+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Hymenobacter psoromatis
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ACRISPR-Cas system
B Universal Cas proteins
C A0257_03450 subtype I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
C A0257_03445 CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D A0257_03470 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D A0257_03455 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-B factors
D A0257_03455 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D A0257_03455 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-D factors
D A0257_03455 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D A0257_03455 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C A0257_22210 hypothetical protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C A0257_22205 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C A0257_22200 type I restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
D A0257_21060 hypothetical protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D A0257_21935 hypothetical protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
C DNA methyltransferases
D A0257_08045 adenine methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D A0257_04945 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D A0257_03130 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D A0257_14570 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
C A0257_11710 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
C A0257_11705 type III restriction endonuclease subunit M K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
C A0257_03950 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
C A0257_13215 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
C A0257_13220 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D A0257_10375 transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D A0257_06060 PemK family transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D A0257_10380 hypothetical protein K07172 mazE; antitoxin MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D A0257_08665 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
C YafQ-dinJ
C YoeB-YefM
D A0257_07895 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D A0257_09615 hypothetical protein K19159 yefM; antitoxin YefM
C HipA-HipB
D A0257_13090 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D A0257_22420 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
D A0257_00650 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
C Doc-Phd
C HigB-HigA
D A0257_00210 addiction module toxin RelE K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D A0257_04845 addiction module toxin RelE K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D A0257_07425 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D A0257_01135 addiction module toxin RelE K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D A0257_04190 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D A0257_22940 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D A0257_04850 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D A0257_07430 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D A0257_01140 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D A0257_22935 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
C MqsR-MqsA
C VapC-VapB
D A0257_00195 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D A0257_00235 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D A0257_07905 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D A0257_07920 DNA-binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D A0257_13620 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D A0257_09240 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D A0257_17295 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D A0257_02745 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D A0257_02735 DNA topoisomerase IV K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D A0257_14380 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C A0257_14960 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C A0257_06205 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C A0257_15570 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C A0257_14910 sulfurtransferase K19170 dndC; DNA sulfur modification protein DndC
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023