+D GENES KO
#
KEGG Orthology (KO) - Hydrogenophaga sp. SNF1
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:hydr00010]
D SOM08_02650 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SOM08_07290 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SOM08_05880 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SOM08_19290 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOM08_15475 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SOM08_22255 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOM08_21805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOM08_17560 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOM08_02605 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOM08_12695 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOM08_19280 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOM08_10450 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SOM08_02405 mdeB; (GenBank) alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOM08_13225 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOM08_13230 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_16265 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SOM08_03305 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_05905 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_11975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_06490 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SOM08_19485 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SOM08_04115 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D SOM08_00790 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:hydr00020]
D SOM08_16045 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SOM08_15965 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SOM08_15995 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SOM08_13875 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOM08_13885 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOM08_13335 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SOM08_13340 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_22170 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SOM08_22175 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SOM08_16030 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SOM08_16035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SOM08_16020 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SOM08_16025 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SOM08_14345 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SOM08_09430 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SOM08_16010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SOM08_00790 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D SOM08_02405 mdeB; (GenBank) alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOM08_13225 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOM08_13230 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:hydr00030]
D SOM08_07290 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SOM08_07310 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SOM08_07305 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D SOM08_01715 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SOM08_22260 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOM08_04270 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SOM08_09710 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SOM08_08610 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SOM08_16610 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SOM08_07300 edd; (GenBank) phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D SOM08_07295 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SOM08_15715 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D SOM08_05150 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D SOM08_10330 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SOM08_07170 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D SOM08_20035 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D SOM08_05470 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SOM08_19290 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOM08_05880 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:hydr00040]
D SOM08_13530 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SOM08_16230 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOM08_01715 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SOM08_20170 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:hydr00051]
D SOM08_16235 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D SOM08_06355 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SOM08_21975 gmd; (GenBank) GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D SOM08_21970 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D SOM08_21990 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D SOM08_16760 mandelate racemase/muconate lactonizing enzyme family protein K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D SOM08_05880 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SOM08_19290 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOM08_15475 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SOM08_21095 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:hydr00052]
D SOM08_16240 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOM08_20260 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOM08_16230 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOM08_02650 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SOM08_01295
C 00053 Ascorbate and aldarate metabolism [PATH:hydr00053]
D SOM08_13530 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SOM08_05150 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D SOM08_21990 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D SOM08_05440 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_07260 gudD; (GenBank) glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D SOM08_07275 garD; (GenBank) galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42]
C 00500 Starch and sucrose metabolism [PATH:hydr00500]
D SOM08_16230 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOM08_02670 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D SOM08_02680 otsB; (GenBank) trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D SOM08_02650 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SOM08_07290 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:hydr00620]
D SOM08_05905 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_11975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_02405 mdeB; (GenBank) alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOM08_13225 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOM08_13230 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_03305 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SOM08_16265 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SOM08_08595 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOM08_08590 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOM08_19280 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOM08_09235 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SOM08_04935 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SOM08_04940 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SOM08_16100 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_06490 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SOM08_19485 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SOM08_16775 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D SOM08_18820 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D SOM08_00680 FAD-linked oxidase C-terminal domain-containing protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D SOM08_11830 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SOM08_15805 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SOM08_20345 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SOM08_01180 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SOM08_09910 gloB; (GenBank) hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SOM08_02320 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SOM08_10330 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SOM08_16320 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SOM08_22295 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SOM08_16010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SOM08_14345 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SOM08_09430 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SOM08_05395 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SOM08_00790 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D SOM08_10450 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SOM08_01565 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12460 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SOM08_12465 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hydr00630]
D SOM08_12935 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D SOM08_01565 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D SOM08_16010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SOM08_16045 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SOM08_15965 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SOM08_15995 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SOM08_05905 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_11975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_08580 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SOM08_12130 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SOM08_20630 acyl-CoA dehydrogenase family protein K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D SOM08_11820 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D SOM08_11815 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D SOM08_11805 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SOM08_19615 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D SOM08_00950 glcE; (GenBank) glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D SOM08_00955 glcF; (GenBank) glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D SOM08_02320 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SOM08_10330 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SOM08_01720 gph; (GenBank) phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SOM08_16255 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SOM08_02045 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D SOM08_15310 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D SOM08_00570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_00610 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_08305 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_12365 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_15155 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_19645 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_09180 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOM08_08440 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SOM08_08450 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_08445 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D SOM08_06710 gcl; (GenBank) glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D SOM08_06705 hyi; (GenBank) hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D SOM08_06700 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D SOM08_06805 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D SOM08_07250 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D SOM08_18815 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D SOM08_05470 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SOM08_12190 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D SOM08_07295 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SOM08_02375 molybdopterin-dependent oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SOM08_17360 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SOM08_02370 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D SOM08_17355 fdh3B; (GenBank) formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SOM08_17345 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D SOM08_15895 kynB; (GenBank) arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D SOM08_19600 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:hydr00640]
D SOM08_05905 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_11975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_13295 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D SOM08_06490 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SOM08_19485 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SOM08_08595 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOM08_08590 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_02230 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SOM08_19450 YhdH/YhfP family quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_09235 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SOM08_04935 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SOM08_04940 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SOM08_16100 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SOM08_12845 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D SOM08_00605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SOM08_19595 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SOM08_11820 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D SOM08_11815 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D SOM08_11805 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SOM08_22175 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SOM08_22170 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SOM08_01075 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SOM08_15965 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SOM08_15995 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SOM08_12935 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
C 00650 Butanoate metabolism [PATH:hydr00650]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_06485 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_13790 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_18285 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_20645 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_14570 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SOM08_18105 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_02230 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SOM08_03300 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SOM08_08545 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SOM08_12120 phaC; (GenBank) class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SOM08_11855 phaZ; (GenBank) polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D SOM08_08580 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SOM08_12130 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SOM08_12190 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D SOM08_16030 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SOM08_16035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SOM08_16020 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SOM08_16025 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SOM08_00605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SOM08_08985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_19940 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_20315 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_14685 iron-containing alcohol dehydrogenase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D SOM08_13265 4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D SOM08_02325 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SOM08_08505 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SOM08_08510 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SOM08_00715 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D SOM08_06765 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D SOM08_06495 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D SOM08_13035 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D SOM08_03415 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_05230 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_10600 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_11620 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_12440 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_20735 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_12445 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOM08_12310 SDR family NAD(P)-dependent oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00660 C5-Branched dibasic acid metabolism [PATH:hydr00660]
D SOM08_03415 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_05230 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_10600 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_11620 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_12440 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_20735 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_12445 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOM08_22175 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SOM08_22170 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SOM08_11670 ligK; (GenBank) 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D SOM08_20040 RraA family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D SOM08_16050 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SOM08_16060 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SOM08_16065 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:hydr00562]
D SOM08_15600 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SOM08_01075 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SOM08_15475 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:hydr00190]
D SOM08_15460 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D SOM08_15455 NADH-quinone oxidoreductase subunit B family protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D SOM08_15450 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D SOM08_15445 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D SOM08_15440 nuoE; (GenBank) NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D SOM08_15435 nuoF; (GenBank) NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D SOM08_15430 nuoG; (GenBank) NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D SOM08_15425 nuoH; (GenBank) NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D SOM08_15420 nuoI; (GenBank) NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D SOM08_15415 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D SOM08_15410 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D SOM08_15405 nuoL; (GenBank) NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D SOM08_15400 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D SOM08_15395 nuoN; (GenBank) NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D SOM08_00480 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SOM08_16030 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SOM08_16035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SOM08_16020 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SOM08_16025 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SOM08_04575 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D SOM08_04580 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SOM08_04585 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D SOM08_16905 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SOM08_16930 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D SOM08_16950 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D SOM08_16955 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D SOM08_16940 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D SOM08_16910 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D SOM08_12880 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D SOM08_12885 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D SOM08_12890 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D SOM08_12895 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D SOM08_05665 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SOM08_05660 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SOM08_05775 c-type cytochrome K08738 CYC; cytochrome c
D SOM08_12800 c-type cytochrome K08738 CYC; cytochrome c
D SOM08_20980 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SOM08_20970 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SOM08_20975 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SOM08_20985 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SOM08_20965 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SOM08_21000 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SOM08_20990 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SOM08_03100 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SOM08_20995 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SOM08_12380 ppa; (GenBank) inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SOM08_09775 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SOM08_10425 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:hydr00710]
D SOM08_21805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOM08_22255 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOM08_19290 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOM08_05880 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SOM08_22260 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SOM08_09710 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SOM08_15475 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SOM08_01715 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SOM08_04270 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SOM08_05395 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SOM08_16320 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SOM08_22295 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SOM08_16010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:hydr00720]
D SOM08_10450 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SOM08_05395 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SOM08_16010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SOM08_14345 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SOM08_09430 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SOM08_16030 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SOM08_16035 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SOM08_16020 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SOM08_16025 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SOM08_22170 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SOM08_22175 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SOM08_13265 4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13875 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOM08_13885 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOM08_15965 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SOM08_15995 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SOM08_09235 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SOM08_04935 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SOM08_04940 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SOM08_16100 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SOM08_20625 CoA transferase K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3]
D SOM08_20640 MaoC family dehydratase N-terminal domain-containing protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D SOM08_11805 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SOM08_13210 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SOM08_02455 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SOM08_08590 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOM08_08595 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOM08_05905 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_11975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:hydr00680]
D SOM08_16265 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SOM08_16260 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D SOM08_02375 molybdopterin-dependent oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SOM08_17360 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SOM08_02370 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D SOM08_17355 fdh3B; (GenBank) formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SOM08_17345 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D SOM08_09180 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOM08_05470 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SOM08_12695 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOM08_05395 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SOM08_16010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SOM08_19290 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SOM08_05880 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SOM08_08595 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SOM08_08590 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOM08_05905 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_11975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_10450 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SOM08_17560 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOM08_02605 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOM08_13800 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOM08_20045 C-terminal binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOM08_08245 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SOM08_12995 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:hydr00910]
D SOM08_06645 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D SOM08_06650 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D SOM08_00850 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SOM08_15515 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SOM08_00855 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D SOM08_15520 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D SOM08_00860 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SOM08_15525 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SOM08_06655 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_06665 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_06675 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_15540 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D SOM08_15530 nirB; (GenBank) nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D SOM08_15535 nirD; (GenBank) nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D SOM08_18990 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D SOM08_01430 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D SOM08_07140 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D SOM08_15375 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SOM08_01955 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SOM08_00570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_00610 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_08305 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_12365 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_15155 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_19645 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_04425 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SOM08_04430 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SOM08_00865 cynS; (GenBank) cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D SOM08_20865 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SOM08_02210 can; (GenBank) carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:hydr00920]
D SOM08_01050 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SOM08_01065 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SOM08_01045 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D SOM08_01040 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D SOM08_01035 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SOM08_09900 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOM08_21300 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOM08_21310 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D SOM08_21305 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SOM08_12510 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOM08_12515 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOM08_12520 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D SOM08_05790 soxA; (GenBank) sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D SOM08_05795 soxX; (GenBank) sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D SOM08_05780 soxY; (GenBank) thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D SOM08_05785 soxZ; (GenBank) thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D SOM08_05800 soxB; (GenBank) thiosulfohydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D SOM08_00025 soxC; (GenBank) sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D SOM08_05765 soxC; (GenBank) sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D SOM08_00030 cytochrome c K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D SOM08_05770 c-type cytochrome K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D SOM08_07205 PepSY domain-containing protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SOM08_10175 sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SOM08_12530 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D SOM08_05755 NAD(P)/FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D SOM08_05760 c-type cytochrome K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D SOM08_06900 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SOM08_08935 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SOM08_15590 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SOM08_00350 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SOM08_22395 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SOM08_05995 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D SOM08_11045 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D SOM08_14530 3-(methylthio)propionyl-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D SOM08_14915 long-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D SOM08_02930 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D SOM08_07135 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D SOM08_18115 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D SOM08_10880 crotonase/enoyl-CoA hydratase family protein K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:hydr00061]
D SOM08_09235 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SOM08_04935 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SOM08_04940 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SOM08_16100 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SOM08_10200 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SOM08_10210 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SOM08_16185 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D SOM08_16195 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOM08_05525 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SOM08_16200 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SOM08_10260 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SOM08_10205 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOM08_16180 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOM08_02875 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_07365 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_07680 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_09955 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_10275 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_13555 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_16190 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_19935 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_13150 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SOM08_08550 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOM08_11290 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOM08_02965 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_03605 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05130 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05445 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_17855 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_18410 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20565 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_21700 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:hydr00071]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_18100 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_14570 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SOM08_18105 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SOM08_02230 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SOM08_02285 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_13770 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_17910 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_18475 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_20540 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_13570 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D SOM08_06435 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SOM08_02965 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_03605 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05130 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05445 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_17855 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_18410 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20565 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_21700 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20580 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SOM08_21065 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SOM08_16265 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SOM08_03305 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis [PATH:hydr00073]
D SOM08_18145 SDR family oxidoreductase K28138 acrB; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
D SOM08_18205 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
C 00074 Mycolic acid biosynthesis [PATH:hydr00074]
D SOM08_16115 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SOM08_10200 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SOM08_10210 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SOM08_16185 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D SOM08_16195 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:hydr00561]
D SOM08_05470 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_19135 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SOM08_16205 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SOM08_05925 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOM08_02180 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOM08_17095 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOM08_12430 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SOM08_18205 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
C 00564 Glycerophospholipid metabolism [PATH:hydr00564]
D SOM08_17540 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SOM08_19095 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SOM08_05925 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOM08_02180 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOM08_17095 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOM08_12430 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SOM08_04745 ugpQ; (GenBank) glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SOM08_07610 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SOM08_11825 methyltransferase domain-containing protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D SOM08_04860 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SOM08_13120 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SOM08_12455 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SOM08_06840 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SOM08_18325 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SOM08_12175 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SOM08_01685 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D SOM08_04840 clsB; (GenBank) cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SOM08_15635 clsB; (GenBank) cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SOM08_19235 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SOM08_19780 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:hydr00592]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_18100 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:hydr01040]
D SOM08_07440 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D SOM08_13490 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SOM08_20720 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D SOM08_17805 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:hydr00230]
D SOM08_15385 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SOM08_08610 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SOM08_16610 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SOM08_05990 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SOM08_13990 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SOM08_07415 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SOM08_18320 purT; (GenBank) formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D SOM08_11595 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SOM08_15850 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SOM08_19325 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SOM08_19320 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SOM08_19310 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SOM08_22110 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SOM08_17175 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SOM08_22425 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SOM08_04120 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SOM08_10045 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SOM08_05965 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D SOM08_12110 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SOM08_12015 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SOM08_13390 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SOM08_16500 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SOM08_05595 xdhA; (GenBank) xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D SOM08_05590 xdhB; (GenBank) xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D SOM08_11740 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOM08_12020 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOM08_06820 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SOM08_05650 guaD; (GenBank) guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D SOM08_16525 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SOM08_04970 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOM08_06685 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOM08_04965 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SOM08_04410 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D SOM08_16535 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SOM08_09790 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SOM08_13045 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D SOM08_10625 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D SOM08_14875 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D SOM08_19705 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D SOM08_13465 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SOM08_04955 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D SOM08_18305 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D SOM08_05635 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D SOM08_13835 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SOM08_15610 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D SOM08_05720 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D SOM08_12510 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOM08_12515 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOM08_16285 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D SOM08_00125 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D SOM08_16295 puuE; (GenBank) allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D SOM08_16445 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SOM08_16440 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SOM08_16430 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D SOM08_20865 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:hydr00240]
D SOM08_13185 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOM08_13175 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOM08_17110 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SOM08_00035 D-aminoacylase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SOM08_17100 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SOM08_17785 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SOM08_09705 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D SOM08_01165 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SOM08_19360 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SOM08_13105 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SOM08_13390 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SOM08_14020 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SOM08_12705 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SOM08_04120 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SOM08_10045 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SOM08_05965 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D SOM08_05010 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SOM08_17115 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SOM08_01910 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D SOM08_05705 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D SOM08_04970 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOM08_06685 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOM08_04965 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SOM08_14715 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SOM08_06945 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SOM08_08625 thymidine phosphorylase family protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D SOM08_08335 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SOM08_00120 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D SOM08_16300 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D SOM08_18780 cysteine hydrolase K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
D SOM08_14485 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:hydr00250]
D SOM08_17495 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SOM08_13815 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SOM08_01355 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOM08_05510 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOM08_11910 XrtA/PEP-CTERM system amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOM08_19225 N-acetylglutaminylglutamine amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOM08_10540 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SOM08_05960 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOM08_16750 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOM08_13465 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SOM08_22110 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SOM08_17110 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SOM08_00605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SOM08_08985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_19940 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_20315 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_04425 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SOM08_04430 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SOM08_15375 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SOM08_01955 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SOM08_17900 aldehyde dehydrogenase family protein K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D SOM08_19655 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SOM08_00570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_00610 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_08305 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_12365 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_15155 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_19645 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_13185 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOM08_13175 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOM08_02770 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOM08_05990 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:hydr00260]
D SOM08_09245 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SOM08_16070 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOM08_10545 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SOM08_06870 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D SOM08_10550 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SOM08_01745 ltaE; (GenBank) low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D SOM08_09180 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOM08_02320 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SOM08_10330 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SOM08_05470 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SOM08_17560 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOM08_02605 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOM08_13800 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOM08_20045 C-terminal binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOM08_08245 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SOM08_12995 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SOM08_08440 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SOM08_08450 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_08445 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D SOM08_12455 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SOM08_00805 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SOM08_02025 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SOM08_04200 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SOM08_16095 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SOM08_16090 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:hydr00270]
D SOM08_15590 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SOM08_13475 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SOM08_00830 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOM08_00895 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOM08_04310 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SOM08_21695 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SOM08_12110 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SOM08_00130 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D SOM08_11865 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SOM08_02445 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SOM08_09245 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SOM08_16070 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOM08_10545 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SOM08_00350 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SOM08_22395 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SOM08_08370 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SOM08_11070 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SOM08_05995 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D SOM08_01415 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOM08_07730 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SOM08_21375 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SOM08_21345 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SOM08_06900 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SOM08_08935 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SOM08_16010 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SOM08_16875 cysM; (GenBank) cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D SOM08_13800 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOM08_20045 C-terminal binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOM08_08245 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:hydr00280]
D SOM08_01415 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_02230 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SOM08_02285 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_13770 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_17910 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_18475 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_20540 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SOM08_02205 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_18100 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_11820 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D SOM08_11815 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D SOM08_11805 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SOM08_01075 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_12860 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D SOM08_19595 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SOM08_02315 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D SOM08_02275 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D SOM08_02290 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D SOM08_02325 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SOM08_08505 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SOM08_08510 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SOM08_00715 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D SOM08_06765 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_19680
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hydr00290]
D SOM08_00805 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SOM08_02025 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SOM08_04200 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SOM08_16050 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SOM08_16060 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SOM08_16065 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SOM08_03415 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_05230 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_10600 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_11620 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_12440 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_20735 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_12445 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOM08_08010 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SOM08_12450 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SOM08_11025 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SOM08_12810 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SOM08_01415 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOM08_10540 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SOM08_12460 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SOM08_12465 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:hydr00300]
D SOM08_10545 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SOM08_09245 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SOM08_16070 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOM08_06970 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SOM08_21650 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SOM08_14135 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SOM08_15880 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SOM08_14140 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D SOM08_14125 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SOM08_17735 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SOM08_04355 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SOM08_02045 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D SOM08_15310 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D SOM08_17670 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOM08_17665 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:hydr00310]
D SOM08_13340 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_06435 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_01590 NAD(P)/FAD-dependent oxidoreductase K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2]
D SOM08_01585 nitrilase-related carbon-nitrogen hydrolase K01506 davA; 5-aminopentanamidase [EC:3.5.1.30]
D SOM08_08985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_19940 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_20315 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_21110 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D SOM08_21010 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SOM08_11505 FAD-binding oxidoreductase K26064 amaD; D-lysine oxidase
D SOM08_20425 delta(1)-pyrroline-2-carboxylate reductase family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D SOM08_06690 FAD-binding oxidoreductase K26065 amaA; L-pipecolate oxidase
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00220 Arginine biosynthesis [PATH:hydr00220]
D SOM08_15885 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SOM08_20860 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SOM08_05960 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOM08_16750 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOM08_18270 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D SOM08_16445 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SOM08_16440 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SOM08_16430 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D SOM08_20855 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D SOM08_00570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_00610 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_08305 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_12365 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_15155 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_19645 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_13185 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SOM08_13175 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SOM08_20865 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SOM08_15375 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SOM08_01955 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SOM08_10540 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SOM08_12560 argA; (GenBank) amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D SOM08_04620 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D SOM08_10575 GNAT family N-acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D SOM08_18140 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SOM08_22180 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SOM08_15880 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:hydr00330]
D SOM08_01905 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D SOM08_02010 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D SOM08_01910 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D SOM08_01940 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D SOM08_01935 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D SOM08_11285 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D SOM08_00550 speB; (GenBank) agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D SOM08_00575 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_00600 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D SOM08_00160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_08110 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_00555 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D SOM08_18270 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D SOM08_19140 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SOM08_19655 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SOM08_17900 aldehyde dehydrogenase family protein K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D SOM08_04690 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SOM08_21410 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D SOM08_16830 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D SOM08_21010 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SOM08_20425 delta(1)-pyrroline-2-carboxylate reductase family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:hydr00340]
D SOM08_04485 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SOM08_13460 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D SOM08_04525 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D SOM08_04520 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D SOM08_04510 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SOM08_04505 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SOM08_04515 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SOM08_04500 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D SOM08_04495 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_10705 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_17105 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_04490 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_17945 egtD; (GenBank) L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:hydr00350]
D SOM08_04495 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_10705 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_17105 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_11865 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SOM08_02140 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SOM08_12105 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D SOM08_01175 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SOM08_19565 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SOM08_20870 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SOM08_16265 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SOM08_03305 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SOM08_01470 hpaD; (GenBank) 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D SOM08_01465 hpaE; (GenBank) 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D SOM08_11690 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D SOM08_01475 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D SOM08_01455 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D SOM08_01460 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D SOM08_01480 hpaH; (GenBank) 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D SOM08_01485 HpcH/HpaI aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D SOM08_07255 aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D SOM08_08985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_19940 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_20315 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_21790 cupin domain-containing protein K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D SOM08_15165 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D SOM08_21795 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:hydr00360]
D SOM08_02135 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SOM08_17250 paaK; (GenBank) phenylacetate--CoA ligase PaaK K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D SOM08_17255 paaI; (GenBank) hydroxyphenylacetyl-CoA thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D SOM08_02485 paaA; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D SOM08_02480 paaB; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D SOM08_02475 paaC; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D SOM08_02470 paaD; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit PaaD K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D SOM08_02465 2Fe-2S iron-sulfur cluster-binding protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D SOM08_17260 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D SOM08_20525 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_06485 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_13790 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_18285 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_20645 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_04495 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_10705 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_17105 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_11865 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SOM08_02140 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SOM08_00760 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D SOM08_13090 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D SOM08_14205 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D SOM08_21010 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SOM08_01975 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D SOM08_00160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_08110 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_20580 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SOM08_21065 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SOM08_13615 FAD-dependent monooxygenase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D SOM08_16845 FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D SOM08_05450 hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:hydr00380]
D SOM08_15905 kynA; (GenBank) tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D SOM08_15895 kynB; (GenBank) arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D SOM08_15900 kynU; (GenBank) kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D SOM08_17880 amidohydrolase family protein K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D SOM08_13340 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_06435 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_00160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_08110 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_21520 iaaH; (GenBank) indoleacetamide hydrolase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
D SOM08_01975 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hydr00400]
D SOM08_04910 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SOM08_04405 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SOM08_03520 type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D SOM08_08400 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D SOM08_08405 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SOM08_04400 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SOM08_08230 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SOM08_08385 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SOM08_01735 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SOM08_01740 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SOM08_01755 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SOM08_16085 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SOM08_01760 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SOM08_16095 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SOM08_16090 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SOM08_08240 pheA; (GenBank) prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D SOM08_08235 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SOM08_04495 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_10705 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_17105 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_11865 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SOM08_02135 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SOM08_10290 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:hydr00410]
D SOM08_21715 panD; (GenBank) aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SOM08_00605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_17535 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SOM08_00120 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D SOM08_16300 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D SOM08_19595 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_02230 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SOM08_12845 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D SOM08_01075 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:hydr00430]
D SOM08_08980 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_12165 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_20115 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_08590 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SOM08_08595 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:hydr00440]
D SOM08_20100 phnY; (GenBank) phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
D SOM08_20090 phnA; (GenBank) phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]
D SOM08_06830 TIGR03364 family FAD-dependent oxidoreductase K27877 pbfD; 2-(methylaminoethyl)phosphonate oxidase [EC:1.5.3.27]
C 00450 Selenocompound metabolism [PATH:hydr00450]
D SOM08_13475 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SOM08_00830 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOM08_00895 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOM08_07455 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SOM08_12500 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SOM08_12510 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOM08_12515 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOM08_11580 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D SOM08_17470 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:hydr00460]
D SOM08_08980 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_12165 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_20115 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_13815 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SOM08_09180 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:hydr00470]
D SOM08_00995 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SOM08_21010 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SOM08_17635 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOM08_14340 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SOM08_17655 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOM08_02600 DSD1 family PLP-dependent enzyme K19967 dta; D-threonine aldolase [EC:4.1.2.42]
D SOM08_17735 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SOM08_04355 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SOM08_00760 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D SOM08_13090 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D SOM08_14205 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:hydr00480]
D SOM08_08980 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_12165 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_20115 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_15815 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D SOM08_08205 hydantoinase B/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D SOM08_18350 YbdK family carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D SOM08_07730 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SOM08_21375 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SOM08_21345 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SOM08_12600 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SOM08_05885 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SOM08_01545 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_01665 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_02040 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_02690 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_09340 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_10740 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_11400 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_17080 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_18935 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_20110 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_22210 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_18295 gorA; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SOM08_13875 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOM08_13885 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOM08_07310 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SOM08_00980 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SOM08_12615 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SOM08_21145 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D SOM08_22105
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hydr00520]
D SOM08_08265 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D SOM08_22325 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D SOM08_22270 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D SOM08_02755 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SOM08_04480 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOM08_05945 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOM08_16110 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SOM08_09745 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SOM08_02770 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOM08_07290 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SOM08_16235 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D SOM08_05440 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SOM08_02650 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SOM08_16230 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOM08_13530 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SOM08_16240 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOM08_20260 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SOM08_21095 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SOM08_06355 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SOM08_01395 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:hydr00541]
D SOM08_02755 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SOM08_01385 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D SOM08_01380 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D SOM08_01370 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D SOM08_01375 DapH/DapD/GlmU-related protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D SOM08_01235 polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115]
D SOM08_01230 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D SOM08_01210 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D SOM08_01225 SDR family oxidoreductase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D SOM08_22420 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SOM08_12700 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SOM08_22415 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SOM08_13840 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SOM08_19745 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SOM08_02175 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SOM08_16230 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SOM08_13530 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SOM08_05240 FAD-binding oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D SOM08_16890 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D SOM08_20180 2Fe-2S iron-sulfur cluster-binding protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D SOM08_01395 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SOM08_01405 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SOM08_01390 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SOM08_01240 SDR family oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SOM08_01400 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SOM08_16235 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D SOM08_21975 gmd; (GenBank) GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D SOM08_21970 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D SOM08_11200 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 00540 Lipopolysaccharide biosynthesis [PATH:hydr00540]
D SOM08_13155 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SOM08_17615 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SOM08_13145 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SOM08_09205 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SOM08_13160 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SOM08_13850 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SOM08_04315 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SOM08_04320 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SOM08_08605 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D SOM08_21810 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SOM08_06380 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D SOM08_06375 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:hydr00550]
D SOM08_04480 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOM08_05945 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOM08_17640 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SOM08_17655 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOM08_17670 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOM08_17635 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOM08_17665 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SOM08_13115 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SOM08_15665 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SOM08_17660 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOM08_17645 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SOM08_04870 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_04370 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_07160 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_18995 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_17650 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_04890 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_01125 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SOM08_17675 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SOM08_21225 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOM08_19335 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:hydr00552]
D SOM08_15665 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SOM08_01210 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:hydr00543]
D SOM08_22035 glycosyltransferase WbuB K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D SOM08_22015 putative colanic acid biosynthesis acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D SOM08_15590 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:hydr00730]
D SOM08_05565 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SOM08_17165 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SOM08_18505 thiD; (GenBank) bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SOM08_15285 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOM08_05560 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D SOM08_06925 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SOM08_05550 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D SOM08_01700 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D SOM08_06575 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SOM08_13835 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:hydr00740]
D SOM08_09115 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SOM08_09140 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SOM08_09335 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D SOM08_09110 ribH; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SOM08_17585 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SOM08_09120 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SOM08_07395 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SOM08_15385 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:hydr00750]
D SOM08_15820 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D SOM08_08245 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SOM08_04565 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D SOM08_16120 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D SOM08_10550 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:hydr00760]
D SOM08_17495 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SOM08_17520 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D SOM08_17525 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SOM08_00335 pncB; (GenBank) nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SOM08_04120 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SOM08_10045 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SOM08_14005 nadD; (GenBank) nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SOM08_05495 nadE; (GenBank) NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SOM08_12400 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D SOM08_01680 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SOM08_13505 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D SOM08_16560 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SOM08_21710 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SOM08_21720 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SOM08_21705 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D SOM08_00745 peptidase M29 K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D SOM08_08985 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_19940 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SOM08_20315 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:hydr00770]
D SOM08_03415 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_05230 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_10600 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_11620 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_12440 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_20735 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SOM08_12445 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SOM08_08010 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SOM08_12450 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SOM08_11025 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SOM08_12810 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SOM08_17530 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SOM08_01495 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SOM08_17535 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SOM08_18210 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D SOM08_12710 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SOM08_16630 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SOM08_04645 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SOM08_16115 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SOM08_09470 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D SOM08_01415 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOM08_00120 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D SOM08_16300 uraD; (GenBank) 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D SOM08_21715 panD; (GenBank) aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:hydr00780]
D SOM08_16960 biotin synthase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D SOM08_10260 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SOM08_10205 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOM08_16180 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOM08_02875 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_07365 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_07680 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_09955 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_10275 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_13555 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_16190 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_19935 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_13150 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SOM08_08550 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOM08_11290 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOM08_02305 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SOM08_02300 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SOM08_02310 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SOM08_10710 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D SOM08_22225 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:hydr00785]
D SOM08_21020 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SOM08_21025 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SOM08_03340 hypothetical protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_02405 mdeB; (GenBank) alpha-ketoglutarate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOM08_13225 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SOM08_13230 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SOM08_13335 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SOM08_13340 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SOM08_08440 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SOM08_08450 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SOM08_08445 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:hydr00790]
D SOM08_17605 folE; (GenBank) GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SOM08_04830 nudB; (GenBank) dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D SOM08_02625 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SOM08_15825 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SOM08_09740 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SOM08_15070 sul2; (GenBank) sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D SOM08_08330 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SOM08_05975 folC; (GenBank) bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SOM08_09115 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SOM08_17515 pabB; (GenBank) aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D SOM08_03445 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SOM08_06580 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D SOM08_02135 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SOM08_03440 queE; (GenBank) 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SOM08_04095 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SOM08_16825 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SOM08_09950 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SOM08_22140 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SOM08_10570 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SOM08_15580 mog; (GenBank) molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SOM08_09940 glp; (GenBank) gephyrin-like molybdotransferase Glp K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SOM08_10560 glp; (GenBank) gephyrin-like molybdotransferase Glp K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SOM08_09945 mobA; (GenBank) molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D SOM08_07845
C 00670 One carbon pool by folate [PATH:hydr00670]
D SOM08_08330 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SOM08_13210 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SOM08_09180 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOM08_07415 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SOM08_17175 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SOM08_08450 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SOM08_00830 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOM08_00895 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOM08_08335 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SOM08_19600 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D SOM08_02455 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SOM08_02710 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D SOM08_04310 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SOM08_02445 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SOM08_08440 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_08445 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:hydr00860]
D SOM08_06000 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOM08_04735 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SOM08_00535 transaminase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOM08_06760 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOM08_06845 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOM08_17170 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOM08_01555 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SOM08_05400 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SOM08_05405 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SOM08_01995 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SOM08_14000 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D SOM08_12920 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D SOM08_21245 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D SOM08_09330 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SOM08_05410 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SOM08_15550 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SOM08_16905 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SOM08_16910 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D SOM08_12585 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D SOM08_10660 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D SOM08_00690 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SOM08_10690 cobO; (GenBank) cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SOM08_10715 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D SOM08_06570 CobD/CbiB family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D SOM08_10700 cbiB; (GenBank) adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D SOM08_10670 cobU; (GenBank) bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D SOM08_10725 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D SOM08_04195 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D SOM08_10720 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D SOM08_10730 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D SOM08_22285 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hydr00130]
D SOM08_10865 acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D SOM08_10290 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D SOM08_19150 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SOM08_08260 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D SOM08_04780 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SOM08_04210 coq7; (GenBank) 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D SOM08_00700 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D SOM08_20715 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SOM08_09060 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SOM08_02140 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:hydr00900]
D SOM08_06925 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SOM08_13125 ispC; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SOM08_13005 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SOM08_16600 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SOM08_13010 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SOM08_13410 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SOM08_05045 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_06920 farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SOM08_04670 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SOM08_13115 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SOM08_06585 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:hydr00906]
D SOM08_09360 hpnD; (GenBank) presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:hydr00907]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_17935 SDR family oxidoreductase K13774 atuB; citronellol/citronellal dehydrogenase
D SOM08_17925 acyl-CoA dehydrogenase family protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D SOM08_17915 biotin carboxylase N-terminal domain-containing protein K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D SOM08_17930 carboxyl transferase domain-containing protein K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D SOM08_17920 enoyl-CoA hydratase/isomerase family protein K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D SOM08_02325 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_18100 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
D SOM08_09480 type I polyketide synthase K15643 mxaB; myxalamid-type polyketide synthase MxaB
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SOM08_22260 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:hydr00523]
D SOM08_01395 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SOM08_01405 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SOM08_01390 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SOM08_01240 SDR family oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SOM08_01400 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:hydr01053]
D SOM08_17990 AMP-binding protein K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D SOM08_19185 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:hydr01055]
D SOM08_02260 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D SOM08_01405 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
D SOM08_07900 prolyl oligopeptidase family serine peptidase K26184 fdeB; naringenin degradation protein FdeB
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:hydr00311]
D SOM08_14860 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D SOM08_04105 bla; (GenBank) class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:hydr00332]
D SOM08_04690 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SOM08_21410 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:hydr00261]
D SOM08_02260 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D SOM08_12510 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SOM08_12515 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SOM08_09245 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SOM08_16070 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SOM08_06970 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SOM08_21650 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:hydr00521]
D SOM08_02650 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SOM08_15600 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SOM08_01395 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SOM08_01405 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SOM08_01390 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SOM08_01240 SDR family oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SOM08_01400 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SOM08_02650 glk; (GenBank) glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:hydr00525]
D SOM08_01395 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SOM08_01405 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:hydr00401]
D SOM08_08235 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SOM08_04495 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_10705 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_17105 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_11865 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:hydr00405]
D SOM08_06615 flavin-dependent oxidoreductase K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D SOM08_01735 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SOM08_01740 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SOM08_16195 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOM08_02875 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_07365 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_07680 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_09955 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_10275 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_13555 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_16190 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_19935 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_08550 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOM08_11290 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SOM08_10200 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SOM08_10210 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SOM08_16185 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:hydr00999]
D SOM08_04310 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SOM08_08405 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:hydr00362]
D SOM08_08970 alpha/beta fold hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D SOM08_09445 3-oxoacid CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D SOM08_09440 3-oxoacid CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_18100 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_09435 pcaF; (GenBank) 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D SOM08_17980 pcaF; (GenBank) 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D SOM08_05450 hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D SOM08_14455 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D SOM08_10395 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D SOM08_19770 protocatechuate 3,4-dioxygenase K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D SOM08_08490 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D SOM08_11680 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SOM08_20765 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SOM08_11685 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D SOM08_20760 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D SOM08_11690 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D SOM08_11675 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D SOM08_11665 amidohydrolase family protein K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D SOM08_11670 ligK; (GenBank) 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D SOM08_20040 RraA family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D SOM08_20580 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SOM08_21065 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SOM08_12140 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D SOM08_15160 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D SOM08_15260 fdx; (GenBank) ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D SOM08_20695 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D SOM08_13650 pobA; (GenBank) 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D SOM08_20770 pobA; (GenBank) 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D SOM08_21785 3-hydroxybenzoate 6-monooxygenase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24]
D SOM08_10865 acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D SOM08_17440 benzoate-CoA ligase family protein K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D SOM08_20675 SDR family oxidoreductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SOM08_14570 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SOM08_18105 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SOM08_06435 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_06485 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_13790 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_18285 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_20645 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_17415 boxA; (GenBank) benzoyl-CoA 2,3-epoxidase subunit BoxA K15511 boxA; benzoyl-CoA 2,3-epoxidase subunit A [EC:1.14.13.208]
D SOM08_17420 boxB; (GenBank) benzoyl-CoA 2,3-epoxidase subunit BoxB K15512 boxB; benzoyl-CoA 2,3-epoxidase subunit B [EC:1.14.13.208]
D SOM08_17435 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase K15514 boxD; 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase [EC:1.2.1.77]
D SOM08_17425 boxC; (GenBank) 2,3-epoxybenzoyl-CoA dihydrolase K15513 boxC; benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44]
C 00627 Aminobenzoate degradation [PATH:hydr00627]
D SOM08_00160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_08110 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_17440 benzoate-CoA ligase family protein K04110 badA; benzoate-CoA ligase [EC:6.2.1.25]
D SOM08_21510 alpha-hydroxy acid oxidase K15054 mdlB; (S)-mandelate dehydrogenase [EC:1.1.99.31]
D SOM08_21600 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D SOM08_18480 AMP-binding protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D SOM08_18460 bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D SOM08_08960 Rieske 2Fe-2S domain-containing protein K16319 andAc; anthranilate 1,2-dioxygenase large subunit [EC:1.14.12.1]
D SOM08_08955 aromatic-ring-hydroxylating dioxygenase subunit beta K16320 andAd; anthranilate 1,2-dioxygenase small subunit [EC:1.14.12.1]
D SOM08_19175 non-heme iron oxygenase ferredoxin subunit K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
D SOM08_10910 aromatic ring-hydroxylating dioxygenase subunit alpha K03862 vanA; vanillate monooxygenase [EC:1.14.13.82]
D SOM08_01915 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit
D SOM08_03085 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit
D SOM08_10920 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit
D SOM08_20360 PDR/VanB family oxidoreductase K03863 vanB; vanillate monooxygenase ferredoxin subunit
D SOM08_11680 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SOM08_20765 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SOM08_11685 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D SOM08_20760 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D SOM08_11690 Gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D SOM08_11675 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:hydr00364]
D SOM08_01535 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_06885 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_20355 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_10395 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:hydr00625]
D SOM08_14890 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D SOM08_03305 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SOM08_16265 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SOM08_09960 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SOM08_01570 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D SOM08_16700 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:hydr00361]
D SOM08_14890 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D SOM08_01535 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_06885 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_20355 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_10395 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D SOM08_14455 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D SOM08_11785 TauD/TfdA family dioxygenase K06912 tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase [EC:1.14.11.-]
D SOM08_01570 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D SOM08_16700 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:hydr00623]
D SOM08_21600 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D SOM08_19925 aromatic ring-hydroxylating dioxygenase subunit alpha K15768 tsaM; p-toluenesulfonate methyl-monooxygenase oxygenase component TsaM [EC:1.14.13.-]
D SOM08_01535 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_06885 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_20355 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SOM08_10395 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation [PATH:hydr00622]
D SOM08_21600 aldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D SOM08_05450 hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation [PATH:hydr00633]
D SOM08_12100 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D SOM08_19175 non-heme iron oxygenase ferredoxin subunit K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
C 00642 Ethylbenzene degradation [PATH:hydr00642]
D SOM08_19175 non-heme iron oxygenase ferredoxin subunit K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_18100 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:hydr00643]
D SOM08_12105 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D SOM08_01175 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SOM08_19565 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SOM08_20870 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SOM08_00160 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_03370 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SOM08_08110 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
D SOM08_16445 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SOM08_16440 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SOM08_16430 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:hydr00930]
D SOM08_05150 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D SOM08_19470 acyl-CoA dehydrogenase family protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D SOM08_17265 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_17970 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_20650 enoyl-CoA hydratase-related protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SOM08_13560 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D SOM08_20195 FAD-dependent oxidoreductase K14520 hapE; 4-hydroxyacetophenone monooxygenase [EC:1.14.13.84]
C 00621 Dioxin degradation
D SOM08_05450 hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:hydr00626]
D SOM08_19175 non-heme iron oxygenase ferredoxin subunit K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
D SOM08_19195 aromatic ring-hydroxylating dioxygenase subunit alpha K18242 nagG; salicylate 5-hydroxylase large subunit [EC:1.14.13.172]
D SOM08_19190 aromatic-ring-hydroxylating dioxygenase subunit beta K18243 nagH; salicylate 5-hydroxylase small subunit [EC:1.14.13.172]
D SOM08_03305 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SOM08_16265 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:hydr00624]
D SOM08_19175 non-heme iron oxygenase ferredoxin subunit K14578 nahAb; naphthalene 1,2-dioxygenase ferredoxin component
D SOM08_05250 aromatic ring-hydroxylating dioxygenase subunit alpha K18074 tphA2; terephthalate 1,2-dioxygenase oxygenase component alpha subunit [EC:1.14.12.15]
D SOM08_12235 aromatic ring-hydroxylating dioxygenase subunit alpha K18074 tphA2; terephthalate 1,2-dioxygenase oxygenase component alpha subunit [EC:1.14.12.15]
D SOM08_05245 aromatic-ring-hydroxylating dioxygenase subunit beta K18075 tphA3; terephthalate 1,2-dioxygenase oxygenase component beta subunit [EC:1.14.12.15]
D SOM08_12240 nuclear transport factor 2 family protein K18075 tphA3; terephthalate 1,2-dioxygenase oxygenase component beta subunit [EC:1.14.12.15]
D SOM08_12250 FAD-binding oxidoreductase K18077 tphA1; terephthalate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D SOM08_12245 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K18076 tphB; 1,2-dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase [EC:1.3.1.53]
D SOM08_11680 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SOM08_20765 ligA; (GenBank) protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SOM08_11685 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D SOM08_20760 class III extradiol dioxygenase subunit beta K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D SOM08_19770 protocatechuate 3,4-dioxygenase K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation [PATH:hydr00365]
D SOM08_07905 GMC family oxidoreductase N-terminal domain-containing protein K16873 hmfH; 5-(hydroxymethyl)furfural/furfural oxidase [EC:1.1.3.47 1.1.3.-]
C 00984 Steroid degradation [PATH:hydr00984]
D SOM08_02945 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D SOM08_19440 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D SOM08_20535 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_18100 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SOM08_11240 hypothetical protein K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D SOM08_16980 MaoC family dehydratase K28224 scdD; enoyl-CoA hydratase [EC:4.2.1.-]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:hydr03020]
D SOM08_01825 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOM08_01830 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOM08_19010 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SOM08_16530 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D SOM08_05730 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:hydr03010]
D SOM08_02070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOM08_02095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOM08_02085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOM08_02110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOM08_02090 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOM08_02115 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOM08_08225 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SOM08_13095 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SOM08_21165 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SOM08_19015 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SOM08_19055 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SOM08_10490 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SOM08_21215 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SOM08_19070 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SOM08_02500 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SOM08_21200 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SOM08_19020 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SOM08_21220 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SOM08_19025 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SOM08_19075 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SOM08_15490 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SOM08_06545 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SOM08_21150 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SOM08_10500 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SOM08_21175 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SOM08_15870 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SOM08_15560 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SOM08_01810 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SOM08_21180 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SOM08_21195 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SOM08_21190 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SOM08_19080 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SOM08_19065 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SOM08_10505 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SOM08_01815 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SOM08_01805 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SOM08_01820 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SOM08_02495 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SOM08_19090 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SOM08_19045 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SOM08_21160 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SOM08_19005 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SOM08_19060 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SOM08_06560 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SOM08_12965 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SOM08_04675 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SOM08_21170 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SOM08_21185 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SOM08_19085 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SOM08_16615 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D SOM08_04680 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SOM08_07450 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SOM08_21155 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SOM08_19050 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SOM08_09835 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SOM08_16210 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SOM08_07445 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SOM08_22460 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SOM08_12960 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SOM08_19030 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:hydr00970]
D SOM08_02080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOM08_02105 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOM08_06005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOM08_06800 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOM08_13710 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOM08_16545 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOM08_17035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOM08_20920 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOM08_12495 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SOM08_06015 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SOM08_14260 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SOM08_16605 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SOM08_06010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SOM08_01775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOM08_08930 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOM08_14255 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOM08_12210 tRNA-His K14226 tRNA-His; tRNA His
D SOM08_02075 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SOM08_02100 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SOM08_13065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_14230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_14325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_15465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_16880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_14080 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SOM08_16550 tRNA-Ile K14230 tRNA-Met; tRNA Met
D SOM08_17270 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOM08_19000 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOM08_01865 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SOM08_04665 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOM08_12990 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOM08_13715 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOM08_05350 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOM08_09250 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOM08_11265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOM08_16465 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOM08_01780 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOM08_04600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOM08_05875 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOM08_01790 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SOM08_01770 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SOM08_12200 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOM08_13050 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOM08_15250 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOM08_06000 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOM08_01150 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SOM08_03405 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SOM08_21030 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SOM08_01155 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SOM08_01145 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SOM08_07545 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SOM08_08990 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOM08_04810 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOM08_02165 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SOM08_02170 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SOM08_12950 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOM08_05050 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOM08_09225 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOM08_17470 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOM08_21840 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SOM08_16855 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOM08_21645 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOM08_07390 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOM08_07500 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOM08_01605 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOM08_04705 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOM08_13415 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOM08_12970 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOM08_12975 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOM08_02525 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOM08_05365 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:hydr03008]
D SOM08_16135 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOM08_06590 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:hydr03060]
D SOM08_19040 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SOM08_01795 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOM08_15470 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOM08_21875 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SOM08_21870 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOM08_21880 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOM08_22445 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOM08_04615 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SOM08_17545 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SOM08_05000 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOM08_09880 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D SOM08_16650 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SOM08_04540 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D SOM08_04545 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SOM08_04550 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D SOM08_16145 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SOM08_07385 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:hydr04141]
D SOM08_18385 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D SOM08_03310 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D SOM08_19610 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:hydr04122]
D SOM08_15285 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOM08_06900 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SOM08_08935 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SOM08_16865 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SOM08_21735 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SOM08_10570 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SOM08_09950 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SOM08_10565 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D SOM08_17570 moeB; (GenBank) molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SOM08_22140 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SOM08_15580 mog; (GenBank) molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SOM08_05555 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:hydr03018]
D SOM08_04700 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SOM08_05420 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D SOM08_12695 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOM08_15485 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SOM08_05715 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SOM08_15690 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SOM08_13070 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOM08_00820 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SOM08_09840 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SOM08_10770 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOM08_04275 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOM08_13435 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D SOM08_09775 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SOM08_10425 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D SOM08_15830 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:hydr03030]
D SOM08_04190 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_15255 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_09070 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOM08_09885 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOM08_14720 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOM08_21635 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOM08_12605 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOM08_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOM08_10510 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SOM08_12160 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SOM08_08700 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_19500 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_09920 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SOM08_13165 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SOM08_06880 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOM08_14160 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:hydr03410]
D SOM08_15315 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SOM08_01765 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SOM08_16575 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SOM08_16585 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SOM08_09230 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SOM08_06350 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SOM08_00300 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SOM08_19350 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SOM08_01170 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D SOM08_08325 xth; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D SOM08_06880 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOM08_16735 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOM08_14160 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:hydr03420]
D SOM08_13000 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SOM08_02390 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SOM08_19435 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SOM08_15295 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D SOM08_11965 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D SOM08_06825 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOM08_06880 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOM08_14160 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOM08_05730 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:hydr03430]
D SOM08_15645 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SOM08_07335 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D SOM08_06825 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOM08_13865 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SOM08_06915 xseB; (GenBank) exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SOM08_16735 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOM08_08700 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_19500 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_09070 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOM08_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOM08_09885 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOM08_21635 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOM08_14720 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOM08_04190 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_15255 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_12605 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOM08_14160 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:hydr03440]
D SOM08_16735 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOM08_08700 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_19500 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_16125 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SOM08_09895 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D SOM08_22190 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D SOM08_06880 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOM08_02585 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SOM08_02590 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SOM08_04855 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SOM08_19160 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SOM08_09070 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOM08_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOM08_09885 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOM08_21635 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOM08_14720 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOM08_04190 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_15255 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_12605 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOM08_01990 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SOM08_10495 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:hydr03250]
D SOM08_09215 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:hydr02010]
D SOM08_01050 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SOM08_01065 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SOM08_01045 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D SOM08_01040 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D SOM08_01035 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SOM08_12755 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D SOM08_12745 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D SOM08_12750 phosphate ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D SOM08_00850 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SOM08_15515 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SOM08_00855 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D SOM08_15520 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D SOM08_00860 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SOM08_15525 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SOM08_09900 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOM08_21300 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOM08_21310 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D SOM08_21305 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SOM08_00385 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D SOM08_11660 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein
D SOM08_00380 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D SOM08_00375 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SOM08_10185 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SOM08_17055 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D SOM08_11185 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SOM08_17060 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SOM08_00580 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D SOM08_00595 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D SOM08_00590 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D SOM08_00585 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SOM08_15320 proX; (GenBank) glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SOM08_15325 proW; (GenBank) glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D SOM08_15330 proV; (GenBank) glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SOM08_10825 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SOM08_04455 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SOM08_03045 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SOM08_04445 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SOM08_11475 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SOM08_03055 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SOM08_04440 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SOM08_11470 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SOM08_04460 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D SOM08_03050 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SOM08_04435 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SOM08_05620 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SOM08_05645 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SOM08_05610 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SOM08_05615 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SOM08_05605 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SOM08_18870 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D SOM08_18875 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D SOM08_18880 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SOM08_19100 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D SOM08_19115 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D SOM08_19110 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D SOM08_19125 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D SOM08_19120 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D SOM08_04765 ugpB; (GenBank) sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D SOM08_04760 ugpA; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D SOM08_04755 ugpE; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D SOM08_04750 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D SOM08_09795 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SOM08_09800 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D SOM08_09805 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D SOM08_09810 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SOM08_06750 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D SOM08_12735 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D SOM08_20075 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D SOM08_06745 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D SOM08_11555 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D SOM08_11560 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D SOM08_20085 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D SOM08_06755 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SOM08_11565 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SOM08_20080 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SOM08_00275 glnH; (GenBank) glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D SOM08_00270 glnP; (GenBank) glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein
D SOM08_00265 glnQ; (GenBank) glutamine ABC transporter ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SOM08_07630 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D SOM08_07625 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D SOM08_07620 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D SOM08_07615 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SOM08_14835 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D SOM08_14845 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein
D SOM08_14840 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D SOM08_14855 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D SOM08_00065 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_00100 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_02910 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_02980 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_03625 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_09300 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_11230 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_12610 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_13680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_14285 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_14535 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_15500 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_17860 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_17865 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_18080 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_18430 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_20550 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21060 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21625 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_00060 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_00095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_02905 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_02970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_03615 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_07480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_09315 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_11225 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_13675 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_14280 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_14540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_17835 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_18085 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_18420 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_20560 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_21055 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_21620 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_00055 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_00090 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02900 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_02975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_03620 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_07485 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_09320 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_11220 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_13670 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_14275 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_14545 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_17840 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_18090 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_18425 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_20555 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_21050 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_21615 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_00050 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02895 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_03610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_07490 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_09305 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_13665 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_14550 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_17845 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_18070 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_18415 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_20570 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_21045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_21610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_00045 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_00085 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_02890 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_02985 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_03630 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_07495 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_09310 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_11215 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_13660 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_14270 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_14555 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_17850 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_18075 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_18435 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_20575 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_21040 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_21605 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_08085 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D SOM08_16395 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D SOM08_21525 substrate-binding domain-containing protein K11959 urtA; urea transport system substrate-binding protein
D SOM08_08090 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein
D SOM08_16390 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D SOM08_21530 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein
D SOM08_08095 branched-chain amino acid ABC transporter permease K11961 urtC; urea transport system permease protein
D SOM08_16385 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D SOM08_21535 ATP-binding cassette domain-containing protein K11961 urtC; urea transport system permease protein
D SOM08_08100 ATP-binding cassette domain-containing protein K11962 urtD; urea transport system ATP-binding protein
D SOM08_16380 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D SOM08_08105 ATP-binding cassette domain-containing protein K11963 urtE; urea transport system ATP-binding protein
D SOM08_16375 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D SOM08_21540 ATP-binding cassette domain-containing protein K11963 urtE; urea transport system ATP-binding protein
D SOM08_11295 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D SOM08_11300 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D SOM08_11305 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D SOM08_11310 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D SOM08_10110 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D SOM08_10120 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D SOM08_10115 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SOM08_13590 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D SOM08_18335 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D SOM08_18330 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D SOM08_16725 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D SOM08_16720 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SOM08_12595 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D SOM08_12590 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D SOM08_01625 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SOM08_14050 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SOM08_12350 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D SOM08_17320 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D SOM08_17800 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D SOM08_10145 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SOM08_15135 msr(E); (GenBank) ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein
D SOM08_04110 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:hydr02060]
D SOM08_21085 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SOM08_21090 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D SOM08_21095 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SOM08_21670 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:hydr03070]
D SOM08_06400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D SOM08_11145 TolC family protein K12340 tolC; outer membrane protein
D SOM08_12355 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D SOM08_17315 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D SOM08_12350 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D SOM08_17320 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D SOM08_04135 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D SOM08_04180 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D SOM08_04125 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D SOM08_04175 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D SOM08_04170 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D SOM08_04165 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D SOM08_04160 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D SOM08_04155 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D SOM08_04150 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D SOM08_04145 gspM; (GenBank) type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D SOM08_04130 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SOM08_07355 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SOM08_21875 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SOM08_21870 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOM08_01795 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOM08_15470 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOM08_19040 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SOM08_21880 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOM08_22445 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOM08_04615 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SOM08_16650 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SOM08_17545 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SOM08_05000 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOM08_04540 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D SOM08_04545 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SOM08_04550 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:hydr02020]
D SOM08_09825 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOM08_09820 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SOM08_09795 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SOM08_13015 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SOM08_13020 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SOM08_03635 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D SOM08_16155 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D SOM08_10135 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SOM08_10130 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SOM08_20505 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D SOM08_20500 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D SOM08_20495 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump
D SOM08_14790 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOM08_16490 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOM08_14795 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SOM08_16485 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SOM08_03925 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D SOM08_03930 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D SOM08_03895 flagellin K02406 fliC; flagellin
D SOM08_03900 flagellin K02406 fliC; flagellin
D SOM08_03905 flagellin K02406 fliC; flagellin
D SOM08_03910 flagellin K02406 fliC; flagellin
D SOM08_03920 flagellin K02406 fliC; flagellin
D SOM08_18600 flagellin K02406 fliC; flagellin
D SOM08_03980 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_10010 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_18695 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_03935 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_18690 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_07800 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SOM08_07795 kdpE; (GenBank) two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SOM08_07815 kdpA; (GenBank) potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D SOM08_07810 kdpB; (GenBank) potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D SOM08_07805 kdpC; (GenBank) potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D SOM08_09265 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SOM08_18130 ATP-binding protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SOM08_09270 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D SOM08_03220 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D SOM08_09285 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D SOM08_14745 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D SOM08_19920 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D SOM08_09280 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D SOM08_14740 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D SOM08_09275 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D SOM08_19910 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D SOM08_16910 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D SOM08_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOM08_03645 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SOM08_03360 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D SOM08_16000 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D SOM08_20700 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D SOM08_16745 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SOM08_16740 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D SOM08_06630 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SOM08_06635 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D SOM08_06655 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_06665 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_06675 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_06670 narJ; (GenBank) nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D SOM08_03770 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SOM08_19975 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SOM08_09370 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SOM08_09385 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SOM08_09380 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D SOM08_09375 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D SOM08_15765 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SOM08_15785 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SOM08_15760 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D SOM08_15755 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D SOM08_15750 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SOM08_15745 type II secretion system F family protein K12510 tadB; tight adherence protein B
D SOM08_15740 type II secretion system F family protein K12511 tadC; tight adherence protein C
D SOM08_11585 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D SOM08_12420 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D SOM08_08315 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SOM08_08320 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SOM08_00570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_00610 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_08305 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_12365 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_15155 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_19645 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_01855 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D SOM08_01860 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D SOM08_00430 sigma-54 dependent transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_04985 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D SOM08_04980 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D SOM08_01630 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SOM08_13910 rpoN; (GenBank) RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SOM08_22150 pilin K02650 pilA; type IV pilus assembly protein PilA
D SOM08_17290 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SOM08_17300 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SOM08_03745 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SOM08_03030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_05055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_11840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_18590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_18775 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22370 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22375 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_04295 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D SOM08_07595 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D SOM08_19965 PAS domain-containing protein K03776 aer; aerotaxis receptor
D SOM08_22380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOM08_03750 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOM08_03755 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOM08_03945 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOM08_03735 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOM08_17140 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D SOM08_17145 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D SOM08_17135 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D SOM08_17155 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D SOM08_17150 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D SOM08_18220 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_18765 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_18770 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_22065 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D SOM08_22060 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D SOM08_00145 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_00320 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_01510 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_03390 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_03515 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_05105 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_06930 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_07120 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_07185 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_08030 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_08175 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_08190 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_09975 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_10900 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_10925 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_11005 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_12265 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_12305 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_13745 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_14310 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_14460 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_15170 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_18235 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_18945 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20050 DctP family TRAP transporter solute-binding subunit K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20330 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20370 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20420 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20620 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_21265 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_00140 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_00310 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_03395 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_03510 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_05110 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_06935 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_07115 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_07175 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_08170 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_08195 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_09970 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_10930 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_11010 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_12260 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_12300 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_13740 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_14315 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_14465 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_18240 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_18950 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_20060 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_20325 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_20615 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_21260 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_00135 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_00305 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_03400 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_03505 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_05115 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_06940 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_07110 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_07180 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_08165 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_08200 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_09965 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_10935 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_11015 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_12255 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_12295 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_13735 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_14320 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_14470 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_18245 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_18955 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_20055 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_20320 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_20610 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_21255 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_08025 TRAP transporter large permease subunit K21393 dctQM; TRAP-type transport system permease protein
D SOM08_07460 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_10610 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_11245 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_13780 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_18405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_20875 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_20960 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_22435 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_04575 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D SOM08_04580 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SOM08_04585 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D SOM08_05775 c-type cytochrome K08738 CYC; cytochrome c
D SOM08_12800 c-type cytochrome K08738 CYC; cytochrome c
D SOM08_12880 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D SOM08_12885 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D SOM08_12890 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D SOM08_12895 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D SOM08_05665 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SOM08_05660 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SOM08_06400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D SOM08_11145 TolC family protein K12340 tolC; outer membrane protein
D SOM08_14525 hybrid sensor histidine kinase/response regulator K19622 phcR; two-component system, response regulator PhcR
D SOM08_11870 XrtA/PEP-CTERM system exopolysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D SOM08_22040 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D SOM08_05435 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SOM08_18215 helix-turn-helix transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D SOM08_10960 ATP-binding protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D SOM08_04000 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOM08_18680 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOM08_01230 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D SOM08_14575 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
D SOM08_11200 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 04146 Peroxisome [PATH:hydr04146]
D SOM08_02945 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D SOM08_19440 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D SOM08_20535 CaiB/BaiF CoA-transferase family protein K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D SOM08_02965 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_03605 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05130 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05445 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_17855 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_18410 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20565 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_21700 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_12845 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D SOM08_13875 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOM08_13885 icd; (GenBank) NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SOM08_02325 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SOM08_13870 Fe-Mn family superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:hydr04148]
D SOM08_18270 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D SOM08_04575 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:hydr02024]
D SOM08_18230 cqsA; (GenBank) alpha-hydroxyketone-type quorum-sensing autoinducer synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D SOM08_18220 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_18765 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_18770 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_13435 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D SOM08_01735 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SOM08_01740 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SOM08_04910 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SOM08_17290 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SOM08_17300 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SOM08_03925 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D SOM08_03930 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D SOM08_07795 kdpE; (GenBank) two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SOM08_18755 helix-turn-helix transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D SOM08_12065 trbJ; (GenBank) P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SOM08_12075 trbL; (GenBank) P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SOM08_11195 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SOM08_11180 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D SOM08_11190 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D SOM08_00065 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_00100 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_02910 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_02980 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_03625 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_09300 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_11230 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_12610 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_13680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_14285 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_14535 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_15500 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_17860 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_17865 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_18080 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_18430 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_20550 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21060 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21625 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_00060 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_00095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_02905 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_02970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_03615 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_07480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_09315 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_11225 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_13675 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_14280 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_14540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_17835 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_18085 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_18420 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_20560 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_21055 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_21620 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_00055 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_00090 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02900 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_02975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_03620 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_07485 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_09320 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_11220 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_13670 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_14275 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_14545 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_17840 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_18090 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_18425 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_20555 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_21050 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_21615 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_00050 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02895 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_03610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_07490 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_09305 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_13665 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_14550 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_17845 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_18070 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_18415 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_20570 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_21045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_21610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_00045 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_00085 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_02890 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_02985 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_03630 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_07495 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_09310 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_11215 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_13660 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_14270 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_14555 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_17850 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_18075 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_18435 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_20575 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_21040 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_21605 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_18215 helix-turn-helix transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D SOM08_02965 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_03605 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05130 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05445 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_17855 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_18410 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20565 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_21700 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_07460 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_10610 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_11245 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_13780 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_18405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_20875 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_20960 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_22435 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_11795 IclR family transcriptional regulator K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D SOM08_09140 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SOM08_08555 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_10150 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_10360 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_20490 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_21460 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_04230 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SOM08_04245 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SOM08_04235 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SOM08_04250 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SOM08_04255 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SOM08_04260 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SOM08_22445 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOM08_22235 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D SOM08_01795 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOM08_15470 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOM08_19040 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SOM08_21880 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOM08_04615 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SOM08_16650 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SOM08_17545 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SOM08_05000 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:hydr02030]
D SOM08_03030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_05055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_11840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_18590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_18775 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22370 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22375 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_04295 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D SOM08_07595 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D SOM08_19965 PAS domain-containing protein K03776 aer; aerotaxis receptor
D SOM08_18870 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D SOM08_03750 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOM08_22380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOM08_03755 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOM08_03945 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOM08_03950 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D SOM08_03735 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOM08_03740 cheD; (GenBank) chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D SOM08_03745 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SOM08_03840 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOM08_18740 FliG C-terminal domain-containing protein K02410 fliG; flagellar motor switch protein FliG
D SOM08_03810 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOM08_18555 FliM/FliN family flagellar motor C-terminal domain-containing protein K02416 fliM; flagellar motor switch protein FliM
D SOM08_03805 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOM08_18560 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D SOM08_03935 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_18690 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_03940 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOM08_18685 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:hydr02040]
D SOM08_03855 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SOM08_18550 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SOM08_03845 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOM08_18745 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOM08_03840 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOM08_18740 FliG C-terminal domain-containing protein K02410 fliG; flagellar motor switch protein FliG
D SOM08_03835 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOM08_18735 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOM08_03830 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOM08_18730 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOM08_03825 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D SOM08_03820 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SOM08_18705 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SOM08_03815 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D SOM08_18700 flagellar basal body protein K02415 fliL; flagellar protein FliL
D SOM08_03810 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOM08_18555 FliM/FliN family flagellar motor C-terminal domain-containing protein K02416 fliM; flagellar motor switch protein FliM
D SOM08_03805 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOM08_18560 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D SOM08_03800 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOM08_03795 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOM08_18565 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOM08_03790 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOM08_18570 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOM08_03785 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOM08_18575 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOM08_03965 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOM08_18585 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOM08_03960 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D SOM08_18580 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SOM08_04005 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SOM08_18665 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SOM08_04010 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SOM08_18660 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SOM08_04015 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SOM08_18655 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SOM08_04020 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOM08_18650 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOM08_04025 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SOM08_18645 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D SOM08_04035 flgF; (GenBank) flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SOM08_18640 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SOM08_04040 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SOM08_18635 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SOM08_04045 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D SOM08_18630 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D SOM08_04050 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D SOM08_18625 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D SOM08_04055 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D SOM08_18620 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SOM08_18670 glucosaminidase domain-containing protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SOM08_04060 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SOM08_18615 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SOM08_04065 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOM08_18610 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOM08_03895 flagellin K02406 fliC; flagellin
D SOM08_03900 flagellin K02406 fliC; flagellin
D SOM08_03905 flagellin K02406 fliC; flagellin
D SOM08_03910 flagellin K02406 fliC; flagellin
D SOM08_03920 flagellin K02406 fliC; flagellin
D SOM08_18600 flagellin K02406 fliC; flagellin
D SOM08_03915 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D SOM08_18720 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D SOM08_03890 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D SOM08_18715 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D SOM08_03885 flagellar protein FliT K02423 fliT; flagellar protein FliT
D SOM08_03935 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_18690 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_03940 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOM08_18685 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOM08_04000 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOM08_18680 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOM08_18675 flgN; (GenBank) flagellar export chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D SOM08_12155 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SOM08_03925 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D SOM08_03930 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D SOM08_01630 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SOM08_13910 rpoN; (GenBank) RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SOM08_03980 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_10010 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_18695 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SOM08_12695 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:hydr04981]
D SOM08_02710 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D SOM08_08330 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SOM08_09180 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SOM08_08335 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SOM08_00830 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOM08_00895 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:hydr04980]
D SOM08_00690 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SOM08_03595 meaB; (GenBank) methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D SOM08_11810 meaB; (GenBank) methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D SOM08_11805 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SOM08_00830 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SOM08_00895 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:hydr01501]
D SOM08_01190 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SOM08_16110 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SOM08_04100 gcvA; (GenBank) transcriptional regulator GcvA K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D SOM08_04105 bla; (GenBank) class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SOM08_06420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_09925 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_10350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_14190 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_06415 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_09930 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_10355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_14195 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_08555 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_10150 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_10360 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_20490 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_21460 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_06400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D SOM08_11145 TolC family protein K12340 tolC; outer membrane protein
D SOM08_04370 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_07160 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_18995 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_01125 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SOM08_17675 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:hydr01502]
D SOM08_17635 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOM08_00995 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SOM08_17665 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SOM08_17660 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOM08_17645 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hydr01503]
D SOM08_21810 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SOM08_11440 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOM08_03635 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D SOM08_16155 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D SOM08_01615 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SOM08_09215 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SOM08_06420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_09925 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_10350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_14190 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_06415 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_09930 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_10355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_14195 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_06400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D SOM08_11145 TolC family protein K12340 tolC; outer membrane protein
D SOM08_13155 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SOM08_03645 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:hydr01000]
C 01001 Protein kinases [BR:hydr01001]
D SOM08_03675 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SOM08_22045 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SOM08_11880 XrtA-associated tyrosine autokinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SOM08_09825 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOM08_13015 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SOM08_10135 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SOM08_14790 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOM08_16490 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOM08_07800 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SOM08_09265 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SOM08_18130 ATP-binding protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SOM08_06630 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SOM08_16415 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D SOM08_16745 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SOM08_08315 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SOM08_01855 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D SOM08_04985 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D SOM08_17290 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SOM08_17375 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D SOM08_03750 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOM08_17135 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D SOM08_18220 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_18765 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_18770 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_22065 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D SOM08_10960 ATP-binding protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D SOM08_21730 sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
C 01009 Protein phosphatases and associated proteins [BR:hydr01009]
D SOM08_02445 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SOM08_18385 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D SOM08_13355 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D SOM08_16510 PP2C family serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D SOM08_22165 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D SOM08_12995 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:hydr01002]
D SOM08_07385 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SOM08_04650 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SOM08_07520 pcp; (GenBank) pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D SOM08_11740 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOM08_12020 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SOM08_00565 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D SOM08_05990 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SOM08_04425 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SOM08_02770 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SOM08_01355 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOM08_05510 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOM08_11910 XrtA/PEP-CTERM system amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOM08_19225 N-acetylglutaminylglutamine amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SOM08_17815 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D SOM08_05885 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SOM08_09720 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D SOM08_16640 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D SOM08_16645 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D SOM08_12600 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SOM08_14125 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SOM08_08055 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SOM08_11590 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SOM08_22275 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SOM08_09735 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SOM08_06585 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D SOM08_01840 M48 family metalloprotease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SOM08_17775 htpX; (GenBank) protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SOM08_22135 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D SOM08_13130 rseP; (GenBank) RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SOM08_09200 M90 family metallopeptidase K09933 mtfA; MtfA peptidase
D SOM08_03635 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D SOM08_16155 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D SOM08_04555 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D SOM08_22235 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D SOM08_21225 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOM08_12470 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D SOM08_19335 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SOM08_13705 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SOM08_14240 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SOM08_14250 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SOM08_13810 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SOM08_16145 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SOM08_17565 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SOM08_14860 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D SOM08_16245 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D SOM08_22090 rhomboid family intramembrane serine protease K28165 rrtA; rhombosortase
D SOM08_14885 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SOM08_17700 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SOM08_08980 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_12165 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_20115 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SOM08_11635 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D SOM08_15570 pmbA; (GenBank) metalloprotease PmbA K03592 pmbA; PmbA protein
D SOM08_04900 tldD; (GenBank) metalloprotease TldD K03568 tldD; TldD protein
D SOM08_13450 hflC; (GenBank) protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D SOM08_13445 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:hydr01003]
D SOM08_04870 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_04370 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_07160 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_18995 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_17650 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_04890 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_17310 mdoH; (GenBank) glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D SOM08_02670 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:hydr01005]
D SOM08_13155 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SOM08_13160 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SOM08_17615 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SOM08_13145 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SOM08_09205 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SOM08_13850 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SOM08_04315 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SOM08_04320 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SOM08_08605 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D SOM08_21810 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SOM08_06380 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D SOM08_12700 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SOM08_13840 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SOM08_22415 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SOM08_22420 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SOM08_06375 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D SOM08_19745 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SOM08_02175 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SOM08_01220 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hydr01011]
D SOM08_04480 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SOM08_05945 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SOM08_17640 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SOM08_17655 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SOM08_17670 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SOM08_17635 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SOM08_00995 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SOM08_14340 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SOM08_14885 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SOM08_17660 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SOM08_17645 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SOM08_15665 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SOM08_15865 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SOM08_04370 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_07160 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_18995 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SOM08_01125 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SOM08_17675 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SOM08_21225 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SOM08_19335 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SOM08_12470 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D SOM08_04870 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_17650 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_04890 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_17815 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D SOM08_02705 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SOM08_22055 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D SOM08_07080 mltB; (GenBank) lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D SOM08_09905 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D SOM08_14710 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SOM08_02460 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SOM08_11440 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOM08_04975 ampD; (GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:hydr01004]
D SOM08_16195 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SOM08_05525 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SOM08_16200 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SOM08_10260 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SOM08_10205 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOM08_16180 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SOM08_02875 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_07365 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_07680 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_09955 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_10275 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_13555 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_16190 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_19935 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SOM08_13150 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SOM08_08550 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOM08_11290 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SOM08_13490 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SOM08_20720 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D SOM08_17805 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D SOM08_07440 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D SOM08_05905 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_11975 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SOM08_13295 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D SOM08_00715 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D SOM08_06765 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D SOM08_06490 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SOM08_19485 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SOM08_02965 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_03605 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05130 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05445 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_17855 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_18410 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20565 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_21700 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_00295 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SOM08_01195 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SOM08_07635 long-chain fatty acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SOM08_10890 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SOM08_11465 fatty acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SOM08_13325 class I adenylate-forming enzyme family protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SOM08_19300 long-chain fatty acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SOM08_16205 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SOM08_05925 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SOM08_02180 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SOM08_17095 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:hydr01008]
D SOM08_09480 type I polyketide synthase K15643 mxaB; myxalamid-type polyketide synthase MxaB
D SOM08_17990 AMP-binding protein K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D SOM08_02260 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:hydr01006]
D SOM08_06920 farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SOM08_04670 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SOM08_13115 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SOM08_09360 hpnD; (GenBank) presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D SOM08_07320 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SOM08_19150 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SOM08_16905 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:hydr01007]
D SOM08_06000 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOM08_07545 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SOM08_09035 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SOM08_02525 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOM08_05365 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SOM08_09225 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOM08_01605 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOM08_17470 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOM08_07390 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOM08_16855 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOM08_21645 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOM08_07500 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOM08_04810 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOM08_13415 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOM08_02165 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SOM08_02170 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SOM08_05050 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOM08_04705 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOM08_12950 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOM08_08990 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOM08_12970 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOM08_12975 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOM08_10540 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SOM08_11865 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SOM08_12575 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D SOM08_14140 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D SOM08_04495 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_10705 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_17105 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SOM08_02305 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SOM08_19595 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SOM08_15880 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SOM08_00605 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SOM08_00575 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D SOM08_02300 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SOM08_00535 transaminase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOM08_06760 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOM08_06845 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOM08_17170 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SOM08_21010 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SOM08_01415 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SOM08_17515 pabB; (GenBank) aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D SOM08_08245 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SOM08_01370 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:hydr00194]
D SOM08_20965 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SOM08_20970 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SOM08_20975 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SOM08_20980 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SOM08_20985 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SOM08_20990 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SOM08_03100 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SOM08_20995 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SOM08_21000 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SOM08_21005 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:hydr03000]
D SOM08_00675 helix-turn-helix transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D SOM08_08115 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D SOM08_13250 ada; (GenBank) bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SOM08_06350 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SOM08_02720 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SOM08_19605 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SOM08_19155 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SOM08_00765 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D SOM08_01600 HTH-type transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D SOM08_12580 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SOM08_06460 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D SOM08_18005 LysR substrate-binding domain-containing protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D SOM08_19905 LysR substrate-binding domain-containing protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D SOM08_20725 LysR substrate-binding domain-containing protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D SOM08_12185 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D SOM08_04100 gcvA; (GenBank) transcriptional regulator GcvA K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D SOM08_03165 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D SOM08_11655 LysR substrate-binding domain-containing protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D SOM08_21430 LysR substrate-binding domain-containing protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D SOM08_05485 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D SOM08_17795 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D SOM08_20510 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D SOM08_20785 LysR substrate-binding domain-containing protein K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
D SOM08_19130 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D SOM08_07165 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SOM08_07270 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SOM08_16015 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SOM08_00560 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SOM08_14040 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SOM08_10915 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D SOM08_12095 FCD domain-containing protein K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D SOM08_21070 GntR family transcriptional regulator K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D SOM08_15100 tetR(C); (GenBank) tetracycline resistance transcriptional repressor TetR(C) K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D SOM08_10345 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D SOM08_18125 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D SOM08_01920 TetR family transcriptional regulator C-terminal domain-containing protein K09017 rutR; TetR/AcrR family transcriptional regulator
D SOM08_17940 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D SOM08_02145 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_02400 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_02765 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_05465 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_19660 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_21890 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_18755 helix-turn-helix transcriptional regulator K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D SOM08_18215 helix-turn-helix transcriptional regulator K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D SOM08_18370 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SOM08_00520 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SOM08_06520 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SOM08_21660 fur; (GenBank) ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SOM08_00360 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D SOM08_05180 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D SOM08_05255 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D SOM08_09450 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D SOM08_12225 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D SOM08_13655 IclR family transcriptional regulator C-terminal domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D SOM08_15050 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D SOM08_11795 IclR family transcriptional regulator K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D SOM08_07460 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_10610 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_11245 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_13780 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_18405 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_20875 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_20960 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_22435 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SOM08_03260 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SOM08_12915 fnr; (GenBank) fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SOM08_15290 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D SOM08_21360 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D SOM08_01095 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SOM08_12780 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D SOM08_17430 helix-turn-helix transcriptional regulator K15546 boxR; XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator
D SOM08_04265 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D SOM08_22225 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SOM08_18980 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D SOM08_00370 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein
D SOM08_19655 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SOM08_02695 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SOM08_14495 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SOM08_00665 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SOM08_16555 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D SOM08_07885 GNAT family N-acetyltransferase K06140 rnk; regulator of nucleoside diphosphate kinase
D SOM08_18925 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D SOM08_17115 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SOM08_08660 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D SOM08_12030 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D SOM08_14905 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D SOM08_17125 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D SOM08_19560 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D SOM08_09175 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D SOM08_17690 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:hydr03021]
D SOM08_05730 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D SOM08_19010 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SOM08_01825 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOM08_01830 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOM08_16530 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SOM08_12155 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SOM08_11985 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SOM08_16170 rpoE; (GenBank) RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SOM08_16810 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SOM08_19855 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SOM08_07510 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D SOM08_01630 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SOM08_13910 rpoN; (GenBank) RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SOM08_03980 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_10010 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_18695 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_11330 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SOM08_09105 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SOM08_01800 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SOM08_04590 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D SOM08_04595 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D SOM08_16165 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D SOM08_16160 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D SOM08_19560 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D SOM08_13200 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D SOM08_16540 greB; (GenBank) transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D SOM08_09840 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:hydr03019]
D SOM08_05420 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D SOM08_14025 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D SOM08_16135 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOM08_13070 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOM08_06590 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SOM08_05715 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SOM08_15690 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SOM08_00820 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SOM08_12695 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOM08_15485 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SOM08_09840 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SOM08_10770 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOM08_04275 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOM08_13435 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D SOM08_09775 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SOM08_10425 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D SOM08_15830 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D SOM08_04700 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SOM08_10635 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D SOM08_16570 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D SOM08_12565 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:hydr03011]
D SOM08_08225 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SOM08_13095 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SOM08_21165 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SOM08_19015 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SOM08_19055 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SOM08_10490 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SOM08_21215 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SOM08_19070 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SOM08_02500 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SOM08_21200 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SOM08_19020 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SOM08_21220 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SOM08_19025 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SOM08_19075 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SOM08_15490 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SOM08_06545 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SOM08_21150 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SOM08_10500 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SOM08_21175 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SOM08_15870 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SOM08_15560 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SOM08_01810 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SOM08_21180 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SOM08_21195 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SOM08_21190 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SOM08_19080 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SOM08_19065 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SOM08_10505 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SOM08_01815 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SOM08_01805 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SOM08_01820 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SOM08_02495 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SOM08_19090 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SOM08_19045 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SOM08_21160 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SOM08_19005 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SOM08_19060 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SOM08_06560 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SOM08_12965 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SOM08_04675 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SOM08_21170 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SOM08_21185 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SOM08_19085 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SOM08_04680 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SOM08_07450 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SOM08_21155 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SOM08_19050 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SOM08_09835 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SOM08_16210 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SOM08_07445 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SOM08_22460 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SOM08_12960 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SOM08_19030 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SOM08_16615 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D SOM08_02070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOM08_02095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOM08_02085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOM08_02110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOM08_02090 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOM08_02115 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:hydr03009]
D SOM08_16135 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOM08_06590 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SOM08_16130 era; (GenBank) GTPase Era K03595 era; GTPase
D SOM08_04685 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D SOM08_19560 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D SOM08_11330 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SOM08_09105 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SOM08_01800 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SOM08_08280 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SOM08_22310 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SOM08_01845 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SOM08_07435 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SOM08_16635 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SOM08_22330 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SOM08_00645 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SOM08_17685 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SOM08_16225 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SOM08_19755 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SOM08_02450 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SOM08_13500 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SOM08_09730 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D SOM08_14015 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SOM08_15020 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SOM08_17720 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SOM08_02490 rlmJ; (GenBank) 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D SOM08_01635 THUMP domain-containing protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D SOM08_00880 RNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SOM08_13395 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SOM08_10065 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SOM08_07720 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SOM08_09000 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SOM08_13385 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SOM08_05425 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SOM08_13375 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SOM08_18395 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D SOM08_19345 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SOM08_06550 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D SOM08_13060 rimO; (GenBank) 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D SOM08_04945 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SOM08_14120 prmB; (GenBank) 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D SOM08_06955 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D SOM08_05420 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D SOM08_14025 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D SOM08_17120 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SOM08_12665 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D SOM08_06575 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SOM08_13430 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D SOM08_07740 ylqF; (GenBank) ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D SOM08_13440 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D SOM08_20825 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SOM08_16535 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SOM08_11340 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D SOM08_11325 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D SOM08_14010 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D SOM08_02570 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D SOM08_09725 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D SOM08_15575 yjgA; (GenBank) ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein
D SOM08_21675 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D SOM08_17220 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D SOM08_16215 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:hydr03016]
D SOM08_02685 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SOM08_06000 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOM08_04705 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SOM08_07390 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SOM08_21645 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOM08_17470 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SOM08_07545 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SOM08_01605 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOM08_07500 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SOM08_04810 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOM08_08990 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SOM08_12950 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SOM08_05050 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SOM08_09225 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SOM08_16855 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SOM08_13415 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SOM08_12970 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SOM08_12975 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SOM08_02525 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOM08_05365 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SOM08_02555 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SOM08_03780 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SOM08_04535 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SOM08_09020 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SOM08_16080 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SOM08_11345 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SOM08_15285 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOM08_20825 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SOM08_07320 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SOM08_22440 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SOM08_00640 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SOM08_11580 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D SOM08_22455 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SOM08_17750 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D SOM08_16505 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D SOM08_04880 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D SOM08_15685 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D SOM08_02165 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SOM08_02170 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SOM08_09035 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SOM08_11780 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D SOM08_17185 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SOM08_07725 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D SOM08_17285 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SOM08_15595 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D SOM08_06555 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SOM08_16970 trmL; (GenBank) tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SOM08_13170 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D SOM08_07720 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SOM08_09000 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SOM08_21735 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SOM08_02620 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D SOM08_16865 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SOM08_15275 iscA; (GenBank) iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D SOM08_14705 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D SOM08_12540 FAD-dependent oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D SOM08_19165 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SOM08_04095 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SOM08_03445 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SOM08_03440 queE; (GenBank) 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SOM08_16825 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SOM08_11450 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SOM08_13485 mnmH; (GenBank) tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D SOM08_19205 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SOM08_09240 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SOM08_19340 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SOM08_15505 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SOM08_11445 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SOM08_14075 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D SOM08_13070 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SOM08_15485 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:hydr03012]
D SOM08_11335 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SOM08_12955 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SOM08_14115 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SOM08_13100 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D SOM08_01785 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SOM08_21205 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SOM08_21210 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D SOM08_04730 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SOM08_13110 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D SOM08_04725 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SOM08_16620 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SOM08_00495 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SOM08_19035 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SOM08_10375 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D SOM08_05890 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D SOM08_07430 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D SOM08_21750 arfB; (GenBank) alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:hydr03110]
D SOM08_13970 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D SOM08_10580 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SOM08_14245 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SOM08_17695 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SOM08_18385 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D SOM08_10770 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOM08_15265 hscA; (GenBank) Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D SOM08_08975 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D SOM08_04275 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOM08_10765 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SOM08_15270 hscB; (GenBank) Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D SOM08_12680 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D SOM08_10775 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D SOM08_03310 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D SOM08_19610 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D SOM08_09260 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D SOM08_04280 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D SOM08_03635 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D SOM08_16155 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D SOM08_09735 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SOM08_21000 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SOM08_09380 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D SOM08_17545 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SOM08_11750 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy
D SOM08_17070 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D SOM08_22235 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D SOM08_09215 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SOM08_09210 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SOM08_12205 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D SOM08_10320 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D SOM08_05040 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D SOM08_06950 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D SOM08_15585 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D SOM08_06680 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D SOM08_14490 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D SOM08_22315 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SOM08_09845 trxA; (GenBank) thioredoxin TrxA K03671 TXN; thioredoxin
D SOM08_02645 trxC; (GenBank) thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D SOM08_19315 trxA; (GenBank) thioredoxin K05838 ybbN; putative thioredoxin
D SOM08_08420 glutaredoxin domain-containing protein K03676 grxC; glutaredoxin 3
D SOM08_17550 grxC; (GenBank) glutaredoxin 3 K03676 grxC; glutaredoxin 3
D SOM08_04720 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D SOM08_01615 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SOM08_12555 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D SOM08_17235 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SOM08_07755 thioredoxin fold domain-containing protein K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:hydr04131]
D SOM08_13390 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SOM08_08515 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D SOM08_22255 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOM08_17560 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOM08_19280 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOM08_18385 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D SOM08_14335 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:hydr03051]
D SOM08_18385 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:hydr03032]
D SOM08_09920 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SOM08_12195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SOM08_12980 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D SOM08_08220 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SOM08_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOM08_10510 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SOM08_12160 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SOM08_08700 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_19500 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_09070 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOM08_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOM08_12605 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOM08_21635 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOM08_14720 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOM08_04190 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_15255 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_09885 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOM08_13165 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SOM08_06880 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOM08_14160 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOM08_15840 hda; (GenBank) DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D SOM08_08250 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SOM08_00015 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SOM08_06995 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SOM08_06990 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SOM08_08705 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D SOM08_22215 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:hydr03036]
D SOM08_16135 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SOM08_05730 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D SOM08_05430 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D SOM08_12195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SOM08_12980 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D SOM08_08220 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SOM08_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SOM08_18510 Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D SOM08_13435 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D SOM08_00765 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D SOM08_01600 HTH-type transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D SOM08_02145 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_02400 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_02765 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_05465 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_19660 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_21890 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SOM08_14150 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D SOM08_17490 ScpA family protein K05896 scpA; segregation and condensation protein A
D SOM08_13380 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D SOM08_17625 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SOM08_12690 septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D SOM08_17675 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SOM08_07465 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SOM08_17680 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL
D SOM08_17630 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D SOM08_17650 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_17620 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOM08_10645 cell division protein ZapA K09888 zapA; cell division protein ZapA
D SOM08_10650 DUF904 domain-containing protein K09892 zapB; cell division protein ZapB
D SOM08_04640 zapD; (GenBank) cell division protein ZapD K18778 zapD; cell division protein ZapD
D SOM08_13350 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D SOM08_11440 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SOM08_06420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_09925 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_10350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_14190 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_00510 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D SOM08_00505 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D SOM08_00500 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D SOM08_18125 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D SOM08_01140 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOM08_01135 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SOM08_01130 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SOM08_04890 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_00655 AAA family ATPase K03496 parA; chromosome partitioning protein
D SOM08_16985 ParA family protein K03496 parA; chromosome partitioning protein
D SOM08_00665 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SOM08_06995 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SOM08_06990 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SOM08_00640 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SOM08_00645 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SOM08_17725 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D SOM08_12645 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D SOM08_17455 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SOM08_04325 yihA; (GenBank) ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:hydr03400]
D SOM08_06345 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SOM08_14630 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SOM08_17130 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SOM08_01765 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SOM08_16575 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SOM08_15315 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SOM08_05730 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D SOM08_04630 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SOM08_06945 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SOM08_13250 ada; (GenBank) bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SOM08_20520 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D SOM08_19350 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SOM08_09230 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SOM08_06350 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SOM08_00300 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SOM08_16585 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SOM08_01170 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D SOM08_08325 xth; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D SOM08_16735 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SOM08_14160 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SOM08_06880 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SOM08_02390 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SOM08_19435 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SOM08_15295 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D SOM08_11965 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D SOM08_06825 3'-5' exonuclease K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SOM08_01825 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SOM08_01830 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SOM08_19010 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SOM08_16530 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SOM08_13000 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SOM08_15645 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SOM08_07335 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D SOM08_13865 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SOM08_06915 xseB; (GenBank) exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SOM08_09070 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SOM08_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SOM08_12605 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SOM08_21635 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SOM08_14720 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SOM08_04190 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_15255 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SOM08_09885 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SOM08_08700 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_19500 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_22190 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D SOM08_02585 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SOM08_02590 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SOM08_04855 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SOM08_01990 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SOM08_10495 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
D SOM08_01425 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D SOM08_19160 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SOM08_16125 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SOM08_09895 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D SOM08_16565 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SOM08_08155 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D SOM08_09855 UvrD-helicase domain-containing protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SOM08_09850 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SOM08_13980 helicase HerA-like domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D SOM08_08250 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SOM08_00015 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SOM08_12195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SOM08_17740 MBL fold metallo-hydrolase K07455 recT; recombination protein RecT
D SOM08_12980 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D SOM08_08220 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SOM08_00820 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SOM08_05430 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D SOM08_16785 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SOM08_13810 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SOM08_03570 imuA; (GenBank) translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA
D SOM08_03565 DNA polymerase Y family protein K14161 imuB; protein ImuB
D SOM08_03560 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D SOM08_22185 recX; (GenBank) recombination regulator RecX K03565 recX; regulatory protein
D SOM08_01965 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D SOM08_05320 UvrD-helicase domain-containing protein K03658 helD; DNA helicase IV [EC:5.6.2.4]
D SOM08_19795 dinG; (GenBank) ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SOM08_04970 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOM08_06685 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SOM08_04965 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:hydr03029]
D SOM08_04580 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SOM08_11335 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SOM08_12955 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SOM08_13100 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D SOM08_01785 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SOM08_21205 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SOM08_21210 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D SOM08_16130 era; (GenBank) GTPase Era K03595 era; GTPase
D SOM08_02525 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SOM08_21645 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SOM08_04810 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SOM08_01605 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SOM08_01150 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SOM08_03405 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SOM08_21030 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SOM08_01155 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SOM08_01145 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SOM08_08700 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_19500 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SOM08_13135 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D SOM08_10770 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOM08_10775 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D SOM08_04275 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOM08_04280 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D SOM08_10765 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SOM08_15285 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SOM08_15270 hscB; (GenBank) Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D SOM08_04720 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D SOM08_17455 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SOM08_16905 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SOM08_16940 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D SOM08_16910 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D SOM08_22445 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOM08_16920 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D SOM08_16900 SCO family protein K07152 SCO1; protein SCO1
D SOM08_18385 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:hydr02000]
D SOM08_14050 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SOM08_12350 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D SOM08_17320 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D SOM08_17800 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D SOM08_06305 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SOM08_15360 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SOM08_15135 msr(E); (GenBank) ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein
D SOM08_10145 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SOM08_04110 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D SOM08_02065 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D SOM08_01050 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SOM08_01065 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SOM08_01045 cysT; (GenBank) sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D SOM08_01040 cysW; (GenBank) sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D SOM08_01035 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SOM08_00385 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D SOM08_11660 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein
D SOM08_00380 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D SOM08_00375 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SOM08_12755 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D SOM08_12745 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D SOM08_12750 phosphate ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D SOM08_00850 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SOM08_15515 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SOM08_00855 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D SOM08_15520 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D SOM08_00860 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SOM08_15525 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SOM08_09900 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOM08_21300 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SOM08_21310 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D SOM08_21305 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SOM08_10185 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SOM08_17055 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D SOM08_11185 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SOM08_17060 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SOM08_00580 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D SOM08_00595 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D SOM08_00590 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D SOM08_00585 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SOM08_11195 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SOM08_11180 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D SOM08_11190 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D SOM08_15320 proX; (GenBank) glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SOM08_15325 proW; (GenBank) glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D SOM08_15330 proV; (GenBank) glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SOM08_00180 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D SOM08_01900 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D SOM08_03480 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D SOM08_03700 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D SOM08_16325 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D SOM08_18795 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D SOM08_00185 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D SOM08_01890 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D SOM08_16335 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D SOM08_18785 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D SOM08_00175 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D SOM08_01895 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D SOM08_03475 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D SOM08_16330 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D SOM08_18790 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D SOM08_10825 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SOM08_18870 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D SOM08_18875 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D SOM08_18880 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SOM08_19100 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D SOM08_19115 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D SOM08_19110 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D SOM08_19125 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D SOM08_19120 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D SOM08_04765 ugpB; (GenBank) sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D SOM08_04760 ugpA; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D SOM08_04755 ugpE; (GenBank) sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D SOM08_04750 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D SOM08_05620 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SOM08_05645 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SOM08_05610 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SOM08_05615 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SOM08_05605 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SOM08_03045 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SOM08_04445 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SOM08_11475 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SOM08_03055 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SOM08_04440 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SOM08_11470 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SOM08_03050 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SOM08_04435 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SOM08_04455 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SOM08_04460 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D SOM08_10820 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SOM08_10815 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D SOM08_10810 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SOM08_09795 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SOM08_09800 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D SOM08_09805 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D SOM08_09810 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SOM08_06750 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D SOM08_12735 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D SOM08_20075 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D SOM08_06745 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D SOM08_11555 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D SOM08_11560 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D SOM08_20085 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D SOM08_06755 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SOM08_11565 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SOM08_20080 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SOM08_00275 glnH; (GenBank) glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D SOM08_00270 glnP; (GenBank) glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein
D SOM08_00265 glnQ; (GenBank) glutamine ABC transporter ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SOM08_07630 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D SOM08_07625 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D SOM08_07620 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D SOM08_07615 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SOM08_14835 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D SOM08_14845 ABC transporter permease subunit K10023 aotM; arginine/ornithine transport system permease protein
D SOM08_14840 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D SOM08_14855 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D SOM08_00065 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_00100 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_02910 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_02980 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_03625 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_09300 substrate-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_11230 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_12610 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_13680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_14285 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_14535 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_15500 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_17860 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_17865 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_18080 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_18430 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_20550 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21035 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21060 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_21625 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SOM08_00060 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_00095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_02905 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_02970 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_03615 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_07480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_09315 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_11225 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_13675 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_14280 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_14540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_17835 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_18085 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_18420 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_20560 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_21055 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_21620 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SOM08_00055 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_00090 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02900 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_02975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_03620 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_07485 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_09320 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_11220 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_13670 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_14275 branched-chain amino acid ABC transporter ATP-binding protein/permease K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_14545 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_17840 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_18090 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_18425 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_20555 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_21050 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_21615 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SOM08_00050 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02895 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_02960 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_03610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_07490 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_09305 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_13665 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_14550 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_17845 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_18070 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_18415 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_20570 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_21045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_21610 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SOM08_00045 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_00085 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_02890 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_02985 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_03630 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_07495 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_09310 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_11215 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_13660 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_14270 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_14555 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_17850 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_18075 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_18435 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_20575 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_21040 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_21605 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SOM08_08085 ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D SOM08_16395 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D SOM08_21525 substrate-binding domain-containing protein K11959 urtA; urea transport system substrate-binding protein
D SOM08_08090 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein
D SOM08_16390 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D SOM08_21530 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein
D SOM08_08095 branched-chain amino acid ABC transporter permease K11961 urtC; urea transport system permease protein
D SOM08_16385 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D SOM08_21535 ATP-binding cassette domain-containing protein K11961 urtC; urea transport system permease protein
D SOM08_08100 ATP-binding cassette domain-containing protein K11962 urtD; urea transport system ATP-binding protein
D SOM08_16380 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D SOM08_08105 ATP-binding cassette domain-containing protein K11963 urtE; urea transport system ATP-binding protein
D SOM08_16375 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D SOM08_21540 ATP-binding cassette domain-containing protein K11963 urtE; urea transport system ATP-binding protein
D SOM08_20790 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SOM08_20810 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D SOM08_20815 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D SOM08_20820 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SOM08_04230 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SOM08_04245 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SOM08_04235 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SOM08_04250 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SOM08_04255 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SOM08_04260 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SOM08_11295 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D SOM08_11300 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D SOM08_11305 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D SOM08_11310 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D SOM08_05685 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D SOM08_05680 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D SOM08_05675 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D SOM08_10665 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SOM08_10675 helical backbone metal receptor K25034 btuF; cobalamin transport system substrate-binding protein
D SOM08_10680 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D SOM08_10685 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D SOM08_10110 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D SOM08_10120 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D SOM08_10115 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SOM08_13590 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D SOM08_12595 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D SOM08_12590 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D SOM08_01625 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SOM08_18335 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D SOM08_18330 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D SOM08_16725 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D SOM08_16720 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SOM08_04470 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SOM08_05085 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SOM08_08570 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SOM08_11155 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SOM08_11160 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SOM08_04465 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOM08_05080 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SOM08_05015 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SOM08_09420 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SOM08_15340 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SOM08_07315 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SOM08_09425 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SOM08_13495 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SOM08_10845 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SOM08_17755 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D SOM08_08390 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D SOM08_06645 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D SOM08_06650 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D SOM08_00990 lplT; (GenBank) lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D SOM08_01190 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SOM08_15105 tet(C); (GenBank) tetracycline efflux MFS transporter Tet(C) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D SOM08_07325 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SOM08_11125 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SOM08_13720 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SOM08_21290 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D SOM08_21470 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D SOM08_03555 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D SOM08_14335 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D SOM08_21085 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SOM08_21090 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D SOM08_21095 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SOM08_21670 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D SOM08_00915 amt; (GenBank) ammonium transporter K03320 amt; ammonium transporter, Amt family
D SOM08_01090 ammonium transporter K03320 amt; ammonium transporter, Amt family
D SOM08_01545 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_01665 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_02040 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_02690 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_09340 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_10740 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_11400 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_17080 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_18935 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_20110 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_22210 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SOM08_04590 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D SOM08_15945 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D SOM08_10075 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D SOM08_04570 mscL; (GenBank) large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D SOM08_07345 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D SOM08_02665 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D SOM08_03935 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_18690 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_03940 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOM08_18685 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOM08_10090 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D SOM08_13860 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D SOM08_10085 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D SOM08_13855 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D SOM08_09090 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D SOM08_09085 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR
D SOM08_01550 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D SOM08_21690 corA; (GenBank) magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D SOM08_08150 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D SOM08_05725 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SOM08_10400 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SOM08_17745 porin family protein K16079 omp31; outer membrane immunogenic protein
D SOM08_08255 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D SOM08_09375 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D SOM08_10430 catecholate siderophore receptor Fiu K16090 fiu; catecholate siderophore receptor
D SOM08_10655 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D SOM08_11130 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D SOM08_05695 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SOM08_11165 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SOM08_18500 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SOM08_06400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D SOM08_11145 TolC family protein K12340 tolC; outer membrane protein
D SOM08_03145 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
D SOM08_08555 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_10150 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_10360 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_20490 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_21460 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_14185 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system
D SOM08_11870 XrtA/PEP-CTERM system exopolysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D SOM08_22040 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D SOM08_13135 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D SOM08_13425 bamB; (GenBank) outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D SOM08_06965 bamC; (GenBank) outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D SOM08_13370 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D SOM08_21655 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D SOM08_17025 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA
D SOM08_17030 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D SOM08_01620 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D SOM08_22410 lptC; (GenBank) LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D SOM08_22320 lptD; (GenBank) LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D SOM08_21640 lptE; (GenBank) LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D SOM08_02155 transporter associated domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D SOM08_00960 CidA/LrgA family protein K06518 cidA; holin-like protein
D SOM08_06890 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter
D SOM08_10760 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D SOM08_03150 efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump
D SOM08_10025 multidrug efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump
D SOM08_11395 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D SOM08_06415 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_09930 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_10355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_14195 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_20500 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D SOM08_20495 efflux RND transporter permease subunit K07789 mdtC; multidrug efflux pump
D SOM08_22250 SMR family transporter K03297 emrE; small multidrug resistance pump
D SOM08_06515 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D SOM08_20255 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D SOM08_19825 BCCT family transporter K05020 opuD; glycine betaine transporter
D SOM08_22265 hypothetical protein K07301 yrbG; cation:H+ antiporter
D SOM08_10460 VC_2705 family sodium/solute symporter K14393 actP; cation/acetate symporter
D SOM08_10485 sodium:solute symporter family protein K14393 actP; cation/acetate symporter
D SOM08_06430 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D SOM08_18800 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D SOM08_10410 ybaL; (GenBank) YbaL family putative K(+) efflux transporter K26735 KEA4_5_6; K+:H+ antiporter
D SOM08_00885 cation:proton antiporter K26731 CHX; K+:H+ antiporter
D SOM08_02240 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D SOM08_02235 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D SOM08_00705 solute carrier family 23 protein K09016 rutG; putative pyrimidine permease RutG
D SOM08_06695 nucleobase:cation symporter-2 family protein K24206 uacT; uric acid transporter
D SOM08_14035 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D SOM08_21350 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D SOM08_19495 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D SOM08_04905 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter
D SOM08_13535 chromate transporter K07240 chrA; chromate transporter
D SOM08_13540 chromate transporter K07240 chrA; chromate transporter
D SOM08_12760 sulP; (GenBank) sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D SOM08_17480 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D SOM08_19945 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D SOM08_00145 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_00320 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_01510 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_03390 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_03515 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_05105 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_06930 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_07120 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_07185 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_08030 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_08175 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_08190 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_09975 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_10900 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_10925 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_11005 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_12265 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_12305 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_13745 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_14310 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_14460 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_15170 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_18235 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_18945 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20050 DctP family TRAP transporter solute-binding subunit K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20330 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20370 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20420 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_20620 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_21265 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D SOM08_00140 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_00310 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_03395 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_03510 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_05110 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_06935 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_07115 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_07175 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_08170 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_08195 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_09970 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_10930 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_11010 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_12260 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_12300 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_13740 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_14315 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_14465 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_18240 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_18950 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_20060 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_20325 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_20615 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_21260 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D SOM08_00135 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_00305 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_03400 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_03505 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_05115 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_06940 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_07110 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_07180 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_08165 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_08200 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_09965 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_10935 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_11015 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_12255 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_12295 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_13735 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_14320 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_14470 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_18245 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D SOM08_18955 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_20055 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_20320 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_20610 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_21255 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D SOM08_08025 TRAP transporter large permease subunit K21393 dctQM; TRAP-type transport system permease protein
D SOM08_01105 arsB; (GenBank) ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D SOM08_00435 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D SOM08_00440 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D SOM08_00445 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D SOM08_00450 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D SOM08_00455 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D SOM08_00460 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D SOM08_00390 mbhE; (GenBank) hydrogen gas-evolving membrane-bound hydrogenase subunit E K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D SOM08_00395 MnhB domain-containing protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D SOM08_00400 NADH-quinone oxidoreductase subunit K K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D SOM08_00405 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D SOM08_00410 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D SOM08_00415 monovalent cation/H+ antiporter complex subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D SOM08_15865 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SOM08_01970 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D SOM08_06530 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D SOM08_12620 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D SOM08_10370 AEC family transporter K24180 mleP; malate permease and related proteins
D SOM08_21370 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D SOM08_01595 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D SOM08_00485 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D SOM08_10980 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D SOM08_00650 LysE family translocator K11250 leuE; leucine efflux protein
D SOM08_21835 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D SOM08_21830 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D SOM08_03220 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D SOM08_09285 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D SOM08_14745 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D SOM08_19920 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D SOM08_09280 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D SOM08_14740 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D SOM08_09275 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D SOM08_19910 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D SOM08_07960 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D SOM08_19820 MarC family protein K05595 marC; multiple antibiotic resistance protein
D SOM08_17650 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SOM08_08515 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D SOM08_16405 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D SOM08_04875 TonB family protein K03832 tonB; periplasmic protein TonB
D SOM08_10095 energy transducer TonB K03832 tonB; periplasmic protein TonB
D SOM08_16280 hypothetical protein K03832 tonB; periplasmic protein TonB
D SOM08_17050 hypothetical protein K03832 tonB; periplasmic protein TonB
D SOM08_14060 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D SOM08_09080 tolA; (GenBank) cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D SOM08_14055 tolB; (GenBank) Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D SOM08_12375 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D SOM08_06655 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_06665 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_06675 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SOM08_21465 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D SOM08_12355 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D SOM08_17315 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D SOM08_03155 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D SOM08_10020 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D SOM08_11390 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D SOM08_06420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_09925 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_10350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_14190 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_20505 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D SOM08_10140 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D SOM08_22045 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SOM08_11880 XrtA-associated tyrosine autokinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SOM08_11875 XrtA system polysaccharide chain length determinant K25590 epsF; protein tyrosine kinase modulator
D SOM08_19740 BON domain-containing protein K28369 dolP; outer membrane lipoprotein DolP
D SOM08_21500 TspO/MBR family protein K05770 TSPO; translocator protein
D SOM08_03040 ABC-type transport auxiliary lipoprotein family protein K09857 pqiC; intermembrane transport lipoprotein PqiC
D SOM08_03530 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D SOM08_16285 uraH; (GenBank) hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:hydr02044]
D SOM08_12350 ATP-binding cassette domain-containing protein K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D SOM08_17320 type I secretion system permease/ATPase K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D SOM08_12355 HlyD family efflux transporter periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D SOM08_17315 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D
D SOM08_06400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D SOM08_11145 TolC family protein K12340 tolC; outer membrane protein
D SOM08_13600 AAA family ATPase K02450 gspA; general secretion pathway protein A
D SOM08_13595 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B
D SOM08_04180 type II secretion system protein N K02452 gspC; general secretion pathway protein C
D SOM08_04135 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D SOM08_04130 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SOM08_07355 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SOM08_04125 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D SOM08_04175 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D SOM08_04170 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D SOM08_04165 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D SOM08_04160 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D SOM08_04155 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D SOM08_04150 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D SOM08_04145 gspM; (GenBank) type II secretion system protein GspM K02462 gspM; general secretion pathway protein M
D SOM08_04140 gspN; (GenBank) type II secretion system protein N K02463 gspN; general secretion pathway protein N
D SOM08_04650 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SOM08_22150 pilin K02650 pilA; type IV pilus assembly protein PilA
D SOM08_04660 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D SOM08_04655 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D SOM08_09125 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D SOM08_09145 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D SOM08_13400 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D SOM08_17155 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D SOM08_17150 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D SOM08_17145 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D SOM08_17140 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D SOM08_04375 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D SOM08_04380 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D SOM08_04385 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D SOM08_04390 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D SOM08_04395 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D SOM08_19670 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D SOM08_14130 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D SOM08_19675 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D SOM08_09165 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D SOM08_09160 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D SOM08_09130 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D SOM08_09155 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D SOM08_09135 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D SOM08_09150 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D SOM08_14725 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D SOM08_09170 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D SOM08_16075 FimV/HubP family polar landmark protein K08086 fimV; pilus assembly protein FimV
D SOM08_15760 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D SOM08_15755 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D SOM08_15750 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SOM08_15745 type II secretion system F family protein K12510 tadB; tight adherence protein B
D SOM08_15740 type II secretion system F family protein K12511 tadC; tight adherence protein C
D SOM08_15765 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SOM08_15785 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SOM08_13080 YggT family protein K02221 yggT; YggT family protein
D SOM08_04225 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D SOM08_07045 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D SOM08_03965 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOM08_18585 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOM08_03960 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D SOM08_18580 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SOM08_03845 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOM08_18745 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOM08_03835 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOM08_18735 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOM08_03830 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOM08_18730 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOM08_03805 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOM08_18560 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D SOM08_03800 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOM08_03795 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOM08_18565 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOM08_03790 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOM08_18570 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOM08_03785 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOM08_18575 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOM08_08665 ParA family protein K12055 K12055; chromosome partitioning related protein ParA
D SOM08_08910 mobH; (GenBank) MobH family relaxase K12070 traI; conjugal transfer pilus assembly protein TraI
D SOM08_08805 traD; (GenBank) type IV conjugative transfer system coupling protein TraD K12071 traD; conjugal transfer pilus assembly protein TraD
D SOM08_17235 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SOM08_12065 trbJ; (GenBank) P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SOM08_12075 trbL; (GenBank) P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SOM08_09380 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D SOM08_09375 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D SOM08_09370 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SOM08_09385 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SOM08_04615 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SOM08_17545 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SOM08_21875 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SOM08_01795 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SOM08_21870 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SOM08_15470 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SOM08_19040 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SOM08_05000 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SOM08_16650 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SOM08_21880 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SOM08_22445 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SOM08_04540 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D SOM08_04545 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SOM08_04550 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:hydr02042]
D SOM08_05725 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SOM08_10400 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:hydr02022]
D SOM08_09825 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SOM08_09820 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SOM08_13015 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SOM08_13020 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SOM08_10135 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SOM08_10130 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SOM08_14790 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOM08_16490 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOM08_14795 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SOM08_16485 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SOM08_07800 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SOM08_07795 kdpE; (GenBank) two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SOM08_09265 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SOM08_18130 ATP-binding protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SOM08_09270 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D SOM08_11760 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D SOM08_15700 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SOM08_18135 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D SOM08_21820 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D SOM08_22200 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D SOM08_06630 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SOM08_06635 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D SOM08_03770 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SOM08_19975 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SOM08_16415 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D SOM08_16745 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SOM08_16740 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D SOM08_08315 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SOM08_08320 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SOM08_01855 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D SOM08_01860 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D SOM08_00430 sigma-54 dependent transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D SOM08_04985 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D SOM08_04980 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D SOM08_17290 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SOM08_17300 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SOM08_17375 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D SOM08_03750 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOM08_03755 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOM08_03945 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOM08_03735 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOM08_17135 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D SOM08_17155 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D SOM08_17150 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D SOM08_18220 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_18765 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_18770 HAMP domain-containing sensor histidine kinase K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D SOM08_22065 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D SOM08_22060 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D SOM08_14525 hybrid sensor histidine kinase/response regulator K19622 phcR; two-component system, response regulator PhcR
D SOM08_10960 ATP-binding protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D SOM08_21730 sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
C 02035 Bacterial motility proteins [BR:hydr02035]
D SOM08_03750 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SOM08_22380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D SOM08_03740 cheD; (GenBank) chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D SOM08_03745 CheR family methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SOM08_03735 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SOM08_03755 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOM08_03945 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SOM08_03950 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D SOM08_03030 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_05055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_11840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_18590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_18775 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22335 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22365 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22370 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_22375 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SOM08_04295 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D SOM08_07595 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D SOM08_19965 PAS domain-containing protein K03776 aer; aerotaxis receptor
D SOM08_03835 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOM08_18735 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SOM08_03830 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOM08_18730 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SOM08_03825 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D SOM08_03800 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SOM08_03795 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOM08_18565 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SOM08_03790 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOM08_18570 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SOM08_03785 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOM08_18575 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SOM08_03965 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOM08_18585 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SOM08_03960 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D SOM08_18580 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SOM08_03840 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SOM08_18740 FliG C-terminal domain-containing protein K02410 fliG; flagellar motor switch protein FliG
D SOM08_03810 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SOM08_18555 FliM/FliN family flagellar motor C-terminal domain-containing protein K02416 fliM; flagellar motor switch protein FliM
D SOM08_03805 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SOM08_18560 FliM/FliN family flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D SOM08_03845 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOM08_18745 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D SOM08_04050 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D SOM08_18625 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D SOM08_04005 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SOM08_18665 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SOM08_04045 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D SOM08_18630 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D SOM08_03815 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D SOM08_18700 flagellar basal body protein K02415 fliL; flagellar protein FliL
D SOM08_03855 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SOM08_18550 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SOM08_03820 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SOM08_18705 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SOM08_04010 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SOM08_18660 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SOM08_04015 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SOM08_18655 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SOM08_04020 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOM08_18650 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SOM08_04035 flgF; (GenBank) flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SOM08_18640 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SOM08_04040 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SOM08_18635 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SOM08_04055 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D SOM08_18620 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SOM08_18670 glucosaminidase domain-containing protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SOM08_04025 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SOM08_18645 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D SOM08_04060 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SOM08_18615 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SOM08_04065 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOM08_18610 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D SOM08_18675 flgN; (GenBank) flagellar export chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D SOM08_03895 flagellin K02406 fliC; flagellin
D SOM08_03900 flagellin K02406 fliC; flagellin
D SOM08_03905 flagellin K02406 fliC; flagellin
D SOM08_03910 flagellin K02406 fliC; flagellin
D SOM08_03920 flagellin K02406 fliC; flagellin
D SOM08_18600 flagellin K02406 fliC; flagellin
D SOM08_03915 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D SOM08_18720 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D SOM08_03890 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D SOM08_18715 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D SOM08_03885 flagellar protein FliT K02423 fliT; flagellar protein FliT
D SOM08_03925 flhD; (GenBank) flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D SOM08_03930 flhC; (GenBank) flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D SOM08_03980 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_10010 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_18695 fliA; (GenBank) RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D SOM08_03935 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_18690 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SOM08_03940 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOM08_18685 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SOM08_04000 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOM08_18680 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SOM08_03970 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D SOM08_17155 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D SOM08_17150 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D SOM08_17145 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D SOM08_17140 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D SOM08_17135 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D SOM08_04980 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D SOM08_04985 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D SOM08_19670 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D SOM08_14130 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D SOM08_19675 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D SOM08_22150 pilin K02650 pilA; type IV pilus assembly protein PilA
D SOM08_04660 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D SOM08_04655 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D SOM08_04650 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SOM08_13400 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D SOM08_04395 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D SOM08_04390 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D SOM08_04385 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D SOM08_04380 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D SOM08_04375 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D SOM08_14725 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D SOM08_09165 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D SOM08_09160 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D SOM08_09130 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D SOM08_09155 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D SOM08_09135 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D SOM08_09150 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D SOM08_09125 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D SOM08_09145 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D SOM08_15765 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SOM08_15785 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SOM08_15760 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D SOM08_15755 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D SOM08_15750 ATPase, T2SS/T4P/T4SS family K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SOM08_09380 fimbria/pilus periplasmic chaperone K07346 fimC; fimbrial chaperone protein
D SOM08_09375 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D SOM08_09370 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SOM08_09385 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:hydr04812]
D SOM08_01140 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOM08_17620 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOM08_17625 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SOM08_00510 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D SOM08_00505 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D SOM08_00500 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D SOM08_00655 AAA family ATPase K03496 parA; chromosome partitioning protein
D SOM08_16985 ParA family protein K03496 parA; chromosome partitioning protein
D SOM08_00665 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:hydr04147]
D SOM08_18385 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D SOM08_12695 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SOM08_22255 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SOM08_21805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SOM08_19280 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SOM08_09215 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SOM08_04275 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SOM08_10770 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SOM08_07290 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SOM08_05150 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D SOM08_12015 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SOM08_01785 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SOM08_21205 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SOM08_03780 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SOM08_04535 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SOM08_10845 bile acid:sodium symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SOM08_02965 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_03605 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05130 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_05445 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_17855 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_18410 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20565 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_20590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_21700 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D SOM08_02215 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_07710 bktB; (GenBank) beta-ketothiolase BktB K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_12125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_13565 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_14290 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20450 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_20660 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SOM08_02445 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SOM08_13835 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SOM08_22425 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SOM08_16750 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SOM08_05960 argG; (GenBank) argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SOM08_00120 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D SOM08_05880 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SOM08_19135 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SOM08_00570 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_00610 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_08305 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_12365 hypothetical protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_15155 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_19645 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SOM08_01555 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SOM08_02140 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SOM08_06580 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D SOM08_13800 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOM08_20045 C-terminal binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SOM08_17175 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SOM08_06585 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D SOM08_13235 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_13345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SOM08_07130 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D SOM08_20710 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D SOM08_15375 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SOM08_07310 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SOM08_15475 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SOM08_17560 gpmA; (GenBank) 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SOM08_15030 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:hydr02048]
D SOM08_00245 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SOM08_00240 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SOM08_00235 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SOM08_05210 restriction endonuclease K07448 mrr; restriction system protein
D SOM08_07950 restriction endonuclease K07448 mrr; restriction system protein
D SOM08_08900 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D SOM08_08905 type II toxin-antitoxin system PrlF family antitoxin K19156 prlF; antitoxin PrlF
D SOM08_09630 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D SOM08_09625 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D SOM08_03675 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SOM08_17620 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOM08_01140 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SOM08_06995 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SOM08_06990 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SOM08_06000 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SOM08_16040 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D SOM08_15285 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:hydr04052]
D SOM08_18200 acyl-CoA-binding protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:hydr01504]
D SOM08_00470 AAC(3)-I family aminoglycoside N-acetyltransferase K03395 aac3-I; aminoglycoside 3-N-acetyltransferase I [EC:2.3.1.60]
D SOM08_15090 aph(3'')-Ib; (GenBank) aminoglycoside O-phosphotransferase APH(3'')-Ib K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87]
D SOM08_15085 aminoglycoside O-phosphotransferase APH(6)-Id K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D SOM08_15105 tet(C); (GenBank) tetracycline efflux MFS transporter Tet(C) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D SOM08_15135 msr(E); (GenBank) ABC-F type ribosomal protection protein Msr(E) K18231 msr; macrolide transport system ATP-binding/permease protein
D SOM08_15130 Mph(E) family macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase
D SOM08_08380 catB; (GenBank) type B chloramphenicol O-acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D SOM08_15070 sul2; (GenBank) sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D SOM08_03555 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D SOM08_04105 bla; (GenBank) class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SOM08_14790 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOM08_16490 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SOM08_14795 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SOM08_16485 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SOM08_03645 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SOM08_06420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_09925 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_10350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_14190 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SOM08_06415 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_09930 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_10355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_14195 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SOM08_08555 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_10150 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_10360 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_20490 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_21460 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D SOM08_11390 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D SOM08_11395 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D SOM08_00520 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SOM08_06400 TolC family outer membrane protein K12340 tolC; outer membrane protein
D SOM08_11145 TolC family protein K12340 tolC; outer membrane protein
D SOM08_03165 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D SOM08_03155 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D SOM08_10020 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D SOM08_03150 efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump
D SOM08_10025 multidrug efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump
D SOM08_03145 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:hydr03100]
D SOM08_02080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOM08_02105 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOM08_06005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOM08_06800 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SOM08_13710 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOM08_16545 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOM08_17035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOM08_20920 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SOM08_12495 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SOM08_06015 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SOM08_14260 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SOM08_16605 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SOM08_06010 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SOM08_01775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOM08_08930 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOM08_14255 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SOM08_12210 tRNA-His K14226 tRNA-His; tRNA His
D SOM08_02075 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SOM08_02100 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SOM08_13065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_14230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_14325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_15465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_16880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SOM08_14080 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SOM08_16550 tRNA-Ile K14230 tRNA-Met; tRNA Met
D SOM08_17270 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOM08_19000 tRNA-Met K14230 tRNA-Met; tRNA Met
D SOM08_01865 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SOM08_04665 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOM08_12990 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOM08_13715 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SOM08_05350 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOM08_09250 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOM08_11265 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOM08_16465 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SOM08_01780 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOM08_04600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOM08_05875 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SOM08_01790 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SOM08_01770 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SOM08_12200 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOM08_13050 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOM08_15250 tRNA-Val K14237 tRNA-Val; tRNA Val
D SOM08_02070 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOM08_02095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SOM08_02085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOM08_02110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SOM08_02090 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOM08_02115 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SOM08_17750 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D SOM08_08270 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D SOM08_09880 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SOM08_04300 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D SOM08_07715 SDR family NAD(P)-dependent oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D SOM08_09980 denD; (GenBank) D-erythronate dehydrogenase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D SOM08_03420 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D SOM08_04895 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D SOM08_10795 ltnD; (GenBank) L-threonate dehydrogenase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D SOM08_03325 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D SOM08_08020 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D SOM08_03330 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D SOM08_08015 transketolase C-terminal domain-containing protein K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D SOM08_11540 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D SOM08_17085 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D SOM08_07880 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D SOM08_12285 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D SOM08_07870 xanthine dehydrogenase family protein subunit M K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D SOM08_12280 xanthine dehydrogenase family protein subunit M K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D SOM08_07875 xanthine dehydrogenase family protein molybdopterin-binding subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D SOM08_16355 indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D SOM08_21550 indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D SOM08_16360 indolepyruvate oxidoreductase subunit beta family protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D SOM08_21555 indolepyruvate oxidoreductase subunit beta family protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D SOM08_21885 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D SOM08_14600 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D SOM08_20160 iron-containing redox enzyme family protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D SOM08_18315 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D SOM08_20415 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D SOM08_18310 molybdopterin cofactor-binding domain-containing protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D SOM08_20410 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D SOM08_08460 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D SOM08_09040 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D SOM08_06465 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SOM08_07375 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SOM08_09610 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SOM08_10040 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SOM08_11055 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SOM08_20385 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SOM08_10440 ahpF; (GenBank) alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D SOM08_06445 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SOM08_14515 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SOM08_02245 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SOM08_13765 glutathione binding-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SOM08_19385 glutathione binding-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SOM08_20350 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SOM08_04345 msrP; (GenBank) protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D SOM08_11260 cytochrome b K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D SOM08_10530 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SOM08_21330 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SOM08_10435 ahpC; (GenBank) alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D SOM08_18375 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SOM08_09050 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SOM08_11370 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SOM08_02265 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D SOM08_20310 Rieske 2Fe-2S domain-containing protein K21323 mdpJ; tert-butyl alcohol monooxygenase / tert-amyl alcohol desaturase [EC:1.14.13.229 1.14.19.48]
D SOM08_14805 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D SOM08_09355 hpnE; (GenBank) hydroxysqualene dehydroxylase HpnE K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D SOM08_06455 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SOM08_12550 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SOM08_20885 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SOM08_03665 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SOM08_01100 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D SOM08_06410 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SOM08_10050 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SOM08_02005 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SOM08_05850 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SOM08_19840 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SOM08_19880 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SOM08_16005 tam; (GenBank) trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D SOM08_02160 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D SOM08_00250 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D SOM08_04075 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D SOM08_12485 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D SOM08_07085 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D SOM08_12480 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D SOM08_07775 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D SOM08_12820 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SOM08_07200 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SOM08_10170 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SOM08_10790 otnK; (GenBank) 3-oxo-tetronate kinase K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D SOM08_20800 four-carbon acid sugar kinase family protein K23247 oiaK; 3-oxoisoapionate kinase [EC:2.7.1.231]
D SOM08_10445 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SOM08_22085 glnE; (GenBank) bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D SOM08_14100 retron St85 family RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D SOM08_14520 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D SOM08_21665 hprK; (GenBank) HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SOM08_20190 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D SOM08_08475 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SOM08_09095 ybgC; (GenBank) tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SOM08_10310 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SOM08_15615 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SOM08_05390 3',5'-nucleoside bisphosphate phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D SOM08_09780 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D SOM08_20295 sulfatase-like hydrolase/transferase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D SOM08_14730 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SOM08_16710 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SOM08_14180 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SOM08_21850 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SOM08_22070 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D SOM08_16220 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D SOM08_07095 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SOM08_15955 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SOM08_20795 ribulose-bisphosphate carboxylase large subunit family protein K01559 oiaT; 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase [EC:3.7.1.28]
D SOM08_00660 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D SOM08_09985 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D SOM08_13085 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D SOM08_00170 sugar phosphate isomerase/epimerase family protein K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D SOM08_03215 sugar phosphate isomerase/epimerase family protein K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D SOM08_10785 otnI; (GenBank) 2-oxo-tetronate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D SOM08_18255 icmF; (GenBank) fused isobutyryl-CoA mutase/GTPase IcmF K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D SOM08_03590 acyl-CoA mutase large subunit family protein K25822 pcmA; pivalyl-CoA mutase large subunit [EC:5.4.99.-]
D SOM08_03585 cobalamin-dependent protein K25823 pcmB; pivalyl-CoA mutase small subunit [EC:5.4.99.-]
D SOM08_10875 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D SOM08_14295 feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D SOM08_02880 AMP-binding protein K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D SOM08_06310 cphA; (GenBank) cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D SOM08_06315 cphA; (GenBank) cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D SOM08_04920 mpl; (GenBank) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D SOM08_11850 rsxB; (GenBank) electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D SOM08_12870 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D SOM08_11415 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SOM08_05750 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D SOM08_17895 mgtA; (GenBank) magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D SOM08_17335 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D SOM08_06450 fdxA; (GenBank) ferredoxin FdxA K05524 fdxA; ferredoxin
D SOM08_12505 fdxA; (GenBank) ferredoxin FdxA K05524 fdxA; ferredoxin
D SOM08_20880 fdxA; (GenBank) ferredoxin FdxA K05524 fdxA; ferredoxin
D SOM08_15280 iscU; (GenBank) Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D SOM08_07125 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D SOM08_20705 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D SOM08_14610 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D SOM08_16840 VOC family protein K08234 yaeR; glyoxylase I family protein
D SOM08_14030 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D SOM08_19665 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D SOM08_17015 GNAT family protein K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D SOM08_08215 lipopolysaccharide assembly protein LapA domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
D SOM08_08210 lapB; (GenBank) lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D SOM08_01280 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
D SOM08_15630 lysylphosphatidylglycerol synthase domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D SOM08_05415 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein
D SOM08_04795 ubiB; (GenBank) ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D SOM08_04790 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D SOM08_10555 mobB; (GenBank) molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D SOM08_00635 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D SOM08_08120 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D SOM08_00210 DoxX family protein K15977 K15977; putative oxidoreductase
D SOM08_09055 DoxX family protein K15977 K15977; putative oxidoreductase
D SOM08_16685 DoxX family protein K15977 K15977; putative oxidoreductase
D SOM08_05455 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
D SOM08_03295 acetate--CoA ligase family protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SOM08_00910 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D SOM08_14655 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D SOM08_08565 rbbA; (GenBank) ribosome-associated ATPase/putative transporter RbbA K13926 rbbA; ribosome-dependent ATPase
D SOM08_08620 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D SOM08_10755 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D SOM08_04845 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D SOM08_16715 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D SOM08_13965 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D SOM08_14235 tig; (GenBank) trigger factor K03545 tig; trigger factor
D SOM08_04350 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D SOM08_16450 ureE; (GenBank) urease accessory protein UreE K03187 ureE; urease accessory protein
D SOM08_16455 urease accessory UreF family protein K03188 ureF; urease accessory protein
D SOM08_16460 ureG; (GenBank) urease accessory protein UreG K03189 ureG; urease accessory protein
D SOM08_16340 urease accessory protein UreD K03190 ureD; urease accessory protein
D SOM08_16435 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D SOM08_11995 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SOM08_00905 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D SOM08_15650 proteasome-type protease K07395 K07395; putative proteasome-type protease
D SOM08_04205 OsmC family protein K07397 yhfA; putative redox protein
D SOM08_04335 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D SOM08_07850 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D SOM08_16275 xdhC; (GenBank) xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D SOM08_05035 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SOM08_08865 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SOM08_10335 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D SOM08_19750 YraN family protein K07460 yraN; putative endonuclease
D SOM08_21860 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D SOM08_07475 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D SOM08_12045 helicase RepA family protein K07505 repA; regulatory protein RepA
D SOM08_10060 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D SOM08_12090 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family
D SOM08_15095 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family
D SOM08_15120 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family
D SOM08_15140 IS6-like element IS26 family transposase K18320 IS15; transposase, IS6 family
D SOM08_04420 transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D SOM08_09890 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SOM08_06595 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D SOM08_20265 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D SOM08_14500 septation protein A K06190 ispZ; intracellular septation protein
D SOM08_18985 ytfE; (GenBank) iron-sulfur cluster repair protein YtfE K07322 ytfE; regulator of cell morphogenesis and NO signaling
C 99993 Cell motility
D SOM08_20005 lpoB; (GenBank) penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D SOM08_19540 ProQ/FINO family protein K03607 proQ; ProP effector
D SOM08_11350 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D SOM08_19860 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator
D SOM08_00365 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D SOM08_02580 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D SOM08_10525 PhoH family protein K07175 phoH2; PhoH-like ATPase
D SOM08_04185 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
D SOM08_05940 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D SOM08_07470 lolA; (GenBank) outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D SOM08_16595 lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB
D SOM08_04450 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D SOM08_13140 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D SOM08_10055 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D SOM08_19285 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D SOM08_03065 AsmA family protein K07289 asmA; AsmA protein
D SOM08_05075 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D SOM08_08560 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D SOM08_11150 efflux RND transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D SOM08_09410 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D SOM08_13405 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D SOM08_09815 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D SOM08_22290 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D SOM08_17305 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D SOM08_01710 apaG; (GenBank) Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D SOM08_04365 cyaY; (GenBank) iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D SOM08_12740 substrate-binding domain-containing protein K07219 K07219; putative molybdopterin biosynthesis protein
D SOM08_05690 ChuX/HutX family heme-like substrate-binding protein K07225 hmuS; putative hemin transport protein
D SOM08_19395 imelysin family protein K07231 K07231; putative iron-regulated protein
D SOM08_06625 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SOM08_05985 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D SOM08_14620 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D SOM08_05020 group II truncated hemoglobin K06886 glbN; hemoglobin
D SOM08_21365 group III truncated hemoglobin K06886 glbN; hemoglobin
D SOM08_10190 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D SOM08_18060 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D SOM08_19800 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D SOM08_21685 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D SOM08_02515 erpA; (GenBank) iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D SOM08_19775 metal-dependent hydrolase K07038 K07038; inner membrane protein
D SOM08_08355 YihY family inner membrane protein K07058 K07058; membrane protein
D SOM08_13935 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D SOM08_03275 phosphoribosyltransferase family protein K07100 K07100; putative phosphoribosyl transferase
D SOM08_14675 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D SOM08_01005 VOC family protein K04750 phnB; PhnB protein
D SOM08_17040 VOC family protein K04750 phnB; PhnB protein
D SOM08_10080 heme-binding protein K11477 glcG; glc operon protein GlcG
D SOM08_01835 LemA family protein K03744 lemA; LemA protein
D SOM08_20945 LemA family protein K03744 lemA; LemA protein
D SOM08_21580 SlyX family protein K03745 slyX; SlyX protein
D SOM08_21505 CreA family protein K05805 creA; CreA protein
D SOM08_05980 SPOR domain-containing protein K03749 dedD; DedD protein
D SOM08_07340 DedA family protein K03975 dedA; membrane-associated protein
D SOM08_07535 phage holin family protein K08972 K08972; putative membrane protein
D SOM08_22130 phage holin family protein K08972 K08972; putative membrane protein
D SOM08_21385 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D SOM08_13955 DUF4142 domain-containing protein K08995 K08995; putative membrane protein
D SOM08_02250 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D SOM08_02530 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D SOM08_14735 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D SOM08_20950 TPM domain-containing protein K06872 K06872; uncharacterized protein
D SOM08_07330 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D SOM08_04625 ATP-binding protein K06923 K06923; uncharacterized protein
D SOM08_11065 CoA-binding protein K06929 K06929; uncharacterized protein
D SOM08_12150 PPC domain-containing DNA-binding protein K06934 K06934; uncharacterized protein
D SOM08_02335 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D SOM08_22115 DUF3717 domain-containing protein K06938 K06938; uncharacterized protein
D SOM08_00630 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D SOM08_15890 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D SOM08_04990 PP0621 family protein K06950 K06950; uncharacterized protein
D SOM08_19850 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D SOM08_19815 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D SOM08_14850 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D SOM08_00285 VOC family protein K06991 K06991; uncharacterized protein
D SOM08_05570 VOC family protein K06996 K06996; uncharacterized protein
D SOM08_04885 YqiA/YcfP family alpha/beta fold hydrolase K07000 K07000; uncharacterized protein
D SOM08_02225 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D SOM08_21230 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D SOM08_20935 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D SOM08_03280 hypothetical protein K07028 K07028; uncharacterized protein
D SOM08_03315 AAA family ATPase K07028 K07028; uncharacterized protein
D SOM08_00340 VOC family protein K07032 K07032; uncharacterized protein
D SOM08_18030 VOC family protein K07032 K07032; uncharacterized protein
D SOM08_01660 UPF0149 family protein K07039 K07039; uncharacterized protein
D SOM08_09995 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D SOM08_05065 amidohydrolase family protein K07045 K07045; uncharacterized protein
D SOM08_10885 amidohydrolase family protein K07045 K07045; uncharacterized protein
D SOM08_17985 amidohydrolase family protein K07045 K07045; uncharacterized protein
D SOM08_05710 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D SOM08_12635 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D SOM08_14215 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D SOM08_20515 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein
D SOM08_01110 TSUP family transporter K07090 K07090; uncharacterized protein
D SOM08_10640 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SOM08_12330 TSUP family transporter K07090 K07090; uncharacterized protein
D SOM08_15065 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SOM08_16990 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SOM08_20140 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SOM08_20285 TSUP family transporter K07090 K07090; uncharacterized protein
D SOM08_06860 PhoX family phosphatase K07093 K07093; uncharacterized protein
D SOM08_13470 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D SOM08_12770 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D SOM08_12775 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D SOM08_14070 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D SOM08_22220 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D SOM08_00720 NAD(P)-dependent oxidoreductase K07118 K07118; uncharacterized protein
D SOM08_19585 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D SOM08_17765 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D SOM08_17225 MOSC N-terminal beta barrel domain-containing protein K07140 K07140; MOSC domain-containing protein
D SOM08_16105 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D SOM08_07860 VWA domain-containing protein K07161 K07161; uncharacterized protein
D SOM08_22450 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D SOM08_16470 DsrE family protein K09004 K09004; uncharacterized protein
D SOM08_13880 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D SOM08_15735 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D SOM08_15565 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D SOM08_11435 DUF167 domain-containing protein K09131 K09131; uncharacterized protein
D SOM08_21015 DUF493 family protein K09158 K09158; uncharacterized protein
D SOM08_07855 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D SOM08_12275 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D SOM08_19845 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D SOM08_14475 YciI family protein K09780 K09780; uncharacterized protein
D SOM08_11605 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D SOM08_21800 YbaN family protein K09790 K09790; uncharacterized protein
D SOM08_13845 Trm112 family protein K09791 K09791; uncharacterized protein
D SOM08_12925 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D SOM08_16780 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D SOM08_12005 RnfH family protein K09801 K09801; uncharacterized protein
D SOM08_20015 hypothetical protein K09859 K09859; uncharacterized protein
D SOM08_16835 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D SOM08_04635 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D SOM08_12395 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D SOM08_17730 DUF484 family protein K09921 K09921; uncharacterized protein
D SOM08_07000 crosslink repair DNA glycosylase YcaQ family protein K09927 K09927; uncharacterized protein
D SOM08_08275 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D SOM08_16675 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D SOM08_13455 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D SOM08_10155 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D SOM08_15680 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D SOM08_02565 YegP family protein K09946 K09946; uncharacterized protein
D SOM08_19410 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D SOM08_11100 ACT domain-containing protein K09964 K09964; uncharacterized protein
D SOM08_17760 DUF2239 family protein K09965 K09965; uncharacterized protein
D SOM08_11270 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D SOM08_08135 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D SOM08_17020 VWA domain-containing protein K09989 K09989; uncharacterized protein
D SOM08_13240 2OG-Fe(II) oxygenase K09990 K09990; uncharacterized protein
D SOM08_13255 2OG-Fe(II) oxygenase K09990 K09990; uncharacterized protein
D SOM08_19405 imelysin family protein K07338 K07338; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025