 K07093; uncharacterized protein D GYM47_11705 YeeE/YedE family protein K07112 K07112; uncharacterized protein D GYM47_11710 YeeE/YedE family protein K07112 K07112; uncharacterized protein D GYM47_14860 YeeE/YedE family protein K07112 K07112; uncharacterized protein D GYM47_02085 YeeE/YedE family protein K07112 K07112; uncharacterized protein D GYM47_02090 YeeE/YedE family protein K07112 K07112; uncharacterized protein D GYM47_12840 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D GYM47_10600 penicillin-binding protein activator K07121 K07121; uncharacterized protein D GYM47_01940 sel1 repeat family protein K07126 K07126; uncharacterized protein D GYM47_04875 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D GYM47_08650 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D GYM47_13790 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D GYM47_01955 DUF501 domain-containing protein K09009 K09009; uncharacterized protein D GYM47_07370 DUF493 family protein K09158 K09158; uncharacterized protein D GYM47_06320 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D GYM47_00755 DUF1365 family protein K09701 K09701; uncharacterized protein D GYM47_11235 DUF333 domain-containing protein K09712 K09712; uncharacterized protein D GYM47_03795 YciI family protein K09780 K09780; uncharacterized protein D GYM47_12090 DUF444 family protein K09786 K09786; uncharacterized protein D GYM47_10450 Trm112 family protein K09791 K09791; uncharacterized protein D GYM47_14055 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D GYM47_17720 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D GYM47_01630 RnfH family protein K09801 K09801; uncharacterized protein D GYM47_06150 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D GYM47_07465 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein D GYM47_00205 RNA-binding protein K00243 K00243; uncharacterized protein D GYM47_08500 DUF2309 family protein K09822 K09822; uncharacterized protein D GYM47_07960 hypothetical protein K09857 K09857; uncharacterized protein D GYM47_01930 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D GYM47_09075 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D GYM47_14710 DUF416 family protein K09891 K09891; uncharacterized protein D GYM47_00155 YecA family protein K09895 K09895; uncharacterized protein D GYM47_03785 YheU family protein K09898 K09898; uncharacterized protein D GYM47_06310 YcgL domain-containing protein K09902 K09902; uncharacterized protein D GYM47_10660 DUF1043 family protein K09908 K09908; uncharacterized protein D GYM47_06755 DUF1315 family protein K09916 K09916; uncharacterized protein D GYM47_13405 N-acetyltransferase K09919 K09919; uncharacterized protein D GYM47_11175 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein D GYM47_17145 DUF484 family protein K09921 K09921; uncharacterized protein D GYM47_14040 hypothetical protein K09926 K09926; uncharacterized protein D GYM47_10470 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D GYM47_02830 DUF2064 domain-containing protein K09931 K09931; uncharacterized protein D GYM47_01555 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein D GYM47_04290 DUF1415 family protein K09941 K09941; uncharacterized protein D GYM47_02005 YegP family protein K09946 K09946; uncharacterized protein D GYM47_15440 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D GYM47_12505 DUF3820 family protein K09954 K09954; uncharacterized protein D GYM47_01685 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein D GYM47_01115 DUF2237 family protein K09966 K09966; uncharacterized protein D GYM47_11000 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D GYM47_11005 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D GYM47_01350 DUF1853 family protein K09977 K09977; uncharacterized protein D GYM47_10340 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D GYM47_07195 VWA domain-containing protein K09989 K09989; uncharacterized protein D GYM47_02135 metal-sensing transcriptional repressor K07807 K07807; uncharacterized protein D GYM47_09515 metal-sensing transcriptional repressor K07807 K07807; uncharacterized protein D GYM47_03820 TIGR00153 family protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024