+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Hirundo rustica (Barn swallow)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 120752608 NOP56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 120755317 NOP58; nucleolar protein 58 K14565 NOP58; nucleolar protein 58 D 120752223 SNU13; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 120761948 DKC1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 120753039 GAR1; H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 120759086 NHP2; H/ACA ribonucleoprotein complex subunit 2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 120747590 NOP10; LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 120753524 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D 120758455 SHQ1; protein SHQ1 homolog K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D 120750940 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 120748216 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 120758641 MPHOSPH10; U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 120751584 RRP7A; ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7 D 120748571 PWP2; periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2 D 120752550 NOP14; nucleolar protein 14 K14766 NOP14; nucleolar protein 14 D 120753553 UTP3; something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 120757671 UTP4; U3 small nucleolar RNA-associated protein 4 homolog K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 120751314 WDR43; LOW QUALITY PROTEIN: WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 120761080 UTP6; U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 120750553 HEATR1; HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 120763213 UTP11; probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 120749208 WDR3; WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 120759599 TBL3; transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 120748225 LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 14 homolog C-like K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 120761932 UTP14A; U3 small nucleolar RNA-associated protein 14 homolog A K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 120765862 UTP15; U3 small nucleolar RNA-associated protein 15 homolog isoform X1 K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 120755330 WDR75; WD repeat-containing protein 75 isoform X1 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 120761013 UTP18; U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 120760750 NOC4L; nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 120751927 UTP20; small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 120765396 WDR36; WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 120765869 NOL6; nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 120753354 UTP23; rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 120753620 FCF1; rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 120751056 UTP25; U3 small nucleolar RNA-associated protein 25 homolog K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 120759609 RSL1D1; ribosomal L1 domain-containing protein 1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 120748726 DDX10; probable ATP-dependent RNA helicase DDX10 isoform X1 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 120755397 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 120752071 DDX47; probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 120763571 DDX49; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 120748173 probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 120761306 DDX52; probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 120753520 DHX15; ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 120760689 DHX37; probable ATP-dependent RNA helicase DHX37 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 120750592 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 120756006 BMS1; ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 120753015 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3] D 120761620 REXO4; RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 120757338 DBR1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 120757703 CSNK2A2; casein kinase II subunit alpha' K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 120760074 CSNK2A1; casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] C Other 90S particles D 120761458 AATF; protein AATF K14782 AATF; protein AATF/BFR2 D 120764938 CMSS1; protein CMSS1 isoform X1 K14784 CMS1; protein CMS1 D 120748716 EMG1; ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 120748307 KRI1; LOW QUALITY PROTEIN: protein KRI1 homolog K14786 KRI1; protein KRI1 D 120752356 KRR1; KRR1 small subunit processome component homolog isoform X1 K06961 KRR1; ribosomal RNA assembly protein D 120760672 RBM19; probable RNA-binding protein 19 isoform X1 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 120754152 NAT10; RNA cytidine acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 120756981 NCL; nucleolin K11294 NCL; nucleolin D 120750835 NOL10; nucleolar protein 10 isoform X1 K14788 NOL10; ribosome biogenesis protein ENP2 D 120751192 PINX1; PIN2/TERF1-interacting telomerase inhibitor 1 K11135 PINX1; Pin2-interacting protein X1 D 120751438 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 120765289 RCL1; RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 120755955 PDCD11; protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5 D 120758349 RRP9; U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9 D 120755953 RRP12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 120751307 RRP36; ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 120759185 TCOF1; treacle protein isoform X1 K14562 TCOF1; Treacher Collins syndrome protein D 120756272 DCAF13; DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 120752512 RIOK1; serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 120765871 RIOK2; serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 120765117 DIMT1; probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 120761205 BUD23; probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 120754864 METTL5; rRNA N6-adenosine-methyltransferase METTL5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 120762881 BYSL; bystin K14797 ENP1; essential nuclear protein 1 D 120751083 LTV1; protein LTV1 homolog K14798 LTV1; protein LTV1 D 120757627 NOB1; RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1 D 120749961 PNO1; RNA-binding protein PNO1 K11884 PNO1; RNA-binding protein PNO1 D 120760648 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 120765411 AK6; adenylate kinase isoenzyme 6 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 120761193 TSR1; pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 120759869 TSR3; 18S rRNA aminocarboxypropyltransferase K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 120757952 PDCD2L; programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4 D 120750294 PDCD2; LOW QUALITY PROTEIN: programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 120752418 RPS19BP1; active regulator of SIRT1 K26536 RPS19BP1; active regulator of SIRT1 D 120751001 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1 D 120763723 KPNB1; importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1 D 120764900 transportin-1-like K18752 TNPO1; transportin-1 D 120765164 TNPO1; transportin-1 K18752 TNPO1; transportin-1 D 120748465 IPO5; importin-5 K20222 IPO5; importin-5 D 120754228 IPO7; LOW QUALITY PROTEIN: importin-7 K20223 IPO7; importin-7 D 120762780 IPO9; importin-9 K20224 IPO9; importin-9 C Other pre-40S particles D 120752774 ATP8A1; phospholipid-transporting ATPase IA isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 120749633 ATP8A2; phospholipid-transporting ATPase IB isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 120758913 EIF3J; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J D 120753093 ABCE1; ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 120760798 DDX5; probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 120755397 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 120756064 nucleolar RNA helicase 2-like K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 120756117 nucleolar RNA helicase 2-like K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 120754586 DDX24; ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 120760005 DDX27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 120761595 DDX31; probable ATP-dependent RNA helicase DDX31 isoform X1 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 120760745 DDX51; ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 120760514 DDX54; ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 120760552 DDX55; ATP-dependent RNA helicase DDX55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 120765212 MTREX; exosome RNA helicase MTR4 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 120758463 GNL3; guanine nucleotide-binding protein-like 3 K14538 NUG1; nuclear GTP-binding protein D 120763230 GNL2; nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein D 120750878 GTPBP4; GTP-binding protein 4 K06943 NOG1; nucleolar GTP-binding protein D 120757353 LSG1; large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 120758880 EFL1; elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 120762668 REXO2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-] D 120763503 REXO1; RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 120759846 REXO5; RNA exonuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 120757041 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D 120750202 XRN2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E 120763415 POP1; ribonucleases P/MRP protein subunit POP1 isoform X1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 120757676 POP4; ribonuclease P protein subunit p29 isoform X1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 120760718 POP5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 120755988 RPP30; ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E 131378789 POP7; ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] E 120758772 RPP25; ribonuclease P protein subunit p25 isoform X1 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 120755083 RPP38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] E 131378502 ENOSF1; LOW QUALITY PROTEIN: mitochondrial enolase superfamily member 1 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] E 120762715 RPP40; ribonuclease P protein subunit p40 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] C Kinases D 120762200 NOL9; polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 120758764 ABCF2; ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 120759949 EIF6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D 120762609 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 120753971 HSPA2; heat shock-related 70 kDa protein 2 K26598 HSPA2; heat shock 70kDa protein 2 D 120762255 MRTO4; mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4 D 120757395 NMD3; 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D 120762112 NXT2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2 D 120760648 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 120763192 ZNF622; cytoplasmic 60S subunit biogenesis factor ZNF622 K14816 REI1; pre-60S factor REI1 D 120761431 SBDS; ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 120752521 AFG2A; ATPase family gene 2 protein homolog A K14575 AFG2; AAA family ATPase D 120758947 AFG2B; ATPase family gene 2 protein homolog B K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10] D 120753953 CINP; cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein D 120763136 AIRIM; AFG2-interacting ribosome maturation factor K26053 C1ORF109; ribosome biogenesis protein C1orf109 D 120751001 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1 D 120763723 KPNB1; importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1 D 120764900 transportin-1-like K18752 TNPO1; transportin-1 D 120765164 TNPO1; transportin-1 K18752 TNPO1; transportin-1 D 120748465 IPO5; importin-5 K20222 IPO5; importin-5 D 120754228 IPO7; LOW QUALITY PROTEIN: importin-7 K20223 IPO7; importin-7 D 120762780 IPO9; importin-9 K20224 IPO9; importin-9 D 120764753 DUSP12; dual specificity protein phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 120751824 TEX10; testis-expressed protein 10 isoform X3 K14827 IPI1; pre-rRNA-processing protein IPI1 D 120763397 WDR18; WD repeat-containing protein 18 isoform X1 K14829 IPI3; pre-rRNA-processing protein IPI3 D 120764986 LAS1L; LOW QUALITY PROTEIN: ribosomal biogenesis protein LAS1L K16912 LAS1; ribosomal biogenesis protein LAS1 C Ribosome quality control proteins D 120748592 LTN1; E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 120757880 TCF25; ribosome quality control complex subunit TCF25 K24970 TCF25; transcription factor 25 D 120753850 NEMF; ribosome quality control complex subunit NEMF K24971 NEMF; nuclear export mediator factor NEMF D 120765086 VCP; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D 120760926 NPLOC4; nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4 D 120760696 UFD1; ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1 K14016 UFD1; ubiquitin fusion degradation protein 1 D 120754955 ANKZF1; tRNA endonuclease ANKZF1 isoform X1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 120748255 BRIX1; LOW QUALITY PROTEIN: ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1 D 120763114 ZNF593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20 D 120753795 CCDC86; coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1 D 120756823 EBNA1BP2; probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2 D 120756630 TMED5; transmembrane emp24 domain-containing protein 5 K14825 TMED5; p24 family protein gamma-2 D 120750290 PAK1IP1; p21-activated protein kinase-interacting protein 1 isoform X1 K14830 MAK11; protein MAK11 D 120748292 MAK16; protein MAK16 homolog isoform X1 K14831 MAK16; protein MAK16 D 120750508 CEBPZ; CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21 D 120750075 MDN1; midasin K14572 MDN1; midasin D 120757779 NIP7; 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 120762240 NOC2L; nucleolar complex protein 2 homolog isoform X1 K14833 NOC2; nucleolar complex protein 2 D 120755581 NOC3L; nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 120749564 NOP2; probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 120758155 NOL8; nucleolar protein 8 isoform X1 K14836 NOP8; nucleolar protein 8 D 120751013 RBM34; RNA-binding protein 34 K14837 NOP12; nucleolar protein 12 D 120755480 NIFK; MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15 D 120748247 WDR74; WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 120765976 NSA2; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 120760711 PES1; pescadillo homolog K14843 PES1; pescadillo D 120765487 PUM3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6 D 120751438 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 120753916 RIOX1; ribosomal oxygenase 1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D 120749628 RIOX2; ribosomal oxygenase 2 isoform X1 K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66] D 120751036 NVL; nuclear valosin-containing protein-like isoform X1 K14571 RIX7; ribosome biogenesis ATPase D 120756462 RPF1; ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 120750865 RPF2; ribosome production factor 2 homolog isoform X1 K14847 RPF2; ribosome production factor 2 D 120749120 RRP1B; ribosomal RNA processing protein 1 homolog B K14849 RRP1; ribosomal RNA-processing protein 1 D 120748454 RRP8; ribosomal RNA-processing protein 8 isoform X1 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 120755953 RRP12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 120751802 NOL12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17 D 120757648 RRS1; ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 120761175 NLE1; notchless protein homolog 1 isoform X1 K14855 RSA4; ribosome assembly protein 4 D 120753550 SDAD1; protein SDA1 homolog K14856 SDA1; protein SDA1 D 120763899 FTSJ3; pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 120747887 PPAN; suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 120752712 TMA16; translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16 D 120765386 URB1; LOW QUALITY PROTEIN: nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 120749802 URB2; unhealthy ribosome biogenesis protein 2 homolog K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D 120755373 WDR12; ribosome biogenesis protein WDR12 K14863 WDR12; ribosome biogenesis protein D 120748644 NUFIP1; FMR1-interacting protein NUFIP1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 D 120761547 ZNHIT3; zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 120756052 BCCIP; BRCA2 and CDKN1A-interacting protein K15262 BCP1; protein BCP1 C 120753500 LYAR; cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein C 120756493 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 isoform X1 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] C 120761245 NSUN5; 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 120750320 TFB1M; dimethyladenosine transferase 1, mitochondrial isoform X1 K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-] C 120761505 MRM1; rRNA methyltransferase 1, mitochondrial K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 120751969 BMT2; S-adenosylmethionine sensor upstream of mTORC1 isoform X1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C 120761507 MRM3; rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 120752990 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-] C 120757866 DDX28; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 120761502 DHX33; ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6] C 120754489 IGHMBP2; DNA-binding protein SMUBP-2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 120766135 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-] C 120759823 KDM8; bifunctional peptidase and arginyl-hydroxylase JMJD5 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C 120765452 PHF6; PHD finger protein 6 isoform X1 K23310 PHF6; PHD finger protein 6 C 120761226 ERAL1; GTPase Era, mitochondrial K03595 era; GTPase C 120751951 NOPCHAP1; NOP protein chaperone 1 isoform X1 K26142 NOPCHAP1; NOP protein chaperone 1 C 120764470 PA2G4; proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein C 120755807 MTG1; mitochondrial ribosome-associated GTPase 1 K19828 MTG1; mitochondrial GTPase 1 C 120760304 MTG2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] C 120752993 NOA1; nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1 # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 120752608 NOP56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 120761624 RPL7A; large ribosomal subunit protein eL8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 120761948 DKC1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 120747590 NOP10; LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D 120759692 MRM2; rRNA methyltransferase 2, mitochondrial isoform X1 K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors C 120753015 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C 120761226 ERAL1; GTPase Era, mitochondrial K03595 era; GTPase C 120760304 MTG2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C 120762997 YRDC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions D 120760330 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12 D 120748293 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13 D 120762676 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 120762678 small nucleolar RNA SNORD14 K14865 SNORD14; small nucleolar RNA SNORD14 D 120749724 small nucleolar RNA SNORD15 K14921 SNORD15; small nucleolar RNA SNORD15 D 120762183 small nucleolar RNA SNORD17 K26292 SNORD17; small nucleolar RNA SNORD17 D 120762184 small nucleolar RNA SNORD17 K26292 SNORD17; small nucleolar RNA SNORD17 D 120759015 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18 D 120759014 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18 D 120761925 small nucleolar RNA SNORD24 K14867 SNORD24; small nucleolar RNA SNORD24 D 120747734 small nucleolar RNA SNORD34 K14888 SNORD34; small nucleolar RNA SNORD34 D 120761924 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36 D 120761918 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36 D 120761153 small nucleolar RNA SNORD104 K14904 SNORD104; small nucleolar RNA SNORD104 C SnoRNAs act as guides for 2'-O-ribose methylation D 120761152 small nucleolar RNA R38 K14869 SNORD1; small nucleolar RNA SNORD1 D 120757535 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2 D 120761559 small nucleolar RNA Z17 K27197 SNORD4; small nucleolar RNA SNORD4 D 120749720 small nucleolar RNA SNORD5 K27198 SNORD5; small nucleolar RNA SNORD5 D 120749707 small nucleolar RNA Z40 K27199 SNORD6; small nucleolar RNA SNORD6 D 120755510 small nucleolar RNA SNORD11 K14896 SNORD11; small nucleolar RNA SNORD11 D 120755511 small nucleolar RNA SNORD11B K14896 SNORD11; small nucleolar RNA SNORD11 D 120759016 small nucleolar RNA SNORD16 K14906 SNORD16; small nucleolar RNA SNORD16 D 120758515 small nucleolar RNA SNORD19 K14934 SNORD19; small nucleolar RNA SNORD19 D 120757527 small nucleolar RNA SNORD20 K27207 SNORD20; small nucleolar RNA SNORD20 D 120763577 small nucleolar RNA SNORD37 K27210 SNORD37; small nucleolar RNA SNORD37 D 120761571 small nucleolar RNA SNORD42 K14892 SNORD42; small nucleolar RNA SNORD42 D 120756900 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45 D 120761560 small nucleolar RNA SNORD49 K26304 SNORD49; small nucleolar RNA SNORD49 D 120755509 small nucleolar RNA SNORD51 K14885 SNORD51; small nucleolar RNA SNORD51 D 120751339 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92 D 120766015 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58 D 120765017 small nucleolar RNA SNORD61 K26311 SNORD61; small nucleolar RNA SNORD61 D 120759446 small nucleolar RNA SNORD63 K27111 SNORD63; small nucleolar RNA SNORD63 D 120759447 small nucleolar RNA SNORD63 K27111 SNORD63; small nucleolar RNA SNORD63 D 120761565 small nucleolar RNA SNORD65 K14903 SNORD65; small nucleolar RNA SNORD65 D 120757530 small nucleolar RNA SNORD66 K27211 SNORD66; small nucleolar RNA SNORD66 D 120757531 small nucleolar RNA SNORD66 K27211 SNORD66; small nucleolar RNA SNORD66 D 120754821 small nucleolar RNA SNORD67 K27212 SNORD67; small nucleolar RNA SNORD67 D 120758517 small nucleolar RNA SNORD69 K27214 SNORD69; small nucleolar RNA SNORD69 D 120755513 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70 D 120755514 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70 D 120758033 small nucleolar RNA SNORD71 K27216 SNORD71; small nucleolar RNA SNORD71 D 120765011 small nucleolar RNA SNORD72 K27181 SNORD72; small nucleolar RNA SNORD72 D 120753581 small nucleolar RNA SNORD73 K27208 SNORD73; small nucleolar RNA SNORD73 D 120756902 small nucleolar RNA SNORD74 K14890 SNORD74; small nucleolar RNA SNORD74 D 120756908 small nucleolar RNA SNORD75 K26312 SNORD75; small nucleolar RNA SNORD75 D 120756895 small nucleolar RNA SNORD79 K26314 SNORD79; small nucleolar RNA SNORD79 D 120757526 small nucleolar RNA SNORD82 K27133 SNORD82; small nucleolar RNA SNORD82 D 120752477 small nucleolar RNA U83B K27134 SNORD83; small nucleolar RNA SNORD83 D 120749719 small nucleolar RNA SNORD89 K27178 SNORD89; small nucleolar RNA SNORD89 D 120761566 small nucleolar RNA SNORD91 family K27113 SNORD91; small nucleolar RNA SNORD91 D 120761567 small nucleolar RNA SNORD91 family K27113 SNORD91; small nucleolar RNA SNORD91 D 120764417 small nucleolar RNA SNORD93 K27114 SNORD93; small nucleolar RNA SNORD93 D 120753578 small nucleolar RNA SNORD94 K27115 SNORD94; small nucleolar RNA SNORD94 D 120754823 small nucleolar RNA SNORD97 K27118 SNORD97; small nucleolar RNA SNORD97 D 120756238 small nucleolar RNA SNORD98 K27119 SNORD98; small nucleolar RNA SNORD98 D 120763276 small nucleolar RNA SNORD99 K27120 SNORD99; small nucleolar RNA SNORD99 D 120751347 small nucleolar RNA SNORD100 K27121 SNORD100; small nucleolar RNA SNORD100 D 120751336 small nucleolar RNA SNORD101 K27122 SNORD101; small nucleolar RNA SNORD101 D 120749702 small nucleolar RNA SNORD102 K27123 SNORD102; small nucleolar RNA SNORD102 D 120763277 small nucleolar RNA SNORD103/SNORD85 K27124 SNORD103; small nucleolar RNA SNORD103 D 120758034 small nucleolar RNA SNORD111 K27130 SNORD111; small nucleolar RNA SNORD111 D 120762180 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117 D 120762181 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117 D 120765012 small nucleolar RNA SNORD121A K27137 SNORD121; small nucleolar RNA SNORD121 D 120765013 small nucleolar RNA SNORD121A K27137 SNORD121; small nucleolar RNA SNORD121 D 120764423 small nucleolar RNA SNORD123 K27138 SNORD123; small nucleolar RNA SNORD123 D 120760767 small nucleolar RNA SNORD125 K27140 SNORD125; small nucleolar RNA SNORD125 D 120754822 small nucleolar RNA SNORD127 K27142 SNORD127; small nucleolar RNA SNORD127 B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions D 120763270 small nucleolar RNA SNORA73 family K14908 SNORA73; small nucleolar RNA SNORA73 D 120758032 small nucleolar RNA SNORA50 K14928 SNORA50_76; small nucleolar RNA SNORA50/76 D 120752476 small nucleolar RNA SNORA53 K14929 SNORA53; small nucleolar RNA SNORA53 D 120760766 small nucleolar RNA SNORA77 K14935 SNORA77; small nucleolar RNA SNORA77 C SnoRNAs act as guides for pseudouridynation D 120764403 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62 D 120758511 small nucleolar RNA SNORA7 K26322 SNORA7; small nucleolar RNA SNORA7 D 120751342 small nucleolar RNA SNORA14 K14916 SNORA14; small nucleolar RNA SNORA14 D 120749714 small nucleolar RNA SNORA18 K26327 SNORA18; small nucleolar RNA SNORA18 D 120761563 small nucleolar RNA SNORA22 K26329 SNORA22; small nucleolar RNA SNORA22 D 120749715 small nucleolar RNA SNORA27 K26333 SNORA27; small nucleolar RNA SNORA27 D 120749705 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31 D 120749706 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31 D 120766014 small nucleolar RNA SNORA47 K27149 SNORA47; small nucleolar RNA SNORA47 D 120763271 small nucleolar RNA SNORA55 K27150 SNORA55; small nucleolar RNA SNORA55 D 120763273 small nucleolar RNA SNORA55 K27150 SNORA55; small nucleolar RNA SNORA55 D 120764407 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72 D 120758513 small nucleolar RNA SNORA84 K27151 SNORA84; small nucleolar RNA SNORA84 B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024