+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Haloquadratum walsbyi C23

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D Hqrw_2878 nop5; rRNA/tRNA 2'-O-methyltransferase complex protein Nop5 K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs D Hqrw_1285 nop10; tRNA/rRNA pseudouridine synthase complex protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase C Kinase C Other 90S particles D Hqrw_3569 dim2; probable ribosome biogenesis protein Dim2 K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases D Hqrw_3924 rio1; RIO-type serine/threonine protein kinase Rio1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Hqrw_1497 rio2; RIO-type serine/threonine protein kinase Rio2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D Hqrw_3887 adk2; probable adenylate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D Hqrw_3680 probable 16S rRNA maturation protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] C Other pre-40S particles D Hqrw_1434 ABCE1 family ribosome recycling factor K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases D Hqrw_3681 probable GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein C RNases D RNase MRP E Hqrw_3222 rnp1; ribonuclease P protein component 1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E Hqrw_1615 rnp2; ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E Hqrw_1613 rnp3; ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases C Export and cytoplasmic maturation factors D Hqrw_3950 tif6; translation initiation factor aIF-6 K03264 EIF6; translation initiation factor 6 D Hqrw_3962 NMD3 family protein K07562 NMD3; 60S ribosomal export protein NMD3 D Hqrw_2813 SBDS family protein K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D Hqrw_3720 cdc48a; AAA-type ATPase (CDC48 subfamily) K13525 VCP; transitional endoplasmic reticulum ATPase D Hqrw_3067 cdc48b; AAA-type ATPase (CDC48 subfamily) K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles B Other ribosome biogenesis factors C Hqrw_4153 oapA; origin-associated GTP-binding protein OapA K03595 era; GTPase # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D Hqrw_2878 nop5; rRNA/tRNA 2'-O-methyltransferase complex protein Nop5 K14564 NOP56; nucleolar protein 56 D Hqrw_2877 fib; fibrillarin-like rRNA/tRNA 2'-O-methyltransferase K04795 flpA; fibrillarin-like pre-rRNA processing protein D Hqrw_3282 rpl8e; 50S ribosomal protein L8e K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D Hqrw_1603 gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1 K07569 gar1; RNA-binding protein D Hqrw_1285 nop10; tRNA/rRNA pseudouridine synthase complex protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors C Hqrw_3918 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D Hqrw_3275 ksgA; ribosome biogenesis protein KsgA, 16S rRNA-methylating K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] C 23S rRNA modification factors D Hqrw_4101 rlmE; 23S rRNA (uridine-2'-O-) methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors C Hqrw_3653 GNAT family acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C Hqrw_1464 ATP-grasp fold protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] C Hqrw_3165 DUF181 family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor B rRNA processing factors B rRNA helicases B GTPases C Hqrw_4153 oapA; origin-associated GTP-binding protein OapA K03595 era; GTPase C Hqrw_2585 hflX; ribosome-associating GTPase HflX K03665 hflX; GTPase B Other maturation factors C Hqrw_4123 yrdC; threonylcarbamoyl-AMP synthase YrdC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C Hqrw_2800 CRM domain protein K07574 yhbY; RNA-binding protein C Hqrw_2954 GTP-binding protein K06942 ychF; ribosome-binding ATPase C Hqrw_1473 aubA; RNA-binding protein AU-1 K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024