+F Repair protein KO #

  DNA Repair and Recombination Proteins - Haloarcula taiwanensis

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D BVU17_11805 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D BVU17_07145 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D BVU17_11935 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D BVU17_06665 FAD-binding protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E BVU17_07810 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E BVU17_13715 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E BVU17_08530 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E BVU17_06755 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E BVU17_15525 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E BVU17_11775 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex E BVU17_17960 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen E BVU17_00600 DNA polymerase III sliding clamp K04802 PCNA; proliferating cell nuclear antigen E BVU17_03900 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E BVU17_05715 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex E BVU17_04545 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E BVU17_00035 helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E BVU17_06495 helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D RPA (replication factor A) E BVU17_13405 replication factor A K07466 RFA1; replication factor A1 D Other NER factors E BVU17_05715 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) E BVU17_13405 replication factor A K07466 RFA1; replication factor A1 D RFC (replication factor C) D Other MMR factors E BVU17_17960 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen E BVU17_00600 DNA polymerase III sliding clamp K04802 PCNA; proliferating cell nuclear antigen E BVU17_05715 DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) E BVU17_13405 replication factor A K07466 RFA1; replication factor A1 D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors D BVU17_17960 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen D BVU17_00600 DNA polymerase III sliding clamp K04802 PCNA; proliferating cell nuclear antigen B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D BVU17_08590 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BVU17_07840 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BVU17_12790 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D BVU17_11805 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D BVU17_07145 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D BVU17_11935 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D BVU17_06665 FAD-binding protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D BVU17_05545 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] C BER (base exicision repair) D DNA glycosylases E BVU17_14835 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E BVU17_04285 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E BVU17_00365 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E BVU17_03785 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E BVU17_08185 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E BVU17_07810 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E BVU17_13715 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E BVU17_06755 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E BVU17_15525 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] E BVU17_11775 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E BVU17_12195 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] E BVU17_06480 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D RecJ E BVU17_01655 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E BVU17_01470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E BVU17_12610 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E BVU17_01265 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E BVU17_01445 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E BVU17_13300 ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E BVU17_01470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors E BVU17_14405 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS E BVU17_00940 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS E BVU17_00650 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 E BVU17_08430 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D Molecular matchmaker E BVU17_14465 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase E BVU17_01470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E BVU17_13300 ATP-dependent DNA helicase Rep K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E BVU17_11495 chromosome segregation protein K03546 sbcC; DNA repair protein SbcC/Rad50 E BVU17_11500 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E BVU17_01655 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins E BVU17_00840 DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA E BVU17_10265 DNA repair and recombination protein RadB K04484 radB; DNA repair protein RadB E BVU17_00580 nucleoid-structuring protein H-NS K03552 hjr; holliday junction resolvase [EC:3.1.21.10] E BVU17_11495 chromosome segregation protein K03546 sbcC; DNA repair protein SbcC/Rad50 E BVU17_11500 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 E BVU17_00710 ski2-type helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] E BVU17_18510 hypothetical protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F BVU17_05750 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F BVU17_05745 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F BVU17_10655 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] F BVU17_01095 DUF91 domain-containing protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F BVU17_01655 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F BVU17_01470 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F BVU17_12610 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F BVU17_01265 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D BVU17_05385 DNA polymerase IV K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase D BVU17_06455 DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X) C DNA helicases D BVU17_07695 helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D BVU17_08410 helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] C Modulation of nucleotide pools D BVU17_08590 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BVU17_07840 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BVU17_12790 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BVU17_10540 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C Others D BVU17_02745 hypothetical protein K22585 nreA; DNA repair protein NreA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024