+D GENES KO
#
KEGG Orthology (KO) - Candidatus Hepatoplasma vulgare
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hvu00010]
D HPAVJP_0770 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HPAVJP_3620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HPAVJP_3770 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HPAVJP_3850 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HPAVJP_3870 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HPAVJP_3860 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HPAVJP_3840 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HPAVJP_1150 eno1; enolase 1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3780 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HPAVJP_4170 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HPAVJP_5700 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HPAVJP_3730 ypqE; putative phosphotransferase enzyme IIA component YpqE K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_5880 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_3880 PTS sugar transporter K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HPAVJP_5360 hypothetical protein K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:hvu00020]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HPAVJP_4170 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hvu00030]
D HPAVJP_3620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HPAVJP_2340 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HPAVJP_5700 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HPAVJP_0090 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HPAVJP_3770 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions
C 00051 Fructose and mannose metabolism [PATH:hvu00051]
D HPAVJP_1590 hypothetical protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HPAVJP_4320 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HPAVJP_3770 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HPAVJP_3850 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:hvu00052]
D HPAVJP_5700 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HPAVJP_0770 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HPAVJP_3770 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HPAVJP_0730 fructose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D HPAVJP_0750 lacA; galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D HPAVJP_0760 lacB; galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:hvu00500]
D HPAVJP_3730 ypqE; putative phosphotransferase enzyme IIA component YpqE K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_5880 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_3940 treA; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D HPAVJP_5700 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HPAVJP_0770 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HPAVJP_3620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hvu00520]
D HPAVJP_3730 ypqE; putative phosphotransferase enzyme IIA component YpqE K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_5880 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_3880 PTS sugar transporter K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HPAVJP_5360 hypothetical protein K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HPAVJP_0770 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HPAVJP_5700 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HPAVJP_3620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HPAVJP_1590 hypothetical protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HPAVJP_4320 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:hvu00620]
D HPAVJP_4170 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HPAVJP_4190 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HPAVJP_4180 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HPAVJP_3780 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HPAVJP_4290 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hvu00630]
D HPAVJP_0470 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:hvu00640]
D HPAVJP_4190 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HPAVJP_4180 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HPAVJP_4150 hypothetical protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00650 Butanoate metabolism
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:hvu00562]
D HPAVJP_3750 fbaA; fructose-1,6-bisphosphate aldolase, class II K03339 iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase [EC:4.1.2.29]
D HPAVJP_3850 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hvu00190]
D HPAVJP_0540 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HPAVJP_0560 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HPAVJP_0550 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HPAVJP_0530 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HPAVJP_0570 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HPAVJP_0500 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HPAVJP_0520 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HPAVJP_0510 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HPAVJP_1650 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:hvu00710]
D HPAVJP_3860 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HPAVJP_3870 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HPAVJP_3850 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00720 Other carbon fixation pathways [PATH:hvu00720]
D HPAVJP_1990 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HPAVJP_4180 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HPAVJP_4190 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:hvu00680]
D HPAVJP_0470 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HPAVJP_1150 eno1; enolase 1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3770 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HPAVJP_4190 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HPAVJP_4180 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HPAVJP_3840 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism
D HPAVJP_0910 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D HPAVJP_4590 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D HPAVJP_4700 acp; acyl carrier protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hvu00561]
D HPAVJP_2480 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HPAVJP_1270 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HPAVJP_3510 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HPAVJP_1460 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:hvu00564]
D HPAVJP_1800 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HPAVJP_2490 glpO; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D HPAVJP_3510 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HPAVJP_1460 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HPAVJP_4830 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HPAVJP_1880 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HPAVJP_0330 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hvu00230]
D HPAVJP_5700 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HPAVJP_0090 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HPAVJP_2380 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HPAVJP_0310 deoD; purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HPAVJP_0150 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HPAVJP_4420 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HPAVJP_2370 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HPAVJP_2790 deoxyguanosine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D HPAVJP_2800 hypothetical protein K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D HPAVJP_1920 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D HPAVJP_5070 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HPAVJP_0910 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:hvu00240]
D HPAVJP_4850 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HPAVJP_1780 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HPAVJP_3390 hypothetical protein K00876 udk; uridine kinase [EC:2.7.1.48]
D HPAVJP_3400 hypothetical protein K00876 udk; uridine kinase [EC:2.7.1.48]
D HPAVJP_0480 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HPAVJP_1920 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D HPAVJP_1480 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D HPAVJP_2200 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HPAVJP_2790 deoxyguanosine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D HPAVJP_2800 hypothetical protein K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D HPAVJP_0420 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HPAVJP_1470 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hvu00250]
D HPAVJP_2370 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HPAVJP_2380 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
C 00260 Glycine, serine and threonine metabolism [PATH:hvu00260]
D HPAVJP_0470 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HPAVJP_3840 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00270 Cysteine and methionine metabolism
D HPAVJP_1940 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00280 Valine, leucine and isoleucine degradation [PATH:hvu00280]
D HPAVJP_4150 hypothetical protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis
C 00310 Lysine degradation
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:hvu00220]
D HPAVJP_0890 arcB; ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HPAVJP_0880 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D HPAVJP_0910 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:hvu00430]
D HPAVJP_4180 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HPAVJP_4190 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:hvu00450]
D HPAVJP_1060 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HPAVJP_5450 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HPAVJP_5830 metS; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D HPAVJP_0470 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism
C 00480 Glutathione metabolism
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
D HPAVJP_1590 hypothetical protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HPAVJP_4320 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00550 Peptidoglycan biosynthesis
D HPAVJP_2210 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hvu00730]
D HPAVJP_1610 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HPAVJP_4200 hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D HPAVJP_5070 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:hvu00740]
D HPAVJP_4490 hypothetical protein K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D HPAVJP_4750 ribC; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:hvu00760]
D HPAVJP_0310 deoD; purine nucleoside phosphorylase DeoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HPAVJP_2710 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HPAVJP_3500 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D HPAVJP_1900 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
C 00770 Pantothenate and CoA biosynthesis [PATH:hvu00770]
D HPAVJP_4430 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HPAVJP_4550 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HPAVJP_1450 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism [PATH:hvu00785]
D HPAVJP_4140 lplA; lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HPAVJP_4170 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HPAVJP_4150 hypothetical protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
C 00790 Folate biosynthesis [PATH:hvu00790]
D HPAVJP_5340 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
C 00670 One carbon pool by folate [PATH:hvu00670]
D HPAVJP_5340 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HPAVJP_1990 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HPAVJP_0470 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HPAVJP_3170 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hvu00521]
D HPAVJP_0770 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HPAVJP_5700 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HPAVJP_0770 glcK; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HPAVJP_4700 acp; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D HPAVJP_1940 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hvu03020]
D HPAVJP_1020 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HPAVJP_1030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HPAVJP_5020 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hvu03010]
D HPAVJP_4870 hypothetical protein K02967 RP-S2; small subunit ribosomal protein S2
D HPAVJP_5210 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HPAVJP_4620 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HPAVJP_5100 hypothetical protein K02988 RP-S5; small subunit ribosomal protein S5
D HPAVJP_0210 hypothetical protein K02990 RP-S6; small subunit ribosomal protein S6
D HPAVJP_0820 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HPAVJP_5130 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HPAVJP_4910 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HPAVJP_5280 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HPAVJP_5030 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HPAVJP_0810 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HPAVJP_5040 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HPAVJP_5140 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D HPAVJP_4740 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HPAVJP_1340 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HPAVJP_5180 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HPAVJP_0230 hypothetical protein K02963 RP-S18; small subunit ribosomal protein S18
D HPAVJP_5230 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HPAVJP_3200 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HPAVJP_0990 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HPAVJP_5240 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HPAVJP_5270 hypothetical protein K02906 RP-L3; large subunit ribosomal protein L3
D HPAVJP_5260 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HPAVJP_5150 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HPAVJP_5120 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HPAVJP_1010 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HPAVJP_1000 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HPAVJP_0980 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HPAVJP_4920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HPAVJP_5170 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HPAVJP_5090 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HPAVJP_5200 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HPAVJP_5010 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HPAVJP_5110 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HPAVJP_1370 hypothetical protein K02884 RP-L19; large subunit ribosomal protein L19
D HPAVJP_2130 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HPAVJP_3430 hypothetical protein K02888 RP-L21; large subunit ribosomal protein L21
D HPAVJP_5220 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HPAVJP_5250 hypothetical protein K02892 RP-L23; large subunit ribosomal protein L23
D HPAVJP_5160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HPAVJP_3450 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HPAVJP_1250 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HPAVJP_5920 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HPAVJP_2570 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HPAVJP_0960 rpmGB; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D HPAVJP_2680 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HPAVJP_2140 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hvu00970]
D HPAVJP_5500 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HPAVJP_3300 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HPAVJP_3310 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HPAVJP_3290 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HPAVJP_3370 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HPAVJP_2610 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HPAVJP_1970 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HPAVJP_2890 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HPAVJP_1180 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HPAVJP_0380 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HPAVJP_0930 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HPAVJP_5830 metS; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HPAVJP_3170 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HPAVJP_1720 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HPAVJP_1400 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HPAVJP_2460 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HPAVJP_0190 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HPAVJP_5480 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HPAVJP_4730 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HPAVJP_2290 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HPAVJP_2100 pheS2; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HPAVJP_2110 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HPAVJP_4640 tyrS2; tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HPAVJP_4480 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hvu03060]
D HPAVJP_5080 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HPAVJP_0260 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D HPAVJP_0590 secA1; protein translocase subunit SecA 1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HPAVJP_1320 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HPAVJP_1300 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system
D HPAVJP_3320 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:hvu03018]
D HPAVJP_1150 eno1; enolase 1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_0270 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HPAVJP_1740 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HPAVJP_3770 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HPAVJP_3110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hvu03030]
D HPAVJP_4580 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HPAVJP_4810 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HPAVJP_0400 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HPAVJP_0020 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HPAVJP_0250 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HPAVJP_2880 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HPAVJP_0220 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D HPAVJP_5850 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hvu03410]
D HPAVJP_4560 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HPAVJP_2410 hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HPAVJP_2450 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HPAVJP_5850 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hvu03420]
D HPAVJP_4300 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D HPAVJP_4360 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D HPAVJP_4220 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D HPAVJP_2010 pcrA; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HPAVJP_5850 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hvu03430]
D HPAVJP_2010 pcrA; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HPAVJP_0220 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D HPAVJP_4580 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HPAVJP_4810 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HPAVJP_0020 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HPAVJP_0400 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HPAVJP_5850 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:hvu03440]
D HPAVJP_0220 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D HPAVJP_0340 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HPAVJP_2180 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D HPAVJP_0410 hypothetical protein K06187 recR; recombination protein RecR
D HPAVJP_1910 recA; protein RecA K03553 recA; recombination protein RecA
D HPAVJP_4580 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HPAVJP_4810 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HPAVJP_0020 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HPAVJP_0400 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hvu02010]
D HPAVJP_5730 hypothetical protein K23535 nupB; general nucleoside transport system permease protein
D HPAVJP_5720 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D HPAVJP_5740 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HPAVJP_2040 hypothetical protein K02037 pstC; phosphate transport system permease protein
D HPAVJP_2050 hypothetical protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HPAVJP_5410 hypothetical protein K15582 oppC; oligopeptide transport system permease protein
D HPAVJP_5400 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HPAVJP_4970 hypothetical protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HPAVJP_4940 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D HPAVJP_4980 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS) [PATH:hvu02060]
D HPAVJP_3630 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HPAVJP_3740 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HPAVJP_3880 PTS sugar transporter K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HPAVJP_5360 hypothetical protein K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HPAVJP_3730 ypqE; putative phosphotransferase enzyme IIA component YpqE K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_5880 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:hvu03070]
D HPAVJP_0260 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D HPAVJP_5080 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HPAVJP_0590 secA1; protein translocase subunit SecA 1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HPAVJP_1300 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HPAVJP_1320 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system
D HPAVJP_0010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hvu02024]
D HPAVJP_5410 hypothetical protein K15582 oppC; oligopeptide transport system permease protein
D HPAVJP_5400 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HPAVJP_5420 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HPAVJP_0260 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D HPAVJP_5080 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HPAVJP_0590 secA1; protein translocase subunit SecA 1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HPAVJP_1300 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D HPAVJP_1320 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D HPAVJP_2870 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HPAVJP_1150 eno1; enolase 1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D HPAVJP_5410 hypothetical protein K15582 oppC; oligopeptide transport system permease protein
D HPAVJP_5400 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hvu01000]
C 01001 Protein kinases
C 01009 Protein phosphatases and associated proteins [BR:hvu01009]
D HPAVJP_3770 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HPAVJP_4390 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:hvu01002]
D HPAVJP_2600 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D HPAVJP_5060 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HPAVJP_0160 hypothetical protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HPAVJP_4670 glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D HPAVJP_4820 hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HPAVJP_1710 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins
C 01004 Lipid biosynthesis proteins [BR:hvu01004]
D HPAVJP_1270 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HPAVJP_3510 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HPAVJP_1460 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases
C 01007 Amino acid related enzymes [BR:hvu01007]
D HPAVJP_5500 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HPAVJP_4640 tyrS2; tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HPAVJP_4480 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HPAVJP_0930 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HPAVJP_5480 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HPAVJP_5830 metS; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HPAVJP_2460 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HPAVJP_1720 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HPAVJP_1400 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HPAVJP_0190 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HPAVJP_2610 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HPAVJP_1970 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HPAVJP_2290 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HPAVJP_2890 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HPAVJP_0380 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HPAVJP_4730 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HPAVJP_1180 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HPAVJP_3370 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HPAVJP_2100 pheS2; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HPAVJP_2110 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hvu00194]
D HPAVJP_0570 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HPAVJP_0560 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HPAVJP_0550 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HPAVJP_0540 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HPAVJP_0530 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HPAVJP_0520 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HPAVJP_0510 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HPAVJP_0500 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hvu03000]
D HPAVJP_5550 spo0J; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HPAVJP_3090 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HPAVJP_2550 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hvu03021]
D HPAVJP_5020 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HPAVJP_1020 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HPAVJP_1030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HPAVJP_2870 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D HPAVJP_4800 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HPAVJP_2560 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D HPAVJP_0970 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HPAVJP_3410 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:hvu03019]
D HPAVJP_1280 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HPAVJP_1740 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HPAVJP_0270 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HPAVJP_2820 hypothetical protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D HPAVJP_1150 eno1; enolase 1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3770 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HPAVJP_3110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
C 03041 Spliceosome
C 03011 Ribosome [BR:hvu03011]
D HPAVJP_4870 hypothetical protein K02967 RP-S2; small subunit ribosomal protein S2
D HPAVJP_5210 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HPAVJP_4620 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HPAVJP_5100 hypothetical protein K02988 RP-S5; small subunit ribosomal protein S5
D HPAVJP_0210 hypothetical protein K02990 RP-S6; small subunit ribosomal protein S6
D HPAVJP_0820 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HPAVJP_5130 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HPAVJP_4910 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HPAVJP_5280 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HPAVJP_5030 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HPAVJP_0810 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HPAVJP_5040 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HPAVJP_5140 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D HPAVJP_4740 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HPAVJP_1340 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HPAVJP_5180 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HPAVJP_0230 hypothetical protein K02963 RP-S18; small subunit ribosomal protein S18
D HPAVJP_5230 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HPAVJP_3200 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HPAVJP_0990 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HPAVJP_5240 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HPAVJP_5270 hypothetical protein K02906 RP-L3; large subunit ribosomal protein L3
D HPAVJP_5260 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HPAVJP_5150 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HPAVJP_5120 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HPAVJP_1000 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HPAVJP_0980 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HPAVJP_1010 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HPAVJP_4920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HPAVJP_5170 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HPAVJP_5090 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HPAVJP_5200 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HPAVJP_5010 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HPAVJP_5110 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HPAVJP_1370 hypothetical protein K02884 RP-L19; large subunit ribosomal protein L19
D HPAVJP_2130 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HPAVJP_3430 hypothetical protein K02888 RP-L21; large subunit ribosomal protein L21
D HPAVJP_5220 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HPAVJP_5250 hypothetical protein K02892 RP-L23; large subunit ribosomal protein L23
D HPAVJP_5160 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HPAVJP_3450 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HPAVJP_1250 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HPAVJP_5920 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HPAVJP_2570 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HPAVJP_0960 rpmGB; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D HPAVJP_2680 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HPAVJP_2140 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
C 03009 Ribosome biogenesis [BR:hvu03009]
D HPAVJP_1280 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HPAVJP_2190 era; GTPase Era K03595 era; GTPase
D HPAVJP_2350 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D HPAVJP_4800 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D HPAVJP_2560 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D HPAVJP_0970 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D HPAVJP_1510 ribosomal large subunit pseudouridine synthase B K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HPAVJP_0080 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HPAVJP_4450 RNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HPAVJP_1520 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HPAVJP_5710 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HPAVJP_2540 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HPAVJP_0440 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HPAVJP_0940 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HPAVJP_1730 rluD; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HPAVJP_1350 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D HPAVJP_3380 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HPAVJP_2820 hypothetical protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D HPAVJP_1610 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HPAVJP_1790 der; GTPase Der K03977 engA; GTPase
D HPAVJP_4890 ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D HPAVJP_2700 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D HPAVJP_4770 hypothetical protein K02834 rbfA; ribosome-binding factor A
D HPAVJP_2240 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D HPAVJP_5540 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:hvu03016]
D HPAVJP_4730 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HPAVJP_2460 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HPAVJP_1400 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HPAVJP_5830 metS; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HPAVJP_5480 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HPAVJP_0190 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HPAVJP_2610 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HPAVJP_3370 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HPAVJP_1970 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HPAVJP_2890 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HPAVJP_1180 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HPAVJP_0380 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HPAVJP_0930 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HPAVJP_1720 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HPAVJP_2290 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HPAVJP_2100 pheS2; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HPAVJP_2110 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HPAVJP_4640 tyrS2; tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HPAVJP_4480 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HPAVJP_1090 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HPAVJP_4110 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HPAVJP_4960 truA2; tRNA pseudouridine synthase A 2 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HPAVJP_4760 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HPAVJP_0060 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HPAVJP_5770 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HPAVJP_5950 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HPAVJP_5500 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HPAVJP_1360 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HPAVJP_2860 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D HPAVJP_2070 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D HPAVJP_3320 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HPAVJP_0140 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HPAVJP_1980 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HPAVJP_1950 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HPAVJP_0270 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:hvu03012]
D HPAVJP_4780 hypothetical protein K02519 infB; translation initiation factor IF-2
D HPAVJP_2150 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HPAVJP_4860 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D HPAVJP_0860 tufA2; elongation factor Tu K02358 tuf; elongation factor Tu
D HPAVJP_0830 fusA; elongation factor G K02355 fusA; elongation factor G
D HPAVJP_5910 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HPAVJP_4840 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor
D HPAVJP_5890 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HPAVJP_0120 spoVC; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HPAVJP_5050 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HPAVJP_2780 efp; elongation factor P K02356 efp; elongation factor P
C 03110 Chaperones and folding catalysts [BR:hvu03110]
D HPAVJP_3110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HPAVJP_3130 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D HPAVJP_3100 hypothetical protein K03687 GRPE; molecular chaperone GrpE
D HPAVJP_0160 hypothetical protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HPAVJP_0500 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
C 04131 Membrane trafficking [BR:hvu04131]
D HPAVJP_3870 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HPAVJP_3780 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:hvu03032]
D HPAVJP_1810 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HPAVJP_0010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HPAVJP_0250 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HPAVJP_2880 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HPAVJP_4540 hypothetical protein K03346 dnaB; replication initiation and membrane attachment protein
D HPAVJP_4530 hypothetical protein K11144 dnaI; primosomal protein DnaI
D HPAVJP_0220 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D HPAVJP_4580 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HPAVJP_4810 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HPAVJP_0020 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HPAVJP_0400 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HPAVJP_5850 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HPAVJP_0360 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HPAVJP_0350 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HPAVJP_2670 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HPAVJP_2660 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HPAVJP_4880 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hvu03036]
D HPAVJP_1280 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HPAVJP_1810 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HPAVJP_3130 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D HPAVJP_0010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HPAVJP_1290 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein
D HPAVJP_1490 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D HPAVJP_1500 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D HPAVJP_2520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HPAVJP_3470 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HPAVJP_2510 hypothetical protein K09772 sepF; cell division inhibitor SepF
D HPAVJP_5560 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D HPAVJP_5550 spo0J; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HPAVJP_2670 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HPAVJP_2660 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HPAVJP_5770 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HPAVJP_5710 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HPAVJP_1240 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
D HPAVJP_5440 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:hvu03400]
D HPAVJP_4560 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HPAVJP_2410 hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HPAVJP_2450 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D HPAVJP_5850 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HPAVJP_4300 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D HPAVJP_4360 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D HPAVJP_4220 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D HPAVJP_2010 pcrA; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HPAVJP_1020 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HPAVJP_1030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HPAVJP_5020 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HPAVJP_4580 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HPAVJP_4810 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HPAVJP_0020 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HPAVJP_0400 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HPAVJP_0220 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D HPAVJP_1910 recA; protein RecA K03553 recA; recombination protein RecA
D HPAVJP_0340 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HPAVJP_2180 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D HPAVJP_0410 hypothetical protein K06187 recR; recombination protein RecR
D HPAVJP_0650 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HPAVJP_0360 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HPAVJP_0350 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HPAVJP_4880 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HPAVJP_1810 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D HPAVJP_3520 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HPAVJP_4590 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:hvu03029]
D HPAVJP_4780 hypothetical protein K02519 infB; translation initiation factor IF-2
D HPAVJP_2150 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HPAVJP_4860 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D HPAVJP_0860 tufA2; elongation factor Tu K02358 tuf; elongation factor Tu
D HPAVJP_0830 fusA; elongation factor G K02355 fusA; elongation factor G
D HPAVJP_2190 era; GTPase Era K03595 era; GTPase
D HPAVJP_4640 tyrS2; tyrosine--tRNA ligase 2 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HPAVJP_1400 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HPAVJP_2610 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HPAVJP_2890 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D HPAVJP_5480 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HPAVJP_3300 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HPAVJP_3310 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HPAVJP_3290 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HPAVJP_0220 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D HPAVJP_3110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HPAVJP_3100 hypothetical protein K03687 GRPE; molecular chaperone GrpE
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hvu02000]
D HPAVJP_5730 hypothetical protein K23535 nupB; general nucleoside transport system permease protein
D HPAVJP_5720 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D HPAVJP_5740 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HPAVJP_2040 hypothetical protein K02037 pstC; phosphate transport system permease protein
D HPAVJP_2050 hypothetical protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HPAVJP_5410 hypothetical protein K15582 oppC; oligopeptide transport system permease protein
D HPAVJP_5400 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D HPAVJP_5420 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HPAVJP_4970 hypothetical protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D HPAVJP_4940 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D HPAVJP_4980 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HPAVJP_1120 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HPAVJP_1100 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HPAVJP_0180 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HPAVJP_2760 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HPAVJP_2120 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D HPAVJP_5690 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D HPAVJP_3630 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HPAVJP_3740 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HPAVJP_3730 ypqE; putative phosphotransferase enzyme IIA component YpqE K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_5880 hypothetical protein K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D HPAVJP_3880 PTS sugar transporter K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HPAVJP_5360 hypothetical protein K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D HPAVJP_3820 hypothetical protein K06188 aqpZ; aquaporin Z
D HPAVJP_1930 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D HPAVJP_2470 glpF2; glycerol transporter K02440 glpF; glycerol uptake facilitator
D HPAVJP_1140 hypothetical protein K10716 kch; voltage-gated potassium channel
D HPAVJP_0320 magnesium transporter MgtE K06213 mgtE; magnesium transporter
D HPAVJP_4510 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HPAVJP_5840 sodium transporter K03498 trkH; trk/ktr system potassium uptake protein
D HPAVJP_5680 ktrC; ktr system potassium uptake protein C K03499 trkA; trk/ktr system potassium uptake protein
D HPAVJP_2580 hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter
C 02044 Secretion system [BR:hvu02044]
D HPAVJP_0590 secA1; protein translocase subunit SecA 1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HPAVJP_0260 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D HPAVJP_5080 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HPAVJP_1320 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HPAVJP_1300 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
C 02042 Bacterial toxins [BR:hvu02042]
D HPAVJP_4510 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hvu04812]
D HPAVJP_2520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HPAVJP_3470 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HPAVJP_5560 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D HPAVJP_5550 spo0J; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hvu04147]
D HPAVJP_1150 eno1; enolase 1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HPAVJP_3870 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HPAVJP_3860 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HPAVJP_3780 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HPAVJP_3110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HPAVJP_3620 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HPAVJP_0860 tufA2; elongation factor Tu K02358 tuf; elongation factor Tu
D HPAVJP_1090 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HPAVJP_5070 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HPAVJP_2480 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HPAVJP_4160 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HPAVJP_3850 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:hvu02048]
D HPAVJP_0650 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D HPAVJP_0630 cas2-2; CRISPR-associated endoribonuclease Cas2 2 K09951 cas2; CRISPR-associated protein Cas2
D HPAVJP_0780 hypothetical protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D HPAVJP_2950 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HPAVJP_2520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HPAVJP_3470 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HPAVJP_2670 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HPAVJP_2660 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HPAVJP_3830 lactate dehydrogenase K25634 hgdH; 2-oxoglutarate reductase [EC:1.1.1.399]
D HPAVJP_5460 hypothetical protein K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HPAVJP_1600 tagatose-6-phosphate kinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D HPAVJP_1260 phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D HPAVJP_0300 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D HPAVJP_2690 hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D HPAVJP_0240 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D HPAVJP_0070 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HPAVJP_4460 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D HPAVJP_1050 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D HPAVJP_4680 degV; protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D HPAVJP_4690 fakB2; fatty acid kinase FakB2 K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D HPAVJP_1700 tig; trigger factor K03545 tig; trigger factor
D HPAVJP_0280 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
C 99994 Others
D HPAVJP_2060 hypothetical protein K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
C 99997 Function unknown
D HPAVJP_5490 HD family phosphohydrolase K06885 K06885; uncharacterized protein
D HPAVJP_1820 zinc metallopeptidase K06973 K06973; uncharacterized protein
D HPAVJP_1310 hypothetical protein K09787 K09787; uncharacterized protein
D HPAVJP_2640 membrane protein K09976 K09976; uncharacterized protein
D HPAVJP_3440 hypothetical protein K07584 ysxB; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024