+D GENES KO
#
KEGG Orthology (KO) - Hymenobacter sp. DG25B
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hyd00010]
D PK28_17700 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PK28_03310 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PK28_11640 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PK28_04755 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PK28_09020 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PK28_14605 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PK28_05600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PK28_03995 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PK28_11420 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PK28_07395 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PK28_01360 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PK28_15470 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PK28_05555 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PK28_06340 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PK28_01945 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PK28_08535 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PK28_12835 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_04870 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PK28_05235 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PK28_09335 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PK28_16770 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PK28_07025 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PK28_12195 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PK28_10840 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:hyd00020]
D PK28_09710 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PK28_07065 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PK28_04925 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PK28_02240 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D PK28_00365 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PK28_09180 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PK28_00360 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_05070 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PK28_07290 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PK28_06975 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PK28_06970 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PK28_06980 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PK28_01750 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PK28_05915 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PK28_12325 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PK28_08200 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PK28_10840 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PK28_01945 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PK28_08535 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PK28_12835 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hyd00030]
D PK28_03310 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PK28_10090 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PK28_11575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PK28_11590 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PK28_16805 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PK28_08375 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PK28_16800 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PK28_01575 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PK28_15370 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PK28_12195 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PK28_11785 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PK28_05460 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PK28_17960 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PK28_04665 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PK28_07645 oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D PK28_00860 hypothetical protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D PK28_14605 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PK28_05600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PK28_09020 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PK28_11640 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PK28_04755 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:hyd00040]
D PK28_05755 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PK28_16760 araD; ribulose 5-phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D PK28_10090 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PK28_16755 arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
C 00051 Fructose and mannose metabolism [PATH:hyd00051]
D PK28_17850 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PK28_07240 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PK28_03310 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PK28_03765 phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PK28_14735 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PK28_07700 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PK28_07695 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PK28_11640 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PK28_04755 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PK28_09020 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PK28_14605 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PK28_05600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PK28_03995 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PK28_17855 glycosyl hydrolase family 32 K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D PK28_01575 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:hyd00052]
D PK28_16770 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PK28_07025 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PK28_07030 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PK28_07035 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PK28_02505 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PK28_12195 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PK28_17700 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PK28_17475 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PK28_15385 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PK28_16745 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PK28_11640 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PK28_04755 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PK28_17955 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D PK28_13435 glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:hyd00053]
D PK28_05755 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PK28_10170 epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PK28_16760 araD; ribulose 5-phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:hyd00500]
D PK28_13435 glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D PK28_04950 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PK28_00850 glycoside hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PK28_02075 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PK28_12975 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PK28_13450 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PK28_01460 hypothetical protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D PK28_00830 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D PK28_15425 hypothetical protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D PK28_17550 hypothetical protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D PK28_17675 alpha-glucosidase K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D PK28_12565 alpha-glucosidase K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D PK28_00900 hypothetical protein K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D PK28_01440 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D PK28_01445 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D PK28_11435 trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D PK28_12195 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PK28_17700 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PK28_03310 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PK28_17850 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PK28_07240 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hyd00520]
D PK28_07705 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D PK28_13370 beta-lactamase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PK28_05895 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PK28_13780 hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PK28_17850 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PK28_07240 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PK28_02065 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PK28_03810 N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D PK28_15450 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D PK28_08795 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PK28_11380 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PK28_02500 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D PK28_08405 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D PK28_08400 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PK28_02495 hexapeptide transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D PK28_02515 Vi polysaccharide biosynthesis protein VipB/TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45]
D PK28_08490 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PK28_16850 glycoside hydrolase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D PK28_04955 xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D PK28_17700 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PK28_12195 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PK28_05755 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PK28_07030 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PK28_07035 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PK28_02505 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PK28_15385 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PK28_10170 epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PK28_03310 hypothetical protein K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D PK28_03765 phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PK28_14735 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PK28_07700 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PK28_07695 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:hyd00620]
D PK28_09335 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PK28_01945 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PK28_08535 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PK28_12835 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_04870 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PK28_06540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PK28_06555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PK28_05555 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PK28_10890 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PK28_11305 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PK28_11310 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PK28_09975 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PK28_05415 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PK28_05235 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D PK28_06335 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PK28_04235 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PK28_06685 sulfurtransferase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PK28_07505 sulfurtransferase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D PK28_16245 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PK28_08200 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PK28_05915 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PK28_12325 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D PK28_01750 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PK28_10840 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PK28_06340 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PK28_13970 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hyd00630]
D PK28_13965 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D PK28_09335 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PK28_13970 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D PK28_05915 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PK28_09710 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D PK28_07065 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PK28_12070 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PK28_06090 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PK28_14170 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_14175 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_05670 catalase K03781 katE; catalase [EC:1.11.1.6]
D PK28_10710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PK28_01590 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PK28_00435 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PK28_14005 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_16260 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PK28_17960 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D PK28_04665 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:hyd00640]
D PK28_09335 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PK28_09330 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PK28_06540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PK28_06555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PK28_10435 tungsten formylmethanofuran dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_10890 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PK28_11305 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PK28_11310 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PK28_09975 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PK28_06090 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PK28_12070 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PK28_14170 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_14175 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_07290 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PK28_05070 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PK28_07350 aldehyde reductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:hyd00650]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PK28_00510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_02060 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_09765 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_03835 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_16185 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_06975 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PK28_06970 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PK28_06980 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PK28_09495 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PK28_13720 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PK28_13730 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
C 00660 C5-Branched dibasic acid metabolism
D PK28_07290 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PK28_05070 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:hyd00562]
D PK28_01640 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PK28_03995 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hyd00190]
D PK28_04620 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D PK28_04615 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D PK28_04610 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D PK28_04605 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D PK28_04600 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D PK28_04595 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D PK28_04585 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D PK28_04580 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D PK28_04575 NADH dehydrogenase K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D PK28_04545 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D PK28_04540 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D PK28_04530 NADH dehydrogenase K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D PK28_04525 NADH dehydrogenase K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D PK28_04660 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PK28_06975 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PK28_06970 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PK28_06980 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PK28_13830 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PK28_09570 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PK28_13825 cytochrome oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PK28_13820 cytochrome oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D PK28_13840 cytochrome C oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D PK28_13845 cytochrome C oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D PK28_13835 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PK28_00325 bifunctional cbb3-type cytochrome c oxidase subunit I/II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D PK28_00310 hypothetical protein K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PK28_03410 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PK28_05470 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PK28_03415 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PK28_03405 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PK28_05475 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PK28_03390 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PK28_03400 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PK28_03395 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PK28_03430 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PK28_14370 hypothetical protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PK28_02840 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D PK28_16560 hypothetical protein K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:hyd00710]
D PK28_07395 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PK28_11420 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PK28_14605 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PK28_05600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PK28_09020 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PK28_11575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PK28_11590 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PK28_16805 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PK28_01575 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D PK28_03995 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PK28_10090 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PK28_08375 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PK28_16800 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D PK28_10840 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D PK28_16245 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D PK28_05915 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:hyd00720]
D PK28_06340 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PK28_08200 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D PK28_05915 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PK28_01750 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PK28_06975 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D PK28_06970 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D PK28_06980 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D PK28_05070 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D PK28_07290 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PK28_04925 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PK28_07065 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D PK28_10890 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PK28_11305 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PK28_11310 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PK28_09975 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PK28_12070 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PK28_14170 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_14175 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_09685 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PK28_00880 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PK28_06555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PK28_06540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PK28_09335 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:hyd00680]
D PK28_01590 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PK28_15470 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PK28_05915 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PK28_14605 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D PK28_05600 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D PK28_09020 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PK28_11640 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PK28_04755 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D PK28_02150 CoB--CoM heterodisulfide reductase K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D PK28_06540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PK28_06555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PK28_09335 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PK28_06340 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D PK28_01360 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PK28_13525 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PK28_11255 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PK28_09090 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PK28_15930 phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D PK28_14000 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:hyd00910]
D PK28_07585 nitrite reductase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D PK28_17985 nitrous oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D PK28_02460 amino acid dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PK28_03850 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PK28_10710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PK28_01010 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:hyd00920]
D PK28_08435 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PK28_08440 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PK28_04415 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D PK28_08445 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D PK28_07460 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D PK28_05705 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PK28_05710 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PK28_16095 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PK28_13380 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hyd00061]
D PK28_10890 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PK28_11305 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PK28_11310 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PK28_09975 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PK28_03505 acyl carrier protein K02078 acpP; acyl carrier protein
D PK28_05565 acyl carrier protein K02078 acpP; acyl carrier protein
D PK28_06995 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PK28_03035 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PK28_09725 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PK28_15290 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PK28_05570 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PK28_12535 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PK28_02670 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_06535 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_06560 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_08195 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_09210 hydroxymyristoyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PK28_05960 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PK28_08915 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D PK28_07300 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PK28_03825 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:hyd00071]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PK28_03840 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_03835 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PK28_15055 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PK28_07300 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PK28_03825 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:hyd00074]
D PK28_03505 acyl carrier protein K02078 acpP; acyl carrier protein
D PK28_05565 acyl carrier protein K02078 acpP; acyl carrier protein
D PK28_06995 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PK28_08915 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hyd00561]
D PK28_04870 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D PK28_11290 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PK28_04020 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PK28_01760 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PK28_01420 hypothetical protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D PK28_16745 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:hyd00564]
D PK28_10355 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PK28_04020 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PK28_01760 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PK28_01925 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PK28_02455 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PK28_04230 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PK28_02465 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:hyd00600]
D PK28_07220 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D PK28_17475 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PK28_16745 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PK28_13780 hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D PK28_10935 aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
C 00591 Linoleic acid metabolism
D PK28_13650 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:hyd00592]
D PK28_03840 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:hyd01040]
D PK28_14340 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PK28_08915 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D PK28_01475 GDSL family lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hyd00230]
D PK28_12195 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PK28_11785 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PK28_05460 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PK28_00040 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PK28_00050 hypothetical protein K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PK28_00070 phosphoribosylformylglycinamidine synthase K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D PK28_00035 hypothetical protein K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PK28_11900 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PK28_11895 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PK28_06495 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PK28_00060 hypothetical protein K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PK28_13160 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PK28_04340 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PK28_14155 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PK28_06610 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PK28_05810 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PK28_15105 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PK28_04420 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PK28_14905 deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PK28_07930 xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D PK28_07925 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D PK28_08365 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PK28_08510 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PK28_15740 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PK28_01135 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PK28_01125 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PK28_08355 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D PK28_13235 MFS transporter K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PK28_15410 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PK28_13220 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PK28_06295 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PK28_07965 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D PK28_05085 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D PK28_05815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PK28_01680 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PK28_01690 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D PK28_08435 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PK28_08440 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:hyd00240]
D PK28_05280 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PK28_11910 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PK28_05285 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PK28_11905 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PK28_11890 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PK28_00085 hypothetical protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D PK28_04065 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D PK28_00075 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PK28_00080 hypothetical protein K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PK28_15725 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PK28_04420 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PK28_10330 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D PK28_13540 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PK28_14910 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D PK28_14155 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PK28_09145 phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D PK28_04110 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PK28_09065 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D PK28_11055 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PK28_08335 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D PK28_01135 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PK28_01125 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PK28_06295 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D PK28_16195 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PK28_10550 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PK28_09055 malonic semialdehyde reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hyd00250]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_07865 1-alkyl-2-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PK28_14550 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PK28_05750 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PK28_16520 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D PK28_09270 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PK28_06730 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D PK28_05300 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PK28_05320 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PK28_13220 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PK28_13160 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PK28_02460 amino acid dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PK28_03850 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PK28_04630 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D PK28_10710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PK28_05280 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PK28_11910 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PK28_05285 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PK28_11905 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PK28_02065 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PK28_00040 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hyd00260]
D PK28_09015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PK28_12580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PK28_16035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PK28_16100 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PK28_05350 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PK28_12695 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D PK28_01590 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PK28_01360 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D PK28_13525 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PK28_11255 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PK28_09090 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PK28_09055 malonic semialdehyde reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D PK28_09980 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PK28_00435 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PK28_14005 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_16260 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D PK28_04230 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D PK28_05075 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PK28_03455 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PK28_10370 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PK28_08135 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PK28_08130 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:hyd00270]
D PK28_05705 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PK28_05710 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D PK28_05075 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D PK28_00875 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PK28_15980 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PK28_15920 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PK28_02480 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PK28_15775 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PK28_09015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PK28_12580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PK28_16035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PK28_16100 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PK28_16095 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D PK28_16090 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PK28_10530 hypothetical protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_14065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_05915 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D PK28_03455 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PK28_10370 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D PK28_13525 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PK28_11255 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PK28_09090 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hyd00280]
D PK28_10530 hypothetical protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_14065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_02225 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D PK28_10435 tungsten formylmethanofuran dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_03840 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PK28_06090 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D PK28_12070 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D PK28_14170 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_14175 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_14305 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D PK28_06775 methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D PK28_09495 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PK28_13720 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D PK28_13730 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hyd00290]
D PK28_10530 hypothetical protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_14065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_02225 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:hyd00300]
D PK28_16100 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PK28_09015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PK28_12580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PK28_16035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PK28_09510 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PK28_13585 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PK28_09755 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D PK28_05290 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PK28_15400 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PK28_01715 hypothetical protein K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PK28_12585 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PK28_06880 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PK28_16530 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PK28_03585 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:hyd00310]
D PK28_15335 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D PK28_09180 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PK28_00360 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_15055 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:hyd00220]
D PK28_05300 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PK28_05320 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PK28_13125 arginase K01476 rocF; arginase [EC:3.5.3.1]
D PK28_10710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PK28_05280 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PK28_11910 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PK28_05285 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PK28_11905 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PK28_02460 amino acid dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PK28_03850 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_05310 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D PK28_05295 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D PK28_05290 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PK28_05315 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:hyd00330]
D PK28_11055 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PK28_13130 decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D PK28_08780 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D PK28_15920 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D PK28_15395 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D PK28_12445 hypothetical protein K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D PK28_12785 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PK28_13125 arginase K01476 rocF; arginase [EC:3.5.3.1]
D PK28_00675 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D PK28_09380 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PK28_06055 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D PK28_04630 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D PK28_12475 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PK28_12900 hypothetical protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:hyd00340]
D PK28_10115 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D PK28_10155 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D PK28_10145 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D PK28_10140 hisH; imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D PK28_10150 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D PK28_10135 imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D PK28_10125 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PK28_10120 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D PK28_08620 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D PK28_12430 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D PK28_12295 hypothetical protein K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D PK28_12240 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:hyd00350]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_10125 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PK28_12190 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PK28_00785 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PK28_09340 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
C 00360 Phenylalanine metabolism [PATH:hyd00360]
D PK28_08145 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PK28_08150 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PK28_11965 paaA; ATPase AAA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D PK28_11970 phenylacetic acid degradation b K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D PK28_11975 phenylacetate-CoA oxygenase K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D PK28_11980 phenylacetate-CoA oxygenase K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D PK28_16480 hypothetical protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D PK28_12000 oxidoreductase K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D PK28_02775 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_00510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_02060 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_09765 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_10125 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PK28_12190 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PK28_12785 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:hyd00380]
D PK28_10375 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D PK28_02715 kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D PK28_02690 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D PK28_02675 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D PK28_02600 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D PK28_15270 2-aminomuconate deaminase K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D PK28_09180 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PK28_00360 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_15055 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PK28_12785 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PK28_05670 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hyd00400]
D PK28_08140 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D PK28_06065 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PK28_07615 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D PK28_09095 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D PK28_00530 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D PK28_06070 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D PK28_14965 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D PK28_08105 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PK28_03650 para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PK28_08110 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PK28_08115 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D PK28_10070 hypothetical protein K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PK28_01395 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D PK28_08120 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D PK28_08135 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D PK28_08130 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D PK28_01705 cytochrome C4 K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D PK28_06060 cytochrome C4 K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D PK28_01710 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PK28_01720 chorismate mutase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_10125 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PK28_08145 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PK28_08150 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:hyd00410]
D PK28_02085 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D PK28_02080 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00430 Taurine and hypotaurine metabolism [PATH:hyd00430]
D PK28_17820 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PK28_13455 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PK28_09270 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D PK28_06555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PK28_06540 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D PK28_11670 hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:hyd00450]
D PK28_00875 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PK28_14645 ferredoxin-NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PK28_09960 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PK28_08435 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PK28_08440 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PK28_03625 hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PK28_05440 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:hyd00460]
D PK28_04950 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PK28_00850 glycoside hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D PK28_17820 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PK28_13455 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PK28_07865 1-alkyl-2-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PK28_14550 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PK28_01590 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hyd00470]
D PK28_03585 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PK28_07385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PK28_12165 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PK28_06890 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PK28_15400 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PK28_12585 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:hyd00480]
D PK28_17820 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PK28_13455 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PK28_11265 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PK28_02950 peptidase M1 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PK28_15715 alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PK28_04925 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D PK28_13110 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D PK28_15920 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:hyd00511]
D PK28_17475 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PK28_13780 hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PK28_17805 glycosylasparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D PK28_07220 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:hyd00540]
D PK28_09205 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PK28_09210 hydroxymyristoyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PK28_09215 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PK28_14795 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PK28_13275 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PK28_10760 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PK28_14730 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PK28_13615 2-dehydro-3-deoxyphosphogluconate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PK28_04295 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PK28_11400 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PK28_08990 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PK28_06120 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PK28_04075 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PK28_06480 carbohydrate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D PK28_13135 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PK28_02095 hypothetical protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D PK28_13295 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PK28_15615 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D PK28_15755 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:hyd00542]
D PK28_03325 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hyd00541]
D PK28_02505 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PK28_15385 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PK28_05755 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D PK28_10170 epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D PK28_02520 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_16200 nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_03195 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_02510 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PK28_05760 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PK28_07675 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PK28_16535 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PK28_05210 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PK28_14865 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PK28_10320 TDP-4-oxo-6-deoxy-D-glucose aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D PK28_14720 hypothetical protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D PK28_03765 phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D PK28_14735 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D PK28_07700 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D PK28_07695 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D PK28_08490 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D PK28_02500 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D PK28_08405 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D PK28_08400 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PK28_02495 hexapeptide transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D PK28_02515 Vi polysaccharide biosynthesis protein VipB/TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45]
C 00550 Peptidoglycan biosynthesis [PATH:hyd00550]
D PK28_08795 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PK28_11380 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PK28_06905 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PK28_07385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PK28_06890 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PK28_06880 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PK28_16530 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PK28_03585 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PK28_03690 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PK28_13705 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PK28_10455 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PK28_06885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PK28_06900 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PK28_09825 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PK28_03370 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PK28_14395 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PK28_05260 glycosyl transferase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PK28_04365 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PK28_13535 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:hyd00552]
D PK28_13705 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PK28_10455 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PK28_03325 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PK28_07660 glycosyl transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D PK28_03325 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:hyd00543]
D PK28_03325 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PK28_07310 hypothetical protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D PK28_05705 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D PK28_05825 hypothetical protein K13665 gumL; pyruvyltransferase
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hyd00730]
D PK28_12075 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_03770 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_16070 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PK28_11955 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D PK28_08985 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PK28_05815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:hyd00740]
D PK28_09385 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PK28_02485 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PK28_01955 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D PK28_10465 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D PK28_13715 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:hyd00750]
D PK28_10310 pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D PK28_09635 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D PK28_09090 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PK28_03635 pyridoxamine 5'-phosphate oxidase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D PK28_05350 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hyd00760]
D PK28_01350 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D PK28_06610 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D PK28_14155 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D PK28_15735 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PK28_05580 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D PK28_06260 decaheme cytochrome c MtrA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D PK28_12315 isochorismatase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D PK28_08730 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PK28_03670 ppnK; inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:hyd00770]
D PK28_14325 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D PK28_02080 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D PK28_01970 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D PK28_05945 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PK28_12670 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PK28_02260 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PK28_14275 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D PK28_10610 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D PK28_10530 hypothetical protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_14065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_02085 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:hyd00780]
D PK28_05570 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PK28_12535 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PK28_02670 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_06535 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_06560 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_08195 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_05960 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PK28_12520 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PK28_12530 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PK28_12525 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D PK28_14760 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:hyd00785]
D PK28_03315 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D PK28_00450 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_01945 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PK28_08535 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PK28_12835 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PK28_00365 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D PK28_09180 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PK28_00360 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D PK28_10435 tungsten formylmethanofuran dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D PK28_00435 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D PK28_14005 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PK28_16260 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:hyd00790]
D PK28_14385 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D PK28_13365 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PK28_14255 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D PK28_07005 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D PK28_00550 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D PK28_12025 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PK28_10055 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D PK28_09385 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D PK28_10785 hypothetical protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D PK28_14380 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PK28_13280 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PK28_01620 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PK28_08145 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PK28_08150 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D PK28_09690 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PK28_00960 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PK28_00980 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D PK28_00970 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PK28_00985 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D PK28_07940 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D PK28_00975 molybdenum cofactor biosynthesis protein MoaC K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:hyd00670]
D PK28_12025 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PK28_09685 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PK28_01590 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PK28_04340 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PK28_12020 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PK28_14005 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D PK28_00875 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D PK28_10550 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PK28_00880 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PK28_00615 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hyd00860]
D PK28_02040 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PK28_02415 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D PK28_08345 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PK28_00690 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PK28_14880 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D PK28_03335 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D PK28_06485 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PK28_10450 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D PK28_13140 hypothetical protein K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D PK28_03785 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D PK28_13830 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PK28_13835 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PK28_14060 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PK28_08950 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hyd00130]
D PK28_09045 ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PK28_12850 chorismate-binding protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
D PK28_12855 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D PK28_12230 chloromuconate cycloisomerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PK28_12875 hypothetical protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D PK28_12860 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D PK28_12845 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PK28_13105 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PK28_12190 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hyd00900]
D PK28_16070 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PK28_14120 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D PK28_02780 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D PK28_05500 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PK28_03480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D PK28_10675 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D PK28_05105 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PK28_06815 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PK28_00775 hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D PK28_01905 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PK28_07015 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PK28_03690 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:hyd00906]
D PK28_06805 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PK28_06800 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D PK28_02805 hypothetical protein K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D PK28_06820 fatty acid desaturase K09836 crtW; beta-carotene/zeaxanthin 4-ketolase [EC:1.14.99.63 1.14.99.64]
D PK28_06780 fatty acid hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
D PK28_01500 phytoene dehydrogenase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:hyd00907]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_09495 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D PK28_03840 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D PK28_11575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PK28_11590 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D PK28_16805 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:hyd00523]
D PK28_02520 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_16200 nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_03195 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_02510 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PK28_05760 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PK28_07675 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PK28_16535 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PK28_05210 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PK28_14865 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D PK28_12850 chorismate-binding protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D PK28_02510 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PK28_05760 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:hyd00946]
D PK28_04950 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PK28_00850 glycoside hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PK28_03010 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:hyd00261]
D PK28_08435 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D PK28_08440 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D PK28_09015 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PK28_12580 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PK28_16035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PK28_09510 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PK28_13585 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hyd00521]
D PK28_17700 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PK28_12195 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PK28_01640 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PK28_02520 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_16200 nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_03195 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_02510 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PK28_05760 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PK28_07675 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PK28_16535 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D PK28_05210 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PK28_14865 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PK28_17700 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:hyd00525]
D PK28_02520 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_16200 nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_03195 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D PK28_02510 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D PK28_05760 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:hyd00401]
D PK28_01710 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_10125 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D PK28_08105 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PK28_03650 para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PK28_08110 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D PK28_06995 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PK28_02670 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_06535 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_06560 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_08195 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_05960 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PK28_03505 acyl carrier protein K02078 acpP; acyl carrier protein
D PK28_05565 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hyd00999]
D PK28_15980 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PK28_04950 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D PK28_00850 glycoside hydrolase family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:hyd00362]
D PK28_03840 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D PK28_02600 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D PK28_04285 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D PK28_04380 hypothetical protein K04755 fdx; ferredoxin, 2Fe-2S
D PK28_14650 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D PK28_03835 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D PK28_15055 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D PK28_00510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_02060 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_09765 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:hyd00627]
D PK28_12785 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PK28_05415 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:hyd00364]
D PK28_11500 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PK28_06005 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PK28_08175 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hyd00361]
D PK28_11500 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PK28_06005 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PK28_08175 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:hyd00623]
D PK28_11500 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PK28_06005 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D PK28_08175 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D PK28_02600 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
C 00633 Nitrotoluene degradation [PATH:hyd00633]
D PK28_04430 NADH:flavin oxidoreductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D PK28_03840 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:hyd00643]
D PK28_00785 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D PK28_09340 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PK28_12785 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D PK28_09005 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hyd03020]
D PK28_15655 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PK28_15650 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PK28_15480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hyd03010]
D PK28_15205 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PK28_15580 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PK28_15485 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PK28_15525 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PK28_13880 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PK28_15630 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PK28_15540 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PK28_15200 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PK28_15620 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PK28_15490 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PK28_15635 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PK28_15495 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PK28_15545 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PK28_09945 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PK28_14345 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PK28_15565 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PK28_13885 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PK28_15590 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PK28_05545 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PK28_15965 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PK28_15670 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PK28_15595 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PK28_15610 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PK28_15605 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PK28_15550 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PK28_15535 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PK28_15660 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PK28_13890 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PK28_15665 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PK28_15675 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PK28_15195 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PK28_15560 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PK28_15515 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PK28_15575 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PK28_15475 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PK28_15530 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PK28_14360 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PK28_09920 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PK28_01120 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PK28_15600 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PK28_15555 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PK28_05450 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PK28_01115 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PK28_00655 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PK28_15570 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PK28_15520 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PK28_14900 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PK28_11285 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PK28_00640 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PK28_04150 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PK28_09915 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PK28_04190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PK28_13215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PK28_04205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PK28_13200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PK28_13195 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PK28_04210 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hyd00970]
D PK28_05715 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PK28_04200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PK28_13205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PK28_07280 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PK28_08680 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PK28_14640 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PK28_16590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PK28_00520 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PK28_10895 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PK28_13635 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PK28_05465 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PK28_11425 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PK28_11430 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PK28_16315 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PK28_15850 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PK28_15705 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PK28_04125 tRNA-His K14226 tRNA-His; tRNA His
D PK28_04195 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PK28_13210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PK28_11685 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_13240 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_16310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_06400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_06740 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_11925 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PK28_07415 tRNA-Met K14230 tRNA-Met; tRNA Met
D PK28_01065 tRNA-Met K14230 tRNA-Met; tRNA Met
D PK28_09930 tRNA-Met K14230 tRNA-Met; tRNA Met
D PK28_02140 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PK28_02205 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PK28_02200 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PK28_08675 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PK28_07870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PK28_06150 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PK28_06145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PK28_08670 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PK28_15700 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PK28_10210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PK28_03530 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PK28_15690 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PK28_15710 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PK28_02380 tRNA-Val K14237 tRNA-Val; tRNA Val
D PK28_00145 tRNA-Val K14237 tRNA-Val; tRNA Val
D PK28_02040 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PK28_16235 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PK28_10500 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PK28_14045 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PK28_10515 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PK28_04470 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PK28_02735 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PK28_01865 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PK28_09905 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PK28_14425 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PK28_16125 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PK28_05440 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PK28_12020 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PK28_09165 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PK28_10630 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PK28_01880 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PK28_06030 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PK28_13120 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PK28_02565 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PK28_08625 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PK28_00505 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PK28_05030 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PK28_09990 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PK28_13015 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hyd03060]
D PK28_15510 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PK28_15685 preprotein translocase K03073 secE; preprotein translocase subunit SecE
D PK28_10810 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PK28_02250 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PK28_13545 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PK28_15375 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PK28_08505 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PK28_00635 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PK28_16225 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PK28_01580 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D PK28_13590 aminodeoxychorismate synthase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PK28_01890 signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hyd04122]
D PK28_12075 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_03770 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_00970 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D PK28_00960 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D PK28_00945 hypothetical protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D PK28_00980 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
C 03018 RNA degradation [PATH:hyd03018]
D PK28_15470 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PK28_09950 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PK28_04120 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PK28_10915 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PK28_13045 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PK28_07330 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PK28_14725 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PK28_14420 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PK28_05045 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PK28_11640 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PK28_06515 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PK28_10825 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PK28_16560 hypothetical protein K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PK28_12060 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hyd03030]
D PK28_09870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PK28_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PK28_04935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PK28_14885 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PK28_09995 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PK28_08320 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PK28_11530 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PK28_09360 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PK28_11605 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_10950 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PK28_09080 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PK28_14025 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PK28_03125 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PK28_09550 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hyd03410]
D PK28_05380 Fe-S cluster assembly protein HesB K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PK28_14585 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PK28_03915 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PK28_13595 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PK28_03880 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PK28_15795 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PK28_11465 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PK28_12710 Fe-S cluster assembly protein HesB K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PK28_01810 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PK28_03125 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PK28_02000 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PK28_09550 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hyd03420]
D PK28_16385 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PK28_02750 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PK28_03975 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PK28_11840 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PK28_15890 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PK28_03365 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PK28_17610 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PK28_08805 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PK28_03125 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PK28_09550 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:hyd03430]
D PK28_16320 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PK28_11385 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D PK28_05900 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PK28_17610 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PK28_08805 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PK28_02000 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PK28_11605 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_10950 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PK28_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PK28_08320 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PK28_04935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PK28_09995 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PK28_14885 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PK28_09870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PK28_09550 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:hyd03440]
D PK28_02000 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PK28_11605 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_10950 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PK28_01940 DNA recombination protein RecF K03629 recF; DNA replication and repair protein RecF
D PK28_04395 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D PK28_06465 recombinase RecR K06187 recR; recombination protein RecR
D PK28_03125 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PK28_16250 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PK28_15025 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PK28_07795 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PK28_03865 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PK28_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PK28_08320 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PK28_04935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PK28_09995 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PK28_14885 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PK28_09870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PK28_13905 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hyd02010]
D PK28_08265 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PK28_12730 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PK28_11750 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PK28_08260 phosphonate ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PK28_11745 organic solvent ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PK28_07885 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D PK28_01050 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D PK28_01555 releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PK28_17620 ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D PK28_12010 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D PK28_17625 ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PK28_07315 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PK28_04255 ABC transporter permease K02195 ccmC; heme exporter protein C
D PK28_04250 ABC transporter permease K02194 ccmB; heme exporter protein B
D PK28_09940 permease K07091 lptF; lipopolysaccharide export system permease protein
D PK28_05510 permease K11720 lptG; lipopolysaccharide export system permease protein
D PK28_02015 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PK28_18010 hypothetical protein K19341 nosY; Cu-processing system permease protein
D PK28_18005 hypothetical protein K19340 nosF; Cu-processing system ATP-binding protein
D PK28_13695 cell division protein K09811 ftsX; cell division transport system permease protein
D PK28_08385 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PK28_04085 antibiotic ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PK28_02190 antibiotic ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:hyd03070]
D PK28_02960 hypothetical protein K12340 tolC; outer membrane protein
D PK28_03490 hypothetical protein K12340 tolC; outer membrane protein
D PK28_15685 preprotein translocase K03073 secE; preprotein translocase subunit SecE
D PK28_10810 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PK28_15510 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PK28_02250 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PK28_13545 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PK28_15375 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PK28_00635 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PK28_08505 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PK28_16225 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PK28_01580 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hyd02020]
D PK28_15175 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PK28_15170 ArsR family transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PK28_09325 transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PK28_13365 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D PK28_02865 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PK28_15340 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D PK28_18275 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D PK28_18265 metal transporter K07787 cusA; copper/silver efflux system protein
D PK28_13835 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PK28_14150 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PK28_08645 hypothetical protein K19611 fepA; ferric enterobactin receptor
D PK28_12930 hypothetical protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PK28_06710 hypothetical protein K11618 liaR; two-component system, NarL family, response regulator LiaR
D PK28_10710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PK28_02730 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PK28_15870 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D PK28_08770 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PK28_15875 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PK28_10240 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PK28_11665 histidine kinase K11443 divK; two-component system, cell cycle response regulator DivK
D PK28_11775 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PK28_08315 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PK28_00325 bifunctional cbb3-type cytochrome c oxidase subunit I/II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D PK28_00310 hypothetical protein K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D PK28_02960 hypothetical protein K12340 tolC; outer membrane protein
D PK28_03490 hypothetical protein K12340 tolC; outer membrane protein
D PK28_07750 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D PK28_07745 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D PK28_13125 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hyd02024]
D PK28_08105 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D PK28_03650 para-aminobenzoate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PK28_08110 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D PK28_00890 hypothetical protein K20276 bapA; large repetitive protein
D PK28_07300 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PK28_03825 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PK28_11775 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PK28_08315 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PK28_02485 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D PK28_17500 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D PK28_07420 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D PK28_14685 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PK28_00535 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PK28_07815 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PK28_01895 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PK28_13545 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PK28_15685 preprotein translocase K03073 secE; preprotein translocase subunit SecE
D PK28_10810 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PK28_15510 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PK28_02250 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PK28_15375 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PK28_00635 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PK28_08505 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hyd02030]
D PK28_08770 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PK28_08775 hypothetical protein K03410 cheC; chemotaxis protein CheC
D PK28_15875 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PK28_10240 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PK28_15870 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D PK28_14610 hypothetical protein K02557 motB; chemotaxis protein MotB
D PK28_09470 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:hyd02040]
D PK28_14610 hypothetical protein K02557 motB; chemotaxis protein MotB
D PK28_09470 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D PK28_18145 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D PK28_09955 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D PK28_02730 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PK28_15470 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:hyd04980]
D PK28_14060 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D PK28_14230 protein kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D PK28_14170 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_14175 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D PK28_00875 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hyd01501]
D PK28_13370 beta-lactamase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PK28_05895 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D PK28_02990 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PK28_14250 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PK28_01205 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PK28_17490 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_06190 transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_06185 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D PK28_17500 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D PK28_07420 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D PK28_02960 hypothetical protein K12340 tolC; outer membrane protein
D PK28_03490 hypothetical protein K12340 tolC; outer membrane protein
D PK28_03370 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PK28_14395 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PK28_04365 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:hyd01502]
D PK28_07385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PK28_03585 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PK28_16530 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PK28_06885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PK28_06900 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hyd01503]
D PK28_14315 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PK28_02865 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PK28_15340 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D PK28_17490 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_06190 transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_06185 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D PK28_02960 hypothetical protein K12340 tolC; outer membrane protein
D PK28_03490 hypothetical protein K12340 tolC; outer membrane protein
D PK28_09205 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hyd01000]
C 01001 Protein kinases [BR:hyd01001]
D PK28_07380 penicillin-binding protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PK28_15120 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PK28_07745 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PK28_15175 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PK28_06210 hypothetical protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PK28_08700 hypothetical protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PK28_12930 hypothetical protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PK28_12905 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PK28_08770 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PK28_13095 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS
C 01009 Protein phosphatases and associated proteins [BR:hyd01009]
D PK28_15775 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PK28_11640 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PK28_03295 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:hyd01002]
D PK28_01890 signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PK28_08365 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PK28_13670 hypothetical protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D PK28_03515 hypothetical protein K13695 nlpC; probable lipoprotein NlpC
D PK28_05730 hypothetical protein K13695 nlpC; probable lipoprotein NlpC
D PK28_00040 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PK28_02065 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PK28_05750 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PK28_00160 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D PK28_10930 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D PK28_10935 aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
D PK28_02950 peptidase M1 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PK28_15715 alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PK28_11185 peptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D PK28_11995 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D PK28_00740 hypothetical protein K01400 nprE; bacillolysin [EC:3.4.24.28]
D PK28_01215 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PK28_01220 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PK28_06230 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PK28_03075 metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PK28_00840 peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D PK28_04215 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D PK28_11265 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D PK28_15505 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PK28_14480 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PK28_00650 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PK28_14770 peptidase M41 K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D PK28_09805 peptidase M48 Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PK28_09840 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D PK28_12880 dihydrofolate reductase K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D PK28_14115 peptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PK28_02990 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PK28_11180 phenylalanyl-tRNA synthetase subunit alpha K09933 mtfA; MtfA peptidase
D PK28_02865 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PK28_15340 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D PK28_09475 hypothetical protein K17734 aprX; serine protease AprX [EC:3.4.21.-]
D PK28_03240 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D PK28_09170 protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D PK28_13535 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PK28_13250 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PK28_14100 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D PK28_18045 umuDC operon-like protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PK28_07095 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PK28_17340 umuDC operon-like protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PK28_13590 aminodeoxychorismate synthase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PK28_12475 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PK28_12900 hypothetical protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PK28_05200 alpha/beta hydrolase K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-]
D PK28_06040 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PK28_00790 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D PK28_03010 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D PK28_06605 signal peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D PK28_09500 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D PK28_10940 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D PK28_05905 hypothetical protein K07059 K07059; rhomboid family protein
D PK28_05910 rhomboid family protein K07059 K07059; rhomboid family protein
D PK28_16110 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PK28_12830 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D PK28_14550 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D PK28_17820 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PK28_13455 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D PK28_02920 TldD protein K03568 tldD; TldD protein
D PK28_02935 TldD protein K03568 tldD; TldD protein
D PK28_05330 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:hyd01003]
D PK28_13145 dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D PK28_01420 hypothetical protein K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336]
D PK28_02075 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D PK28_09825 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PK28_05260 glycosyl transferase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PK28_03370 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PK28_14395 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PK28_07660 glycosyl transferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D PK28_03325 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D PK28_11435 trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hyd01005]
D PK28_09205 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D PK28_13275 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D PK28_09210 hydroxymyristoyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PK28_09215 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D PK28_14795 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D PK28_10760 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D PK28_06120 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D PK28_08990 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D PK28_13615 2-dehydro-3-deoxyphosphogluconate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D PK28_11400 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D PK28_04295 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D PK28_14730 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D PK28_06480 carbohydrate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D PK28_02095 hypothetical protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D PK28_15615 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D PK28_15755 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D PK28_04075 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D PK28_13135 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D PK28_13295 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D PK28_10315 b-glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PK28_02620 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D PK28_03325 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hyd01011]
D PK28_08795 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PK28_11380 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PK28_06905 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PK28_07385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PK28_06890 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PK28_06880 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D PK28_03585 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D PK28_12165 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PK28_16110 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D PK28_06885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PK28_06900 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PK28_13705 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PK28_10455 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D PK28_03370 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PK28_14395 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PK28_05260 glycosyl transferase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D PK28_04365 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D PK28_13535 hypothetical protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D PK28_09825 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D PK28_10930 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D PK28_06130 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PK28_13980 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D PK28_03020 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PK28_01300 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D PK28_14315 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hyd01004]
D PK28_06995 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PK28_03035 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PK28_09725 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PK28_15290 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PK28_05570 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PK28_12535 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PK28_02670 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_06535 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_06560 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_08195 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PK28_09210 hydroxymyristoyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D PK28_05960 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PK28_01475 GDSL family lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D PK28_14340 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D PK28_08915 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D PK28_13650 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D PK28_09335 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D PK28_09330 prpE; propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D PK28_07300 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PK28_03825 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PK28_11290 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PK28_04020 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins [BR:hyd01008]
C 01006 Prenyltransferases [BR:hyd01006]
D PK28_01905 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PK28_07015 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D PK28_03690 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PK28_06805 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D PK28_11650 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PK28_13105 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PK28_13830 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:hyd01007]
D PK28_02040 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PK28_09990 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PK28_13015 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PK28_16125 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PK28_13120 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PK28_05440 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PK28_01880 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PK28_09165 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PK28_10630 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PK28_06030 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PK28_04470 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PK28_02735 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PK28_08625 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PK28_01865 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PK28_14425 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PK28_02565 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PK28_09905 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PK28_10515 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PK28_00505 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PK28_05030 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PK28_04885 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_09250 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_06475 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_12245 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D PK28_16515 aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D PK28_01715 hypothetical protein K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D PK28_10125 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D PK28_09980 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D PK28_12520 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D PK28_00675 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D PK28_05290 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D PK28_12530 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D PK28_08345 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D PK28_10530 hypothetical protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_14065 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D PK28_09090 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D PK28_08400 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D PK28_10320 TDP-4-oxo-6-deoxy-D-glucose aminotransferase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hyd00194]
D PK28_16545 hypothetical protein K08906 petJ; cytochrome c6
D PK28_05475 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PK28_05470 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PK28_03415 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PK28_03410 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PK28_03405 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PK28_03400 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PK28_03395 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PK28_03390 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PK28_03380 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hyd03000]
D PK28_02110 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D PK28_13480 hypothetical protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D PK28_10000 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D PK28_15815 hypothetical protein K07506 K07506; AraC family transcriptional regulator
D PK28_18510 hypothetical protein K07506 K07506; AraC family transcriptional regulator
D PK28_10870 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PK28_15240 hypothetical protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D PK28_16825 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PK28_17685 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D PK28_11960 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D PK28_14545 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D PK28_07365 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PK28_03830 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D PK28_06785 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D PK28_08230 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D PK28_13230 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D PK28_11775 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PK28_08315 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D PK28_10105 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PK28_00920 hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D PK28_04435 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PK28_04650 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D PK28_07515 ArsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D PK28_04480 ArsR family transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D PK28_13975 hypothetical protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D PK28_12050 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D PK28_09720 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D PK28_14250 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PK28_01205 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PK28_14760 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PK28_11275 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PK28_02955 hypothetical protein K15836 fhlA; formate hydrogenlyase transcriptional activator
D PK28_13570 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PK28_10305 hypothetical protein K07735 algH; putative transcriptional regulator
D PK28_01960 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D PK28_06860 protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hyd03021]
D PK28_15480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PK28_15655 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PK28_15650 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PK28_18145 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D PK28_09955 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D PK28_05845 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PK28_11155 DNA-directed RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PK28_05525 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PK28_05585 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PK28_11615 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D PK28_02730 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D PK28_16145 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PK28_02230 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D PK28_15680 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PK28_07820 serine/threonine protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D PK28_13225 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D PK28_15115 anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D PK28_12995 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D PK28_15120 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D PK28_01960 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D PK28_11250 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PK28_04805 GreA/GreB family elongation factor K04760 greB; transcription elongation factor GreB
D PK28_14420 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PK28_02740 hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:hyd03019]
D PK28_03895 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PK28_05575 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PK28_05045 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PK28_04120 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PK28_10915 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PK28_13045 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D PK28_07330 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PK28_14725 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PK28_15470 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PK28_09950 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D PK28_14420 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D PK28_11640 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D PK28_06515 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PK28_10825 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PK28_16560 hypothetical protein K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PK28_12060 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D PK28_15100 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:hyd03011]
D PK28_15205 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PK28_15580 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PK28_15485 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PK28_15525 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PK28_13880 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PK28_15630 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PK28_15540 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PK28_15200 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PK28_15620 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PK28_15490 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PK28_15635 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PK28_15495 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PK28_15545 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PK28_09945 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PK28_14345 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PK28_15565 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PK28_13885 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PK28_15590 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PK28_05545 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PK28_15965 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PK28_15670 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PK28_15595 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PK28_15610 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PK28_15605 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PK28_15550 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PK28_15535 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PK28_13890 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PK28_15665 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PK28_15675 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PK28_15660 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PK28_15195 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PK28_15560 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PK28_15515 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PK28_15575 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PK28_15475 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PK28_15530 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PK28_14360 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PK28_09920 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PK28_01120 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PK28_15600 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PK28_15555 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PK28_01115 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PK28_00655 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PK28_15570 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PK28_15520 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PK28_14900 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D PK28_11285 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PK28_00640 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PK28_04150 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PK28_09915 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PK28_05450 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D PK28_13195 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PK28_04210 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PK28_04190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PK28_13215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PK28_04205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PK28_13200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hyd03009]
D PK28_05575 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PK28_10595 DNA-binding protein K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D PK28_03790 GTPase Era K03595 era; GTPase
D PK28_05820 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D PK28_01960 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D PK28_16145 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PK28_02230 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D PK28_15680 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PK28_11260 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PK28_10855 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PK28_05530 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PK28_06865 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PK28_01625 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PK28_03610 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PK28_14740 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PK28_16325 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PK28_00250 23S rRNA methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D PK28_01510 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PK28_15405 oxidoreductase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D PK28_11355 THUMP domain-containing protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D PK28_00585 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D PK28_11940 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PK28_14335 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PK28_03710 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PK28_15180 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PK28_00230 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D PK28_12490 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D PK28_05140 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D PK28_14350 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D PK28_00630 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D PK28_04010 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PK28_03895 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D PK28_00795 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PK28_11135 hypothetical protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D PK28_08985 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PK28_03795 GTP-binding protein Der K03977 engA; GTPase
D PK28_16550 GTPase HflX K03665 hflX; GTPase
D PK28_12065 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PK28_13235 MFS transporter K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PK28_01565 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D PK28_16140 ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D PK28_14765 iojap family protein K09710 ybeB; ribosome-associated protein
D PK28_01825 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D PK28_15975 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D PK28_12725 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
D PK28_11280 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:hyd03016]
D PK28_13000 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PK28_11720 RNA 2',3'-cyclic phosphate--5'-hydroxyl ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D PK28_02040 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PK28_02565 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PK28_01880 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PK28_10630 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PK28_05440 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PK28_13120 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PK28_06030 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PK28_04470 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PK28_10515 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PK28_02735 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PK28_01865 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PK28_09905 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PK28_14425 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PK28_16125 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PK28_09165 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PK28_08625 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PK28_00505 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PK28_05030 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PK28_09990 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PK28_13015 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PK28_13990 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PK28_10060 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PK28_02185 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PK28_12075 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_03770 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_12065 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PK28_11650 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PK28_09715 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PK28_01835 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PK28_03625 hypothetical protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D PK28_04155 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PK28_02830 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D PK28_04445 CMP deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PK28_02445 NifR3 family TIM-barrel protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PK28_10790 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D PK28_10720 2-methylthioadenine synthetase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D PK28_09075 hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D PK28_05400 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D PK28_10425 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D PK28_12090 heme biosynthesis protein HemY K13628 iscA; iron-sulfur cluster assembly protein
D PK28_05880 [Fe-S]-binding protein K13628 iscA; iron-sulfur cluster assembly protein
D PK28_10750 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D PK28_02790 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PK28_13920 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D PK28_14380 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PK28_13280 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D PK28_09690 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D PK28_15000 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D PK28_03630 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D PK28_05515 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PK28_05920 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PK28_04165 peptidase M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PK28_13685 tRNA threonylcarbamoyladenosine biosynthesis protein Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PK28_09265 ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PK28_09950 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:hyd03012]
D PK28_11410 hypothetical protein K03113 EIF1; translation initiation factor 1
D PK28_16150 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PK28_09910 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PK28_12770 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PK28_10595 DNA-binding protein K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D PK28_15210 elongation factor Ts K02357 tsf; elongation factor Ts
D PK28_15695 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PK28_15625 fusA; elongation factor G K02355 fusA; elongation factor G
D PK28_01385 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PK28_15730 ribosome-recycling factor K02838 frr; ribosome recycling factor
D PK28_02490 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PK28_05445 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PK28_15500 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PK28_11300 elongation factor P K02356 efp; elongation factor P
D PK28_14070 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PK28_03080 peptide chain release factor 1 K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:hyd03110]
D PK28_04710 Clp protease ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D PK28_06105 Clp protease ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PK28_13255 ATPase AAA K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PK28_14090 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D PK28_03295 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D PK28_06515 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PK28_15445 heat shock protein Hsp70 K04044 hscA; molecular chaperone HscA
D PK28_10825 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PK28_05840 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PK28_01315 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D PK28_06745 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D PK28_05835 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D PK28_15345 hypothetical protein K13993 HSP20; HSP20 family protein
D PK28_01280 hypothetical protein K13993 HSP20; HSP20 family protein
D PK28_10820 molecular chaperone GroES K04078 groES; chaperonin GroES
D PK28_02865 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PK28_15340 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D PK28_14770 peptidase M41 K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D PK28_03390 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PK28_06700 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D PK28_10295 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D PK28_13780 hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D PK28_08970 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PK28_01990 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D PK28_09615 membrane protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D PK28_10605 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D PK28_15125 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PK28_15130 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D PK28_14530 thioredoxin K03671 TXN; thioredoxin
D PK28_06625 thioredoxin K03671 TXN; thioredoxin
D PK28_01480 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:hyd04131]
D PK28_04420 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PK28_11420 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PK28_05555 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PK28_03295 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D PK28_09895 hypothetical protein K23293 RMDN3; regulator of microtubule dynamics protein 3
D PK28_07945 MFS transporter permease K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:hyd04121]
C 03051 Proteasome [BR:hyd03051]
D PK28_03295 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:hyd03032]
D PK28_09080 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PK28_03885 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PK28_14150 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PK28_11530 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PK28_09360 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PK28_11605 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_10950 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PK28_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PK28_08320 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PK28_09995 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PK28_14885 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PK28_09870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PK28_04935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PK28_14025 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PK28_03125 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PK28_09550 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PK28_10195 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PK28_08705 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PK28_09885 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PK28_09845 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PK28_08745 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PK28_12630 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hyd03036]
D PK28_00720 hypothetical protein K16862 PLD6; mitochondrial cardiolipin hydrolase [EC:3.1.4.-]
D PK28_05575 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PK28_03885 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PK28_01315 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D PK28_01320 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D PK28_14150 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D PK28_11695 DNA polymerase K04047 dps; starvation-inducible DNA-binding protein
D PK28_06915 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PK28_15465 septum formation initiator K13052 divIC; cell division protein DivIC
D PK28_08385 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PK28_09115 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PK28_06910 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D PK28_06895 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PK28_13695 cell division protein K09811 ftsX; cell division transport system permease protein
D PK28_06920 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PK28_05040 cell division protein ZapA K09888 zapA; cell division protein ZapA
D PK28_14315 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D PK28_17490 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_06190 transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_14265 hypothetical protein K04074 divIVA; cell division initiation protein
D PK28_04350 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PK28_04355 hypothetical protein K03570 mreC; rod shape-determining protein MreC
D PK28_04370 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D PK28_17295 hypothetical protein K03496 parA; chromosome partitioning protein
D PK28_17425 hypothetical protein K03496 parA; chromosome partitioning protein
D PK28_13560 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PK28_13570 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PK28_09885 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PK28_01835 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PK28_05530 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PK28_15970 integrase K03733 xerC; integrase/recombinase XerC
D PK28_09100 integrase K04763 xerD; integrase/recombinase XerD
D PK28_09355 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PK28_18415 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PK28_17815 addiction module protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D PK28_09035 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:hyd03400]
D PK28_08190 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D PK28_13595 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PK28_15795 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PK28_03880 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D PK28_05380 Fe-S cluster assembly protein HesB K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PK28_14585 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PK28_03915 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PK28_10850 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D PK28_16195 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PK28_10870 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D PK28_12710 Fe-S cluster assembly protein HesB K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D PK28_11465 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PK28_01810 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PK28_04845 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D PK28_02000 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PK28_09550 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PK28_03125 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PK28_02750 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PK28_03975 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PK28_11840 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D PK28_15890 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D PK28_03365 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D PK28_17610 helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PK28_08805 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PK28_15655 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PK28_15650 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PK28_15480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PK28_16385 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PK28_16320 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PK28_11385 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D PK28_05900 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D PK28_14520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PK28_08320 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PK28_09995 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PK28_14885 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PK28_09870 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PK28_04935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PK28_11605 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_10950 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PK28_16250 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PK28_15025 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PK28_07795 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D PK28_13905 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PK28_06640 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D PK28_06670 nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D PK28_01675 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PK28_01940 DNA recombination protein RecF K03629 recF; DNA replication and repair protein RecF
D PK28_03865 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PK28_04395 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D PK28_06465 recombinase RecR K06187 recR; recombination protein RecR
D PK28_05955 DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D PK28_11040 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PK28_11050 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D PK28_10195 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PK28_08705 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PK28_09845 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PK28_08745 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PK28_03885 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PK28_07330 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PK28_14725 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PK28_11145 DNA repair protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D PK28_17335 hypothetical protein K03502 umuC; DNA polymerase V
D PK28_07100 hypothetical protein K03502 umuC; DNA polymerase V
D PK28_18045 umuDC operon-like protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PK28_07095 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PK28_17340 umuDC operon-like protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D PK28_03570 RecX family transcriptional regulator K03565 recX; regulatory protein
D PK28_14450 DNA polymerase IV K02347 polX; DNA polymerase (family X)
D PK28_12680 hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D PK28_01135 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PK28_01125 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PK28_04415 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:hyd03029]
D PK28_16150 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PK28_09910 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PK28_15210 elongation factor Ts K02357 tsf; elongation factor Ts
D PK28_15695 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PK28_15625 fusA; elongation factor G K02355 fusA; elongation factor G
D PK28_03790 GTPase Era K03595 era; GTPase
D PK28_09990 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PK28_10630 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PK28_04470 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PK28_01865 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PK28_13120 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PK28_16235 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PK28_10500 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PK28_14045 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PK28_00095 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D PK28_11230 hypothetical protein K01173 ENDOG; endonuclease G, mitochondrial
D PK28_11605 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PK28_10950 hypothetical protein K03111 ssb; single-strand DNA-binding protein
D PK28_03695 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D PK28_06515 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PK28_05835 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D PK28_10825 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PK28_10820 molecular chaperone GroES K04078 groES; chaperonin GroES
D PK28_05840 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PK28_12075 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_03770 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_06745 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D PK28_14960 thioredoxin K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D PK28_09355 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D PK28_13830 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PK28_13835 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PK28_13545 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PK28_11110 electron transporter SenC K07152 SCO1; protein SCO1
D PK28_13810 hypothetical protein K07152 SCO1; protein SCO1
D PK28_00720 hypothetical protein K16862 PLD6; mitochondrial cardiolipin hydrolase [EC:3.1.4.-]
D PK28_03295 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hyd02000]
D PK28_04085 antibiotic ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D PK28_02190 antibiotic ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PK28_05785 hypothetical protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D PK28_11455 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PK28_05675 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D PK28_12175 ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein
D PK28_08265 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PK28_12730 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PK28_11750 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D PK28_08260 phosphonate ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PK28_11745 organic solvent ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D PK28_14685 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D PK28_00535 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D PK28_07815 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D PK28_01895 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D PK28_13290 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D PK28_13285 iron (III) ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D PK28_02810 iron ABC transporter ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D PK28_07885 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D PK28_01050 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D PK28_09940 permease K07091 lptF; lipopolysaccharide export system permease protein
D PK28_05510 permease K11720 lptG; lipopolysaccharide export system permease protein
D PK28_02015 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D PK28_18010 hypothetical protein K19341 nosY; Cu-processing system permease protein
D PK28_18005 hypothetical protein K19340 nosF; Cu-processing system ATP-binding protein
D PK28_08290 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein
D PK28_08285 gliding motility protein GldA K25152 gldA; gliding motility-associated transport system ATP-binding protein
D PK28_08295 gliding-associated ABC transporter substrate-binding component GldG K25153 gldG; gliding motility-associatede transport system auxiliary component
D PK28_07250 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein
D PK28_07255 multidrug ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D PK28_07265 ATPase K25182 ybhF; drug efflux transport system ATP-binding protein
D PK28_07270 secretion protein K25183 ybhG; membrane fusion protein YbhG
D PK28_01555 releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D PK28_17620 ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D PK28_12010 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D PK28_17625 ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PK28_07315 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D PK28_04255 ABC transporter permease K02195 ccmC; heme exporter protein C
D PK28_04250 ABC transporter permease K02194 ccmB; heme exporter protein B
D PK28_13695 cell division protein K09811 ftsX; cell division transport system permease protein
D PK28_08385 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D PK28_05860 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PK28_04460 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PK28_09425 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D PK28_09430 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PK28_05855 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PK28_17900 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PK28_17930 macrolide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PK28_16615 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PK28_16620 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D PK28_10735 ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D PK28_02795 ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D PK28_16630 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PK28_14055 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PK28_11490 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PK28_12250 multidrug transporter K26939 norM; MATE family, multidrug efflux pump
D PK28_13050 major facilitator transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D PK28_04425 nucleoside permease K11537 xapB; MFS transporter, NHS family, xanthosine permease
D PK28_16860 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D PK28_01265 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PK28_02980 major facilitator transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D PK28_07945 MFS transporter permease K06902 UMF1; MFS transporter, UMF1 family
D PK28_09365 hypothetical protein K10716 kch; voltage-gated potassium channel
D PK28_12370 ion transporter K10716 kch; voltage-gated potassium channel
D PK28_04765 potassium channel protein K10716 kch; voltage-gated potassium channel
D PK28_00810 hypothetical protein K08715 IRPC; inward rectifier potassium channel
D PK28_05360 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D PK28_12280 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog
D PK28_11580 von willebrand factor type a K07114 yfbK; Ca-activated chloride channel homolog
D PK28_08665 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D PK28_08930 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog
D PK28_16180 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D PK28_17645 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel
D PK28_03085 magnesium transporter K06213 mgtE; magnesium transporter
D PK28_14610 hypothetical protein K02557 motB; chemotaxis protein MotB
D PK28_09470 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D PK28_10040 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D PK28_03755 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB
D PK28_10045 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D PK28_08880 magnesium transporter CorA K03284 corA; magnesium transporter
D PK28_10635 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D PK28_15255 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D PK28_11845 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D PK28_06240 transmembrane protein 175 K24915 TMEM175; TMEM175 potassium channel family protein
D PK28_14560 hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PK28_03095 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D PK28_04550 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D PK28_08645 hypothetical protein K19611 fepA; ferric enterobactin receptor
D PK28_07545 hypothetical protein K16091 fecA; Fe(3+) dicitrate transport protein
D PK28_15800 hypothetical protein K16092 btuB; vitamin B12 transporter
D PK28_12940 hypothetical protein K16092 btuB; vitamin B12 transporter
D PK28_08090 membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PK28_00485 hypothetical protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PK28_16790 hypothetical protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PK28_13085 hypothetical protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PK28_13955 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PK28_04970 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D PK28_05410 hypothetical protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PK28_06850 hypothetical protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D PK28_03275 energy transducer TonB K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PK28_15065 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PK28_04705 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PK28_12500 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D PK28_18550 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system
D PK28_02960 hypothetical protein K12340 tolC; outer membrane protein
D PK28_03490 hypothetical protein K12340 tolC; outer membrane protein
D PK28_17500 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D PK28_07420 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D PK28_07750 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D PK28_03695 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D PK28_05930 membrane protein K05807 bamD; outer membrane protein assembly factor BamD
D PK28_00905 hypothetical protein K09800 tamB; translocation and assembly module TamB
D PK28_15460 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D PK28_01030 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D PK28_17355 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D PK28_02355 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D PK28_07145 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D PK28_01425 major facilitator transporter K16211 malY; maltose/moltooligosaccharide transporter
D PK28_00700 amino acid permease K19540 frlA; fructoselysine transporter
D PK28_03270 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PK28_01325 zinc/iron permease K16267 zipB; zinc and cadmium transporter
D PK28_05365 ZIP family zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D PK28_18235 transporter K07238 TC.ZIP; zinc transporter, ZIP family
D PK28_18210 acriflavine resistance protein B K15726 czcA; heavy metal efflux system protein
D PK28_18265 metal transporter K07787 cusA; copper/silver efflux system protein
D PK28_06185 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D PK28_03500 copper transporter K18989 vexF; multidrug efflux pump
D PK28_18150 cation transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D PK28_07910 membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D PK28_10345 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D PK28_03580 permease K05786 rarD; chloramphenicol-sensitive protein RarD
D PK28_18220 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D PK28_07000 hypothetical protein K07301 yrbG; cation:H+ antiporter
D PK28_17450 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D PK28_11075 hypothetical protein K03316 nhaP; Na+:H+ antiporter
D PK28_17440 hypothetical protein K03316 nhaP; Na+:H+ antiporter
D PK28_11070 hypothetical protein K03281 clcA; chloride channel protein, CIC family
D PK28_01255 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PK28_02525 chromate transporter K07240 chrA; chromate transporter
D PK28_08840 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D PK28_16020 manganese transporter K03322 mntH; manganese transport protein
D PK28_18465 arsenic resistance protein ArsB K03325 ACR3; arsenite transporter
D PK28_07160 arsenic resistance protein ArsB K03325 ACR3; arsenite transporter
D PK28_09605 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D PK28_13005 membrane protein K09125 yhhQ; queuosine precursor transporter
D PK28_11700 iron transporter K22736 VIT; vacuolar iron transporter family protein
D PK28_09085 membrane protein K05595 marC; multiple antibiotic resistance protein
D PK28_06895 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D PK28_15275 hypothetical protein K03832 tonB; periplasmic protein TonB
D PK28_03730 hypothetical protein K03832 tonB; periplasmic protein TonB
D PK28_03740 energy transducer TonB K03832 tonB; periplasmic protein TonB
D PK28_12120 hypothetical protein K03641 tolB; TolB protein
D PK28_02970 secretion protein HlyD K03543 emrA; membrane fusion protein, multidrug efflux system
D PK28_18560 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D PK28_18275 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D PK28_17490 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_06190 transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_03495 RND transporter K18990 vexE; membrane fusion protein, multidrug efflux system
D PK28_07430 secretion protein HylD K19586 oqxA; membrane fusion protein, multidrug efflux system
D PK28_07745 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D PK28_17840 glycan metabolism protein RagB K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_04965 carbohydrate-binding protein SusD K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_13080 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_16785 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_17695 glycan metabolism protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_13950 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_07230 glycan metabolism protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_08085 membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_05995 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D PK28_15090 hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter
D PK28_03600 iron transporter K04758 feoA; ferrous iron transport protein A
D PK28_03605 iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D PK28_04270 cytochrome C biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:hyd02044]
D PK28_02960 hypothetical protein K12340 tolC; outer membrane protein
D PK28_03490 hypothetical protein K12340 tolC; outer membrane protein
D PK28_14860 hypothetical protein K02237 comEA; competence protein ComEA
D PK28_06770 hypothetical protein K02238 comEC; competence protein ComEC
D PK28_17240 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC
D PK28_12155 hypothetical protein K04337 csgE; curli production assembly/transport component CsgE
D PK28_12150 hypothetical protein K04338 csgF; curli production assembly/transport component CsgF
D PK28_12145 curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG
D PK28_15375 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PK28_15685 preprotein translocase K03073 secE; preprotein translocase subunit SecE
D PK28_10810 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PK28_15510 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PK28_08505 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PK28_00635 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PK28_02250 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PK28_13545 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PK28_16225 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D PK28_01580 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hyd02042]
D PK28_14560 hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:hyd02022]
D PK28_15175 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D PK28_15170 ArsR family transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PK28_09325 transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PK28_06710 hypothetical protein K11618 liaR; two-component system, NarL family, response regulator LiaR
D PK28_06210 hypothetical protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PK28_08700 hypothetical protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D PK28_12930 hypothetical protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D PK28_12905 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D PK28_17735 transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D PK28_17570 LytTR family transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D PK28_18670 hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator
D PK28_17890 chemotaxis protein CheY K02477 K02477; two-component system, LytTR family, response regulator
D PK28_06835 hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator
D PK28_12925 hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator
D PK28_08770 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PK28_15875 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PK28_10240 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PK28_15870 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D PK28_11665 histidine kinase K11443 divK; two-component system, cell cycle response regulator DivK
D PK28_13095 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS
C 02035 Bacterial motility proteins [BR:hyd02035]
D PK28_08770 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D PK28_08775 hypothetical protein K03410 cheC; chemotaxis protein CheC
D PK28_15875 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PK28_10240 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D PK28_15870 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D PK28_14610 hypothetical protein K02557 motB; chemotaxis protein MotB
D PK28_09470 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hyd04812]
D PK28_04350 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PK28_06920 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PK28_06915 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PK28_17295 hypothetical protein K03496 parA; chromosome partitioning protein
D PK28_17425 hypothetical protein K03496 parA; chromosome partitioning protein
D PK28_13560 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D PK28_13570 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hyd04147]
D PK28_03295 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D PK28_15470 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PK28_11420 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PK28_07395 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PK28_05555 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PK28_08995 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D PK28_10825 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PK28_06515 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PK28_15105 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PK28_15695 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PK28_11490 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D PK28_07300 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PK28_03825 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D PK28_08655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PK28_11185 peptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D PK28_15775 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D PK28_05815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PK28_05320 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PK28_05300 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PK28_09340 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D PK28_09020 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D PK28_07030 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PK28_12975 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PK28_13450 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D PK28_10710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PK28_00690 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D PK28_12190 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D PK28_01620 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D PK28_13525 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PK28_11255 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PK28_04340 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PK28_00265 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PK28_08245 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D PK28_02460 amino acid dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PK28_03850 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D PK28_03995 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PK28_11565 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:hyd02048]
D PK28_16945 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PK28_08610 hypothetical protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PK28_02320 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D PK28_16935 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PK28_08605 SAM-dependent methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PK28_02300 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PK28_18490 hypothetical protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D PK28_02940 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D PK28_11275 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D PK28_06920 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PK28_04350 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D PK28_09885 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PK28_02040 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D PK28_12075 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PK28_03770 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:hyd04090]
D PK28_11185 peptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:hyd01504]
D PK28_01265 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D PK28_12920 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D PK28_02990 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D PK28_14250 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PK28_01205 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D PK28_17490 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_06190 transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D PK28_06185 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D PK28_17500 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D PK28_07420 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D PK28_02960 hypothetical protein K12340 tolC; outer membrane protein
D PK28_03490 hypothetical protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:hyd00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hyd03100]
D PK28_05715 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PK28_04200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PK28_13205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PK28_07280 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PK28_08680 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PK28_14640 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PK28_16590 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PK28_00520 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PK28_10895 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PK28_13635 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PK28_05465 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PK28_11425 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PK28_11430 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PK28_16315 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PK28_15850 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PK28_15705 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PK28_04125 tRNA-His K14226 tRNA-His; tRNA His
D PK28_04195 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PK28_13210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PK28_11685 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_13240 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_16310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_06400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_06740 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PK28_11925 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PK28_07415 tRNA-Met K14230 tRNA-Met; tRNA Met
D PK28_01065 tRNA-Met K14230 tRNA-Met; tRNA Met
D PK28_09930 tRNA-Met K14230 tRNA-Met; tRNA Met
D PK28_02140 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PK28_02205 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PK28_02200 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PK28_08675 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PK28_07870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PK28_06150 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PK28_06145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PK28_08670 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PK28_15700 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PK28_10210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PK28_03530 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PK28_15690 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PK28_15710 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PK28_02380 tRNA-Val K14237 tRNA-Val; tRNA Val
D PK28_00145 tRNA-Val K14237 tRNA-Val; tRNA Val
D PK28_04190 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PK28_13215 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PK28_04205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PK28_13200 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PK28_13195 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PK28_04210 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PK28_14085 short-chain dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D PK28_10590 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D PK28_11935 short-chain dehydrogenase K11166 DHRS7B; dehydrogenase/reductase SDR family member 7B [EC:1.1.-.-]
D PK28_15960 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D PK28_12420 NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D PK28_06695 hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D PK28_07355 alcohol dehydrogenase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D PK28_03110 hypothetical protein K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D PK28_07480 cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D PK28_16495 protein-methionine-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PK28_09760 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PK28_05430 peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PK28_03450 PilB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PK28_13655 arylesterase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D PK28_11195 alkyl hydroperoxide reductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PK28_11570 thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PK28_14140 hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PK28_07285 hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PK28_07360 Ohr subfamily peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PK28_04830 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PK28_04820 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PK28_01240 nuclease PIN K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D PK28_00915 dihydropteridine reductase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D PK28_00525 fatty acid hydroxylase K19703 FA2H; 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase [EC:1.14.18.6]
D PK28_18470 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PK28_07155 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D PK28_10475 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D PK28_05270 acetylornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D PK28_18160 GNAT family acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D PK28_15840 hypothetical protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D PK28_01630 hypothetical protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D PK28_14295 GNAT family acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D PK28_05890 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D PK28_12825 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D PK28_17525 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PK28_00555 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PK28_12100 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D PK28_17725 hypothetical protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D PK28_05120 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PK28_13680 hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D PK28_00165 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PK28_11030 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PK28_06135 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PK28_08525 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PK28_00590 esterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D PK28_15945 capsular biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D PK28_16555 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D PK28_07860 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PK28_01450 alpha-amylase K21575 susA; neopullulanase [EC:3.2.1.135]
D PK28_04785 alpha-amylase K21575 susA; neopullulanase [EC:3.2.1.135]
D PK28_16715 alpha-amylase K21575 susA; neopullulanase [EC:3.2.1.135]
D PK28_00800 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PK28_07850 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D PK28_09970 GlcNAc-PI de-N-acetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D PK28_02055 dfrA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PK28_00665 deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D PK28_16305 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PK28_02900 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PK28_15135 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PK28_13770 magnesium chelatase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D PK28_04985 UV damage repair endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D PK28_03445 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D PK28_09665 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D PK28_13630 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D PK28_11535 peptidoglycan synthetase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D PK28_07325 haloacid dehalogenase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D PK28_18225 metal ABC transporter ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D PK28_09505 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D PK28_03470 [Fe-S]-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D PK28_14790 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D PK28_00620 bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D PK28_13315 alcohol dehydrogenase K13955 yogA; zinc-binding alcohol dehydrogenase/oxidoreductase
D PK28_00940 formate dehydrogenase K02379 fdhD; FdhD protein
D PK28_12080 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PK28_08240 electron transfer flavoprotein subunit alpha K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D PK28_13520 hypothetical protein K08234 yaeR; glyoxylase I family protein
D PK28_12285 alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D PK28_16075 membrane protein K07027 K07027; glycosyltransferase 2 family protein
D PK28_05775 hypothetical protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D PK28_12205 ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
D PK28_06965 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D PK28_09440 DoxX family protein K15977 K15977; putative oxidoreductase
D PK28_15010 hypothetical protein K15977 K15977; putative oxidoreductase
D PK28_14715 hypothetical protein K26958 brxA_B; bacilliredoxin
D PK28_00465 general stress protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PK28_14840 cold-shock protein K03704 cspA; cold shock protein
D PK28_04300 cold-shock protein K03704 cspA; cold shock protein
D PK28_12350 cold-shock protein K03704 cspA; cold shock protein
D PK28_11025 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
D PK28_11795 hypothetical protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D PK28_06460 Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D PK28_13245 trigger factor K03545 tig; trigger factor
D PK28_13675 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein
D PK28_04070 magnesium chelatase K07391 comM; magnesium chelatase family protein
D PK28_14415 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D PK28_00460 OsmC family protein K07397 yhfA; putative redox protein
D PK28_07935 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D PK28_06200 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PK28_05005 hypothetical protein K03630 radC; DNA repair protein RadC
D PK28_03305 hypothetical protein K07460 yraN; putative endonuclease
D PK28_00270 hypothetical protein K07461 K07461; putative endonuclease
D PK28_11585 endonuclease K07461 K07461; putative endonuclease
D PK28_10525 DNA processing protein DprA K04096 smf; DNA processing protein
D PK28_06600 ATPase AAA K07478 ycaJ; putative ATPase
D PK28_04505 hypothetical protein K07501 K07501; 3'-5' exonuclease
D PK28_12765 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D PK28_15825 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PK28_17870 phage-shock protein K03969 pspA; phage shock protein A
D PK28_15285 hypothetical protein K03972 pspE; phage shock protein E
D PK28_07500 hypothetical protein K03972 pspE; phage shock protein E
D PK28_08550 DNA-binding protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PK28_04175 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PK28_08425 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PK28_08830 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PK28_06705 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PK28_02430 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PK28_10835 peptide ABC transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PK28_16750 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D PK28_17535 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
C 99978 Cell growth
D PK28_17975 hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D PK28_08475 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D PK28_16215 peptidase m23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D PK28_05425 GTP-binding protein TypA K06207 typA; GTP-binding protein
D PK28_16835 signal transduction protein K07182 K07182; CBS domain-containing protein
D PK28_16350 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D PK28_09120 cell envelope biogenesis protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D PK28_03700 membrane protein K06142 hlpA; outer membrane protein
D PK28_03705 outer membrane chaperone Skp K06142 hlpA; outer membrane protein
D PK28_10360 secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D PK28_17615 RND transporter K02005 ABC.CD.TX; HlyD family secretion protein
D PK28_14330 hypothetical protein K06143 creD; inner membrane protein
D PK28_08080 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F
C 99994 Others
D PK28_13600 cobalt transporter K06195 apaG; ApaG protein
D PK28_18000 hypothetical protein K07218 nosD; nitrous oxidase accessory protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PK28_03645 colicin v production protein K03558 cvpA; membrane protein required for colicin V production
D PK28_12945 GNAT family acetyltransferase K02348 elaA; ElaA protein
D PK28_12260 tRNA-binding protein K06878 K06878; tRNA-binding protein
D PK28_00345 SEC-independent protein translocase TATC K06886 glbN; hemoglobin
D PK28_00350 hypothetical protein K06886 glbN; hemoglobin
D PK28_07570 hypothetical protein K06886 glbN; hemoglobin
D PK28_10880 hypothetical protein K07001 K07001; NTE family protein
D PK28_00820 hypothetical protein K07001 K07001; NTE family protein
D PK28_12915 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D PK28_04640 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D PK28_07080 hypothetical protein K07038 K07038; inner membrane protein
D PK28_16375 hypothetical protein K07038 K07038; inner membrane protein
D PK28_06140 ribonuclease bn K07058 K07058; membrane protein
D PK28_12330 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D PK28_09140 sulfurtransferase K07146 K07146; UPF0176 protein
D PK28_03190 LemA family protein K03744 lemA; LemA protein
D PK28_15915 hypothetical protein K03975 dedA; membrane-associated protein
D PK28_08785 membrane protein K08972 K08972; putative membrane protein
D PK28_13805 membrane protein K08976 K08976; putative membrane protein
D PK28_14875 membrane protein K08984 yjdF; putative membrane protein
D PK28_02755 hypothetical protein K08995 K08995; putative membrane protein
D PK28_02765 hypothetical protein K08995 K08995; putative membrane protein
D PK28_00235 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D PK28_14200 ankyrin K06867 K06867; uncharacterized protein
D PK28_03180 beta-propeller domains of methanol dehydrogenase K06872 K06872; uncharacterized protein
D PK28_08690 general stress protein K06884 K06884; uncharacterized protein
D PK28_09220 phosphohydrolase K06885 K06885; uncharacterized protein
D PK28_13900 thioredoxin K06888 K06888; uncharacterized protein
D PK28_03945 hypothetical protein K06889 K06889; uncharacterized protein
D PK28_03950 hypothetical protein K06889 K06889; uncharacterized protein
D PK28_07010 dienelactone hydrolase K06889 K06889; uncharacterized protein
D PK28_06380 membrane protein K06890 K06890; uncharacterized protein
D PK28_15315 hypothetical protein K06934 K06934; uncharacterized protein
D PK28_10205 phosphohydrolase K06950 K06950; uncharacterized protein
D PK28_02100 membrane protein K06973 K06973; uncharacterized protein
D PK28_07195 hypothetical protein K06975 K06975; uncharacterized protein
D PK28_11715 X-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein
D PK28_05455 X-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein
D PK28_10570 membrane protein K07003 K07003; uncharacterized protein
D PK28_01875 membrane protein K07003 K07003; uncharacterized protein
D PK28_05535 alpha/beta hydrolase K07019 K07019; uncharacterized protein
D PK28_07605 hydrolase TatD K07051 K07051; uncharacterized protein
D PK28_14390 epimerase K07071 K07071; uncharacterized protein
D PK28_17395 hypothetical protein K07074 K07074; uncharacterized protein
D PK28_17390 nucleotidyltransferase K07074 K07074; uncharacterized protein
D PK28_08430 hypothetical protein K07090 K07090; uncharacterized protein
D PK28_11485 membrane protein K07090 K07090; uncharacterized protein
D PK28_07510 permease K07090 K07090; uncharacterized protein
D PK28_12685 phosphodiesterase K07095 K07095; uncharacterized protein
D PK28_05000 DNA mismatch repair protein MutT K07098 K07098; uncharacterized protein
D PK28_07485 transporter K07112 K07112; uncharacterized protein
D PK28_07495 transmembrane protein K07112 K07112; uncharacterized protein
D PK28_04760 hypothetical protein K07124 K07124; uncharacterized protein
D PK28_08650 hypothetical protein K07126 K07126; uncharacterized protein
D PK28_10390 FAD-binding protein K07137 K07137; uncharacterized protein
D PK28_06310 hypothetical protein K07140 K07140; MOSC domain-containing protein
D PK28_10775 zinc ribbon domain protein K07164 K07164; uncharacterized protein
D PK28_05610 hypothetical protein K08998 K08998; uncharacterized protein
D PK28_08250 hypothetical protein K08999 K08999; uncharacterized protein
D PK28_07470 hypothetical protein K09004 K09004; uncharacterized protein
D PK28_03640 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D PK28_05370 hypothetical protein K09131 K09131; uncharacterized protein
D PK28_05025 hypothetical protein K09164 K09164; uncharacterized protein
D PK28_03175 hypothetical protein K09164 K09164; uncharacterized protein
D PK28_05420 hypothetical protein K09166 K09166; uncharacterized protein
D PK28_05870 hypothetical protein K09166 K09166; uncharacterized protein
D PK28_04720 ABC transporter K09781 K09781; uncharacterized protein
D PK28_05180 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D PK28_00815 membrane protein K09922 K09922; uncharacterized protein
D PK28_13385 hypothetical protein K09924 K09924; uncharacterized protein
D PK28_16735 six-hairpin glycosidase K09955 K09955; uncharacterized protein
D PK28_05245 UDP-glucose 4-epimerase K09959 K09959; uncharacterized protein
D PK28_01470 urea carboxylase-associated protein K09967 K09967; uncharacterized protein
D PK28_07555 hypothetical protein K07338 K07338; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024