+D GENES KO
#
KEGG Orthology (KO) - Intestinimonas butyriciproducens
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ibu00010]
D IB211_02287c Hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D IB211_03151 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IB211_00552c Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IB211_01813c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IB211_01812 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IB211_01362c Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D IB211_01811c Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IB211_02698c Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IB211_00380c D-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IB211_02699c Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IB211_02696c 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D IB211_02695c Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IB211_00842 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IB211_03246c Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_00316c Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D IB211_00315c Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D IB211_00318c Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D IB211_00317c Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D IB211_00332c Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02295c Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IB211_02913 Phosphoglucosamine mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:ibu00020]
D IB211_02690 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D IB211_00354c Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D IB211_01189c Putative enzyme K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D IB211_00690c Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_03177c Fumarate hydratase class I, aerobic K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D IB211_03176c Fumarate hydratase class I, aerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D IB211_00697c Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IB211_00758 Pyruvate carboxyl transferase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IB211_00316c Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D IB211_00315c Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D IB211_00318c Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D IB211_00317c Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D IB211_00332c Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ibu00030]
D IB211_00552c Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IB211_00664 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IB211_00796c Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_00797c Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_03325c Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_03326c Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_03327c Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IB211_02941 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IB211_01750c Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D IB211_02409 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D IB211_00459 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D IB211_02913 Phosphoglucosamine mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IB211_03334 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D IB211_00766c 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D IB211_00312 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D IB211_00764c 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D IB211_00765c 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D IB211_03322c 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D IB211_00313 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D IB211_01811c Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IB211_01362c Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D IB211_01813c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IB211_01812 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:ibu00040]
D IB211_00772c Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D IB211_00301 Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D IB211_00297 Altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D IB211_00298 Altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D IB211_00771c Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D IB211_00310 Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D IB211_00309 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D IB211_00636 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IB211_00664 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IB211_02691 Ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:ibu00051]
D IB211_02419 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IB211_02898c Mannose-1-phosphate guanylyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D IB211_02691 Ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D IB211_02287c Hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D IB211_01813c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IB211_01812 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IB211_01362c Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D IB211_01811c Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IB211_02698c Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IB211_03327c Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IB211_02941 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ibu00052]
D IB211_02295c Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D IB211_02296c Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IB211_01366 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IB211_02395c UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_01365 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_02079c UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_00636 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IB211_02913 Phosphoglucosamine mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IB211_02287c Hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D IB211_03151 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IB211_00774c Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D IB211_02618 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IB211_02077c UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IB211_01813c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IB211_01812 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IB211_03153 Tagatose-6-phosphate kinase AgaZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D IB211_01133 Gluconate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D IB211_03129c putative MR-MLE-family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
C 00053 Ascorbate and aldarate metabolism
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:ibu00500]
D IB211_00636 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IB211_00778c Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D IB211_02081c Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D IB211_02929c Glycogen biosynthesis protein GlgD, glucose-1-phosphate adenylyltransferase family K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D IB211_02930c Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D IB211_02928c Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D IB211_02931c 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D IB211_02926c Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D IB211_01389c 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D IB211_02913 Phosphoglucosamine mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IB211_02287c Hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D IB211_03151 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IB211_00552c Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IB211_02419 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ibu00520]
D IB211_02683 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D IB211_03149c N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D IB211_03270 Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D IB211_02301c Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D IB211_02287c Hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D IB211_02419 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D IB211_01714c Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IB211_03152 Glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IB211_01665c Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D IB211_03333 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D IB211_01857c N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D IB211_01856c Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D IB211_01032 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IB211_02909 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IB211_01429 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IB211_03266 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D IB211_03269 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D IB211_02033c UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D IB211_03151 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IB211_02913 Phosphoglucosamine mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IB211_00636 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IB211_02296c Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IB211_01366 Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D IB211_02395c UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_01365 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_02079c UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_02618 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IB211_02077c UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IB211_00552c Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IB211_02898c Mannose-1-phosphate guanylyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D IB211_02081c Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D IB211_02080c CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D IB211_02929c Glycogen biosynthesis protein GlgD, glucose-1-phosphate adenylyltransferase family K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D IB211_02930c Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ibu00620]
D IB211_00316c Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D IB211_00315c Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D IB211_00318c Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D IB211_00317c Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D IB211_00332c Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_02638c Acetaldehyde dehydrogenase, ethanolamine utilization cluster K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D IB211_01052c Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IB211_00212 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IB211_02001c Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D IB211_02635c Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D IB211_00842 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IB211_02325c Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D IB211_02328c Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D IB211_02327c Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D IB211_02326c Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02540 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D IB211_00155c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D IB211_01396c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D IB211_02524 (S)-2-hydroxy-acid oxidase chain D K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D IB211_00829c Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D IB211_00161c hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D IB211_02523 putative D-mannonate dehydrogenase K22373 larA; lactate racemase [EC:5.1.2.1]
D IB211_00696c DP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D IB211_00595c Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IB211_00758 Pyruvate carboxyl transferase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IB211_03177c Fumarate hydratase class I, aerobic K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D IB211_03176c Fumarate hydratase class I, aerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D IB211_00697c Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IB211_03246c Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_01865c 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ibu00630]
D IB211_02690 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D IB211_00354c Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D IB211_01189c Putative enzyme K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_02541 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D IB211_00153c 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D IB211_01395c 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D IB211_00613 hypothetical protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D IB211_02984c Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D IB211_00599c Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D IB211_00593c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_00594c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_01792c Catalase K03781 katE; catalase [EC:1.11.1.6]
D IB211_01644c Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D IB211_02652c Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D IB211_01422 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IB211_02022c Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IB211_01146 Glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D IB211_01147 Glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D IB211_01143 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_01145 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D IB211_00766c 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D IB211_00312 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D IB211_03323c Dihydrodipicolinate synthase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16]
C 00640 Propanoate metabolism [PATH:ibu00640]
D IB211_02540 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D IB211_00155c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D IB211_01396c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D IB211_01052c Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IB211_00212 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IB211_02001c Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D IB211_02635c Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_00316c Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D IB211_00315c Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D IB211_00318c Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D IB211_00317c Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D IB211_01884c Butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D IB211_02325c Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D IB211_02328c Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D IB211_02327c Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D IB211_02326c Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D IB211_02984c Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D IB211_00599c Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D IB211_00593c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_00594c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_03377 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D IB211_02008c Propanediol dehydratase large subunit K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D IB211_02007c Propanediol dehydratase medium subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D IB211_02006c Propanediol dehydratase small subunit K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D IB211_01996c CoA-acylating propionaldehyde dehydrogenase K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:ibu00650]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00592c 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_00617 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_03207 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_02505 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_02980 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_02504 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D IB211_00911 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D IB211_01397c Enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D IB211_00591 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D IB211_00610 Enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D IB211_00612 Enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D IB211_01468c 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D IB211_01884c Butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D IB211_02422c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03339 Butyrate-acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02976 Butyrate-acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03132c Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03340 Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02977 Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03131c Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02421c Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03315 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D IB211_02638c Acetaldehyde dehydrogenase, ethanolamine utilization cluster K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D IB211_02541 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D IB211_00153c 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D IB211_01395c 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D IB211_00613 hypothetical protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D IB211_00595c Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IB211_00597c hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D IB211_00285 4-hydroxybutyrate:acetyl-CoA CoA transferase K18122 cat2; 4-hydroxybutyrate CoA-transferase [EC:2.8.3.-]
D IB211_01887c 4-hydroxyphenylacetate 3-monooxygenase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D IB211_00283 4-hydroxybutanoyl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D IB211_00316c Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D IB211_00315c Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D IB211_00318c Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D IB211_00317c Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D IB211_00332c Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D IB211_00548 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D IB211_00681c Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IB211_00680c Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ibu00660]
D IB211_00681c Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IB211_00680c Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IB211_01639 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D IB211_01640 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D IB211_01641 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D IB211_02698c Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ibu00190]
D IB211_03055 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D IB211_03056 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D IB211_03053 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D IB211_03057 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D IB211_03052 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D IB211_03054 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D IB211_03049 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D IB211_03050 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D IB211_03051 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D IB211_02617 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D IB211_02164 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ibu00710]
D IB211_02699c Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IB211_00380c D-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IB211_01811c Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IB211_01362c Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D IB211_00796c Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_00797c Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_03325c Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_03326c Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_03327c Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IB211_02941 Ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D IB211_02698c Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D IB211_00664 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D IB211_03246c Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:ibu00720]
D IB211_00316c Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D IB211_00315c Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D IB211_00318c Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D IB211_00317c Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D IB211_00332c Pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D IB211_03246c Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D IB211_00758 Pyruvate carboxyl transferase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D IB211_03177c Fumarate hydratase class I, aerobic K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D IB211_03176c Fumarate hydratase class I, aerobic K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D IB211_00697c Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D IB211_01887c 4-hydroxyphenylacetate 3-monooxygenase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D IB211_00283 4-hydroxybutanoyl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00690c Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D IB211_01189c Putative enzyme K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D IB211_02325c Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D IB211_02328c Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D IB211_02327c Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D IB211_02326c Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D IB211_02984c Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D IB211_00599c Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D IB211_00593c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_00594c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_02286c Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D IB211_01493 Methylenetetrahydrofolate dehydrogenase (DP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IB211_00200 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D IB211_00212 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IB211_02001c Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D IB211_02635c Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D IB211_01052c Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:ibu00680]
D IB211_02022c Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IB211_02695c Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IB211_01811c Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D IB211_01362c Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D IB211_01813c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IB211_01812 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D IB211_01052c Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D IB211_00212 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IB211_00316c Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D IB211_00315c Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D IB211_00318c Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D IB211_00317c Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D IB211_02696c 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D IB211_00383c D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IB211_00384c Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IB211_00938 Homoserine kinase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:ibu00910]
D IB211_01374c Nitrogenase subunit NifH like, type 1 K02588 nifH; nitrogenase iron protein NifH
D IB211_02404c Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D IB211_01253 Hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D IB211_01051c DP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D IB211_01422 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IB211_01426 Glutamate synthase large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IB211_00769c Glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IB211_03310 Glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IB211_01427 Glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IB211_03344c Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D IB211_02860c Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:ibu00920]
D IB211_00579 3'-to-5' oligoribonuclease A K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D IB211_02180c Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IB211_00814c Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IB211_03346 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IB211_00650c Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D IB211_00282 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ibu00061]
D IB211_02325c Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D IB211_02328c Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D IB211_02327c Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D IB211_02326c Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D IB211_02329c Acyl carrier protein K02078 acpP; acyl carrier protein
D IB211_02196c Acyl carrier protein K02078 acpP; acyl carrier protein
D IB211_02322c Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IB211_02324c 3-oxoacyl synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IB211_02320c 3-oxoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IB211_02321c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_02389 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_00276c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_01449c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_02319c (3R)-hydroxymyristoyl dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D IB211_02323c Enoyl reductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D IB211_00907c Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ibu00071]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00615 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02420c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02970c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_01884c Butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D IB211_00908c Butyryl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D IB211_00907c Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ibu00561]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02376 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D IB211_02197c Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D IB211_01573 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D IB211_01607 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IB211_02708 Transcription regulator K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D IB211_01476c Hydrolase of alpha/beta superfamily, possible membrane associated lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D IB211_00878c 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:ibu00564]
D IB211_01574 Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D IB211_02373 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D IB211_01573 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D IB211_01607 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D IB211_02708 Transcription regulator K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D IB211_02362c Ethanolamine utilization protein EutA K04019 eutA; ethanolamine utilization protein EutA
D IB211_02642c Ethanolamine utilization protein EutA K04019 eutA; ethanolamine utilization protein EutA
D IB211_02356c Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D IB211_02361c Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D IB211_02641c Ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D IB211_02355c Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D IB211_02360c Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D IB211_02640c Ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D IB211_01545 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D IB211_02264c CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D IB211_01434 Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D IB211_00932c phospholipase D domain protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:ibu00600]
D IB211_00774c Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D IB211_03259c Sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ibu00592]
D IB211_00615 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02420c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02970c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
D IB211_00656 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D IB211_00795c putative tesA-like protease K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ibu00230]
D IB211_02906c ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D IB211_02913 Phosphoglucosamine mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IB211_03334 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D IB211_02116 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IB211_01421 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IB211_02122 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D IB211_02118 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D IB211_00269 Phosphoribosylformylglycinamidine synthase, synthetase subunit K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D IB211_02117 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D IB211_02114 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D IB211_02115 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D IB211_01814c Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D IB211_02120 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IB211_02119 hypothetical protein K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D IB211_01420 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IB211_02953c 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IB211_00401 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IB211_00267 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D IB211_03215 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D IB211_01981c Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IB211_02188c Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D IB211_03362c Xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D IB211_01066c Xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D IB211_03343c Xanthine dehydrogenase, molybdenum binding subunit K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D IB211_03342c Xanthine dehydrogenase, FAD binding subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D IB211_01817c glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IB211_01840c glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IB211_01622 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D IB211_02750 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IB211_02612c Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D IB211_01973c Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D IB211_00558c Nucleotidase YfbR, HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D IB211_00144 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D IB211_02163 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D IB211_01746 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D IB211_02952c 5'-nucleotidase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D IB211_02512 2',3'-cyclic-nucleotide 2'-phosphodiesterase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D IB211_00370 Phosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D IB211_03024c Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IB211_00404 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D IB211_03165c Allantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D IB211_03166c Allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D IB211_03344c Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D IB211_02860c Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:ibu00240]
D IB211_01841c Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IB211_01842c Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IB211_02551c Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D IB211_02316c Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D IB211_02312c Dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D IB211_02313c Dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D IB211_00538c Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D IB211_02315c Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D IB211_01542 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D IB211_00404 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D IB211_00220 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D IB211_02625c CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D IB211_01606 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D IB211_02668c Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D IB211_00159c Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D IB211_01420 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IB211_02953c 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IB211_02952c 5'-nucleotidase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D IB211_02512 2',3'-cyclic-nucleotide 2'-phosphodiesterase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D IB211_01809c Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D IB211_01788c Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D IB211_00370 Phosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D IB211_02660 Pseudouridine kinase K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D IB211_02661 Pseudouridine 5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D IB211_01313c Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D IB211_02612c Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D IB211_02750 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IB211_00558c Nucleotidase YfbR, HD superfamily K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D IB211_00364 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D IB211_00858 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D IB211_00219 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D IB211_02885 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D IB211_00564 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D IB211_03349 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ibu00250]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_00147 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D IB211_00669c L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D IB211_00933c Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D IB211_02675 glutamine-hydrolyzing asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D IB211_00184c Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D IB211_02072c Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IB211_02071c Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IB211_01746 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D IB211_01814c Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D IB211_02551c Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D IB211_01426 Glutamate synthase large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IB211_00769c Glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IB211_03310 Glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IB211_01427 Glutamate synthase small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D IB211_01051c DP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D IB211_01422 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IB211_01841c Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IB211_01842c Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IB211_01714c Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IB211_03152 Glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IB211_02116 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IB211_01421 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ibu00260]
D IB211_01198 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IB211_01679 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IB211_01197 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IB211_00938 Homoserine kinase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D IB211_01586 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D IB211_03347 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D IB211_01037c Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D IB211_02022c Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IB211_02696c 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D IB211_00383c D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IB211_00384c Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IB211_01146 Glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D IB211_01147 Glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D IB211_01143 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_01145 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D IB211_00830c L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IB211_00831c L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IB211_00663 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IB211_01775 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D IB211_01774 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ibu00270]
D IB211_02180c Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D IB211_00814c Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IB211_03346 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D IB211_02429c Cystathionine beta-lyase, Bsu PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_03068 Putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_02278c Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_00202 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D IB211_01316 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D IB211_02109c 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D IB211_02014c 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D IB211_00267 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D IB211_03171 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D IB211_00402 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D IB211_01783 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D IB211_00710 Modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_02471c D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_01211 D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_00959 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D IB211_01198 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IB211_01679 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IB211_01197 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IB211_00650c Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D IB211_00282 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D IB211_02589c O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D IB211_00198c O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D IB211_03209c Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_00830c L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IB211_00831c L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D IB211_00383c D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IB211_00384c Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ibu00280]
D IB211_03209c Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_01884c Butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D IB211_00908c Butyryl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D IB211_00615 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02420c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02970c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02984c Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D IB211_00599c Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D IB211_00593c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_00594c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_00548 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ibu00290]
D IB211_00663 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D IB211_01639 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D IB211_01640 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D IB211_01641 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D IB211_00681c Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IB211_00680c Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IB211_00679c Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D IB211_00676c Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IB211_01039 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IB211_03209c Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IB211_01865c 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ibu00300]
D IB211_01197 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D IB211_01198 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IB211_01679 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IB211_01680 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IB211_00456 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IB211_00457 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IB211_01682 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D IB211_02066c Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IB211_02155c Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IB211_02622 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IB211_01424 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D IB211_01425 L,L-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D IB211_02521 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IB211_00327c Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IB211_01028 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IB211_01784c UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ibu00310]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00980 Lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D IB211_00981 L-beta-lysine 5,6-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D IB211_00982 L-beta-lysine 5,6-aminomutase beta subunit K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D IB211_00979 3,5-diaminobexanoate dehydrogenase K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11]
D IB211_03192c 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D IB211_00977 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D IB211_00294 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D IB211_02981c 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D IB211_02342c 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D IB211_03205 3-keto-5-aminohexanoate cleavage enzyme K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D IB211_02425c hypothetical protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D IB211_00976 3-aminobutyryl-CoA ammonia-lyase K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14]
D IB211_02422c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03339 Butyrate-acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02976 Butyrate-acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03132c Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03340 Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02977 Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03131c Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02421c Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ibu00220]
D IB211_02065c Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D IB211_02072c Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IB211_02071c Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IB211_01422 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IB211_01841c Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D IB211_01842c Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D IB211_03344c Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D IB211_02860c Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D IB211_01051c DP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02069c Glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D IB211_02067c Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D IB211_02070c N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D IB211_02066c Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ibu00330]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_00430c spermine/spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D IB211_01671c Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D IB211_02702 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D IB211_02703 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_03323c Dihydrodipicolinate synthase K18123 HOGA1; 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.3.16]
C 00340 Histidine metabolism [PATH:ibu00340]
D IB211_01551 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D IB211_01550 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D IB211_01558 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D IB211_01555 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D IB211_01554 Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D IB211_01556 Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D IB211_01553 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D IB211_01501 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IB211_02940 Histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D IB211_01552 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:ibu00350]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_01501 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IB211_03182c Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
C 00360 Phenylalanine metabolism [PATH:ibu00360]
D IB211_03063 hypothetical protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D IB211_00592c 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_00617 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_03207 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_02505 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_02980 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_01501 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IB211_01479c Acetyltransferase, GT family K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D IB211_00125 2,4-dienoyl-CoA reductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism [PATH:ibu00380]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_01792c Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ibu00400]
D IB211_02602 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IB211_03072 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D IB211_03073 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D IB211_03078 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D IB211_00130c Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D IB211_03077 Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D IB211_03074 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D IB211_03075 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D IB211_01769 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IB211_01770 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D IB211_01771 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D IB211_01773 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D IB211_01772 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D IB211_01775 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D IB211_01774 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D IB211_03076 Chorismate mutase I K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D IB211_01196 ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase K06209 pheB; chorismate mutase [EC:5.4.99.5]
D IB211_02603 Arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_01501 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ibu00410]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_03349 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D IB211_01884c Butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ibu00430]
D IB211_01349 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IB211_00212 Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D IB211_02001c Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D IB211_02635c Ethanolamine utilization protein similar to PduL K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D IB211_01052c Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ibu00450]
D IB211_02429c Cystathionine beta-lyase, Bsu PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_03068 Putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_02278c Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_00202 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D IB211_00890 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D IB211_00101 Alkyl hydroperoxide reductase protein F K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D IB211_01046 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D IB211_01256c Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D IB211_02866c Glutamate synthase small chain K12527 ygfK; putative selenate reductase [EC:1.97.1.9]
D IB211_01727 Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D IB211_00190 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ibu00460]
D IB211_00778c Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D IB211_01349 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IB211_00669c L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D IB211_00933c Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D IB211_02022c Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ibu00470]
D IB211_00163c Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IB211_02059c Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IB211_01785c D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IB211_02757c Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D IB211_01659c UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IB211_00441c L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D IB211_00147 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D IB211_01424 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D IB211_02521 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IB211_00327c Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D IB211_00981 L-beta-lysine 5,6-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D IB211_00982 L-beta-lysine 5,6-aminomutase beta subunit K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
C 00480 Glutathione metabolism [PATH:ibu00480]
D IB211_01349 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IB211_02431c Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D IB211_00690c Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:ibu00515]
D IB211_02939 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:ibu00514]
D IB211_02939 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ibu00511]
D IB211_03259c Sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D IB211_00774c Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:ibu00542]
D IB211_02034c Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ibu00541]
D IB211_00636 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D IB211_02395c UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_01365 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_02079c UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D IB211_02618 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IB211_02077c UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D IB211_02078c dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D IB211_02081c Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D IB211_02080c CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D IB211_03333 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D IB211_02033c UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:ibu00550]
D IB211_01032 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IB211_02909 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IB211_01429 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IB211_00898 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D IB211_01659c UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IB211_01028 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IB211_01785c D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IB211_01784c UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D IB211_01544 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D IB211_02041c Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IB211_01029 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IB211_01031 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IB211_02093c Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D IB211_00223 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D IB211_01027 Cell division protein FtsI K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D IB211_02595 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_02933c D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_01602 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_01859 Beta-lactamase class C K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D IB211_01761 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D IB211_00151 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
C 00552 Teichoic acid biosynthesis [PATH:ibu00552]
D IB211_02041c Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IB211_02034c Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D IB211_00857 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D IB211_02185c hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D IB211_00813 Cell envelope-associated transcriptional attenuator LytRNA-CpsA-Psr, subfamily M K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D IB211_00878c 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ibu00543]
D IB211_02034c Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D IB211_00827c putative poly(beta-D-mannuronate) O-acetylase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D IB211_02665c putative poly(beta-D-mannuronate) O-acetylase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D IB211_00969c putative poly(beta-D-mannuronate) O-acetylase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D IB211_02180c Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ibu00730]
D IB211_00819c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_02919c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_00336 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D IB211_01691c 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D IB211_01631 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IB211_02207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D IB211_02281c Thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D IB211_03024c Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ibu00740]
D IB211_01378c hypothetical protein K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302]
D IB211_00581 Riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D IB211_03248c Oxygen-insensitive DPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D IB211_02906c ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:ibu00750]
D IB211_02499 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D IB211_00384c Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D IB211_01586 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D IB211_03347 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ibu00760]
D IB211_02446 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D IB211_00401 Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D IB211_01420 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IB211_02953c 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D IB211_02952c 5'-nucleotidase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D IB211_02512 2',3'-cyclic-nucleotide 2'-phosphodiesterase K08693 yfkN; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:3.1.4.16 3.1.3.6 3.1.3.5]
D IB211_02186c Hydrolase (HAD superfamily), YqeK K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D IB211_00404 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D IB211_02689 DNA synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D IB211_01061 D-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D IB211_01689c DNA kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:ibu00770]
D IB211_00681c Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D IB211_00680c Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D IB211_00679c Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D IB211_00676c Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IB211_01039 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D IB211_02341c 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D IB211_00521 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D IB211_01642 Pantothenate kinase type III, CoaX-like K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D IB211_02027c Pantothenate kinase type III, CoaX-like K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D IB211_01307 Pantothenate kinase type III, CoaX-like K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D IB211_01305c Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D IB211_00404 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D IB211_01022 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D IB211_01777c hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D IB211_00879c 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D IB211_03209c Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IB211_03349 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ibu00780]
D IB211_02320c 3-oxoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IB211_02321c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_02389 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_00276c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_01449c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_02319c (3R)-hydroxymyristoyl dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D IB211_00416c Biotin operon repressor / Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ibu00785]
D IB211_03005c Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_01146 Glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D IB211_01147 Glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D IB211_01143 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IB211_01145 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ibu00790]
D IB211_02207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D IB211_00565 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IB211_00044c Metal dependent hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D IB211_01721c Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D IB211_01722c Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D IB211_01720c Molybdenum cofactor biosynthesis protein MoaB K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D IB211_03350 CTP:molybdopterin cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:ibu00670]
D IB211_00565 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D IB211_02286c Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D IB211_01493 Methylenetetrahydrofolate dehydrogenase (DP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D IB211_02022c Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D IB211_02118 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D IB211_02120 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IB211_01626 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D IB211_01143 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D IB211_00202 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D IB211_00564 Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D IB211_00200 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D IB211_00860 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ibu00860]
D IB211_01157 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_02036 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_01526 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D IB211_01531 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D IB211_01530 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D IB211_01528 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D IB211_01529 Uroporphyrinogen-III methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D IB211_01527 Siroheme synthase / Precorrin-2 oxidase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D IB211_01520 Sirohydrochlorin cobaltochelatase CbiK K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D IB211_01525 Cobalt-precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D IB211_01506 Cobalt-precorrin-3b C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D IB211_01504 Cobalt-precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D IB211_01505 Cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D IB211_01507 Cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D IB211_01503 Cobalt-precorrin-6 synthase, anaerobic K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D IB211_01508 Cobalt-precorrin-6y C5-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D IB211_01519 Cobalt-precorrin-8x methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D IB211_01509 Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D IB211_03247c Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D IB211_01518 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D IB211_01516 Adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D IB211_01512 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D IB211_01514 hypothetical protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D IB211_01513 Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D IB211_01511 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D IB211_01515 putative phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D IB211_01517 L-threonine 3-O-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D IB211_02636c ATP:Cob(I)alamin adenosyltransferase K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D IB211_03064 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ibu00900]
D IB211_01691c 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D IB211_01546 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D IB211_01610 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D IB211_00940 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D IB211_01611 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D IB211_01548 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_01693c Octaprenyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D IB211_01544 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:ibu00903]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02089 6-hexanolactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:ibu00907]
D IB211_00548 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D IB211_00615 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02420c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02970c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D IB211_00796c Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_00797c Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_03325c Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D IB211_03326c Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D IB211_02078c dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures [PATH:ibu01054]
D IB211_00147 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ibu00946]
D IB211_00778c Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D IB211_00325c Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D IB211_00434c Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:ibu00332]
D IB211_02702 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D IB211_02703 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ibu00261]
D IB211_01198 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D IB211_01679 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D IB211_01680 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IB211_00456 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IB211_00457 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D IB211_01682 Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ibu00521]
D IB211_02287c Hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D IB211_03151 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D IB211_02913 Phosphoglucosamine mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D IB211_02078c dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis [PATH:ibu00524]
D IB211_02287c Hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D IB211_03151 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:ibu00401]
D IB211_02603 Arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_01501 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D IB211_01769 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IB211_01770 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D IB211_02322c Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IB211_02321c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_02389 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_00276c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_01449c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D IB211_02329c Acyl carrier protein K02078 acpP; acyl carrier protein
D IB211_02196c Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ibu00999]
D IB211_01316 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D IB211_00778c Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ibu00362]
D IB211_00615 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02420c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02970c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02351 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D IB211_01405c 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D IB211_02732c 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D IB211_00595c Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IB211_00597c hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D IB211_00592c 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_00617 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_03207 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_02505 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_02980 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D IB211_02422c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03339 Butyrate-acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02976 Butyrate-acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03132c Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03340 Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02977 Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03131c Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02421c Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ibu00625]
D IB211_02884 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_02280 Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D IB211_01374c Nitrogenase subunit NifH like, type 1 K02588 nifH; nitrogenase iron protein NifH
D IB211_00256c 5'-nucleotidase YjjG K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D IB211_00256c 5'-nucleotidase YjjG K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
D IB211_02351 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
D IB211_00316c Pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D IB211_00315c Pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D IB211_00318c Pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D IB211_00317c Pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
D IB211_00615 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02420c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D IB211_02970c 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
D IB211_02540 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D IB211_00155c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D IB211_01396c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D IB211_02089 6-hexanolactone hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D IB211_02351 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ibu03020]
D IB211_02249c D-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IB211_02248c D-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IB211_03016c D-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IB211_01623 D-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ibu03010]
D IB211_01498c SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D IB211_01540 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D IB211_03039c SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D IB211_03017c SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D IB211_03028c SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D IB211_02879c SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D IB211_02220c SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D IB211_03031c SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D IB211_00785c SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D IB211_03046c SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D IB211_03018c SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D IB211_02221c SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D IB211_03019c SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D IB211_03032c SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D IB211_00229c SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D IB211_01485c SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D IB211_03036c SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D IB211_02877c SSU ribosomal protein S18p or SSU ribosomal protein S18p, zinc-dependent K02963 RP-S18; small subunit ribosomal protein S18
D IB211_03041c SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D IB211_00017 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D IB211_01175 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D IB211_02105 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D IB211_03042c LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D IB211_03045c LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D IB211_03044c LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D IB211_03033c LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D IB211_03030c LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D IB211_02108 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D IB211_03212 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D IB211_02107 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D IB211_02104 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D IB211_00786c LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D IB211_03035c LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D IB211_03026c LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D IB211_03038c LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D IB211_03015c LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D IB211_03029c LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D IB211_01577 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D IB211_00926c LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D IB211_03238c LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D IB211_03040c LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D IB211_03043c LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D IB211_03034c LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D IB211_03236c LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D IB211_01716 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D IB211_03037c LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D IB211_03027c LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D IB211_01978c LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D IB211_01570 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D IB211_02101 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D IB211_03389c LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D IB211_00927c LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D IB211_03020c LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D IB211_02222c Firmicutes ribosomal L7Ae family protein K07590 RP-L7A; large subunit ribosomal protein L7A
D IB211_rRNA00001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IB211_rRNA00004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IB211_rRNA00002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IB211_rRNA00006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IB211_rRNA00005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ibu00970]
D IB211_tRNA00026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00051 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00053 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00032 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IB211_tRNA00034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IB211_tRNA00047 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IB211_tRNA00019 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IB211_tRNA00044 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IB211_tRNA00016 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IB211_tRNA00030 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IB211_tRNA00023 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IB211_tRNA00040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IB211_tRNA00006 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IB211_tRNA00049 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IB211_tRNA00021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IB211_tRNA00017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IB211_tRNA00042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IB211_tRNA00033 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IB211_tRNA00031 tRNA-His K14226 tRNA-His; tRNA His
D IB211_tRNA00003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IB211_tRNA00052 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IB211_tRNA00008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IB211_tRNA00005 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IB211_tRNA00050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IB211_tRNA00048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IB211_tRNA00038 tRNA-Met K14230 tRNA-Met; tRNA Met
D IB211_tRNA00041 tRNA-Met K14230 tRNA-Met; tRNA Met
D IB211_tRNA00046 tRNA-Met K14230 tRNA-Met; tRNA Met
D IB211_tRNA00018 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IB211_tRNA00024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IB211_tRNA00022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IB211_tRNA00013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IB211_tRNA00015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IB211_tRNA00035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IB211_tRNA00043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IB211_tRNA00045 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D IB211_tRNA00036 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IB211_tRNA00002 tRNA-Val K14237 tRNA-Val; tRNA Val
D IB211_tRNA00020 tRNA-Val K14237 tRNA-Val; tRNA Val
D IB211_01157 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_02036 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_02581 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IB211_02583 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IB211_01418 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IB211_01419 Aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D IB211_01417 Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D IB211_01038c Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D IB211_00865 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IB211_03379 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IB211_01416 Aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D IB211_02654c Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D IB211_00014c Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IB211_02950c Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IB211_03371 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IB211_02179c Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IB211_00190 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IB211_01626 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D IB211_01161 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IB211_02258c Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IB211_00183 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IB211_02204c Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IB211_02755c Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IB211_00252c Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IB211_03378 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IB211_02062 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IB211_02063 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IB211_01685c Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IB211_02035c Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ibu03060]
D IB211_03025c Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D IB211_02102 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IB211_02681 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IB211_01673c Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IB211_03386c Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IB211_00266 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IB211_01486c Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IB211_02191c Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IB211_00375 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IB211_00235c Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D IB211_03126 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ibu04122]
D IB211_00819c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_02919c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_00127c tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D IB211_01721c Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D IB211_01722c Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D IB211_01720c Molybdenum cofactor biosynthesis protein MoaB K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D IB211_00336 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ibu03018]
D IB211_02695c Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IB211_00228c Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D IB211_00129c ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D IB211_02682 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D IB211_00238 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IB211_00365 Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D IB211_02897c Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D IB211_01813c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IB211_02937 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D IB211_02710 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IB211_00177 R-binding protein Hfq K03666 hfq; host factor-I protein
D IB211_02164 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ibu03030]
D IB211_01433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IB211_01549 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D IB211_01767c DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IB211_03383c DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IB211_00871 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IB211_00003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_01956c DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_03213 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D IB211_01972c DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D IB211_01938c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02878c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02759 Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_00010 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D IB211_01583 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D IB211_02174c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IB211_01653c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IB211_00109c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ibu03410]
D IB211_02530c 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D IB211_02023 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D IB211_01741c Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D IB211_02883 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D IB211_00944c D-3-methyladenine glycosylase II K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D IB211_01415c Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D IB211_00880 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D IB211_01179 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D IB211_02174c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IB211_00143 Single-stranded-D-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D IB211_01653c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IB211_00109c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ibu03420]
D IB211_03337 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D IB211_00531c Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D IB211_00536c Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D IB211_01019 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D IB211_00942 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IB211_02174c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IB211_01653c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IB211_00109c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ibu03430]
D IB211_00172 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D IB211_01012 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D IB211_00975 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D IB211_00174 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D IB211_00942 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IB211_01695c Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D IB211_01694c Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D IB211_00143 Single-stranded-D-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D IB211_01938c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02878c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02759 Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_01433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IB211_01549 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D IB211_00003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_01956c DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_01767c DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IB211_00871 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IB211_03383c DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IB211_01653c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IB211_00109c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ibu03440]
D IB211_00143 Single-stranded-D-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D IB211_01938c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02878c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02759 Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_00005 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D IB211_01010 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D IB211_00665 Recombination protein RecR K06187 recR; recombination protein RecR
D IB211_02268c RecA protein K03553 recA; recombination protein RecA
D IB211_02174c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IB211_01667c Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D IB211_01666c Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D IB211_01668c Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D IB211_00873 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IB211_02477 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IB211_00119c RecD-like DNA helicase YrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D IB211_00528c RecD-like DNA helicase YrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D IB211_01433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IB211_01549 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D IB211_00003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_01956c DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_01767c DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IB211_00871 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IB211_03383c DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IB211_01624 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ibu02010]
D IB211_01719c Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D IB211_01718c Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D IB211_01717c Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D IB211_01562c ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IB211_00952c Spermidine Putrescine ABC transporter permease component potD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IB211_01563c Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D IB211_00953c Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D IB211_01564c Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D IB211_00954c Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D IB211_01565c Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D IB211_00955c Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D IB211_01156 Sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IB211_02300c Multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IB211_02398 Sugar ABC transporter sugar-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D IB211_02400 N-Acetyl-D-glucosamine ABC transport system, permease protein K10201 ngcF; N-acetylglucosamine transport system permease protein
D IB211_02401 ABC-type sugar transport system, permease component K10202 ngcG; N-acetylglucosamine transport system permease protein
D IB211_03361c hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D IB211_01749c bmp family protein K07335 bmpA; basic membrane protein A and related proteins
D IB211_02303c ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D IB211_03359c hypothetical protein K23535 nupB; general nucleoside transport system permease protein
D IB211_03358c Putative deoxyribose-specific ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D IB211_02302c Unspecified monosaccharide ABC transport system, permease component 2 K23536 nupC; general nucleoside transport system permease protein
D IB211_03360c Putative deoxyribose-specific ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IB211_02304c Sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IB211_02290c Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D IB211_02291c Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D IB211_02288c Galactose/methyl galactoside ABC transport system, permease protein MglC K10541 mglC; methyl-galactoside transport system permease protein
D IB211_02289c Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D IB211_02651c Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IB211_02650c Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D IB211_02649c Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D IB211_02648c Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IB211_00307 L-Cystine ABC transporter, periplasmic cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein
D IB211_00308 Amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D IB211_00249 Amino acid ABC transporter, amino acid-binding/permease protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D IB211_00250 Amino acid ABC transporter, amino acid-binding/permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D IB211_00251 Amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D IB211_00302 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D IB211_03195 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IB211_00275c High-affinity leucine-specific transport system, periplasmic binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IB211_03196 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D IB211_00274c High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D IB211_03197 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D IB211_00273c Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D IB211_03198 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IB211_00272c Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IB211_03199 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IB211_00271c Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IB211_00815c Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D IB211_00816c Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D IB211_00817c Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D IB211_00248 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D IB211_00440c Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D IB211_00244 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D IB211_00439c Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D IB211_00245 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D IB211_00438c Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D IB211_00246 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D IB211_00437c Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D IB211_00247 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D IB211_00436c Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D IB211_00083c Nickel ABC transporter, periplasmic nickel-binding protein NikA K15584 nikA; nickel transport system substrate-binding protein
D IB211_00082c Nickel transport system permease protein NikB K15585 nikB; nickel transport system permease protein
D IB211_00081c Nickel transport system permease protein NikC K15586 nikC; nickel transport system permease protein
D IB211_00080c Nickel transport ATP-binding protein NikD K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D IB211_00079c Nickel transport ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D IB211_01187c Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D IB211_01236 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D IB211_01185c ABC transporter 3 K09816 znuB; zinc transport system permease protein
D IB211_01238 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D IB211_01186c ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D IB211_01237 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D IB211_01522 Additional substrate-specific component CbiN of cobalt ECF transporter K02009 cbiN; cobalt/nickel transport protein
D IB211_01521 Substrate-specific component CbiM of cobalt ECF transporter K02007 cbiM; cobalt/nickel transport system permease protein
D IB211_01523 Transmembrane component CbiQ of energizing module of cobalt ECF transporter K02008 cbiQ; cobalt/nickel transport system permease protein
D IB211_01524 ATPase component CbiO of energizing module of cobalt ECF transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D IB211_00417 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D IB211_01272 Transmembrane component of energizing module of predicted ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D IB211_00805 Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D IB211_02048 Transmembrane component of ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D IB211_01279 Transmembrane component of energizing module of predicted ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D IB211_02045 ATPase component of ECF transporter K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IB211_02047 ATPase component of ECF transporter K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IB211_02087c O-antigen export system permease protein RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D IB211_02086c Teichoic acid export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D IB211_02211c Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IB211_02212c Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IB211_03329c hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D IB211_03330c ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D IB211_00089c ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D IB211_01274 Transport ATP-binding protein CydD K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D IB211_01908 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D IB211_02463c hypothetical protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D IB211_00088c Lipid A export ATP-binding/permease protein MsbA K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D IB211_01275 Transport ATP-binding protein CydC K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D IB211_01909 Lipid A export ATP-binding/permease protein MsbA K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D IB211_02462c ABC transporter ATP-binding/transmembrane protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D IB211_00023 Lipid A export ATP-binding/permease protein MsbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D IB211_00024 Multidrug resistance ABC transporter ATP-binding and permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D IB211_02037c ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:ibu02060]
D IB211_00559c hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D IB211_01013 Catabolite repression HPr-like protein Crh K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:ibu03070]
D IB211_02102 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IB211_02681 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IB211_03025c Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D IB211_01673c Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IB211_03386c Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IB211_00266 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IB211_02191c Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IB211_01486c Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IB211_03274 TrsK-like protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_00060 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_01110c hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_02764 TrsK-like protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_02829c TrsK-like protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_01226 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ibu02020]
D IB211_02645c Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IB211_02646c Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D IB211_02207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D IB211_02651c Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IB211_00208 Serine protease, DegP/HtrA, do-like K04771 degP; serine protease Do [EC:3.4.21.107]
D IB211_00411 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D IB211_00445c Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IB211_00444c D-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IB211_02343c Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D IB211_02967 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D IB211_02973 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D IB211_02966 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D IB211_02972 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D IB211_02344c hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D IB211_02965 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D IB211_00408 Two-component response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D IB211_02903c Phosphate regulon sensor protein PhoR (SphS) K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D IB211_02905c Two-component response regulator SA14-24 K07668 vicR; two-component system, OmpR family, response regulator VicR
D IB211_00001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IB211_01447 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D IB211_00346 Sensor histidine kinase VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D IB211_03098c Vancomycin response regulator VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D IB211_00655 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D IB211_01018 Vancomycin B-type resistance protein VanW K18346 vanW; vancomycin resistance protein VanW
D IB211_01760 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D IB211_01761 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D IB211_01762 Alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D IB211_02749 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D IB211_02747 D-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D IB211_01852c Phosphate regulon transcriptional regulatory protein PhoB (SphR) K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D IB211_02587 Stage 0 sporulation two-component response regulator (Spo0A) K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D IB211_00696c DP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D IB211_00069 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D IB211_00072 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IB211_01882 Ammonium transporter K04751 glnB; nitrogen regulatory protein P-II 1
D IB211_01422 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IB211_02422c Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03339 Butyrate-acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02976 Butyrate-acetoacetate CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03132c Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03340 Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02977 Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03131c Butyrate-acetoacetate CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_02421c Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D IB211_03208 Short chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D IB211_01747 Short chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D IB211_02982c Short chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D IB211_03082 Short chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_02653c RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D IB211_00455 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D IB211_00398c regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IB211_01638c transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IB211_02293c Two-component sensor kinase yesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D IB211_02294c Two-component response regulator yesN K07720 yesN; two-component system, response regulator YesN
D IB211_02012c D-binding response regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D IB211_01292 Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D IB211_02033c UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ibu02024]
D IB211_00959 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D IB211_00177 R-binding protein Hfq K03666 hfq; host factor-I protein
D IB211_01769 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D IB211_01770 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D IB211_00444c D-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IB211_03195 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IB211_00275c High-affinity leucine-specific transport system, periplasmic binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IB211_03196 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D IB211_00274c High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D IB211_03197 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D IB211_00273c Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D IB211_03198 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IB211_00272c Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IB211_03199 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IB211_00271c Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IB211_00907c Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IB211_00398c regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IB211_01638c transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IB211_01447 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D IB211_00248 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D IB211_00440c Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D IB211_00244 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D IB211_00439c Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D IB211_00245 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D IB211_00438c Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D IB211_00246 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D IB211_00437c Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D IB211_00247 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D IB211_00436c Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D IB211_02436c Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_03287c Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_01713c Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_01860 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_00268 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_01131c Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_01346 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_02349 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_02435c Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_03286c Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_01712c Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_01861 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_01130c Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_01344 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_02434c Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_03285c Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_01711c Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_01862 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_01129c Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_01345 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_03284c Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IB211_01863 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IB211_01128c Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IB211_02433c Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IB211_01864 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IB211_03283c Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IB211_03386c Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IB211_02102 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IB211_02681 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IB211_03025c Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D IB211_01673c Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IB211_00266 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IB211_02191c Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IB211_01486c Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IB211_02587 Stage 0 sporulation two-component response regulator (Spo0A) K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D IB211_01852c Phosphate regulon transcriptional regulatory protein PhoB (SphR) K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D IB211_02290c Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D IB211_02291c Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:ibu02040]
D IB211_00307 L-Cystine ABC transporter, periplasmic cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein
D IB211_01971c RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D IB211_02653c RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D IB211_02695c Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ibu04980]
D IB211_00620c periplasmic protein kinase ArgK K07588 MMAA; GTPase [EC:3.6.5.-]
D IB211_00593c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_00594c Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D IB211_00202 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ibu01501]
D IB211_02683 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D IB211_00248 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D IB211_00440c Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D IB211_00244 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D IB211_00439c Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D IB211_00245 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D IB211_00438c Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D IB211_00246 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D IB211_00437c Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D IB211_00247 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D IB211_00436c Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D IB211_00644 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_00524 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_02685 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_02743 Regulatory sensor-transducer, BlaR1/MecR1 family K02172 blaR1; bla regulator protein blaR1
D IB211_02684 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00643 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_02742 Beta-lactamase repressor BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00523 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00325c Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D IB211_00434c Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D IB211_02093c Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D IB211_00223 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D IB211_02388 Metallo-beta-lactamase precursor K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:ibu01502]
D IB211_00346 Sensor histidine kinase VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D IB211_03098c Vancomycin response regulator VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D IB211_00655 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D IB211_01785c D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IB211_00163c Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IB211_02059c Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IB211_01784c UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D IB211_01029 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IB211_01031 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IB211_01761 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D IB211_01760 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D IB211_01762 Alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D IB211_01018 Vancomycin B-type resistance protein VanW K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ibu01503]
D IB211_01648c N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_02284 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_01472c hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_00208 Serine protease, DegP/HtrA, do-like K04771 degP; serine protease Do [EC:3.4.21.107]
D IB211_00411 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ibu01000]
C 01001 Protein kinases [BR:ibu01001]
D IB211_01630 Serine/threonine protein kinase PrkC, regulator of stationary phase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D IB211_00386 Anti-sigma B factor RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D IB211_02645c Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IB211_00445c Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IB211_02903c Phosphate regulon sensor protein PhoR (SphS) K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D IB211_01447 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D IB211_00346 Sensor histidine kinase VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D IB211_02749 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D IB211_02293c Two-component sensor kinase yesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D IB211_02357c hypothetical protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D IB211_02363c Ethanolamine sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D IB211_03218c sensory box histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D IB211_02461 Sensory box histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D IB211_02543c Sensory box histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ibu01009]
D IB211_01813c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IB211_00793c Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D IB211_01629 Protein serine/threonine phosphatase PrpC, regulation of stationary phase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:ibu01002]
D IB211_00235c Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D IB211_00016c Endopeptidase spore protease Gpr K06012 gpr; spore protease [EC:3.4.24.78]
D IB211_01532 Sporulation sigma-E factor processing peptidase (SpoIIGA) K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D IB211_01817c glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IB211_01840c glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D IB211_01067c Glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase
D IB211_02116 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IB211_01421 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D IB211_01426 Glutamate synthase large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D IB211_01714c Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IB211_03152 Glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D IB211_02675 glutamine-hydrolyzing asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D IB211_00859 DJ-1/YajL/PfpI superfamily protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D IB211_00038c Sortase A, LPXTG specific K07284 srtA; sortase A [EC:3.4.22.70]
D IB211_02779c NPQTN specific sortase B K08600 srtB; sortase B [EC:3.4.22.71]
D IB211_00173 hypothetical protein K07052 K07052; CAAX protease family protein
D IB211_01244c Abortive infection protein K07052 K07052; CAAX protease family protein
D IB211_02949c hypothetical protein K07052 K07052; CAAX protease family protein
D IB211_00655 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D IB211_01761 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D IB211_02431c Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D IB211_01585 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D IB211_02155c Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IB211_02622 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D IB211_00964 Tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D IB211_02694 Tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D IB211_03023c Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D IB211_01181 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP-specific) K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D IB211_03216 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IB211_00029 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IB211_00382 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IB211_00142 Deblocking aminopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D IB211_01576 Stage IV sporulation pro-sigma-K processing enzyme (SpoIVFB) K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D IB211_01547 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D IB211_02437 D-aminopeptidase dipeptide-binding protein DppA K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D IB211_00427 putative amino acid amidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D IB211_00644 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_00524 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_02685 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_02743 Regulatory sensor-transducer, BlaR1/MecR1 family K02172 blaR1; bla regulator protein blaR1
D IB211_00352c D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D IB211_00208 Serine protease, DegP/HtrA, do-like K04771 degP; serine protease Do [EC:3.4.21.107]
D IB211_00411 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D IB211_02595 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_02933c D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_01602 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_01859 Beta-lactamase class C K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D IB211_01589 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D IB211_02624c Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D IB211_01591 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D IB211_00021c SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D IB211_00375 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D IB211_03126 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D IB211_00852 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D IB211_02209c Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D IB211_02585 Stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D IB211_00435c Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D IB211_01349 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D IB211_00863 peptidase, U32 family large subunit K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D IB211_00218 hypothetical protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:ibu01003]
D IB211_02939 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D IB211_00878c 1,2-diacylglycerol 3-glucosyltransferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D IB211_02928c Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D IB211_02093c Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D IB211_00857 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D IB211_02034c Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D IB211_01488 Cyclic beta-1,2-glucan synthase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D IB211_02085c Glycosyltransferase K19423 epsE; glycosyltransferase EpsE [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ibu01005]
D IB211_01167 Glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D IB211_02034c Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D IB211_03004c Undecaprenyl-phosphate galactosephosphotransferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ibu01011]
D IB211_01032 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IB211_02909 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D IB211_01429 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D IB211_00898 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D IB211_01659c UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D IB211_01028 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D IB211_00151 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D IB211_01785c D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D IB211_00163c Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IB211_02059c Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D IB211_02757c Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D IB211_00435c Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D IB211_01029 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D IB211_01031 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D IB211_02041c Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D IB211_02093c Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D IB211_00223 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D IB211_01027 Cell division protein FtsI K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D IB211_02595 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_02933c D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_01602 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D IB211_01859 Beta-lactamase class C K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D IB211_00655 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D IB211_01761 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D IB211_00038c Sortase A, LPXTG specific K07284 srtA; sortase A [EC:3.4.22.70]
D IB211_02779c NPQTN specific sortase B K08600 srtB; sortase B [EC:3.4.22.71]
D IB211_00862 YceG like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D IB211_02876 Spore cortex-lytic enzyme, lytic transglycosylase SleB K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D IB211_00355 Stage II sporulation protein D (SpoIID) K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D IB211_01648c N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_02284 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_01472c hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ibu01004]
D IB211_02322c Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D IB211_02324c 3-oxoacyl synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D IB211_02320c 3-oxoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D IB211_02321c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_02389 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_00276c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_01449c 3-oxoacyl reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D IB211_02319c (3R)-hydroxymyristoyl dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D IB211_02323c Enoyl reductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D IB211_00656 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D IB211_00795c putative tesA-like protease K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D IB211_00907c Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IB211_02197c Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D IB211_01573 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D IB211_01607 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ibu01008]
D IB211_00147 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:ibu01006]
D IB211_01693c Octaprenyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D IB211_01544 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D IB211_00176 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:ibu01007]
D IB211_01157 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_02036 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_01038c Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D IB211_01685c Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IB211_02035c Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D IB211_02179c Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IB211_02755c Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IB211_00190 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IB211_00183 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IB211_01161 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IB211_02258c Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IB211_02204c Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IB211_03379 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IB211_02654c Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D IB211_01416 Aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D IB211_03378 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IB211_00014c Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IB211_03371 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IB211_00252c Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IB211_02950c Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IB211_00865 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IB211_02062 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IB211_02063 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IB211_01815c Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D IB211_02514 Biosynthetic Aromatic amino acid aminotransferase alpha K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D IB211_01425 L,L-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D IB211_00937 Aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D IB211_01501 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D IB211_02429c Cystathionine beta-lyase, Bsu PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_03068 Putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_02278c Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D IB211_02066c Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D IB211_01531 Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D IB211_03209c Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D IB211_00384c Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ibu03000]
D IB211_00710 Modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_02471c D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_01211 D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_03264c Transcriptional regulator, AraC family K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D IB211_00748 Transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D IB211_01473 Transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D IB211_00995c Transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D IB211_03080 Stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D IB211_02408 Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IB211_01364 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D IB211_03294c putative transcriptional regulator of N-Acetylglucosamine utilization, GntRNA family K03710 K03710; GntR family transcriptional regulator
D IB211_03321 putative transcriptional regulator of N-Acetylglucosamine utilization, GntRNA family K03710 K03710; GntR family transcriptional regulator
D IB211_00957 transcriptional regulator of N-Acetylglucosamine utilization, GntRNA family K03710 K03710; GntR family transcriptional regulator
D IB211_03130c Transcriptional regulator, GntRNA family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D IB211_00967 Transcriptional regulator, GntRNA family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D IB211_00458c Transcriptional regulator, GntRNA family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D IB211_00677 Transcriptional regulator, GntRNA family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D IB211_02506 putative transcriptional regulator of pyridoxine metabolism K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D IB211_03331c Transcriptional regulator, GntRNA family K07979 ytrA; GntR family transcriptional regulator
D IB211_02489c hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D IB211_01409c hypothetical protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D IB211_00753 Transcriptional regulator, MerRNA family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D IB211_01234 Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D IB211_01757c Peroxide stress regulator PerRNA, FUR family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D IB211_02444c Transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D IB211_00398c regulatory subunit of cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IB211_01638c transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D IB211_00820c Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D IB211_00187c Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D IB211_02139c Transcriptional regulator yidN, Cro/CI family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D IB211_00517c Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D IB211_01797c Iron-dependent repressor IdeR/DtxR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D IB211_01904c hypothetical protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D IB211_01800c Iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D IB211_02154 Mn-dependent transcriptional regulator MntRNA K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D IB211_02684 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00643 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_02742 Beta-lactamase repressor BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00523 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00416c Biotin operon repressor / Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D IB211_02571 sigma-L-dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D IB211_00910c Nitrogen regulation protein NtrC K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D IB211_00322c hypothetical protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D IB211_01464c transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D IB211_02213c Sugar diacid utilization regulator SdaR K02647 cdaR; carbohydrate diacid regulator
D IB211_02586c D-binding domain of ModE K02019 modE; molybdate transport system regulatory protein
D IB211_01112c hypothetical protein K07726 K07726; putative transcriptional regulator
D IB211_01063 Transcriptional regulator, Cro/CI family K07727 K07727; putative transcriptional regulator
D IB211_00709 hypothetical protein K07727 K07727; putative transcriptional regulator
D IB211_01311c hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D IB211_02607 Transition state regulatory protein AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D IB211_01960c hypothetical protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D IB211_02925 Transition state regulatory protein AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D IB211_00903c Stage V sporulation protein T, AbrB family transcriptional regulator (SpoVT) K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D IB211_01927c Stage V sporulation protein T, AbrB family transcriptional regulator (SpoVT) K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D IB211_03367 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IB211_03369 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IB211_01609 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D IB211_01688c Arginine pathway regulatory protein ArgR, repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D IB211_02935 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D IB211_00239 Stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D IB211_01846c Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D IB211_01024 Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ibu03021]
D IB211_03016c D-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IB211_02249c D-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IB211_02248c D-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IB211_01623 D-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D IB211_01971c RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D IB211_00882c hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IB211_03233 RNA polymerase sigma factor SigV K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IB211_00585 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IB211_02183c hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D IB211_01533 RNA polymerase sporulation specific sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D IB211_01535 RNA polymerase sporulation specific sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D IB211_01165 RNA polymerase sporulation specific sigma factor SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D IB211_02133c RNA polymerase sporulation specific sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D IB211_01664c RNA polymerase sporulation specific sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor
D IB211_02653c RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D IB211_00573 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D IB211_01697c Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D IB211_02103 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D IB211_00386 Anti-sigma B factor RsbT K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D IB211_02533c Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D IB211_02205c Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:ibu03019]
D IB211_02195c Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IB211_02897c Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D IB211_00365 Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D IB211_02682 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D IB211_00129c ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D IB211_00238 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IB211_02695c Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IB211_00228c Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D IB211_01813c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D IB211_02937 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D IB211_02710 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IB211_00177 R-binding protein Hfq K03666 hfq; host factor-I protein
D IB211_02164 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D IB211_01430 Hypothetical ATP-binding protein UPF0042, contains P-loop K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:ibu03011]
D IB211_01498c SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D IB211_01540 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D IB211_03039c SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D IB211_03017c SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D IB211_03028c SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D IB211_02879c SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D IB211_02220c SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D IB211_03031c SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D IB211_00785c SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D IB211_03046c SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D IB211_03018c SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D IB211_02221c SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D IB211_03019c SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D IB211_03032c SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D IB211_00229c SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D IB211_01485c SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D IB211_03036c SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D IB211_02877c SSU ribosomal protein S18p or SSU ribosomal protein S18p, zinc-dependent K02963 RP-S18; small subunit ribosomal protein S18
D IB211_03041c SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D IB211_00017 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D IB211_01175 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D IB211_02105 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D IB211_03042c LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D IB211_03045c LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D IB211_03044c LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D IB211_03033c LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D IB211_03030c LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D IB211_03212 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D IB211_02107 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D IB211_02104 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D IB211_02108 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D IB211_00786c LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D IB211_03035c LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D IB211_03026c LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D IB211_03038c LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D IB211_03015c LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D IB211_03029c LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D IB211_01577 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D IB211_00926c LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D IB211_03238c LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D IB211_03040c LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D IB211_03043c LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D IB211_03034c LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D IB211_03236c LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D IB211_01716 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D IB211_03037c LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D IB211_03027c LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D IB211_01978c LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D IB211_01570 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D IB211_02101 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D IB211_03389c LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D IB211_00927c LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D IB211_03020c LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D IB211_02222c Firmicutes ribosomal L7Ae family protein K07590 RP-L7A; large subunit ribosomal protein L7A
D IB211_rRNA00006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IB211_rRNA00005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IB211_rRNA00001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IB211_rRNA00004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IB211_rRNA00002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ibu03009]
D IB211_02195c Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IB211_01009 GTP-binding protein Era K03595 era; GTPase
D IB211_03235c GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D IB211_00573 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D IB211_01697c Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D IB211_02103 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D IB211_02214c Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D IB211_01477c Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D IB211_01627 Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D IB211_01021 Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D IB211_03375 rRNA small subunit methyltransferase, glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D IB211_01025 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D IB211_02608c rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D IB211_01690c RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D IB211_00237 Ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D IB211_00027c TrmH family tRNA/rRNA methyltransferase YacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D IB211_02911 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D IB211_02044 SAM dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D IB211_01628 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D IB211_02811c Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D IB211_00263c RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D IB211_01603 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D IB211_01567c Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D IB211_00917 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D IB211_00141 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D IB211_00234c Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D IB211_02172c Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D IB211_01787c Ribosomal-protein-S5p-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D IB211_01483c 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D IB211_02265c Ribosomal protein S12p Asp88 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D IB211_03241c Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D IB211_02100c Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D IB211_01336 Small protein similar to cysteinyl-tRNA synthetase K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D IB211_00238 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D IB211_01631 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D IB211_01572 GTP-binding protein EngA K03977 engA; GTPase
D IB211_01582 50S ribosomal subunit maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D IB211_01976c GTP-binding protein HflX K03665 hflX; GTPase
D IB211_01778c YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IB211_00144 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D IB211_00578 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D IB211_00572 transcription termination protein NusA K09748 rimP; ribosome maturation factor RimP
D IB211_00004 hypothetical protein K14761 rlbA; ribosome-associated protein
D IB211_02184c Iojap protein K09710 ybeB; ribosome-associated protein
D IB211_01008 metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D IB211_02187c RNA binding protein K07574 yhbY; RNA-binding protein
D IB211_00422 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D IB211_03081c GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D IB211_01569 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ibu03016]
D IB211_00897c tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D IB211_01157 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_02036 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_00252c Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D IB211_00183 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D IB211_02258c Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IB211_00190 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D IB211_01038c Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D IB211_02755c Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IB211_02204c Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D IB211_03379 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IB211_00865 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D IB211_02654c Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D IB211_00014c Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IB211_02950c Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D IB211_03371 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D IB211_02179c Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D IB211_01161 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D IB211_03378 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D IB211_02062 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D IB211_02063 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D IB211_01685c Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IB211_02035c Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D IB211_00162c D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D IB211_00867 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D IB211_02556 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D IB211_03253c hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D IB211_02871c hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D IB211_02049 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D IB211_00580 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D IB211_00819c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_02919c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_01778c YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D IB211_00176 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D IB211_00360 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D IB211_00128c tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D IB211_01727 Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D IB211_03388c Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D IB211_02189c Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D IB211_01416 Aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D IB211_00047c Cys-tRNA(Pro) deacylase YbaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D IB211_03355 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D IB211_00584 tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D IB211_00171 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D IB211_00560 MiaB family protein, possibly involved in tRNA or rRNA modification K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D IB211_02198c tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D IB211_01482c tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D IB211_02700c tRNA (cytosine34-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D IB211_02201c 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D IB211_00127c tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D IB211_00790 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D IB211_01677c S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D IB211_00227c Epoxyqueuosine (oQ) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D IB211_01876c Iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D IB211_01674c tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D IB211_00336 tRNA S(4)U 4-thiouridine synthase (former ThiI) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D IB211_03214 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D IB211_01789c molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D IB211_02168c YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D IB211_01790c ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D IB211_02096 CsdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D IB211_01053 UPF0348 protein family K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D IB211_02682 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D IB211_00228c Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ibu03012]
D IB211_00577 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D IB211_00928c Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D IB211_01782c ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D IB211_01541 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D IB211_02218c Translation elongation factor Tu K02358 tuf; elongation factor Tu
D IB211_02219c Translation elongation factor G K02355 fusA; elongation factor G
D IB211_00590 Translation elongation factor K02355 fusA; elongation factor G
D IB211_01780c Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D IB211_01543 Ribosome recycling factor K02838 frr; ribosome recycling factor
D IB211_02269c Methylase of polypeptide chain release factor K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D IB211_03335 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D IB211_03021c Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D IB211_01182 Translation elongation factor P K02356 efp; elongation factor P
D IB211_02955c Peptide chain release factor 2, programmed frameshift-containing K02836 prfB; peptide chain release factor 2
D IB211_00328 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ibu03110]
D IB211_00757 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D IB211_01392c ClpB protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D IB211_01590 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D IB211_00793c Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D IB211_02937 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D IB211_02710 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IB211_02938 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IB211_01618 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IB211_01742c Chaperonin (heat shock protein 33) K04083 hslO; molecular chaperone Hsp33
D IB211_02936 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D IB211_03083c hypothetical protein K13993 HSP20; HSP20 family protein
D IB211_00755 Molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D IB211_02709 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D IB211_00208 Serine protease, DegP/HtrA, do-like K04771 degP; serine protease Do [EC:3.4.21.107]
D IB211_00411 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D IB211_03216 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IB211_00029 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IB211_00382 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D IB211_00470c Peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D IB211_02095 hypothetical protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D IB211_01047 Thioredoxin K03671 TXN; thioredoxin
D IB211_01257c Thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:ibu04131]
D IB211_02558c hypothetical protein K07192 FLOT; flotillin
D IB211_02287c Hexokinase K00844 HK; hexokinase [EC:2.7.1.1]
D IB211_00380c D-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IB211_00842 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IB211_00793c Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ibu03051]
D IB211_00793c Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ibu03032]
D IB211_00010 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D IB211_00710 Modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_02471c D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_01211 D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_01911 D-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D IB211_00405 D-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D IB211_00001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IB211_03213 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D IB211_00215c DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D IB211_02774 Helicase loader DnaI K02315 dnaC; DNA replication protein DnaC
D IB211_02792 Helicase loader DnaI K02315 dnaC; DNA replication protein DnaC
D IB211_01972c DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D IB211_01938c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02878c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02759 Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_01433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IB211_01549 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D IB211_00003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_01956c DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_00871 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IB211_03383c DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IB211_01767c DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IB211_01583 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D IB211_02174c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IB211_01653c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IB211_00109c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IB211_00009 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IB211_01071c DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IB211_00007 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IB211_01074c DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IB211_02199c DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D IB211_02449c DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D IB211_02806 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D IB211_02819c DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ibu03036]
D IB211_00710 Modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_02471c D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_01211 D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_02195c Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D IB211_02558c hypothetical protein K07192 FLOT; flotillin
D IB211_01911 D-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D IB211_00405 D-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D IB211_00001 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D IB211_00177 R-binding protein Hfq K03666 hfq; host factor-I protein
D IB211_02192c Chromosome partition protein smc K03529 smc; chromosome segregation protein
D IB211_01598 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D IB211_01599 Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D IB211_00419 hypothetical protein K13052 divIC; cell division protein DivIC
D IB211_02212c Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IB211_00728c Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D IB211_02040c Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D IB211_01026 hypothetical protein K03586 ftsL; cell division protein FtsL
D IB211_01033 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D IB211_01030 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D IB211_01454c Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D IB211_02211c Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IB211_01034 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IB211_00217 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D IB211_01648c N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_02284 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_01472c hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_03376 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D IB211_00181 Cell division initiation protein DivIVA K04074 divIVA; cell division initiation protein
D IB211_00180 FtsZ-interacting protein K09772 sepF; cell division inhibitor SepF
D IB211_00525c Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D IB211_00221 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D IB211_01791 Cell division protein FtsW K05837 rodA; rod shape determining protein RodA
D IB211_03368 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D IB211_03367 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IB211_03369 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IB211_00128c tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D IB211_03375 rRNA small subunit methyltransferase, glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D IB211_02198c tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D IB211_01441c hypothetical protein K04763 xerD; integrase/recombinase XerD
D IB211_01669c Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D IB211_01646c putative integrase/recombinase K04763 xerD; integrase/recombinase XerD
D IB211_01592 GTP-binding protein EngB K03978 engB; GTP-binding protein
D IB211_01432 Cytoplasmic hypothetical protein DUF199, a subgroup K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:ibu03400]
D IB211_00019c Methylated-D--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D IB211_01741c Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D IB211_00944c D-3-methyladenine glycosylase II K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D IB211_02883 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D IB211_02530c 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D IB211_02023 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D IB211_01970c 8-oxo-dGTPase Bsu YtkD / 8-oxo-GTPase Bsu YtkD K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D IB211_00219 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D IB211_00424c hypothetical protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D IB211_01415c Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D IB211_00880 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D IB211_01179 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D IB211_00143 Single-stranded-D-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D IB211_01653c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IB211_00109c DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D IB211_02174c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D IB211_00531c Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D IB211_00536c Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D IB211_01019 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D IB211_00942 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D IB211_02249c D-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D IB211_02248c D-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D IB211_03016c D-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D IB211_01623 D-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D IB211_03337 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D IB211_00172 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D IB211_01012 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D IB211_00975 Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D IB211_00174 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D IB211_01695c Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D IB211_01694c Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D IB211_01433 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D IB211_01549 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D IB211_00003 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_01956c DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D IB211_00871 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D IB211_03383c DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D IB211_01767c DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D IB211_01938c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02878c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02759 Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02469c Very-short-patch mismatch repair endonuclease (G-T specific) K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D IB211_00119c RecD-like DNA helicase YrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D IB211_00528c RecD-like DNA helicase YrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D IB211_02268c RecA protein K03553 recA; recombination protein RecA
D IB211_01667c Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D IB211_01666c Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D IB211_01668c Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D IB211_01624 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D IB211_01647c DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D IB211_00005 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D IB211_00873 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IB211_02477 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D IB211_01010 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D IB211_00665 Recombination protein RecR K06187 recR; recombination protein RecR
D IB211_01687c DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D IB211_01979c ATP-dependent nuclease, subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D IB211_01980c ATP-dependent nuclease, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D IB211_03088c CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D IB211_00009 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IB211_01071c DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D IB211_00007 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IB211_01074c DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D IB211_02199c DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D IB211_01911 D-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D IB211_00405 D-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D IB211_02056 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D IB211_01117 hypothetical protein K03502 umuC; DNA polymerase V
D IB211_00021c SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D IB211_02267c Regulatory protein RecX K03565 recX; regulatory protein
D IB211_02750 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D IB211_00579 3'-to-5' oligoribonuclease A K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ibu03029]
D IB211_00577 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D IB211_00928c Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D IB211_01541 Translation elongation factor Ts K02357 tsf; elongation factor Ts
D IB211_02218c Translation elongation factor Tu K02358 tuf; elongation factor Tu
D IB211_02219c Translation elongation factor G K02355 fusA; elongation factor G
D IB211_00590 Translation elongation factor K02355 fusA; elongation factor G
D IB211_01009 GTP-binding protein Era K03595 era; GTPase
D IB211_01685c Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D IB211_02258c Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D IB211_03379 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D IB211_00014c Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D IB211_02755c Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D IB211_02581 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IB211_02583 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IB211_01418 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D IB211_01419 Aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D IB211_01417 Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D IB211_01938c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02878c Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02759 Single-stranded D-binding protein K03111 ssb; single-strand DNA-binding protein
D IB211_02937 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D IB211_02936 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D IB211_02710 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IB211_02709 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D IB211_02938 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IB211_01618 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D IB211_00819c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_02919c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_03386c Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D IB211_00793c Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ibu02000]
D IB211_00089c ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D IB211_01274 Transport ATP-binding protein CydD K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D IB211_01908 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D IB211_02463c hypothetical protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D IB211_00088c Lipid A export ATP-binding/permease protein MsbA K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D IB211_01275 Transport ATP-binding protein CydC K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D IB211_01909 Lipid A export ATP-binding/permease protein MsbA K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D IB211_02462c ABC transporter ATP-binding/transmembrane protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D IB211_00023 Lipid A export ATP-binding/permease protein MsbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D IB211_00024 Multidrug resistance ABC transporter ATP-binding and permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D IB211_00139 Lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D IB211_02037c ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D IB211_01171 ATPase component of ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein
D IB211_01719c Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D IB211_01718c Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D IB211_01717c Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D IB211_01562c ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IB211_00952c Spermidine Putrescine ABC transporter permease component potD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D IB211_01563c Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D IB211_00953c Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D IB211_01564c Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D IB211_00954c Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D IB211_01565c Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D IB211_00955c Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D IB211_00569 periplasmic component of ABC-type nitrate/sulfonate/bicarbonate transport system K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D IB211_00570 hypothetical protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D IB211_00571 Alkanesulfonates ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D IB211_01156 Sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IB211_02300c Multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D IB211_02398 Sugar ABC transporter sugar-binding protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein
D IB211_02400 N-Acetyl-D-glucosamine ABC transport system, permease protein K10201 ngcF; N-acetylglucosamine transport system permease protein
D IB211_02401 ABC-type sugar transport system, permease component K10202 ngcG; N-acetylglucosamine transport system permease protein
D IB211_02290c Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D IB211_02291c Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D IB211_02288c Galactose/methyl galactoside ABC transport system, permease protein MglC K10541 mglC; methyl-galactoside transport system permease protein
D IB211_02289c Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D IB211_03361c hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D IB211_01749c bmp family protein K07335 bmpA; basic membrane protein A and related proteins
D IB211_02303c ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D IB211_03359c hypothetical protein K23535 nupB; general nucleoside transport system permease protein
D IB211_03358c Putative deoxyribose-specific ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D IB211_02302c Unspecified monosaccharide ABC transport system, permease component 2 K23536 nupC; general nucleoside transport system permease protein
D IB211_03360c Putative deoxyribose-specific ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IB211_02304c Sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D IB211_03263c ABC transporter substrate-binding protein - sugar transport K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IB211_01107c Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IB211_03154 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IB211_02411 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D IB211_03155 Trehalose/maltose transport inner membrane protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D IB211_03262c Maltose/maltodextrin ABC transporter, permease protein MalF K02025 ABC.MS.P; multiple sugar transport system permease protein
D IB211_01154 N-Acetyl-D-glucosamine ABC transport system, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D IB211_02412 Multiple sugar ABC transporter, membrane-spanning permease protein MsmF K02025 ABC.MS.P; multiple sugar transport system permease protein
D IB211_02413 hypothetical protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IB211_03261c ABC transporter, membrane spanning protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IB211_01155 ABC-type sugar transport system, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D IB211_02651c Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D IB211_02650c Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D IB211_02649c Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D IB211_02648c Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D IB211_00307 L-Cystine ABC transporter, periplasmic cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein
D IB211_00308 Amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D IB211_00249 Amino acid ABC transporter, amino acid-binding/permease protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D IB211_00250 Amino acid ABC transporter, amino acid-binding/permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D IB211_00251 Amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D IB211_00302 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D IB211_03195 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IB211_00275c High-affinity leucine-specific transport system, periplasmic binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D IB211_03196 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D IB211_00274c High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D IB211_03197 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D IB211_00273c Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D IB211_03198 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IB211_00272c Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D IB211_03199 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IB211_00271c Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D IB211_00815c Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D IB211_00816c Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D IB211_00817c Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D IB211_00856c ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D IB211_00946 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D IB211_00855c ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D IB211_00947 hypothetical protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D IB211_00854c Methionine ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D IB211_00948 Methionine ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D IB211_02892 polar amino acid ABC transporter, substrate-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D IB211_02893 ABC transporter membrane-spanning permease - glutamine transport K02029 ABC.PA.P; polar amino acid transport system permease protein
D IB211_02894 Glutamate transport ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D IB211_00248 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D IB211_00440c Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D IB211_00244 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D IB211_00439c Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D IB211_00245 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D IB211_00438c Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D IB211_00246 Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D IB211_00437c Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D IB211_00247 Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D IB211_00436c Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D IB211_00083c Nickel ABC transporter, periplasmic nickel-binding protein NikA K15584 nikA; nickel transport system substrate-binding protein
D IB211_00082c Nickel transport system permease protein NikB K15585 nikB; nickel transport system permease protein
D IB211_00081c Nickel transport system permease protein NikC K15586 nikC; nickel transport system permease protein
D IB211_00080c Nickel transport ATP-binding protein NikD K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D IB211_00079c Nickel transport ATP-binding protein NikE K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D IB211_02436c Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_03287c Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_01713c Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_01860 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_00268 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_01131c Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_01346 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_02349 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D IB211_02435c Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_03286c Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_01712c Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_01861 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_01130c Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_01344 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D IB211_02434c Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_03285c Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_01711c Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_01862 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_01129c Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_01345 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D IB211_03284c Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IB211_01863 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IB211_01128c Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IB211_02433c Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D IB211_01864 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IB211_03283c Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D IB211_01898c Heme transporter IsdDEF, lipoprotein IsdE K25113 htsA; heme transport system substrate-binding protein
D IB211_01897c Heme transporter IsdDEF, permease component IsdF K25114 htsB; heme transport system permease protein
D IB211_01896c Heme transporter analogous to IsdDEF, ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D IB211_01899c Cell surface glycoprotein 1 precursor K25119 shp; heme transport system cell surface heme-binding protein
D IB211_01368c Vitamin B12 ABC transporter, B12-binding component BtuF K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D IB211_01371c ABC transporter (iron B12 siderophore hemin), periplasmic substrate-binding component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D IB211_01372c Vitamin B12 ABC transporter, B12-binding component BtuF K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D IB211_00540 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D IB211_01370c Vitamin B12 ABC transporter, permease component BtuC K02015 ABC.FEV.P; iron complex transport system permease protein
D IB211_00541 hypothetical protein K02015 ABC.FEV.P; iron complex transport system permease protein
D IB211_01369c ABC transporter (iron B12 siderophore hemin), ATP-binding component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D IB211_00542 ABC transporter (iron B12 siderophore hemin), ATP-binding component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D IB211_01187c Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D IB211_01236 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D IB211_01185c ABC transporter 3 K09816 znuB; zinc transport system permease protein
D IB211_01238 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D IB211_01186c ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D IB211_01237 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D IB211_01522 Additional substrate-specific component CbiN of cobalt ECF transporter K02009 cbiN; cobalt/nickel transport protein
D IB211_01523 Transmembrane component CbiQ of energizing module of cobalt ECF transporter K02008 cbiQ; cobalt/nickel transport system permease protein
D IB211_01521 Substrate-specific component CbiM of cobalt ECF transporter K02007 cbiM; cobalt/nickel transport system permease protein
D IB211_01524 ATPase component CbiO of energizing module of cobalt ECF transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D IB211_00417 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D IB211_00807 Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IB211_01271 Substrate-specific component of predicted ECF transporter K16926 htsT; energy-coupling factor transport system substrate-specific component
D IB211_01278 Substrate-specific component of predicted ECF transporter K16926 htsT; energy-coupling factor transport system substrate-specific component
D IB211_01334 Substrate-specific component CbrT of predicted cobalamin ECF transporter K16927 cbrT; energy-coupling factor transport system substrate-specific component
D IB211_01272 Transmembrane component of energizing module of predicted ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D IB211_00805 Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D IB211_02048 Transmembrane component of ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D IB211_01279 Transmembrane component of energizing module of predicted ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D IB211_02045 ATPase component of ECF transporter K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IB211_02047 ATPase component of ECF transporter K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IB211_01280 Duplicated ATPase component of energizing module of predicted ECF transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IB211_01273 Duplicated ATPase component of energizing module of predicted ECF transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D IB211_02087c O-antigen export system permease protein RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D IB211_02086c Teichoic acid export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D IB211_01320 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein
D IB211_01319 ABC-type multidrug transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein
D IB211_01321 Mucin 2 precursor K25153 gldG; gliding motility-associatede transport system auxiliary component
D IB211_03329c hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D IB211_03330c ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D IB211_02211c Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D IB211_02212c Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D IB211_01963 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D IB211_01340 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D IB211_00376c hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D IB211_01962 ABC Transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IB211_00377c ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IB211_01339 ABC-type multidrug transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D IB211_00823 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D IB211_02677 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D IB211_00638c Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D IB211_00822 Cell division transporter, ATP-binding protein FtsE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IB211_02676 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IB211_02147c ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IB211_00639c Cell division transporter, ATP-binding protein FtsE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D IB211_03061 Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D IB211_01879 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D IB211_01451 TrkA domain protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D IB211_02377c Anion permease ArsB/NhaD-like K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D IB211_00899c Na+-driven multidrug efflux pump K26939 norM; MATE family, multidrug efflux pump
D IB211_00077c Na+-driven multidrug efflux pump K26939 norM; MATE family, multidrug efflux pump
D IB211_03162c Na+ driven multidrug efflux pump K26939 norM; MATE family, multidrug efflux pump
D IB211_01304c hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D IB211_02918c Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D IB211_00648c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_00134 Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_02026c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_01354c Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D IB211_02175c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_00886c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_00692c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_00136c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_01463c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_02277 Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_01649c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_01402 Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_01380c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_01199 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D IB211_00555c Multi antimicrobial extrusion protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump
D IB211_02423c hypothetical protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D IB211_03159 Oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D IB211_03227 Oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D IB211_00825c hypothetical protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D IB211_00642 Macrolide-efflux protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D IB211_02092 hypothetical protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D IB211_00559c hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D IB211_01013 Catabolite repression HPr-like protein Crh K02784 ptsH; phosphocarrier protein HPr
D IB211_00653 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D IB211_00689c Von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D IB211_01637 Formate efflux transporter K21993 fdhC; formate transporter
D IB211_03373 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D IB211_02217c Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D IB211_01035 Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D IB211_00884 hypothetical protein K08364 merP; periplasmic mercuric ion binding protein
D IB211_00095c hypothetical protein K08364 merP; periplasmic mercuric ion binding protein
D IB211_00836 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IB211_00876c Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IB211_02693 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IB211_02010c Propanediol utilization polyhedral body protein PduA K27260 pduA; bacterial microcompartment shell protein
D IB211_02637c Ethanolamine utilization protein similar to PduA/PduJ K04027 eutM; ethanolamine utilization protein EutM
D IB211_03170 hypothetical protein K19540 frlA; fructoselysine transporter
D IB211_03306c hypothetical protein K06296 gerKB; spore germination protein KB
D IB211_01796c Metal transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D IB211_01265 Metal transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D IB211_02522c L-lactate permease K03303 lutP; lactate permease
D IB211_02156c Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D IB211_03116 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D IB211_01158 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D IB211_01159 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D IB211_00924c putative Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D IB211_01193c Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D IB211_02203c Potassium uptake protein, integral membrane component, KtrB K03498 trkH; trk/ktr system potassium uptake protein
D IB211_01194c Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D IB211_02202c Potassium uptake protein, integral membrane component, KtrA K03499 trkA; trk/ktr system potassium uptake protein
D IB211_02519c Uracil permease K02824 uraA; uracil permease
D IB211_00835c Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D IB211_02560c Chromate transport protein K07240 chrA; chromate transporter
D IB211_02561c Chromate transport protein K07240 chrA; chromate transporter
D IB211_00455 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D IB211_00454 hypothetical protein K21394 yiaM; TRAP-type transport system small permease protein
D IB211_02353c Sodium-dependent phosphate transporter K03324 yjbB; phosphate:Na+ symporter
D IB211_01059c Sodium-dependent phosphate transporter K03324 yjbB; phosphate:Na+ symporter
D IB211_02501c Stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D IB211_00403 hypothetical protein K06409 spoVB; stage V sporulation protein B
D IB211_00138c Malate permease K24180 mleP; malate permease and related proteins
D IB211_03127c hypothetical protein K24180 mleP; malate permease and related proteins
D IB211_02021 Transporter K24180 mleP; malate permease and related proteins
D IB211_00011c Transporter K24180 mleP; malate permease and related proteins
D IB211_00887c L-lysine permease K06895 lysE; L-lysine exporter family protein LysE/ArgO
D IB211_03201c Branched-chain amino acid transport protein azlC K26605 azlC; branched chain amino acid efflux pump
D IB211_03200c branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D IB211_02343c Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D IB211_02967 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D IB211_02973 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D IB211_02966 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D IB211_02972 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D IB211_02344c hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D IB211_02965 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D IB211_02055 Substrate-specific component RibU of riboflavin ECF transporter K23675 fmnP; riboflavin transporter
D IB211_00233c Substrate-specific component ThiT of thiamin ECF transporter K16789 thiT; thiamine transporter
D IB211_01030 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D IB211_01454c Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D IB211_03354c hypothetical protein K23242 mntP; manganese efflux pump family protein
D IB211_01190c Pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D IB211_00595c Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D IB211_00598c Acetyl-coenzyme A carboxyl transferase alpha chain K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D IB211_00597c hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D IB211_00432c Cytochrome c-type biogenesis protein CcdA (DsbD like) / Cytochrome c-type biogenesis protein ResA K06196 ccdA; cytochrome c-type biogenesis protein
D IB211_01801 hypothetical protein K04758 feoA; ferrous iron transport protein A
D IB211_01802 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D IB211_02153c Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D IB211_01803 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D IB211_02143c Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D IB211_02152c Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D IB211_02283c Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:ibu02044]
D IB211_00031c Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D IB211_00069 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D IB211_00072 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D IB211_00036c Type IV fimbrial assembly protein PilC K12278 mshG; MSHA biogenesis protein MshG
D IB211_02594c Late competence protein ComEA, D receptor K02237 comEA; competence protein ComEA
D IB211_00364 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D IB211_01356 competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D IB211_00870 hypothetical protein K02238 comEC; competence protein ComEC
D IB211_00068 hypothetical protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D IB211_03274 TrsK-like protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_00060 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_01110c hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_02764 TrsK-like protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_02829c TrsK-like protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_01226 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D IB211_00056 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC
D IB211_00266 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D IB211_02102 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D IB211_02681 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D IB211_03025c Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D IB211_01486c Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D IB211_02191c Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D IB211_01673c Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D IB211_03386c Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:ibu02042]
D IB211_00836 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IB211_00876c Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IB211_02693 Hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D IB211_02554 hemolysin III like membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ibu02022]
D IB211_02645c Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D IB211_02646c Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D IB211_00445c Osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D IB211_00444c D-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D IB211_00408 Two-component response regulator K07775 resD; two-component system, OmpR family, response regulator ResD
D IB211_02903c Phosphate regulon sensor protein PhoR (SphS) K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D IB211_02905c Two-component response regulator SA14-24 K07668 vicR; two-component system, OmpR family, response regulator VicR
D IB211_01447 sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D IB211_00346 Sensor histidine kinase VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D IB211_03098c Vancomycin response regulator VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D IB211_02749 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D IB211_02747 D-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D IB211_01852c Phosphate regulon transcriptional regulatory protein PhoB (SphR) K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D IB211_03111c D-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D IB211_01835 transcriptional activator protein K02483 K02483; two-component system, OmpR family, response regulator
D IB211_02587 Stage 0 sporulation two-component response regulator (Spo0A) K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D IB211_02293c Two-component sensor kinase yesM K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D IB211_02294c Two-component response regulator yesN K07720 yesN; two-component system, response regulator YesN
D IB211_02012c D-binding response regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D IB211_02357c hypothetical protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D IB211_02363c Ethanolamine sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D IB211_02364c Ethanolamine two-component response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D IB211_02358c D-binding response regulator, LuxR family K22010 pdtaR; two-component system, response regulator PdtaR
D IB211_01423 Ethanolamine two-component response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D IB211_03218c sensory box histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D IB211_02461 Sensory box histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D IB211_02543c Sensory box histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:ibu02035]
D IB211_00307 L-Cystine ABC transporter, periplasmic cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein
D IB211_00031c Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D IB211_00069 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D IB211_00072 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ibu04812]
D IB211_00525c Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D IB211_00087c hypothetical protein K18640 parM; plasmid segregation protein ParM
D IB211_01034 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IB211_03376 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D IB211_03368 Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D IB211_03367 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D IB211_03369 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ibu04147]
D IB211_00793c Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D IB211_02695c Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D IB211_00380c D-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D IB211_02699c Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D IB211_00842 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D IB211_01585 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D IB211_01991c Alkyl hydroperoxide reductase subunit C-like protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D IB211_02558c hypothetical protein K07192 FLOT; flotillin
D IB211_02710 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D IB211_02937 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D IB211_00552c Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D IB211_01981c Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D IB211_02218c Translation elongation factor Tu K02358 tuf; elongation factor Tu
D IB211_00867 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D IB211_00907c Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D IB211_03338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00295 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_00601c 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D IB211_03024c Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D IB211_02071c Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D IB211_02072c Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D IB211_03349 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D IB211_02296c Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D IB211_02931c 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D IB211_02376 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D IB211_01422 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D IB211_01530 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D IB211_02207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D IB211_00383c D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D IB211_02120 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D IB211_01148 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D IB211_02698c Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:ibu02048]
D IB211_03088c CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D IB211_03087c CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D IB211_03094c CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D IB211_03089c CRISPR-associated RecB family exonuclease Cas4b K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D IB211_03092c CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D IB211_03091c CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D IB211_03093c CRISPR-associated protein, CT1134 family K19119 cas5d; CRISPR-associated protein Cas5d
D IB211_02567c ulcer associated adenine specific DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D IB211_00710 Modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_02471c D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_01211 D-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D IB211_02563 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D IB211_02564 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D IB211_02058c Programmed cell death toxin YdcE K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D IB211_02789c YafQ toxin protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D IB211_02790c D-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D IB211_00239 Stress-responsive transcriptional regulator K03973 pspC; phage shock protein C
D IB211_01905c prophage LambdaSa04, RelE/ParE family protein K19092 parE1_3_4; toxin ParE1/3/4
D IB211_01034 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D IB211_00525c Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D IB211_01157 glutamyl-Q-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_02036 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D IB211_00819c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D IB211_02919c Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ibu01504]
D IB211_01158 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D IB211_01159 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D IB211_02766 Tetracycline resistance protein TetW K18220 tetM; ribosomal protection tetracycline resistance protein
D IB211_00345 Ribosome protection-type tetracycline resistance group 2 protein K18220 tetM; ribosomal protection tetracycline resistance protein
D IB211_02037c ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D IB211_00642 Macrolide-efflux protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D IB211_02092 hypothetical protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D IB211_02024 Chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D IB211_00644 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_00524 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_02685 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D IB211_02743 Regulatory sensor-transducer, BlaR1/MecR1 family K02172 blaR1; bla regulator protein blaR1
D IB211_02684 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00643 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_02742 Beta-lactamase repressor BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00523 Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D IB211_00325c Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D IB211_00434c Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D IB211_01018 Vancomycin B-type resistance protein VanW K18346 vanW; vancomycin resistance protein VanW
D IB211_00655 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D IB211_00346 Sensor histidine kinase VanS K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D IB211_03098c Vancomycin response regulator VanR K18349 vanRC; two-component system, OmpR family, response regulator VanR
D IB211_01762 Alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D IB211_01760 D-alanine--D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D IB211_01761 D-alanyl-D-alanine carboxypeptidase K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ibu00537]
D IB211_02207 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D IB211_01585 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ibu03100]
D IB211_tRNA00026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00051 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00027 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00053 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D IB211_tRNA00032 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IB211_tRNA00034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D IB211_tRNA00047 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D IB211_tRNA00019 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IB211_tRNA00044 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D IB211_tRNA00016 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D IB211_tRNA00030 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IB211_tRNA00023 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D IB211_tRNA00040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IB211_tRNA00006 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IB211_tRNA00049 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D IB211_tRNA00021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IB211_tRNA00017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IB211_tRNA00042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IB211_tRNA00033 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D IB211_tRNA00031 tRNA-His K14226 tRNA-His; tRNA His
D IB211_tRNA00003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IB211_tRNA00052 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D IB211_tRNA00008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D IB211_tRNA00005 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IB211_tRNA00050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IB211_tRNA00048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D IB211_tRNA00038 tRNA-Met K14230 tRNA-Met; tRNA Met
D IB211_tRNA00041 tRNA-Met K14230 tRNA-Met; tRNA Met
D IB211_tRNA00046 tRNA-Met K14230 tRNA-Met; tRNA Met
D IB211_tRNA00018 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D IB211_tRNA00024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IB211_tRNA00022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D IB211_tRNA00013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IB211_tRNA00015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D IB211_tRNA00035 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IB211_tRNA00043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D IB211_tRNA00045 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D IB211_tRNA00036 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D IB211_tRNA00002 tRNA-Val K14237 tRNA-Val; tRNA Val
D IB211_tRNA00020 tRNA-Val K14237 tRNA-Val; tRNA Val
D IB211_rRNA00001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IB211_rRNA00004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D IB211_rRNA00002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D IB211_rRNA00006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D IB211_rRNA00005 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D IB211_02424c 3-hydroxyacyl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D IB211_01411 oxidoreductase, aldo/keto reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D IB211_00518 DH-dependent butanol dehydrogenase A K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D IB211_01412 putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D IB211_02921 putative flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D IB211_00672c FMN-dependent DH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D IB211_01831c Peptide methionine sulfoxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D IB211_02538 Alpha/beta hydrolase fold K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D IB211_00100 Alkyl hydroperoxide reductase protein C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D IB211_00393 Ferredoxin K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D IB211_00394 D-reducing hydrogenase subunit HoxF K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D IB211_00395 Periplasmic hydrogenase large subunit K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D IB211_01756c Superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D IB211_03309 Dihydroorotate dehydrogenase electron transfer subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D IB211_02611c Ribonucleotide reductase of class III (anaerobic), activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D IB211_02888 radical activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D IB211_02706 N6-adenine-specific D methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D IB211_02253c Radical SAM domain protein K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-]
D IB211_02663 Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D IB211_00654 hypothetical protein K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D IB211_01174c Acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D IB211_01141c Histone acetyltransferase HPA2 K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D IB211_02516c hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D IB211_02403 Lacto-N-biose phosphorylase K15533 K15533; 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
D IB211_03011 hypothetical protein K19422 epsD; glycosyltransferase EpsD [EC:2.4.-.-]
D IB211_01492 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D IB211_01997c Cob(I)alamin adenosyltransferase PduO K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D IB211_01057c Thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D IB211_00949c Fructoselysine kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D IB211_03067 Dihydroxyacetone kinase family protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D IB211_00851 UDP-galactose-lipid carrier transferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D IB211_01614 Hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D IB211_01164 Anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D IB211_01715c HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D IB211_00547 CAIB/BAIF family protein K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D IB211_01448c CAIB/BAIF family protein K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D IB211_03217 Macro domain, ADP-ribose binding module K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D IB211_01561c hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D IB211_00583c hypothetical protein K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D IB211_03107c Manganese-dependent protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D IB211_01596 protein tyrosine/serine phosphatase-like protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D IB211_01178 Hydrolase, HAD subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D IB211_03211 Phosphoesterase, DHH family protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D IB211_00192 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D IB211_00872 Ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D IB211_02225c N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D IB211_00326c N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D IB211_01625 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IB211_03147c Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D IB211_02948 Peptidoglycan N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D IB211_03145c Chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D IB211_03172 Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D IB211_03173 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D IB211_01308c Guanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D IB211_02439 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D IB211_03289c Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D IB211_02370c hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D IB211_02518c MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D IB211_01941c MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D IB211_02061c D(P)HX epimerase / D(P)HX dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D IB211_02863c Threonine dehydratase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D IB211_00461 L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D IB211_00950c Fructoselysine 3-epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D IB211_00306 Fructoselysine 3-epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D IB211_02384c Benzoyl-CoA reductase subunit BadG K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D IB211_02574 Benzoyl-CoA reductase subunit BadG K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D IB211_00146 carbamoylphosphate synthase large subunit K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D IB211_00683 Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D IB211_00682 Electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D IB211_00687 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D IB211_03316c Cation-transporting ATPase, E1-E2 family K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D IB211_02687c putative cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D IB211_00185c Lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D IB211_00652 Sugar/maltose fermentation stimulation protein like K06206 sfsA; sugar fermentation stimulation protein A
D IB211_00951c Glucosamine--fructose-6-phosphate aminotransferase K19510 gfrF; fructoselysine-6-phosphate deglycase
D IB211_02005c Propanediol dehydratase reactivation factor large subunit K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D IB211_02004c Propanediol dehydratase reactivation factor small subunit K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D IB211_00812 Ferredoxin K05337 fer; ferredoxin
D IB211_00684 Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D IB211_00685 Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D IB211_00686 Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D IB211_00818c Iron-sulfur cluster assembly scaffold protein IscU/NifU-like K04488 iscU; nitrogen fixation protein NifU and related proteins
D IB211_01373c Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB K02585 nifB; nitrogen fixation protein NifB
D IB211_01376c hypothetical protein K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D IB211_01798c Flavodoxin K03839 fldA; flavodoxin I
D IB211_01833c Polyferredoxin NapH (periplasmic nitrate reductase) K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
D IB211_00206 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D IB211_00895c DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D IB211_02632c Ethanolamine permease K04023 eutH; ethanolamine transporter
D IB211_02000c Ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D IB211_02359c Ethanolamine utilization polyhedral-body-like protein EutL K04026 eutL; ethanolamine utilization protein EutL
D IB211_02639c Ethanolamine utilization polyhedral-body-like protein EutL K04026 eutL; ethanolamine utilization protein EutL
D IB211_02365c Ethanolamine utilization protein similar to PduV K04029 eutP; ethanolamine utilization protein EutP
D IB211_00167 Propanediol utilization protein PduV K04029 eutP; ethanolamine utilization protein EutP
D IB211_01989c Propanediol utilization protein PduV K04029 eutP; ethanolamine utilization protein EutP
D IB211_02631c Ethanolamine utilization protein EutQ K04030 eutQ; ethanolamine utilization protein EutQ
D IB211_02366c Propanediol utilization polyhedral body protein PduU K04031 eutS; ethanolamine utilization protein EutS
D IB211_00165 Ethanolamine utilization protein similar to PduU K04031 eutS; ethanolamine utilization protein EutS
D IB211_00166 hypothetical protein K04031 eutS; ethanolamine utilization protein EutS
D IB211_01990c Ethanolamine utilization protein similar to PduU K04031 eutS; ethanolamine utilization protein EutS
D IB211_00179 proline synthase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D IB211_00877c hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D IB211_01730c Spore cortex-lytic enzyme K01449 cwlJ; cell wall hydrolase
D IB211_01172c Spore cortex-lytic enzyme, lytic transglycosylase SleB K01449 cwlJ; cell wall hydrolase
D IB211_00330 Spore cortex-lytic enzyme CwlJ K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D IB211_01995c Cob(III)alamin reductase or Cob(II)alamin reductase K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D IB211_00043 Cold shock protein CspA K03704 cspA; cold shock protein
D IB211_02629 Transcription accessory protein (S1 R-binding domain) K06959 tex; protein Tex
D IB211_01621 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D IB211_00006 OrfX K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D IB211_00420 RNA binding protein K07571 K07571; S1 RNA binding domain protein
D IB211_00848 Metallo-beta-lactamase family protein, R-specific K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D IB211_01588 Cell division trigger factor K03545 tig; trigger factor
D IB211_00471c tmR-binding protein SmpB K03664 smpB; SsrA-binding protein
D IB211_00334 MG(2+) chelatase K07391 comM; magnesium chelatase family protein
D IB211_01724c Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
D IB211_01726 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D IB211_00240 Methylated-D--protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D IB211_00537c DNA repair protein RadC K03630 radC; DNA repair protein RadC
D IB211_01584 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D IB211_01007 endonuclease containing a URI domain K07461 K07461; putative endonuclease
D IB211_02200c Rossmann fold nucleotide-binding protein Smf K04096 smf; DNA processing protein
D IB211_00485 Terminase large subunit K06909 xtmB; phage terminase large subunit
D IB211_01495 ATPase, AAA family K07478 ycaJ; putative ATPase
D IB211_00704 Mobile element protein K07481 K07481; transposase, IS5 family
D IB211_02491 Mobile element protein K07481 K07481; transposase, IS5 family
D IB211_01708c Mobile element protein K07481 K07481; transposase, IS5 family
D IB211_01891 Mobile element protein K07481 K07481; transposase, IS5 family
D IB211_01913c Mobile element protein K07481 K07481; transposase, IS5 family
D IB211_01959c Mobile element protein K07481 K07481; transposase, IS5 family
D IB211_01910 hypothetical protein K07481 K07481; transposase, IS5 family
D IB211_03141 Mobile element protein K07483 K07483; transposase
D IB211_01895 Mobile element protein K07486 K07486; transposase
D IB211_01987 Mobile element protein K07493 K07493; putative transposase
D IB211_03255c Mobile element protein K07496 K07496; putative transposase
D IB211_00103 Mobile element protein K07496 K07496; putative transposase
D IB211_00990c Mobile element protein K07496 K07496; putative transposase
D IB211_01967c Mobile element protein K07496 K07496; putative transposase
D IB211_02800 Mobile element protein K07496 K07496; putative transposase
D IB211_00341 Mobile element protein K07496 K07496; putative transposase
D IB211_02166c Mobile element protein K07496 K07496; putative transposase
D IB211_03142 Mobile element protein K07497 K07497; putative transposase
D IB211_00708c Mobile element protein K07497 K07497; putative transposase
D IB211_02785c hypothetical protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D IB211_01259c Phage shock protein E precursor K03972 pspE; phage shock protein E
D IB211_01766c hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D IB211_01878c hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D IB211_02275 hypothetical protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D IB211_02671 putative transporter, similarity to citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D IB211_02125 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D IB211_02978 hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D IB211_00351c sodium-dependent transporter, putative K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D IB211_02194c hypothetical protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D IB211_01739c Sodium/glycine symporter GlyP K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D IB211_00323c Sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D IB211_01377 Branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D IB211_01650 hypothetical protein K06333 cotJB; spore coat protein JB
D IB211_01651 Polypeptide composition of the spore coat protein CotJC K06334 cotJC; spore coat protein JC
D IB211_03385c R-binding protein Jag K06346 jag; spoIIIJ-associated protein
D IB211_02606c Spore maturation protein A K06373 spmA; spore maturation protein A
D IB211_02605c Spore maturation protein B K06374 spmB; spore maturation protein B
D IB211_01163 hypothetical protein K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D IB211_00197 Stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D IB211_00348 Stage II sporulation protein required for processing of pro-sigma-E (SpoIIR) K06387 spoIIR; stage II sporulation protein R
D IB211_01706c Stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D IB211_01705c Stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D IB211_01704c Stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D IB211_01703c Stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D IB211_01702c Stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D IB211_01700c Stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D IB211_01699c Stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D IB211_01633 Stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D IB211_00469 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D IB211_02807c Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_02833 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_02019 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_01288 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_01290 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_02144c Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_03148 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_02338 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D IB211_00718c hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D IB211_00733 hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D IB211_01578c Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_02465c hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D IB211_03281 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_02492c hypothetical protein K06400 spoIVCA; site-specific DNA recombinase
D IB211_01016 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_02777 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D IB211_00902 Stage V sporulation protein AC (SpoVAC) K06405 spoVAC; stage V sporulation protein AC
D IB211_01984 Stage V sporulation protein AD (SpoVAD) K06406 spoVAD; stage V sporulation protein AD
D IB211_01985 Stage V sporulation protein AE (SpoVAE) K06407 spoVAE; stage V sporulation protein AE
D IB211_02442c Dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A
D IB211_02441c Dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D IB211_02615c AAA ATPase, central region K06413 spoVK; stage V sporulation protein K
D IB211_02874 Small acid-soluble spore protein, beta-type SASP K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D IB211_01005 Stage IV sporulation protein K06438 yqfD; similar to stage IV sporulation protein
D IB211_03307c Spore germination protein GerKC K06297 gerKC; spore germination protein KC
D IB211_02038 Spore germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D IB211_00124 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D IB211_00557c ACT domain protein K07166 K07166; ACT domain-containing protein
D IB211_01006 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D IB211_01428 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
D IB211_00691 hypothetical protein K07273 acm; lysozyme
D IB211_02148c Macrolide-specific efflux protein macA precursor K02005 ABC.CD.TX; HlyD family secretion protein
D IB211_00640c putative RND efflux membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D IB211_00821 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D IB211_02009c Propanediol utilization polyhedral body protein PduB K27263 pduB; bacterial microcompartment shell protein
D IB211_02002c Propanediol utilization polyhedral body protein PduA K27266 pduJ; bacterial microcompartment shell protein
D IB211_02003c Propanediol utilization polyhedral body protein PduA K27267 pduK; bacterial microcompartment shell protein
D IB211_01993c Ethanolamine utilization protein similar to PduT K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D IB211_02647c Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D IB211_00522 Hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D IB211_00196c Ribonuclease BN K07058 K07058; membrane protein
C 99997 Function unknown
D IB211_01090c protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D IB211_00660c Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D IB211_01734 Alpha/beta hydrolase K06889 K06889; uncharacterized protein
D IB211_02739 Dienelactone hydrolase K06889 K06889; uncharacterized protein
D IB211_01866 Putative membrane protein K06890 K06890; uncharacterized protein
D IB211_00070c archaeal ATPase, fused to C-terminal DUF234 domain K06921 K06921; uncharacterized protein
D IB211_00904 hypothetical protein K06923 K06923; uncharacterized protein
D IB211_01120c hypothetical protein K06926 K06926; uncharacterized protein
D IB211_01932 hypothetical protein K06926 K06926; uncharacterized protein
D IB211_00321c UPF0251 protein K06933 K06933; uncharacterized protein
D IB211_03332 HD family hydrolase, diverged K06950 K06950; uncharacterized protein
D IB211_01484c KH domain RNA binding protein YlqC K06960 K06960; uncharacterized protein
D IB211_02511 acetyltransferase (putative) K06975 K06975; uncharacterized protein
D IB211_02674 hypothetical protein K06978 K06978; uncharacterized protein
D IB211_01853 hypothetical protein K07003 K07003; uncharacterized protein
D IB211_00700 hypothetical protein K07003 K07003; uncharacterized protein
D IB211_00353 Pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein
D IB211_00414c putative nicotinate-regulated transporter K07035 K07035; uncharacterized protein
D IB211_02161c Oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D IB211_00695c Oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D IB211_03181c TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D IB211_02381c TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D IB211_00291 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D IB211_00608 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D IB211_01003 hypothetical protein K07090 K07090; uncharacterized protein
D IB211_00362c transport protein K07090 K07090; uncharacterized protein
D IB211_02097 hypothetical protein K07090 K07090; uncharacterized protein
D IB211_02098 Conserved membrane protein, predicted permease K07090 K07090; uncharacterized protein
D IB211_02028c phosphoesterase K07095 K07095; uncharacterized protein
D IB211_01843c Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D IB211_03124 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D IB211_01587 Ser/Thr protein phosphatase family protein K07099 K07099; uncharacterized protein
D IB211_00415c Transcriptional repressor for DNA biosynthesis K07105 K07105; uncharacterized protein
D IB211_03190c hypothetical protein K07120 K07120; uncharacterized protein
D IB211_02500c 3-oxoacyl reductase K07124 K07124; uncharacterized protein
D IB211_01224 hypothetical protein K07126 K07126; uncharacterized protein
D IB211_00048c hypothetical protein K07126 K07126; uncharacterized protein
D IB211_01115c hypothetical protein K07126 K07126; uncharacterized protein
D IB211_00761c putative ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D IB211_02714c putative ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D IB211_01050c D(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D IB211_00358 D(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D IB211_01753c Ferredoxin K07138 K07138; uncharacterized protein
D IB211_02865c hypothetical protein K07149 K07149; uncharacterized protein
D IB211_00450 hypothetical protein K07149 K07149; uncharacterized protein
D IB211_02502 hypothetical protein K07150 K07150; uncharacterized protein
D IB211_03387c Protein YidD K08998 K08998; uncharacterized protein
D IB211_00556c hypothetical protein K09157 K09157; uncharacterized protein
D IB211_00649c hypothetical protein K09163 K09163; uncharacterized protein
D IB211_01692c hypothetical protein K09775 K09775; uncharacterized protein
D IB211_01312c DUF378 domain-containing protein K09779 K09779; uncharacterized protein
D IB211_01487c Signal recognition particle associated protein K09787 K09787; uncharacterized protein
D IB211_01894c hypothetical protein K09790 K09790; uncharacterized protein
D IB211_02354c UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D IB211_00621 hypothetical protein K09973 K09973; uncharacterized protein
D IB211_00241 hypothetical protein K01163 K01163; uncharacterized protein
D IB211_03237c hypothetical protein K07584 ysxB; uncharacterized protein
D IB211_00574 nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024