+D GENES KO
#
KEGG Orthology (KO) - Ideonella dechloratans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:idc00010]
D LRM40_04635 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_05120 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18190 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_03985 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LRM40_08920 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LRM40_07375 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LRM40_00265 class 1 fructose-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D LRM40_00235 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_15165 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_10295 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LRM40_00245 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LRM40_16130 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LRM40_00240 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LRM40_15185 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LRM40_13755 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LRM40_02285 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LRM40_11655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LRM40_15175 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LRM40_16945 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LRM40_10940 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LRM40_09210 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LRM40_09215 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_18870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LRM40_03835 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LRM40_14430 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D LRM40_15210 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D LRM40_07815 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D LRM40_09095 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_09105 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_11440 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_13840 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D LRM40_01160 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:idc00020]
D LRM40_07920 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LRM40_09380 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LRM40_07860 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LRM40_10500 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LRM40_11185 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LRM40_11180 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_16860 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LRM40_16855 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LRM40_13475 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D LRM40_07905 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LRM40_07910 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LRM40_07895 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LRM40_07900 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LRM40_11455 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D LRM40_00290 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LRM40_07885 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LRM40_01160 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D LRM40_09210 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LRM40_09215 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:idc00030]
D LRM40_03985 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LRM40_03975 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LRM40_05075 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LRM40_15710 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LRM40_00255 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LRM40_16135 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LRM40_03980 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LRM40_12440 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D LRM40_04155 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LRM40_11395 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LRM40_05070 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D LRM40_06180 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D LRM40_05065 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LRM40_09175 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D LRM40_13485 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D LRM40_00235 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_15165 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_07375 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LRM40_00265 class 1 fructose-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D LRM40_08920 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:idc00040]
D LRM40_21370 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LRM40_07685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LRM40_15710 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:idc00051]
D LRM40_15190 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LRM40_02120 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LRM40_08165 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LRM40_01370 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LRM40_05375 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LRM40_05370 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LRM40_08920 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LRM40_07375 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LRM40_00265 class 1 fructose-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D LRM40_03460 hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D LRM40_00235 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_15165 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_10295 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LRM40_03455 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LRM40_02675 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:idc00052]
D LRM40_05830 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LRM40_07685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LRM40_04635 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_05120 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18190 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_08920 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LRM40_05725 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:idc00053]
D LRM40_21370 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LRM40_02150 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:idc00500]
D LRM40_05725 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D LRM40_07685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LRM40_13160 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LRM40_05740 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D LRM40_05745 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D LRM40_05730 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D LRM40_18250 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D LRM40_05750 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D LRM40_18245 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D LRM40_18220 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D LRM40_18255 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D LRM40_05735 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D LRM40_08840 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D LRM40_08845 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D LRM40_04635 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_05120 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18190 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_03985 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LRM40_15190 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:idc00520]
D LRM40_05505 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LRM40_15190 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D LRM40_14830 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LRM40_12290 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D LRM40_15100 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LRM40_14495 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D LRM40_12065 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D LRM40_16390 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D LRM40_16145 NTP transferase domain-containing protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D LRM40_04070 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LRM40_06270 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LRM40_05260 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D LRM40_05270 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D LRM40_05265 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D LRM40_05255 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D LRM40_04635 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_05120 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18190 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_07685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LRM40_21370 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LRM40_05830 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LRM40_02150 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D LRM40_02675 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D LRM40_03985 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LRM40_08165 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LRM40_02120 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LRM40_01370 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LRM40_05375 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LRM40_05370 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LRM40_13160 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LRM40_13155 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D LRM40_13150 rfbH; lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D LRM40_07650 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D LRM40_05740 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:idc00620]
D LRM40_09095 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_09105 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_11440 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_09210 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LRM40_09215 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_19580 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D LRM40_03835 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LRM40_14430 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D LRM40_18870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LRM40_15210 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D LRM40_16965 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LRM40_16960 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LRM40_15175 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LRM40_10450 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LRM40_13890 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LRM40_13895 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LRM40_08075 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LRM40_07815 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D LRM40_13475 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D LRM40_06885 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D LRM40_07965 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LRM40_14555 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LRM40_09985 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D LRM40_16625 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D LRM40_09175 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D LRM40_15180 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LRM40_16360 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LRM40_07885 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LRM40_11455 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D LRM40_00290 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LRM40_06945 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LRM40_01160 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D LRM40_16945 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LRM40_10940 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LRM40_17755 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_11295 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D LRM40_17085 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D LRM40_03230 nifV; homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:idc00630]
D LRM40_09545 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D LRM40_09095 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_09105 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_11440 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_17755 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D LRM40_07885 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LRM40_07920 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LRM40_09380 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LRM40_07860 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_09255 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LRM40_07960 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D LRM40_07955 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LRM40_07940 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D LRM40_15895 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D LRM40_15890 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D LRM40_15875 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D LRM40_09175 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D LRM40_00250 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LRM40_05525 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LRM40_15670 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LRM40_00280 form I ribulose bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D LRM40_00275 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D LRM40_07090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07240 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07550 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09615 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_06140 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LRM40_10070 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LRM40_10060 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_10065 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D LRM40_13485 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D LRM40_19835 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D LRM40_05065 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LRM40_04665 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D LRM40_04660 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D LRM40_11625 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D LRM40_04655 NADH-quinone oxidoreductase subunit NuoF K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D LRM40_11620 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D LRM40_04650 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D LRM40_11615 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D LRM40_12575 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D LRM40_01710 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D LRM40_05905 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:idc00640]
D LRM40_09095 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_09105 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_11440 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_07975 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D LRM40_16965 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LRM40_16960 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_03005 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D LRM40_17930 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D LRM40_18555 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_10450 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LRM40_13890 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LRM40_13895 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LRM40_08075 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LRM40_04525 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D LRM40_07960 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D LRM40_07955 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LRM40_07940 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D LRM40_16855 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LRM40_16860 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LRM40_01195 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LRM40_07860 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:idc00650]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_17945 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D LRM40_04415 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_03005 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D LRM40_19580 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D LRM40_09250 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LRM40_16975 poly-beta-hydroxybutyrate polymerase N-terminal domain-containing protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LRM40_10390 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D LRM40_09255 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LRM40_19835 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D LRM40_07905 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LRM40_07910 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LRM40_07895 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LRM40_07900 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LRM40_08260 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D LRM40_08230 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LRM40_13475 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D LRM40_06425 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LRM40_08555 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D LRM40_08560 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D LRM40_10750 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D LRM40_14315 D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D LRM40_00085 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_11315 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_13140 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_11310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:idc00660]
D LRM40_00085 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_11315 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_13140 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_11310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LRM40_16855 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LRM40_16860 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LRM40_08025 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D LRM40_08035 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D LRM40_08040 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:idc00562]
D LRM40_11585 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LRM40_19815 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_01085 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_09660 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_01195 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LRM40_10295 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:idc00190]
D LRM40_10280 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D LRM40_10275 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D LRM40_10270 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D LRM40_10265 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D LRM40_10260 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D LRM40_10255 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D LRM40_10250 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D LRM40_10245 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D LRM40_10240 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D LRM40_10235 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D LRM40_10230 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D LRM40_10225 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D LRM40_10220 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D LRM40_10215 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D LRM40_08365 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D LRM40_07905 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LRM40_07910 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LRM40_07895 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LRM40_07900 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LRM40_04930 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LRM40_04935 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LRM40_04940 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LRM40_13665 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LRM40_14645 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LRM40_14650 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D LRM40_13690 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D LRM40_13710 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D LRM40_13715 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D LRM40_13700 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LRM40_13670 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LRM40_10550 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D LRM40_10545 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D LRM40_10540 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D LRM40_10535 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D LRM40_14655 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D LRM40_14660 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D LRM40_14665 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D LRM40_17050 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LRM40_17055 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LRM40_17060 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D LRM40_01045 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_09625 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_11435 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_15275 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_18970 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_01935 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LRM40_17120 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LRM40_01945 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LRM40_17150 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LRM40_01940 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LRM40_17115 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LRM40_01930 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LRM40_01950 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LRM40_17145 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LRM40_01915 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LRM40_17135 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LRM40_01925 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LRM40_17125 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LRM40_01920 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LRM40_17130 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LRM40_11365 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D LRM40_07770 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LRM40_08790 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LRM40_15005 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:idc00710]
D LRM40_00280 form I ribulose bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D LRM40_00275 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D LRM40_00240 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LRM40_15185 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LRM40_00245 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LRM40_16130 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LRM40_00235 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_15165 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_07375 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LRM40_00265 class 1 fructose-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D LRM40_00255 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LRM40_16135 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LRM40_12440 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D LRM40_00260 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D LRM40_10295 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LRM40_15710 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LRM40_03980 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LRM40_06945 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LRM40_16945 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LRM40_15180 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LRM40_16360 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LRM40_07885 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:idc00720]
D LRM40_10940 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LRM40_16945 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LRM40_06945 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LRM40_07885 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LRM40_11455 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D LRM40_00290 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LRM40_07905 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LRM40_07910 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LRM40_07895 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LRM40_07900 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LRM40_16860 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LRM40_16855 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_10500 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LRM40_09380 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LRM40_07860 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LRM40_10450 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LRM40_13890 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LRM40_13895 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LRM40_08075 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LRM40_07940 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D LRM40_09195 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LRM40_15020 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D LRM40_16960 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LRM40_16965 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LRM40_09095 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_09105 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_11440 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:idc00680]
D LRM40_18870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LRM40_03065 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D LRM40_04660 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D LRM40_11625 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D LRM40_04655 NADH-quinone oxidoreductase subunit NuoF K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D LRM40_11620 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D LRM40_04650 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D LRM40_11615 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D LRM40_04665 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D LRM40_06140 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LRM40_13485 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D LRM40_11655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LRM40_06945 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D LRM40_07885 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LRM40_00235 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_15165 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D LRM40_07375 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LRM40_00265 class 1 fructose-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D LRM40_08920 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LRM40_18490 NAD(P)-binding protein K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D LRM40_16965 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LRM40_16960 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LRM40_09095 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_09105 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_11440 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_10940 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LRM40_13755 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LRM40_02285 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LRM40_09365 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LRM40_12090 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LRM40_10820 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:idc00910]
D LRM40_18610 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LRM40_18615 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LRM40_01705 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D LRM40_01700 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D LRM40_01695 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D LRM40_18605 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_18600 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_18590 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_01680 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D LRM40_20050 nirB; nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D LRM40_20045 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D LRM40_03700 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D LRM40_03705 nifK; nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D LRM40_03695 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D LRM40_19970 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D LRM40_20140 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D LRM40_03070 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D LRM40_18305 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D LRM40_00880 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D LRM40_07090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07240 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07550 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09615 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_03930 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LRM40_03935 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D LRM40_00335 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D LRM40_02980 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LRM40_18580 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LRM40_04625 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:idc00920]
D LRM40_17235 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D LRM40_17250 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D LRM40_17255 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D LRM40_17260 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D LRM40_03430 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D LRM40_03440 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D LRM40_03435 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LRM40_02225 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D LRM40_02230 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LRM40_19045 DUF4922 domain-containing protein K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D LRM40_02240 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D LRM40_09145 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D LRM40_06610 soxA; sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D LRM40_06615 soxX; sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D LRM40_06600 soxY; thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D LRM40_06605 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D LRM40_06620 soxB; thiosulfohydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D LRM40_06590 soxC; sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D LRM40_06595 c-type cytochrome K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D LRM40_02855 sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D LRM40_09155 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D LRM40_00160 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D LRM40_17165 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D LRM40_06665 NAD(P)/FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D LRM40_04240 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LRM40_06715 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LRM40_11575 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LRM40_04610 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LRM40_00200 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LRM40_16415 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LRM40_08100 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D LRM40_14910 sfnG; dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
D LRM40_20510 Rieske 2Fe-2S domain-containing protein K15762 tmoC; toluene monooxygenase system ferredoxin subunit
D LRM40_19620 Rieske 2Fe-2S domain-containing protein K15762 tmoC; toluene monooxygenase system ferredoxin subunit
D LRM40_10055 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D LRM40_17940 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D LRM40_04405 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:idc00061]
D LRM40_10450 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LRM40_13890 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LRM40_13895 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LRM40_08075 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LRM40_00385 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D LRM40_05435 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D LRM40_05425 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LRM40_18025 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LRM40_05420 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LRM40_05440 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LRM40_05430 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_14700 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_17885 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_18540 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_10970 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LRM40_09705 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LRM40_16955 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LRM40_01275 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_02800 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_17675 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:idc00071]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_04420 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_04415 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LRM40_03005 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D LRM40_21240 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D LRM40_07630 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LRM40_01275 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_02800 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_17675 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_09015 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D LRM40_18870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LRM40_03835 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LRM40_14430 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:idc00561]
D LRM40_13485 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D LRM40_01265 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LRM40_05415 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LRM40_07480 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LRM40_02965 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LRM40_13760 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LRM40_11340 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LRM40_06805 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:idc00564]
D LRM40_13735 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D LRM40_01255 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D LRM40_16660 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D LRM40_03645 4Fe-4S dicluster domain-containing protein K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D LRM40_07480 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LRM40_02965 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LRM40_13760 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LRM40_11340 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LRM40_19815 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_01085 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_09660 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_05805 ugpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LRM40_08505 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D LRM40_08510 eutC; ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D LRM40_11000 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LRM40_11300 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LRM40_06390 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D LRM40_17320 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D LRM40_12405 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LRM40_16350 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D LRM40_05890 clsB; cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:idc00565]
D LRM40_16655 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D LRM40_19815 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_01085 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_09660 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:idc00592]
D LRM40_04420 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:idc01040]
D LRM40_06735 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LRM40_08950 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D LRM40_18560 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D LRM40_04440 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:idc00230]
D LRM40_10205 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D LRM40_04155 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LRM40_11395 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LRM40_08095 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LRM40_06510 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D LRM40_06725 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LRM40_15000 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D LRM40_09285 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D LRM40_10010 AIR synthase related protein K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D LRM40_15140 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D LRM40_15145 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D LRM40_15160 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D LRM40_16485 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LRM40_04810 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LRM40_17805 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D LRM40_01420 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_04860 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_14415 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_12370 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LRM40_09240 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LRM40_10670 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LRM40_11130 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LRM40_07080 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D LRM40_13450 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D LRM40_13455 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D LRM40_10660 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LRM40_07700 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D LRM40_13440 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D LRM40_07055 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D LRM40_03105 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LRM40_13925 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LRM40_13920 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LRM40_03920 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D LRM40_15860 hypothetical protein K01129 dgt; dGTPase [EC:3.1.5.1]
D LRM40_07045 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LRM40_06700 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D LRM40_10740 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D LRM40_10860 FHA domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LRM40_16890 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LRM40_11055 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LRM40_13910 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D LRM40_02890 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D LRM40_13350 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D LRM40_10605 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LRM40_17385 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D LRM40_19045 DUF4922 domain-containing protein K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D LRM40_05970 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D LRM40_02225 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D LRM40_02230 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LRM40_13515 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D LRM40_13525 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D LRM40_13530 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D LRM40_05710 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D LRM40_05715 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D LRM40_05720 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:idc00240]
D LRM40_12325 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LRM40_12335 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LRM40_13770 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LRM40_04515 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D LRM40_13765 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D LRM40_12445 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D LRM40_16770 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D LRM40_16490 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D LRM40_11015 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D LRM40_11130 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LRM40_06540 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D LRM40_06365 DUF45 domain-containing protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D LRM40_11645 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D LRM40_01420 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_04860 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_14415 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_12370 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LRM40_09350 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D LRM40_13775 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D LRM40_13375 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D LRM40_06865 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D LRM40_03105 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LRM40_13925 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LRM40_13920 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LRM40_09505 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D LRM40_08385 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LRM40_11390 thymidine phosphorylase family protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D LRM40_11790 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LRM40_04535 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D LRM40_04540 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D LRM40_04545 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D LRM40_04550 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:idc00250]
D LRM40_09900 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LRM40_12210 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LRM40_09945 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LRM40_01075 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LRM40_06925 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LRM40_11055 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LRM40_16485 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LRM40_13770 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LRM40_08260 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D LRM40_08230 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LRM40_03930 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LRM40_03935 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D LRM40_00880 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D LRM40_00830 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LRM40_07090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07240 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07550 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09615 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_12325 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LRM40_12335 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LRM40_07225 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LRM40_14830 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LRM40_08095 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:idc00260]
D LRM40_10440 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LRM40_08045 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LRM40_09940 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LRM40_07730 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D LRM40_09935 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D LRM40_15595 ltaE; low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D LRM40_06140 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LRM40_09175 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D LRM40_13485 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D LRM40_13755 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LRM40_02285 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LRM40_09365 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LRM40_12090 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LRM40_10820 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D LRM40_10175 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LRM40_10070 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LRM40_10060 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_10065 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D LRM40_11300 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LRM40_10075 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LRM40_03850 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LRM40_17425 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D LRM40_08070 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LRM40_08065 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:idc00270]
D LRM40_11575 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D LRM40_04610 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LRM40_10710 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LRM40_17285 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D LRM40_02255 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LRM40_02265 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LRM40_14900 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LRM40_16170 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D LRM40_13335 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D LRM40_17670 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D LRM40_09240 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LRM40_01415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_10380 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_15010 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LRM40_10440 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LRM40_08045 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LRM40_09940 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LRM40_00200 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LRM40_16415 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LRM40_10725 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D LRM40_08100 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D LRM40_01530 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_10810 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_02030 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LRM40_19495 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LRM40_02005 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LRM40_04240 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LRM40_06715 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LRM40_07885 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LRM40_10075 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LRM40_07670 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D LRM40_09365 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LRM40_12090 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:idc00280]
D LRM40_01530 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_10810 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_03005 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D LRM40_21240 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D LRM40_06450 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_04420 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LRM40_07960 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D LRM40_07955 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LRM40_07940 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D LRM40_00795 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D LRM40_01195 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LRM40_04525 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D LRM40_06430 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D LRM40_06440 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D LRM40_06435 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D LRM40_06425 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LRM40_08555 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D LRM40_08560 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:idc00290]
D LRM40_03850 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LRM40_08025 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D LRM40_08035 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D LRM40_08040 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D LRM40_00085 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_11315 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_13140 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_11310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LRM40_11305 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D LRM40_11420 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LRM40_01530 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_10810 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_09945 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LRM40_11295 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D LRM40_17085 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:idc00300]
D LRM40_09940 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LRM40_10440 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LRM40_08045 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LRM40_08410 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LRM40_16310 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D LRM40_08695 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D LRM40_12550 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LRM40_08700 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D LRM40_08685 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LRM40_19060 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LRM40_14885 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LRM40_11520 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D LRM40_12720 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D LRM40_04695 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LRM40_04700 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:idc00310]
D LRM40_11180 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_07630 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_08260 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D LRM40_08230 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LRM40_07625 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D LRM40_02420 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:idc00220]
D LRM40_12555 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D LRM40_01075 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LRM40_06925 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LRM40_12795 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D LRM40_20320 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D LRM40_05710 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D LRM40_05715 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D LRM40_05720 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D LRM40_07225 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LRM40_07090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07240 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07550 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09615 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_12325 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LRM40_12335 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LRM40_00880 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D LRM40_09945 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LRM40_10835 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D LRM40_05765 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D LRM40_04845 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D LRM40_00630 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D LRM40_12550 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LRM40_18445 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:idc00330]
D LRM40_13375 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D LRM40_09710 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D LRM40_12705 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D LRM40_09550 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D LRM40_16170 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D LRM40_09580 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D LRM40_16440 NAD(P)-binding protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D LRM40_09610 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D LRM40_08235 speB; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D LRM40_00205 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_16230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_15755 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D LRM40_15760 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D LRM40_09565 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D LRM40_18495 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D LRM40_12795 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D LRM40_00885 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D LRM40_00830 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LRM40_16240 ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D LRM40_14045 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LRM40_16085 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D LRM40_00455 proline iminopeptidase-family hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LRM40_10695 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LRM40_12635 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D LRM40_02420 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:idc00340]
D LRM40_04075 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D LRM40_11060 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D LRM40_04880 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D LRM40_04875 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D LRM40_04100 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D LRM40_04095 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D LRM40_04115 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D LRM40_04090 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D LRM40_20440 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_04085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_04080 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D LRM40_05930 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D LRM40_05925 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D LRM40_05910 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D LRM40_05900 hutF; formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D LRM40_05905 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:idc00350]
D LRM40_20440 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_04085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_01415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_10380 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_19400 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LRM40_09235 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D LRM40_19390 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D LRM40_15925 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D LRM40_18870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LRM40_03835 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LRM40_14430 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D LRM40_09910 flavin reductase family protein K23470 C1-hpah; 4-hydroxyphenylacetate 3-hydroxylase, reductase component [EC:1.5.1.36]
D LRM40_08230 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LRM40_17035 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:idc00360]
D LRM40_03610 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_17945 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D LRM40_20440 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_04085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_01415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_10380 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_19400 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LRM40_20530 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D LRM40_01175 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D LRM40_11030 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D LRM40_02420 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LRM40_16680 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D LRM40_00205 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_16230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_09385 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:idc00380]
D LRM40_12585 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D LRM40_12575 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D LRM40_12580 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D LRM40_19560 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D LRM40_11180 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_07630 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_00205 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_16230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_16680 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:idc00400]
D LRM40_00735 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LRM40_15940 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LRM40_03915 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D LRM40_07245 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D LRM40_13870 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D LRM40_03910 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D LRM40_12105 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D LRM40_10150 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D LRM40_15655 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LRM40_15600 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LRM40_15590 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D LRM40_08060 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D LRM40_15585 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D LRM40_08070 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LRM40_08065 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LRM40_12095 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D LRM40_12100 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D LRM40_20440 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_04085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_01415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_10380 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_03610 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:idc00410]
D LRM40_18530 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LRM40_16440 NAD(P)-binding protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D LRM40_05545 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LRM40_04535 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D LRM40_04540 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D LRM40_04545 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D LRM40_04550 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D LRM40_04525 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_03005 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D LRM40_01195 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:idc00430]
D LRM40_08615 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LRM40_16960 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LRM40_16965 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:idc00440]
D LRM40_02330 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D LRM40_02320 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:idc00450]
D LRM40_10710 PLP-dependent transferase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LRM40_02255 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LRM40_02265 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LRM40_06750 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LRM40_18950 molybdopterin-dependent oxidoreductase K17050 serA; selenate/chlorate reductase subunit alpha [EC:1.97.1.9 1.97.1.1]
D LRM40_18955 respiratory nitrate reductase subunit beta K17051 serB; selenate/chlorate reductase subunit beta [EC:1.97.1.9 1.97.1.1]
D LRM40_18965 chlorate reductase subunit gamma K17052 serC; selenate/chlorate reductase subunit gamma [EC:1.97.1.9 1.97.1.1]
D LRM40_02225 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D LRM40_02230 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LRM40_00875 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D LRM40_11605 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D LRM40_12650 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:idc00460]
D LRM40_08615 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LRM40_12210 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LRM40_06140 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:idc00470]
D LRM40_01445 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LRM40_02420 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LRM40_04730 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LRM40_07225 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LRM40_11205 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LRM40_04710 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LRM40_17425 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D LRM40_14885 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LRM40_11520 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D LRM40_20530 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D LRM40_01175 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D LRM40_11030 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:idc00480]
D LRM40_08615 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LRM40_14770 YbdK family carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LRM40_02030 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LRM40_19495 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LRM40_02005 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LRM40_09775 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LRM40_07380 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LRM40_05655 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_13565 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_15045 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_16480 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_17245 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_18340 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_19335 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_10500 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LRM40_03975 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LRM40_05075 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LRM40_10030 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D LRM40_17240 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D LRM40_16170 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:idc00540]
D LRM40_10965 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LRM40_04760 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LRM40_10975 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LRM40_10475 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LRM40_10960 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LRM40_10590 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LRM40_17795 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LRM40_11650 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LRM40_17790 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LRM40_10600 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LRM40_08170 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LRM40_14890 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LRM40_14895 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LRM40_07555 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D LRM40_13325 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D LRM40_07800 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D LRM40_00785 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LRM40_07370 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LRM40_12160 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LRM40_12165 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D LRM40_02960 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D LRM40_12170 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D LRM40_12180 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D LRM40_12125 glycosyltransferase family 9 protein K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:idc00541]
D LRM40_07685 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LRM40_05830 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LRM40_21370 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LRM40_02150 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D LRM40_02155 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LRM40_02165 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LRM40_13120 NAD(P)-dependent oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LRM40_02160 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LRM40_02170 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LRM40_13160 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LRM40_13155 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D LRM40_13150 rfbH; lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D LRM40_07650 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D LRM40_02120 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LRM40_08165 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LRM40_01370 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LRM40_05375 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LRM40_05370 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LRM40_15100 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LRM40_05255 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D LRM40_05260 Gfo/Idh/MocA family oxidoreductase K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D LRM40_05270 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D LRM40_05265 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:idc00550]
D LRM40_04070 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LRM40_06270 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LRM40_04725 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LRM40_04710 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LRM40_04695 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LRM40_04730 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LRM40_04700 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LRM40_11005 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LRM40_06375 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LRM40_08195 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LRM40_04705 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LRM40_04720 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LRM40_13875 transglycosylase domain-containing protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D LRM40_03875 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LRM40_16460 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LRM40_17525 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LRM40_16815 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LRM40_04690 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LRM40_02415 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LRM40_15125 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:idc00552]
D LRM40_06375 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LRM40_08195 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:idc00543]
D LRM40_11575 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:idc00730]
D LRM40_01625 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D LRM40_13830 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D LRM40_03200 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_03315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_10360 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_14810 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_01620 FAD-binding oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D LRM40_07215 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LRM40_01610 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D LRM40_16355 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D LRM40_06315 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LRM40_12460 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LRM40_10605 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:idc00740]
D LRM40_06085 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LRM40_06090 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LRM40_16275 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D LRM40_20365 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LRM40_06080 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LRM40_07810 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D LRM40_06255 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D LRM40_09910 flavin reductase family protein K23470 C1-hpah; 4-hydroxyphenylacetate 3-hydroxylase, reductase component [EC:1.5.1.36]
D LRM40_10205 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D LRM40_14025 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:idc00750]
D LRM40_05245 pyridoxamine 5'-phosphate oxidase family protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D LRM40_06170 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D LRM40_12090 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LRM40_04920 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D LRM40_05495 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D LRM40_09935 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:idc00760]
D LRM40_09900 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LRM40_09885 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D LRM40_09890 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D LRM40_19350 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D LRM40_01420 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_04860 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_14415 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LRM40_12370 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LRM40_06520 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D LRM40_11355 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D LRM40_16345 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D LRM40_04210 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LRM40_17650 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LRM40_17655 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LRM40_17665 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D LRM40_08230 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:idc00770]
D LRM40_00085 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_11315 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_13140 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LRM40_11310 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D LRM40_11305 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D LRM40_11420 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D LRM40_05540 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D LRM40_19660 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D LRM40_05545 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LRM40_02905 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D LRM40_08380 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D LRM40_04125 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D LRM40_14220 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D LRM40_05500 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D LRM40_01530 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_10810 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_04535 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D LRM40_04540 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D LRM40_04545 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D LRM40_04550 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D LRM40_18530 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:idc00780]
D LRM40_09475 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D LRM40_13720 biotin synthase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D LRM40_05440 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LRM40_05430 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_14700 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_17885 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_18540 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_10970 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LRM40_09705 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LRM40_16955 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LRM40_05565 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LRM40_05555 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LRM40_05560 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D LRM40_05550 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D LRM40_16110 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:idc00785]
D LRM40_02435 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D LRM40_02440 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_09210 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LRM40_09215 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LRM40_11185 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LRM40_11180 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LRM40_10070 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LRM40_10060 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LRM40_10065 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:idc00790]
D LRM40_16050 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D LRM40_07220 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D LRM40_06320 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D LRM40_12985 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D LRM40_05880 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D LRM40_15085 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D LRM40_12510 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D LRM40_12295 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D LRM40_11795 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LRM40_08080 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D LRM40_06085 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LRM40_11730 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D LRM40_15850 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LRM40_03605 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LRM40_03610 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LRM40_15855 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LRM40_16065 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LRM40_08720 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LRM40_09970 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D LRM40_16910 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D LRM40_09915 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D LRM40_11565 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D LRM40_05995 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D LRM40_09925 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D LRM40_20280 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D LRM40_06175 NTP transferase domain-containing protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D LRM40_03840 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:idc00670]
D LRM40_11795 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LRM40_09195 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LRM40_06140 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LRM40_06725 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LRM40_04810 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LRM40_15290 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LRM40_10060 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LRM40_02255 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LRM40_02265 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LRM40_11790 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LRM40_01710 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D LRM40_15020 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D LRM40_15030 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:idc00860]
D LRM40_08105 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LRM40_14000 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D LRM40_07235 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LRM40_13835 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LRM40_17325 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LRM40_02390 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LRM40_06950 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D LRM40_01970 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D LRM40_06515 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D LRM40_10510 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D LRM40_02395 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D LRM40_10865 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D LRM40_06960 uroporphyrinogen-III C-methyltransferase K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D LRM40_01670 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D LRM40_09140 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D LRM40_13665 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LRM40_14645 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LRM40_13670 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LRM40_20390 sirohydrochlorin chelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D LRM40_09790 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D LRM40_20410 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D LRM40_20425 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D LRM40_20385 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D LRM40_20415 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D LRM40_20400 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D LRM40_20405 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D LRM40_20395 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D LRM40_19905 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D LRM40_00710 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D LRM40_19895 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D LRM40_20465 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D LRM40_20435 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D LRM40_12465 CobD/CbiB family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D LRM40_20455 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D LRM40_20445 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D LRM40_19900 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D LRM40_20450 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D LRM40_05595 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:idc00130]
D LRM40_03010 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D LRM40_00890 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LRM40_06155 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D LRM40_14025 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LRM40_12070 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D LRM40_16190 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D LRM40_05825 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D LRM40_03860 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D LRM40_05875 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D LRM40_14570 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LRM40_17440 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LRM40_19400 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:idc00900]
D LRM40_07215 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LRM40_10995 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D LRM40_04165 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D LRM40_10795 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D LRM40_11110 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D LRM40_07140 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_14025 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LRM40_07210 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LRM40_21295 hypothetical protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D LRM40_14065 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LRM40_11005 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LRM40_12455 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:idc00906]
D LRM40_11275 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:idc00907]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_06425 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LRM40_04420 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D LRM40_00255 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LRM40_16135 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products [PATH:idc01057]
D LRM40_19980 SDR family oxidoreductase K14633 gra6; ketoreductase RED2 [EC:1.1.1.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:idc00523]
D LRM40_02155 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LRM40_02165 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LRM40_13120 NAD(P)-dependent oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LRM40_02160 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LRM40_02170 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LRM40_02210 class I SAM-dependent methyltransferase K13307 tylMI; dTDP-3-amino-3,6-dideoxy-alpha-D-glucopyranose N,N-dimethyltransferase [EC:2.1.1.235]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D LRM40_02165 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LRM40_13120 NAD(P)-dependent oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D LRM40_07925 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:idc00332]
D LRM40_14045 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LRM40_16085 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:idc00261]
D LRM40_02225 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D LRM40_02230 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LRM40_10440 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LRM40_08045 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LRM40_08410 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LRM40_16310 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:idc00521]
D LRM40_04635 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_05120 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18190 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_11585 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LRM40_02155 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LRM40_02165 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LRM40_13120 NAD(P)-dependent oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LRM40_02160 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LRM40_02170 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D LRM40_04635 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_05120 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18185 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LRM40_18190 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:idc00525]
D LRM40_02155 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LRM40_02165 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LRM40_13120 NAD(P)-dependent oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:idc00401]
D LRM40_12100 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D LRM40_20440 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_04085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_01415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_10380 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D LRM40_15655 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LRM40_15600 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D LRM40_05425 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LRM40_18025 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LRM40_05430 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_14700 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_17885 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_18540 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_09705 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LRM40_16955 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D LRM40_00385 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D LRM40_05435 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:idc00999]
D LRM40_14900 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LRM40_13870 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:idc00362]
D LRM40_04420 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LRM40_19510 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0
D LRM40_19515 phenol hydroxylase K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243]
D LRM40_19520 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243]
D LRM40_19525 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243]
D LRM40_19530 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243]
D LRM40_19535 2Fe-2S iron-sulfur cluster-binding protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243]
D LRM40_19545 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LRM40_19565 alpha/beta fold hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9]
D LRM40_09385 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D LRM40_19570 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D LRM40_19585 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D LRM40_19580 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D LRM40_19560 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D LRM40_19590 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D LRM40_19575 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D LRM40_03450 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D LRM40_17470 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D LRM40_18040 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D LRM40_03225 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D LRM40_03340 (2Fe-2S)-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D LRM40_10330 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D LRM40_04415 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LRM40_07630 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_17945 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:idc00627]
D LRM40_00205 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_16230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_14025 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D LRM40_11830 glnA; type I glutamate--ammonia ligase K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3]
C 00364 Fluorobenzoate degradation [PATH:idc00364]
D LRM40_06705 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D LRM40_14275 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:idc00625]
D LRM40_03835 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LRM40_14430 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D LRM40_18870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LRM40_03705 nifK; nitrogenase molybdenum-iron protein subunit beta K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D LRM40_03695 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D LRM40_03700 nifD; nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D LRM40_15210 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D LRM40_17750 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:idc00361]
D LRM40_19510 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0
D LRM40_19515 phenol hydroxylase K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243]
D LRM40_19520 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243]
D LRM40_19525 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243]
D LRM40_19530 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243]
D LRM40_19535 2Fe-2S iron-sulfur cluster-binding protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243]
D LRM40_06705 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D LRM40_14275 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D LRM40_19545 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LRM40_17750 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:idc00623]
D LRM40_19510 phenol hydroxylase subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0
D LRM40_19515 phenol hydroxylase K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243]
D LRM40_19520 MmoB/DmpM family protein K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243]
D LRM40_19525 aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243]
D LRM40_19530 phenol hydroxylase subunit P4 K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243]
D LRM40_19535 2Fe-2S iron-sulfur cluster-binding protein K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243]
D LRM40_19610 toluene monooxygenase K15760 tmoA; toluene monooxygenase system protein A [EC:1.14.13.236 1.14.13.-]
D LRM40_19615 toluene-4-monooxygenase system B family protein K15761 tmoB; toluene monooxygenase system protein B [EC:1.14.13.236 1.14.13.-]
D LRM40_20510 Rieske 2Fe-2S domain-containing protein K15762 tmoC; toluene monooxygenase system ferredoxin subunit
D LRM40_19620 Rieske 2Fe-2S domain-containing protein K15762 tmoC; toluene monooxygenase system ferredoxin subunit
D LRM40_19625 MmoB/DmpM family protein K15763 tmoD; toluene monooxygenase system protein D [EC:1.14.13.236 1.14.13.-]
D LRM40_19630 aromatic/alkene monooxygenase hydroxylase subunit beta K15764 tmoE; toluene monooxygenase system protein E [EC:1.14.13.236 1.14.13.-]
D LRM40_06705 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D LRM40_14275 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:idc00622]
D LRM40_19545 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LRM40_19565 alpha/beta fold hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9]
D LRM40_19560 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D LRM40_19590 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D LRM40_19575 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D LRM40_19570 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D LRM40_19585 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D LRM40_19580 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D LRM40_19635 2Fe-2S iron-sulfur cluster-binding protein K18293 cymAb; p-cymene methyl-monooxygenase electron transfer component [EC:1.18.1.3]
D LRM40_09385 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation [PATH:idc00633]
D LRM40_04260 nfsB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D LRM40_01125 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D LRM40_04370 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D LRM40_04375 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D LRM40_20110 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D LRM40_04275 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D LRM40_20105 NADH:ubiquinone oxidoreductase K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D LRM40_04280 HupU protein K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D LRM40_04420 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:idc00643]
D LRM40_09235 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D LRM40_19390 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D LRM40_15925 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D LRM40_00205 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_16230 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LRM40_19545 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D LRM40_19565 alpha/beta fold hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9]
C 00791 Atrazine degradation [PATH:idc00791]
D LRM40_20320 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D LRM40_20335 cysteine hydrolase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D LRM40_05710 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D LRM40_05715 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D LRM40_05720 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:idc00930]
D LRM40_09015 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D LRM40_05235 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:idc00621]
D LRM40_19590 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D LRM40_19575 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D LRM40_09385 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D LRM40_19570 dmpE; 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D LRM40_19585 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D LRM40_19580 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
C 00626 Naphthalene degradation [PATH:idc00626]
D LRM40_03835 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LRM40_14430 yiaY; L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D LRM40_18870 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:idc03020]
D LRM40_15520 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LRM40_15515 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LRM40_15350 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LRM40_07050 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:idc03010]
D LRM40_12110 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LRM40_11025 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LRM40_15450 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LRM40_15355 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LRM40_15395 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LRM40_10935 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LRM40_15500 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LRM40_15410 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LRM40_14505 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LRM40_15485 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LRM40_15360 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LRM40_15505 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LRM40_15365 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LRM40_15415 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LRM40_10310 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LRM40_12490 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LRM40_15435 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LRM40_10925 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LRM40_15460 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LRM40_12540 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LRM40_11510 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LRM40_15535 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LRM40_15465 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LRM40_15480 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LRM40_15475 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LRM40_15420 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LRM40_15405 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LRM40_15525 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LRM40_10920 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LRM40_15530 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LRM40_15540 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LRM40_14510 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LRM40_15430 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LRM40_15385 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LRM40_15445 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LRM40_15345 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LRM40_15400 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LRM40_12475 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LRM40_09040 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LRM40_14060 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LRM40_15455 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LRM40_15470 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LRM40_15425 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LRM40_04150 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D LRM40_14055 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LRM40_06745 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LRM40_15440 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LRM40_15390 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LRM40_12245 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LRM40_05410 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LRM40_06740 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LRM40_17880 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LRM40_09035 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LRM40_15370 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LRM40_02695 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02720 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02745 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02710 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LRM40_02735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LRM40_02760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LRM40_02715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LRM40_02740 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LRM40_02765 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:idc00970]
D LRM40_02705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_02730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_02755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_08110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_08125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_06215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_06970 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_06975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_01735 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_12775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_09815 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_09120 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LRM40_09125 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LRM40_08120 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LRM40_08135 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LRM40_08145 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LRM40_11225 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LRM40_04160 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LRM40_08115 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LRM40_08130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LRM40_08140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LRM40_08205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_11215 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_11220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_11230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_15570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_12385 tRNA-His K14226 tRNA-His; tRNA His
D LRM40_02700 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LRM40_02725 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LRM40_02750 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LRM40_07665 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_11045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_21365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_10285 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_11255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_11210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_06580 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LRM40_06585 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LRM40_06685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LRM40_15335 tRNA-Met K14230 tRNA-Met; tRNA Met
D LRM40_13980 tRNA-Met K14230 tRNA-Met; tRNA Met
D LRM40_04245 tRNA-Ile K14230 tRNA-Met; tRNA Met
D LRM40_16015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LRM40_09855 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LRM40_14070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LRM40_09065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LRM40_09715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LRM40_05960 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LRM40_07155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LRM40_10435 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LRM40_07360 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LRM40_15565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LRM40_04955 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LRM40_15555 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LRM40_15575 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LRM40_11400 tRNA-Val K14237 tRNA-Val; tRNA Val
D LRM40_11405 tRNA-Val K14237 tRNA-Val; tRNA Val
D LRM40_10735 tRNA-Val K14237 tRNA-Val; tRNA Val
D LRM40_12395 tRNA-Val K14237 tRNA-Val; tRNA Val
D LRM40_11595 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D LRM40_08105 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LRM40_16790 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LRM40_16785 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LRM40_16795 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LRM40_06480 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LRM40_08355 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LRM40_05865 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LRM40_02950 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LRM40_02955 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LRM40_09025 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LRM40_07145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LRM40_11605 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D LRM40_10460 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LRM40_12650 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LRM40_15290 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LRM40_07690 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LRM40_16325 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LRM40_06250 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LRM40_05250 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LRM40_17725 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LRM40_14035 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LRM40_11105 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LRM40_09045 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LRM40_09050 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LRM40_01285 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:idc03060]
D LRM40_15380 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LRM40_15550 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LRM40_10290 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LRM40_15325 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LRM40_15320 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LRM40_15330 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LRM40_17865 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LRM40_04965 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LRM40_13740 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LRM40_13955 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LRM40_10015 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D LRM40_13960 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LRM40_20160 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D LRM40_04895 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D LRM40_04900 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D LRM40_04905 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D LRM40_05470 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LRM40_06245 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:idc04122]
D LRM40_03200 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_03315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_10360 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_14810 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_04240 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LRM40_06715 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LRM40_07680 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D LRM40_17640 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LRM40_09915 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D LRM40_09970 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D LRM40_09920 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D LRM40_12785 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D LRM40_16910 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D LRM40_11565 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D LRM40_01615 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:idc03018]
D LRM40_14040 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LRM40_05515 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LRM40_11655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LRM40_10305 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LRM40_05390 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LRM40_12615 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LRM40_11040 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LRM40_17000 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LRM40_12240 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LRM40_10880 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LRM40_14130 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D LRM40_14245 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LRM40_11085 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LRM40_07770 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LRM40_08790 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LRM40_15005 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LRM40_12515 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:idc03030]
D LRM40_19865 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_11410 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_12200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LRM40_10005 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LRM40_09500 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LRM40_16335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LRM40_09770 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LRM40_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LRM40_10915 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LRM40_10850 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LRM40_21055 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_17025 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_09975 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LRM40_10955 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LRM40_07740 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LRM40_08735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:idc03410]
D LRM40_10400 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LRM40_15580 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LRM40_04190 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LRM40_04180 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LRM40_10455 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LRM40_08160 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LRM40_12655 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LRM40_15110 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LRM40_11810 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LRM40_16750 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LRM40_16765 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LRM40_07740 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LRM40_08825 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LRM40_08735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:idc03420]
D LRM40_10805 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LRM40_14300 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D LRM40_16930 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D LRM40_10375 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D LRM40_12415 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D LRM40_07705 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LRM40_19380 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LRM40_07740 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LRM40_08735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:idc03430]
D LRM40_11630 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LRM40_11740 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D LRM40_07705 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LRM40_19380 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LRM40_07835 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D LRM40_10575 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LRM40_07205 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LRM40_08825 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LRM40_21055 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_17025 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_12200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LRM40_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LRM40_10005 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LRM40_16335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LRM40_09500 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LRM40_19865 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_11410 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_09770 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LRM40_08735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:idc03440]
D LRM40_08825 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LRM40_21055 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_17025 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_05490 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LRM40_09995 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D LRM40_16845 recA; recombinase RecA K03553 recA; recombination protein RecA
D LRM40_07740 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LRM40_02370 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LRM40_02350 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LRM40_04805 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LRM40_01025 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LRM40_05150 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LRM40_09075 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D LRM40_09070 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D LRM40_09080 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LRM40_12200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LRM40_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LRM40_10005 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LRM40_16335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LRM40_09500 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LRM40_19865 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_11410 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_09770 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LRM40_01975 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LRM40_10930 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:idc03250]
D LRM40_10045 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LRM40_10465 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:idc02010]
D LRM40_17235 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D LRM40_17250 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D LRM40_17255 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D LRM40_17260 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D LRM40_01705 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D LRM40_01700 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D LRM40_01695 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D LRM40_03430 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D LRM40_03440 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D LRM40_03435 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LRM40_03785 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D LRM40_03780 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D LRM40_03790 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D LRM40_02305 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D LRM40_02315 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D LRM40_02310 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D LRM40_05850 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D LRM40_09585 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D LRM40_09600 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D LRM40_09595 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D LRM40_09590 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D LRM40_18235 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D LRM40_18230 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D LRM40_18225 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein
D LRM40_18240 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LRM40_05115 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LRM40_03960 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D LRM40_03950 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LRM40_08005 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LRM40_03945 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LRM40_08015 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LRM40_03965 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D LRM40_03940 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LRM40_08010 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LRM40_20350 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D LRM40_13355 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D LRM40_13415 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D LRM40_20345 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LRM40_13365 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LRM40_13425 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LRM40_20340 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LRM40_13370 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LRM40_13420 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LRM40_20330 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LRM40_13360 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LRM40_13430 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LRM40_05100 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D LRM40_05105 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D LRM40_05110 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D LRM40_01225 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D LRM40_01240 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D LRM40_01235 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D LRM40_01250 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D LRM40_01245 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D LRM40_17405 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D LRM40_17400 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D LRM40_17395 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D LRM40_17410 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D LRM40_07780 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LRM40_12285 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LRM40_12280 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D LRM40_12275 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D LRM40_12270 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LRM40_04490 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_04495 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_10120 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_04505 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D LRM40_04500 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D LRM40_04510 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D LRM40_15790 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D LRM40_15780 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D LRM40_15785 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D LRM40_15770 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D LRM40_01050 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_09765 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_10080 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_10085 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_13270 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14915 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14920 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14970 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_06780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_10105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_14930 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_14980 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_06785 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_10100 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_14925 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_14975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_06790 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_10095 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_14935 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_14985 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_06795 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_10090 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_14950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_20010 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D LRM40_20015 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D LRM40_04995 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D LRM40_05000 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D LRM40_05005 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D LRM40_05010 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D LRM40_05015 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D LRM40_13265 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D LRM40_13275 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D LRM40_13280 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D LRM40_13285 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D LRM40_13290 dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D LRM40_02075 capsular biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D LRM40_02065 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D LRM40_02070 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D LRM40_00560 ABC transporter permease K09696 natB; sodium transport system permease protein
D LRM40_00555 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D LRM40_08860 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D LRM40_08865 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LRM40_09780 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D LRM40_09785 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D LRM40_17705 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LRM40_03115 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LRM40_08935 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D LRM40_08930 ATP-binding cassette domain-containing protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D LRM40_00585 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D LRM40_04445 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D LRM40_04560 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D LRM40_13305 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D LRM40_16475 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:idc02060]
D LRM40_02690 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LRM40_02680 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D LRM40_02675 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D LRM40_03465 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D LRM40_03455 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LRM40_03460 hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D LRM40_16290 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:idc03070]
D LRM40_07445 TolC family protein K12340 tolC; outer membrane protein
D LRM40_08175 TolC family outer membrane protein K12340 tolC; outer membrane protein
D LRM40_02575 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D LRM40_14375 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D LRM40_02605 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D LRM40_14385 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D LRM40_02565 type II secretion system GspH family protein K02456 gspG; general secretion pathway protein G
D LRM40_02570 type II secretion system GspH family protein K02456 gspG; general secretion pathway protein G
D LRM40_02610 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D LRM40_14335 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D LRM40_14340 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D LRM40_14345 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D LRM40_14350 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D LRM40_14355 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D LRM40_14360 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D LRM40_14365 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D LRM40_02600 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LRM40_08885 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LRM40_14380 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LRM40_15325 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LRM40_15320 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LRM40_15550 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LRM40_10290 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LRM40_15380 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LRM40_15330 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LRM40_17865 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LRM40_04965 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LRM40_13960 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LRM40_13740 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LRM40_13955 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LRM40_04895 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D LRM40_04900 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D LRM40_04905 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D LRM40_08740 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D LRM40_17290 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D LRM40_13615 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D LRM40_13595 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D LRM40_05040 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D LRM40_13585 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D LRM40_13635 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D LRM40_14125 hypothetical protein K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:idc02020]
D LRM40_12255 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LRM40_12260 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D LRM40_06320 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D LRM40_12985 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D LRM40_07780 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LRM40_12285 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LRM40_10765 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D LRM40_10760 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D LRM40_19130 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LRM40_01635 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D LRM40_05460 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D LRM40_21160 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D LRM40_21090 efflux RND transporter periplasmic adaptor subunit K18321 smeA; membrane fusion protein, multidrug efflux system
D LRM40_21080 efflux transporter outer membrane subunit K18323 smeC; outer membrane protein, multidrug efflux system
D LRM40_01745 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D LRM40_01740 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D LRM40_01375 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LRM40_01380 winged helix-turn-helix domain-containing protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D LRM40_13170 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D LRM40_13175 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D LRM40_13085 flagellin FliC K02406 fliC; flagellin
D LRM40_13090 flagellin FliC K02406 fliC; flagellin
D LRM40_13095 flagellin FliC K02406 fliC; flagellin
D LRM40_02900 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LRM40_12960 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D LRM40_13180 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D LRM40_18685 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LRM40_03825 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LRM40_18680 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LRM40_18700 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D LRM40_18695 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D LRM40_18690 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D LRM40_03420 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D LRM40_09640 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D LRM40_13410 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D LRM40_13670 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LRM40_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LRM40_14440 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D LRM40_07880 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D LRM40_06935 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D LRM40_00555 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D LRM40_00560 ABC transporter permease K09696 natB; sodium transport system permease protein
D LRM40_18570 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D LRM40_18565 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D LRM40_12375 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D LRM40_18605 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_18600 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_18590 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_18400 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LRM40_13210 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LRM40_00950 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D LRM40_00955 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D LRM40_00960 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LRM40_00965 type II secretion system F family protein K12510 tadB; tight adherence protein B
D LRM40_00970 type II secretion system F family protein K12511 tadC; tight adherence protein C
D LRM40_09275 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D LRM40_11350 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D LRM40_11820 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D LRM40_01575 sigma 54-interacting transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D LRM40_11815 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D LRM40_07090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07240 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07550 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09615 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_16035 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D LRM40_16030 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D LRM40_03270 nifA; nif-specific transcriptional activator NifA K02584 nifA; Nif-specific regulatory protein
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_10785 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D LRM40_10790 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D LRM40_13935 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D LRM40_17700 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D LRM40_16900 pilin K02650 pilA; type IV pilus assembly protein PilA
D LRM40_01290 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D LRM40_01300 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D LRM40_20105 NADH:ubiquinone oxidoreductase K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D LRM40_04280 HupU protein K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D LRM40_20110 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D LRM40_04275 nickel-dependent hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D LRM40_04270 ATP-binding protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D LRM40_04285 sigma-54 dependent transcriptional regulator K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D LRM40_04375 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D LRM40_04370 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D LRM40_04360 cybH; Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D LRM40_07105 methyltransferase domain-containing protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LRM40_07580 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_13240 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_03135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_03160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_18625 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_14395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_09305 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_12620 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_19250 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_06770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LRM40_13250 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LRM40_20580 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_13230 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_13190 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LRM40_13225 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LRM40_07095 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LRM40_13805 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D LRM40_13810 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D LRM40_13800 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D LRM40_13820 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D LRM40_13815 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LRM40_16605 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D LRM40_00490 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D LRM40_14610 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D LRM40_00495 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D LRM40_00480 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D LRM40_00485 DctP family TRAP transporter solute-binding subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D LRM40_00475 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D LRM40_00470 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D LRM40_20130 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D LRM40_14605 response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D LRM40_20135 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D LRM40_04455 ATP-binding protein K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D LRM40_10110 ATP-binding protein K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D LRM40_04460 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D LRM40_10115 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D LRM40_04510 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D LRM40_04505 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D LRM40_04500 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D LRM40_04490 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_04495 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_10120 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_06755 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LRM40_16615 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LRM40_07225 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LRM40_04930 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LRM40_04935 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LRM40_04940 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LRM40_01045 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_09625 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_11435 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_15275 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_18970 c-type cytochrome K08738 CYC; cytochrome c
D LRM40_10550 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D LRM40_10545 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D LRM40_10540 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D LRM40_10535 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D LRM40_17050 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LRM40_17055 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LRM40_17060 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D LRM40_07445 TolC family protein K12340 tolC; outer membrane protein
D LRM40_08175 TolC family outer membrane protein K12340 tolC; outer membrane protein
D LRM40_10370 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D LRM40_12945 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:idc04148]
D LRM40_12795 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D LRM40_04930 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:idc02024]
D LRM40_11085 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LRM40_15655 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LRM40_15600 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LRM40_02770 glycosyltransferase K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D LRM40_00735 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LRM40_15940 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LRM40_01375 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LRM40_01380 winged helix-turn-helix domain-containing protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D LRM40_01290 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D LRM40_01300 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D LRM40_13170 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D LRM40_13175 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D LRM40_03825 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LRM40_18680 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LRM40_08250 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D LRM40_16160 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D LRM40_08240 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D LRM40_08245 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D LRM40_08255 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D LRM40_01050 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_09765 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_10080 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_10085 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_13270 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14915 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14920 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14970 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_06780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_10105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_14930 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_14980 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_06785 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_10100 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_14925 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_14975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_06790 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_10095 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_14935 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_14985 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_06795 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_10090 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_14950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_01015 M4 family metallopeptidase K20273 zmpA; zinc metalloprotease ZmpA
D LRM40_01020 M4 family metallopeptidase K20273 zmpA; zinc metalloprotease ZmpA
D LRM40_01275 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_02800 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_17675 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_06755 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LRM40_16615 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LRM40_06090 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LRM40_04790 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D LRM40_06990 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D LRM40_16555 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LRM40_16560 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LRM40_16565 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LRM40_16550 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LRM40_16545 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LRM40_16540 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LRM40_17865 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LRM40_16120 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D LRM40_16125 S8 family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D LRM40_15550 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LRM40_10290 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LRM40_15380 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LRM40_15330 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LRM40_04965 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LRM40_13960 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LRM40_13740 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LRM40_13955 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LRM40_19815 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_01085 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_09660 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:idc02030]
D LRM40_07580 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_13240 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_03135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_03160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_18625 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_14395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_09305 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_12620 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_19250 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_18235 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D LRM40_13265 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D LRM40_20580 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_13230 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_06770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LRM40_13250 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LRM40_13190 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LRM40_13225 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LRM40_05240 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D LRM40_13195 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D LRM40_07095 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LRM40_07100 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D LRM40_07105 methyltransferase domain-containing protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LRM40_13050 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LRM40_13020 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LRM40_13015 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LRM40_13180 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D LRM40_13185 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:idc02040]
D LRM40_13060 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D LRM40_13055 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LRM40_13050 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LRM40_13045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LRM40_13040 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LRM40_13035 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D LRM40_13030 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D LRM40_13025 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D LRM40_13020 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LRM40_13015 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LRM40_13010 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D LRM40_13005 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D LRM40_13000 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LRM40_12995 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D LRM40_12975 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D LRM40_12980 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D LRM40_12940 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D LRM40_12935 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D LRM40_12930 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D LRM40_12925 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D LRM40_12920 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D LRM40_12915 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D LRM40_12910 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D LRM40_05620 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D LRM40_12905 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D LRM40_12900 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D LRM40_12895 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D LRM40_12890 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D LRM40_12885 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D LRM40_13085 flagellin FliC K02406 fliC; flagellin
D LRM40_13090 flagellin FliC K02406 fliC; flagellin
D LRM40_13095 flagellin FliC K02406 fliC; flagellin
D LRM40_13080 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D LRM40_13075 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D LRM40_13070 flagellar protein FliT K02423 fliT; flagellar protein FliT
D LRM40_13180 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D LRM40_13185 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D LRM40_12945 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D LRM40_10855 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D LRM40_13170 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D LRM40_13175 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D LRM40_17700 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D LRM40_02900 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LRM40_12960 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D LRM40_11655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:idc04980]
D LRM40_00710 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D LRM40_07950 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D LRM40_07940 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D LRM40_02255 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LRM40_02265 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:idc01501]
D LRM40_07295 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LRM40_16580 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LRM40_05505 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LRM40_07930 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D LRM40_07925 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LRM40_04780 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_10140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_04785 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D LRM40_04790 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D LRM40_06990 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D LRM40_07445 TolC family protein K12340 tolC; outer membrane protein
D LRM40_08175 TolC family outer membrane protein K12340 tolC; outer membrane protein
D LRM40_03875 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LRM40_16460 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LRM40_16815 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LRM40_04690 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:idc01502]
D LRM40_04730 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LRM40_01445 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LRM40_04700 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LRM40_04705 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LRM40_04720 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:idc01503]
D LRM40_19130 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LRM40_11725 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LRM40_01635 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D LRM40_05460 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D LRM40_17715 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LRM40_10045 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LRM40_10465 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LRM40_04780 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_10140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_04785 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D LRM40_07445 TolC family protein K12340 tolC; outer membrane protein
D LRM40_08175 TolC family outer membrane protein K12340 tolC; outer membrane protein
D LRM40_10965 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LRM40_14440 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:idc01000]
C 01001 Protein kinases [BR:idc01001]
D LRM40_00725 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LRM40_01590 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LRM40_06065 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LRM40_12230 HDOD domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LRM40_13500 HDOD domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LRM40_17730 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LRM40_14200 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D LRM40_12255 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LRM40_10765 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D LRM40_01375 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LRM40_18685 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LRM40_03420 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D LRM40_09640 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D LRM40_01640 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LRM40_18820 sensor histidine kinase N-terminal domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LRM40_18570 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D LRM40_00310 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D LRM40_11820 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D LRM40_16035 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D LRM40_01290 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D LRM40_10785 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D LRM40_04270 ATP-binding protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D LRM40_20580 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_13230 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_13800 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D LRM40_00490 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D LRM40_14610 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D LRM40_20130 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D LRM40_21170 PAS domain S-box protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D LRM40_03575 PAS domain-containing protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D LRM40_08710 ATP-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D LRM40_18115 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:idc01009]
D LRM40_15010 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LRM40_14530 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D LRM40_07070 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D LRM40_11165 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D LRM40_16880 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D LRM40_10820 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:idc01002]
D LRM40_06245 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LRM40_14215 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LRM40_04350 HyaD/HybD family hydrogenase maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D LRM40_20115 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D LRM40_10660 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LRM40_09570 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D LRM40_00585 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D LRM40_08095 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LRM40_03930 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D LRM40_14830 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LRM40_04110 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D LRM40_21320 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D LRM40_19855 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D LRM40_07380 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LRM40_09190 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D LRM40_06295 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D LRM40_01015 M4 family metallopeptidase K20273 zmpA; zinc metalloprotease ZmpA
D LRM40_01020 M4 family metallopeptidase K20273 zmpA; zinc metalloprotease ZmpA
D LRM40_00505 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D LRM40_05025 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D LRM40_01340 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D LRM40_01345 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D LRM40_09775 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LRM40_08685 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LRM40_19060 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LRM40_13530 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D LRM40_09280 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LRM40_18725 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LRM40_12590 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D LRM40_12710 M20/M25/M40 family metallo-hydrolase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D LRM40_04830 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D LRM40_08850 hypothetical protein K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20]
D LRM40_08855 peptidase M35 K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20]
D LRM40_09315 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LRM40_12300 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LRM40_12455 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D LRM40_15285 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LRM40_16915 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D LRM40_10990 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D LRM40_10480 zinc-dependent peptidase K09933 mtfA; MtfA peptidase
D LRM40_01635 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D LRM40_05460 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D LRM40_04910 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D LRM40_16120 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D LRM40_16125 S8 family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D LRM40_03400 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D LRM40_06285 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D LRM40_02415 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LRM40_11290 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D LRM40_15125 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LRM40_11245 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LRM40_14590 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LRM40_05130 AAA family ATPase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LRM40_11235 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LRM40_14140 brxL; protease Lon-related BREX system protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LRM40_14400 AAA family ATPase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LRM40_12215 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D LRM40_05470 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LRM40_00455 proline iminopeptidase-family hydrolase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LRM40_10695 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LRM40_12780 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D LRM40_07470 S41 family peptidase K08676 tri; tricorn protease [EC:3.4.21.-]
D LRM40_05535 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D LRM40_07660 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D LRM40_10615 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LRM40_02920 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D LRM40_08615 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LRM40_07850 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D LRM40_09320 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D LRM40_18650 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D LRM40_18655 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D LRM40_11555 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D LRM40_00765 tldD; metalloprotease TldD K03568 tldD; TldD protein
D LRM40_17530 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D LRM40_11070 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D LRM40_11075 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:idc01003]
D LRM40_05745 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D LRM40_13875 transglycosylase domain-containing protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D LRM40_17525 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LRM40_03875 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LRM40_16460 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LRM40_02770 glycosyltransferase K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D LRM40_01310 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D LRM40_08840 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:idc01005]
D LRM40_10965 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LRM40_10960 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LRM40_04760 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LRM40_10975 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LRM40_10475 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LRM40_10590 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LRM40_14890 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LRM40_14895 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LRM40_07555 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D LRM40_13325 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D LRM40_08170 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LRM40_07800 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D LRM40_11650 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LRM40_10600 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LRM40_17790 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LRM40_17795 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LRM40_12165 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D LRM40_12180 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D LRM40_12125 glycosyltransferase family 9 protein K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D LRM40_00785 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LRM40_07370 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LRM40_12160 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LRM40_02960 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D LRM40_12170 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D LRM40_05310 glycosyltransferase K12991 rfbG; rhamnosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:idc01011]
D LRM40_04070 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LRM40_06270 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LRM40_04725 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LRM40_04710 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LRM40_04695 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LRM40_04730 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LRM40_01445 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LRM40_11205 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LRM40_10615 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D LRM40_04705 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LRM40_04720 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LRM40_06375 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LRM40_08195 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LRM40_12535 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LRM40_03875 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LRM40_16460 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LRM40_17525 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LRM40_16815 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LRM40_04690 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LRM40_02415 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LRM40_15125 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LRM40_11290 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D LRM40_13875 transglycosylase domain-containing protein K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D LRM40_21320 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D LRM40_05025 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D LRM40_15050 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LRM40_15730 MltA domain-containing protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D LRM40_11485 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D LRM40_09990 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D LRM40_09510 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D LRM40_11725 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LRM40_13930 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:idc01004]
D LRM40_05425 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LRM40_18025 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LRM40_05420 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LRM40_05440 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LRM40_05430 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_14700 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_17885 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_18540 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LRM40_10970 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LRM40_09705 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LRM40_16955 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LRM40_08950 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D LRM40_18560 thioesterase family protein K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D LRM40_04440 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D LRM40_06735 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LRM40_09095 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_09105 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_11440 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LRM40_07975 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D LRM40_01275 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_02800 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_17675 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_06445 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D LRM40_05415 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LRM40_07480 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LRM40_02965 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LRM40_13760 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:idc01008]
D LRM40_19980 SDR family oxidoreductase K14633 gra6; ketoreductase RED2 [EC:1.1.1.-]
C 01006 Prenyltransferases [BR:idc01006]
D LRM40_07210 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LRM40_21295 hypothetical protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D LRM40_14065 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LRM40_11005 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LRM40_11275 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D LRM40_11750 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LRM40_05875 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D LRM40_00890 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LRM40_13665 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LRM40_14645 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:idc01007]
D LRM40_08105 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LRM40_06480 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LRM40_08645 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D LRM40_01285 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LRM40_10460 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LRM40_17725 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LRM40_12650 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LRM40_06250 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LRM40_07690 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LRM40_16325 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LRM40_05250 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LRM40_05865 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LRM40_11105 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LRM40_02950 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LRM40_02955 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LRM40_07145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LRM40_14035 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LRM40_09025 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LRM40_08355 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LRM40_09045 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LRM40_09050 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LRM40_09945 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LRM40_01415 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_10380 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D LRM40_09800 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D LRM40_08700 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D LRM40_20440 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_04085 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LRM40_10175 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LRM40_05565 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LRM40_04525 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D LRM40_08260 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
D LRM40_12550 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LRM40_09580 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D LRM40_05555 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LRM40_16635 aspartate aminotransferase family protein K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64]
D LRM40_07235 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LRM40_13835 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LRM40_17325 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LRM40_02420 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LRM40_01530 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_10810 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LRM40_11730 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D LRM40_02320 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D LRM40_12090 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LRM40_05270 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:idc00194]
D LRM40_01950 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LRM40_17145 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LRM40_01945 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LRM40_17150 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LRM40_01940 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LRM40_17115 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LRM40_01935 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LRM40_17120 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LRM40_01930 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LRM40_01925 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LRM40_17125 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LRM40_01920 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LRM40_17130 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LRM40_01915 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LRM40_17135 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LRM40_01910 ATP synthase subunit I K02116 atpI; ATP synthase protein I
D LRM40_17140 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:idc03000]
D LRM40_08495 helix-turn-helix domain-containing protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D LRM40_08160 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LRM40_15765 GlxA family transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D LRM40_15040 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D LRM40_18170 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D LRM40_18285 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D LRM40_19085 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D LRM40_01010 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D LRM40_04145 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D LRM40_15830 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D LRM40_09795 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D LRM40_17275 CysB family HTH-type transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D LRM40_07930 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D LRM40_04450 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D LRM40_04530 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D LRM40_00285 LysR substrate-binding domain-containing protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D LRM40_01260 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D LRM40_17415 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D LRM40_03470 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D LRM40_05920 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D LRM40_07890 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D LRM40_19950 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LRM40_19965 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LRM40_20550 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LRM40_04770 TetR family transcriptional regulator C-terminal domain-containing protein K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D LRM40_04855 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D LRM40_04585 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D LRM40_20360 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D LRM40_18550 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D LRM40_00825 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_09865 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_14835 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_15745 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_19265 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_18795 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D LRM40_17110 MarR family winged helix-turn-helix transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D LRM40_06855 MarR family winged helix-turn-helix transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LRM40_19215 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LRM40_01795 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D LRM40_09395 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D LRM40_17610 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D LRM40_09745 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LRM40_16300 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LRM40_06755 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LRM40_16615 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LRM40_00595 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D LRM40_10515 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D LRM40_13470 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D LRM40_10365 Fe-S cluster assembly transcription factor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D LRM40_19185 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D LRM40_20200 helix-turn-helix domain-containing protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LRM40_04795 autorepressor SdpR family transcription factor K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D LRM40_10180 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D LRM40_03970 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D LRM40_05080 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D LRM40_16110 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LRM40_04815 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LRM40_06005 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D LRM40_07760 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D LRM40_09100 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D LRM40_10705 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D LRM40_15260 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D LRM40_19805 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D LRM40_18630 norR; nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D LRM40_03270 nifA; nif-specific transcriptional activator NifA K02584 nifA; Nif-specific regulatory protein
D LRM40_20205 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D LRM40_03185 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein
D LRM40_03800 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein
D LRM40_07415 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D LRM40_00830 L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LRM40_15220 4Fe-4S binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D LRM40_18875 metal/formaldehyde-sensitive transcriptional repressor K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D LRM40_08970 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D LRM40_00645 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LRM40_04215 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D LRM40_13775 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D LRM40_05190 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D LRM40_20545 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D LRM40_13785 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D LRM40_02930 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D LRM40_16515 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D LRM40_06135 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D LRM40_04675 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:idc03021]
D LRM40_15350 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LRM40_15520 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LRM40_15515 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LRM40_07050 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LRM40_10855 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D LRM40_20175 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LRM40_05445 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LRM40_11320 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LRM40_01565 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LRM40_13655 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D LRM40_17700 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D LRM40_02900 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LRM40_12960 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D LRM40_09695 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D LRM40_06075 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D LRM40_15545 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LRM40_04945 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D LRM40_04950 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D LRM40_05450 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D LRM40_05455 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D LRM40_02930 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D LRM40_16515 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D LRM40_12320 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D LRM40_07040 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D LRM40_12240 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:idc03019]
D LRM40_05515 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LRM40_06545 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D LRM40_05480 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LRM40_11040 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LRM40_16365 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D LRM40_12450 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LRM40_05390 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LRM40_12615 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LRM40_17000 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LRM40_11655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LRM40_10305 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LRM40_12240 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LRM40_10880 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LRM40_14130 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D LRM40_14245 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LRM40_11085 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LRM40_07770 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LRM40_08790 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LRM40_15005 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LRM40_12515 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D LRM40_14040 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LRM40_09860 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D LRM40_04200 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D LRM40_10830 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:idc03011]
D LRM40_12110 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LRM40_11025 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LRM40_15450 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LRM40_15355 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LRM40_15395 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LRM40_10935 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LRM40_15500 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LRM40_15410 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LRM40_14505 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LRM40_15485 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LRM40_15360 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LRM40_15505 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LRM40_15365 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LRM40_15415 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LRM40_10310 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LRM40_12490 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LRM40_15435 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LRM40_10925 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LRM40_15460 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LRM40_12540 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LRM40_11510 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LRM40_15535 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LRM40_15465 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LRM40_15480 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LRM40_15475 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LRM40_15420 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LRM40_15405 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LRM40_10920 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LRM40_15530 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LRM40_15540 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LRM40_15525 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LRM40_14510 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LRM40_15430 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LRM40_15385 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LRM40_15445 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LRM40_15345 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LRM40_15400 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LRM40_12475 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LRM40_09040 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LRM40_14060 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LRM40_15455 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LRM40_15470 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LRM40_15425 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LRM40_14055 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LRM40_06745 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LRM40_15440 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LRM40_15390 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LRM40_12245 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LRM40_05410 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LRM40_06740 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LRM40_17880 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LRM40_09035 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LRM40_15370 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LRM40_04150 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D LRM40_02715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LRM40_02740 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LRM40_02765 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LRM40_02695 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02720 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02745 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02710 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LRM40_02735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LRM40_02760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:idc03009]
D LRM40_05480 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LRM40_12450 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LRM40_05485 era; GTPase Era K03595 era; GTPase
D LRM40_14050 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D LRM40_02930 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D LRM40_16515 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D LRM40_09695 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D LRM40_06075 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D LRM40_15545 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LRM40_06260 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D LRM40_16375 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D LRM40_16045 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D LRM40_17685 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D LRM40_00615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LRM40_04680 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D LRM40_00775 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LRM40_05395 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LRM40_15015 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D LRM40_09345 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D LRM40_12305 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D LRM40_06530 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D LRM40_00125 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D LRM40_14845 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D LRM40_01120 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D LRM40_17695 THUMP domain-containing protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D LRM40_11125 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D LRM40_19470 RNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D LRM40_12355 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D LRM40_00345 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D LRM40_07585 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D LRM40_11135 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LRM40_05520 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D LRM40_11145 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LRM40_15115 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D LRM40_12485 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D LRM40_10715 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D LRM40_13900 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D LRM40_08680 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D LRM40_08395 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D LRM40_05515 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LRM40_06545 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D LRM40_13780 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D LRM40_20525 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D LRM40_06315 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LRM40_12460 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LRM40_11090 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D LRM40_19225 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D LRM40_11080 hflX; GTPase HflX K03665 hflX; GTPase
D LRM40_15135 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LRM40_07045 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LRM40_09685 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D LRM40_09700 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D LRM40_06310 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D LRM40_06525 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D LRM40_02380 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D LRM40_12310 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D LRM40_11560 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D LRM40_16285 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D LRM40_05205 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D LRM40_05405 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:idc03016]
D LRM40_16365 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D LRM40_15060 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D LRM40_08105 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LRM40_14035 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LRM40_06250 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LRM40_16325 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LRM40_12650 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LRM40_06480 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LRM40_17725 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LRM40_05250 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LRM40_05865 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LRM40_08355 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LRM40_09025 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LRM40_07145 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LRM40_10460 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LRM40_07690 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LRM40_11105 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LRM40_09045 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LRM40_09050 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LRM40_01285 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LRM40_14460 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LRM40_04890 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LRM40_08200 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LRM40_08055 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LRM40_09680 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D LRM40_03200 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_03315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_10360 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_14810 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_15135 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LRM40_11750 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LRM40_17830 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LRM40_00610 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LRM40_00875 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D LRM40_02240 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D LRM40_17875 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LRM40_04615 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D LRM40_07075 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D LRM40_13860 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D LRM40_10655 2'-5' RNA ligase family protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D LRM40_12605 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D LRM40_02950 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LRM40_02955 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LRM40_08645 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D LRM40_10620 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D LRM40_09655 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D LRM40_04820 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D LRM40_06335 tRNA-dihydrouridine synthase family protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D LRM40_13990 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D LRM40_11580 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D LRM40_12480 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LRM40_13730 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LRM40_10950 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D LRM40_06225 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D LRM40_00345 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D LRM40_07585 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D LRM40_17640 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LRM40_15090 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D LRM40_07680 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D LRM40_10350 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D LRM40_09515 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D LRM40_12435 mnmC; FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D LRM40_01040 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D LRM40_16065 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LRM40_15850 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LRM40_15855 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LRM40_08720 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LRM40_11715 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D LRM40_00870 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D LRM40_01060 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LRM40_10445 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LRM40_15120 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LRM40_10320 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LRM40_11720 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LRM40_06575 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D LRM40_11040 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LRM40_10305 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:idc03012]
D LRM40_09690 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LRM40_09030 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LRM40_08675 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D LRM40_11020 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D LRM40_15490 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LRM40_15560 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LRM40_15495 fusA; elongation factor G K02355 fusA; elongation factor G
D LRM40_11600 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D LRM40_14005 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D LRM40_11010 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D LRM40_14010 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LRM40_04140 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D LRM40_21175 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LRM40_15375 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LRM40_18885 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LRM40_12425 efp; elongation factor P K02356 efp; elongation factor P
D LRM40_07385 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D LRM40_00995 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D LRM40_01460 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:idc03110]
D LRM40_10485 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D LRM40_09905 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D LRM40_11240 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D LRM40_02915 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D LRM40_14530 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D LRM40_10880 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LRM40_14130 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D LRM40_03220 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D LRM40_10335 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D LRM40_01180 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D LRM40_14245 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LRM40_10885 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LRM40_14600 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D LRM40_10340 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D LRM40_11675 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D LRM40_10875 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D LRM40_08565 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D LRM40_10870 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D LRM40_14240 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D LRM40_01635 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D LRM40_05460 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D LRM40_09315 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LRM40_12300 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LRM40_01915 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LRM40_17135 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LRM40_13740 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LRM40_02365 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D LRM40_04315 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D LRM40_04310 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D LRM40_18960 molecular chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D LRM40_16120 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D LRM40_16125 S8 family peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D LRM40_10045 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LRM40_10465 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LRM40_10470 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D LRM40_12390 peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D LRM40_08635 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D LRM40_14475 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D LRM40_07135 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D LRM40_08390 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D LRM40_08965 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D LRM40_18585 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D LRM40_16380 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D LRM40_12235 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D LRM40_16570 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D LRM40_15150 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
D LRM40_13745 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D LRM40_14020 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D LRM40_17715 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LRM40_08450 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D LRM40_05215 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D LRM40_00865 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D LRM40_15340 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D LRM40_08890 dsbG; thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG
D LRM40_17635 thioredoxin fold domain-containing protein K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:idc04131]
D LRM40_11130 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LRM40_09825 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D LRM40_20160 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D LRM40_00245 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LRM40_16130 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LRM40_13755 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LRM40_15175 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LRM40_14530 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:idc03051]
D LRM40_14530 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:idc03032]
D LRM40_09975 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LRM40_21260 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LRM40_12400 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LRM40_09055 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LRM40_12115 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LRM40_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LRM40_10915 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LRM40_20870 ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D LRM40_10850 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LRM40_21055 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_17025 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_12200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LRM40_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LRM40_09770 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LRM40_16335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LRM40_09500 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LRM40_19865 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_11410 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_10005 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LRM40_10955 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LRM40_07740 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LRM40_08735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LRM40_12525 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D LRM40_12080 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LRM40_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LRM40_08440 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LRM40_08430 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LRM40_16100 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:idc03036]
D LRM40_05480 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LRM40_09085 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D LRM40_10845 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D LRM40_21260 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LRM40_12400 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LRM40_09055 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LRM40_12115 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LRM40_14600 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D LRM40_14595 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM
D LRM40_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LRM40_04815 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LRM40_11085 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D LRM40_04145 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D LRM40_15830 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D LRM40_00825 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_09865 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_14835 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_15745 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_19265 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LRM40_08725 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D LRM40_12680 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D LRM40_11140 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D LRM40_04740 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LRM40_11660 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D LRM40_04690 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LRM40_06760 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LRM40_04685 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D LRM40_04735 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D LRM40_04715 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LRM40_04745 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LRM40_11495 cell division protein ZapA K09888 zapA; cell division protein ZapA
D LRM40_14225 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD
D LRM40_11170 cell division protein ZapE K06916 zapE; cell division protein ZapE
D LRM40_11725 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LRM40_04780 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_10140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_06340 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D LRM40_06345 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D LRM40_06350 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D LRM40_04855 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D LRM40_16800 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LRM40_16805 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D LRM40_16810 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D LRM40_16820 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D LRM40_21225 AAA family ATPase K03496 parA; chromosome partitioning protein
D LRM40_00620 AAA family ATPase K03496 parA; chromosome partitioning protein
D LRM40_06380 ParA family protein K03496 parA; chromosome partitioning protein
D LRM40_12690 ParA family protein K03496 parA; chromosome partitioning protein
D LRM40_00645 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LRM40_08440 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LRM40_08430 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LRM40_00610 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LRM40_00615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LRM40_14875 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D LRM40_18920 site-specific integrase K03733 xerC; integrase/recombinase XerC
D LRM40_11705 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D LRM40_03845 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LRM40_14255 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:idc03400]
D LRM40_08155 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D LRM40_00100 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LRM40_13790 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LRM40_14670 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LRM40_15580 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LRM40_04190 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LRM40_10400 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LRM40_04870 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LRM40_08385 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LRM40_14680 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D LRM40_15110 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LRM40_10455 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LRM40_08160 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LRM40_12655 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LRM40_04180 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LRM40_11810 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LRM40_16750 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LRM40_16765 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LRM40_08825 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LRM40_08735 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LRM40_07740 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LRM40_14300 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D LRM40_16930 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D LRM40_10375 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D LRM40_12415 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D LRM40_07705 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LRM40_19380 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LRM40_15520 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LRM40_15515 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LRM40_15350 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LRM40_07050 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LRM40_10805 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LRM40_11630 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LRM40_11740 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D LRM40_07835 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D LRM40_10575 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LRM40_07205 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LRM40_12200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LRM40_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LRM40_09770 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LRM40_16335 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LRM40_09500 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LRM40_19865 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_11410 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LRM40_10005 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LRM40_21055 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_17025 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_09075 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D LRM40_09070 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D LRM40_09080 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LRM40_16845 recA; recombinase RecA K03553 recA; recombination protein RecA
D LRM40_02370 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LRM40_02350 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LRM40_04805 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LRM40_01975 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LRM40_10930 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D LRM40_01520 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D LRM40_01025 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LRM40_05150 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LRM40_05490 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LRM40_09995 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D LRM40_04205 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D LRM40_04970 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D LRM40_02485 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D LRM40_19440 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D LRM40_06500 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D LRM40_12080 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LRM40_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LRM40_21260 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LRM40_12400 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LRM40_04815 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LRM40_09055 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LRM40_12115 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LRM40_17000 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LRM40_09085 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D LRM40_10845 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D LRM40_06905 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LRM40_12215 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D LRM40_06820 imuA; translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA
D LRM40_06825 DNA polymerase Y family protein K14161 imuB; protein ImuB
D LRM40_06830 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D LRM40_16850 RecX family transcriptional regulator K03565 recX; regulatory protein
D LRM40_01980 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D LRM40_11155 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D LRM40_18155 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D LRM40_03105 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LRM40_13925 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LRM40_13920 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:idc03029]
D LRM40_04935 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LRM40_09690 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LRM40_09030 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LRM40_11020 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D LRM40_15490 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LRM40_15560 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LRM40_15495 fusA; elongation factor G K02355 fusA; elongation factor G
D LRM40_19825 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D LRM40_05485 era; GTPase Era K03595 era; GTPase
D LRM40_16325 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LRM40_05865 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LRM40_17725 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LRM40_16790 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LRM40_16785 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LRM40_16795 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LRM40_21055 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_17025 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LRM40_10985 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D LRM40_10880 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LRM40_14130 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D LRM40_10875 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D LRM40_14245 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LRM40_14240 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D LRM40_10885 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LRM40_03200 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_03315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_10360 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_14810 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_10340 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D LRM40_14020 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D LRM40_03845 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LRM40_13665 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LRM40_14645 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LRM40_13700 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LRM40_13670 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LRM40_17865 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LRM40_13680 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D LRM40_13660 SCO family protein K07152 SCO1; protein SCO1
D LRM40_14530 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:idc02000]
D LRM40_03115 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LRM40_08935 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D LRM40_08930 ATP-binding cassette domain-containing protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D LRM40_00585 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D LRM40_04445 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D LRM40_04560 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D LRM40_03150 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LRM40_13305 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D LRM40_16475 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D LRM40_02000 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D LRM40_17235 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D LRM40_17250 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D LRM40_17255 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D LRM40_17260 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D LRM40_03785 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D LRM40_03780 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D LRM40_03790 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D LRM40_01705 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D LRM40_01700 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D LRM40_01695 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D LRM40_03430 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D LRM40_03440 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D LRM40_03435 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D LRM40_02305 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D LRM40_02315 putative 2-aminoethylphosphonate ABC transporter permease subunit K02011 afuB; iron(III) transport system permease protein
D LRM40_02310 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D LRM40_05850 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D LRM40_09585 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D LRM40_09600 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D LRM40_09595 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D LRM40_09590 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D LRM40_08250 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D LRM40_16160 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D LRM40_08240 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D LRM40_08245 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D LRM40_08255 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D LRM40_00060 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D LRM40_04590 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D LRM40_08705 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D LRM40_13540 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D LRM40_15805 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D LRM40_18510 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D LRM40_04595 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LRM40_04600 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LRM40_13550 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LRM40_15815 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LRM40_18515 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LRM40_19485 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LRM40_04605 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LRM40_13545 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LRM40_15820 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LRM40_18520 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LRM40_19480 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LRM40_18235 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D LRM40_18230 malF; maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein
D LRM40_18225 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein
D LRM40_18240 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LRM40_05115 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LRM40_05100 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D LRM40_05105 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D LRM40_05110 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D LRM40_01225 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D LRM40_01240 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D LRM40_01235 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D LRM40_01250 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D LRM40_01245 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D LRM40_17405 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D LRM40_17400 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D LRM40_17395 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D LRM40_17410 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D LRM40_20350 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D LRM40_13355 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D LRM40_13415 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D LRM40_20345 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LRM40_13365 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LRM40_13425 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D LRM40_20340 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LRM40_13370 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LRM40_13420 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D LRM40_20330 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LRM40_13360 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LRM40_13430 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D LRM40_17970 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D LRM40_17965 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D LRM40_03950 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LRM40_08005 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LRM40_03945 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LRM40_08015 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LRM40_03940 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LRM40_08010 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LRM40_03960 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D LRM40_03965 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D LRM40_07780 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LRM40_12285 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LRM40_12280 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D LRM40_12275 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D LRM40_12270 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LRM40_04490 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_04495 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_10120 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D LRM40_04505 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein
D LRM40_04500 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D LRM40_04510 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D LRM40_15790 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D LRM40_15780 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein
D LRM40_15785 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein
D LRM40_15770 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D LRM40_01050 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_09765 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_10080 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_10085 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_13270 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14915 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14920 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_14970 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D LRM40_06780 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_10105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_14930 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_14980 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D LRM40_06785 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_10100 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_14925 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_14975 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D LRM40_06790 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_10095 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_14935 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_14985 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D LRM40_06795 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_10090 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_14950 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D LRM40_20010 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D LRM40_20015 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D LRM40_04995 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D LRM40_05000 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D LRM40_05005 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D LRM40_05010 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D LRM40_05015 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D LRM40_03580 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LRM40_11685 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LRM40_13390 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LRM40_15270 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LRM40_11690 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D LRM40_13395 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D LRM40_13400 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D LRM40_13405 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D LRM40_13265 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D LRM40_13275 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D LRM40_13280 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D LRM40_13285 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D LRM40_13290 dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D LRM40_16555 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LRM40_16560 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LRM40_16565 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LRM40_16550 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LRM40_16545 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LRM40_16540 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LRM40_20460 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LRM40_17935 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LRM40_19885 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D LRM40_19890 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D LRM40_09760 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D LRM40_09755 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D LRM40_09750 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D LRM40_02065 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D LRM40_02075 capsular biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D LRM40_02070 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D LRM40_09780 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D LRM40_09785 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D LRM40_17705 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LRM40_00560 ABC transporter permease K09696 natB; sodium transport system permease protein
D LRM40_00555 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D LRM40_07455 ATP-binding cassette domain-containing protein K25182 ybhF; drug efflux transport system ATP-binding protein
D LRM40_07450 efflux RND transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG
D LRM40_08860 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D LRM40_08865 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LRM40_04060 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LRM40_07465 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LRM40_15225 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LRM40_16435 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LRM40_01650 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LRM40_04055 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LRM40_14855 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LRM40_15230 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LRM40_16430 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LRM40_07600 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LRM40_08605 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LRM40_09725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LRM40_13260 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LRM40_17615 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LRM40_17620 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LRM40_07605 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LRM40_08610 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LRM40_08955 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LRM40_09730 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LRM40_17625 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LRM40_17560 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D LRM40_07185 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D LRM40_14615 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D LRM40_18610 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LRM40_18615 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D LRM40_01440 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D LRM40_17340 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D LRM40_07295 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LRM40_16580 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LRM40_10665 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D LRM40_04620 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LRM40_20375 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D LRM40_05955 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D LRM40_11765 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D LRM40_17495 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D LRM40_18780 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D LRM40_02690 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LRM40_02680 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D LRM40_03465 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D LRM40_03455 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D LRM40_02675 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D LRM40_16290 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D LRM40_01110 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D LRM40_02910 potassium channel family protein K10716 kch; voltage-gated potassium channel
D LRM40_03165 ion transporter K10716 kch; voltage-gated potassium channel
D LRM40_02035 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D LRM40_09535 ammonium transporter K03320 amt; ammonium transporter, Amt family
D LRM40_05655 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_13565 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_15045 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_16480 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_17245 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_18340 gstA; glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_19335 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LRM40_04945 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D LRM40_12350 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D LRM40_18300 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D LRM40_20035 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D LRM40_04925 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D LRM40_13180 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D LRM40_13185 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D LRM40_02845 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D LRM40_06205 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D LRM40_08290 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D LRM40_10580 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D LRM40_16315 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D LRM40_02840 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D LRM40_06195 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D LRM40_06200 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D LRM40_10585 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D LRM40_16320 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D LRM40_06055 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D LRM40_06050 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR
D LRM40_16280 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D LRM40_08795 transporter K16074 zntB; zinc transporter
D LRM40_18845 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D LRM40_07035 bestrophin K08994 yneE; ion channel-forming bestrophin family protein
D LRM40_14800 mercuric transport protein K08363 merT; mercuric ion transport protein
D LRM40_14805 merP; mercury resistance system periplasmic binding protein MerP K08364 merP; periplasmic mercuric ion binding protein
D LRM40_05975 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LRM40_05095 carbohydrate porin K02024 lamB; maltoporin
D LRM40_05050 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D LRM40_12075 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D LRM40_16340 porin family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D LRM40_16400 porin family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D LRM40_19405 outer membrane beta-barrel protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D LRM40_20100 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D LRM40_02885 catecholate siderophore receptor Fiu K16090 fiu; catecholate siderophore receptor
D LRM40_19875 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D LRM40_05585 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D LRM40_06305 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D LRM40_17835 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D LRM40_09130 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LRM40_13345 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LRM40_15800 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LRM40_18355 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LRM40_19190 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LRM40_07445 TolC family protein K12340 tolC; outer membrane protein
D LRM40_08175 TolC family outer membrane protein K12340 tolC; outer membrane protein
D LRM40_01495 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
D LRM40_04790 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D LRM40_06990 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D LRM40_07615 efflux transporter outer membrane subunit K18904 nodT; outer membrane protein, multidrug efflux system
D LRM40_21080 efflux transporter outer membrane subunit K18323 smeC; outer membrane protein, multidrug efflux system
D LRM40_10985 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D LRM40_11095 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D LRM40_08405 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D LRM40_11150 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D LRM40_16305 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D LRM40_12765 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA
D LRM40_12770 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D LRM40_17710 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D LRM40_17785 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D LRM40_16385 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D LRM40_16330 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D LRM40_02940 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D LRM40_10630 CidA/LrgA family protein K06518 cidA; holin-like protein
D LRM40_01740 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D LRM40_01490 efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump
D LRM40_04785 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D LRM40_19115 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D LRM40_01360 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D LRM40_19015 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D LRM40_04250 DMT family transporter K11939 rhtA; inner membrane transporter RhtA
D LRM40_06220 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D LRM40_15900 L-lactate permease K03303 lutP; lactate permease
D LRM40_17220 SLAC1 anion channel family protein K03304 tehA; tellurite resistance protein
D LRM40_21380 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D LRM40_07395 cation acetate symporter K14393 actP; cation/acetate symporter
D LRM40_11450 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D LRM40_06840 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D LRM40_12700 kefC; glutathione-regulated potassium-efflux system protein KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D LRM40_12695 NAD(P)H-dependent oxidoreductase K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D LRM40_17800 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter
D LRM40_06680 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D LRM40_16525 uracil-xanthine permease family protein K09016 rutG; putative pyrimidine permease RutG
D LRM40_02015 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D LRM40_06850 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D LRM40_14775 ClcB-like voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family
D LRM40_09355 chromate transporter K07240 chrA; chromate transporter
D LRM40_09360 chromate transporter K07240 chrA; chromate transporter
D LRM40_18790 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D LRM40_18385 nickel transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D LRM40_12660 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D LRM40_00480 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D LRM40_00485 DctP family TRAP transporter solute-binding subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D LRM40_00475 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D LRM40_00470 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D LRM40_20160 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D LRM40_20180 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D LRM40_12535 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LRM40_11710 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D LRM40_16090 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D LRM40_16225 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D LRM40_02020 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D LRM40_03830 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D LRM40_15835 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D LRM40_01505 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D LRM40_07645 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D LRM40_12330 leuE; leucine efflux protein LeuE K11250 leuE; leucine efflux protein
D LRM40_15200 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D LRM40_15195 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D LRM40_13410 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D LRM40_06845 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D LRM40_04715 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LRM40_09825 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D LRM40_19880 energy transducer TonB K03832 tonB; periplasmic protein TonB
D LRM40_02850 energy transducer TonB K03832 tonB; periplasmic protein TonB
D LRM40_06210 TonB family protein K03832 tonB; periplasmic protein TonB
D LRM40_13865 TonB C-terminal domain-containing protein K03832 tonB; periplasmic protein TonB
D LRM40_15665 energy transducer TonB K03832 tonB; periplasmic protein TonB
D LRM40_06565 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D LRM40_06045 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D LRM40_06560 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D LRM40_17995 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D LRM40_18000 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D LRM40_18605 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_18600 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_18590 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D LRM40_18950 molybdopterin-dependent oxidoreductase K17050 serA; selenate/chlorate reductase subunit alpha [EC:1.97.1.9 1.97.1.1]
D LRM40_18955 respiratory nitrate reductase subunit beta K17051 serB; selenate/chlorate reductase subunit beta [EC:1.97.1.9 1.97.1.1]
D LRM40_18965 chlorate reductase subunit gamma K17052 serC; selenate/chlorate reductase subunit gamma [EC:1.97.1.9 1.97.1.1]
D LRM40_11770 HlyD family efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D LRM40_01745 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D LRM40_00580 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D LRM40_01485 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D LRM40_11265 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D LRM40_04780 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_10140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_17155 efflux RND transporter periplasmic adaptor subunit K21137 triB; membrane fusion protein, multidrug efflux system
D LRM40_21090 efflux RND transporter periplasmic adaptor subunit K18321 smeA; membrane fusion protein, multidrug efflux system
D LRM40_13300 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D LRM40_11665 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D LRM40_01155 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D LRM40_01150 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D LRM40_08030 entericidin A/B family lipoprotein K16348 ecnB; entericidin B
D LRM40_13515 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:idc02044]
D LRM40_07445 TolC family protein K12340 tolC; outer membrane protein
D LRM40_08175 TolC family outer membrane protein K12340 tolC; outer membrane protein
D LRM40_00580 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D LRM40_00585 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D LRM40_00340 AAA family ATPase K02450 gspA; general secretion pathway protein A
D LRM40_19165 AAA family ATPase K02450 gspA; general secretion pathway protein A
D LRM40_19160 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B
D LRM40_02575 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D
D LRM40_14375 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D LRM40_02600 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LRM40_08885 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LRM40_14380 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LRM40_02605 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D LRM40_14385 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D LRM40_02565 type II secretion system GspH family protein K02456 gspG; general secretion pathway protein G
D LRM40_02570 type II secretion system GspH family protein K02456 gspG; general secretion pathway protein G
D LRM40_02610 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D LRM40_14335 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D LRM40_14340 prepilin-type N-terminal cleavage/methylation domain-containing protein K02457 gspH; general secretion pathway protein H
D LRM40_14345 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D LRM40_14350 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D LRM40_14355 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D LRM40_14360 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D LRM40_14365 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D LRM40_14370 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D LRM40_14215 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LRM40_16900 pilin K02650 pilA; type IV pilus assembly protein PilA
D LRM40_14205 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D LRM40_14210 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D LRM40_06130 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D LRM40_11120 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D LRM40_13820 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D LRM40_13815 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LRM40_13810 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D LRM40_13805 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D LRM40_03880 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D LRM40_03885 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D LRM40_03890 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D LRM40_03895 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D LRM40_03900 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D LRM40_00810 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D LRM40_00800 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D LRM40_08690 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D LRM40_03370 fimbrial assembly protein K02671 pilV; type IV pilus assembly protein PilV
D LRM40_06105 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D LRM40_03365 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D LRM40_06110 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D LRM40_06115 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D LRM40_03355 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D LRM40_06120 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D LRM40_09495 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D LRM40_03375 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D LRM40_06095 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D LRM40_06100 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D LRM40_08050 hypothetical protein K08086 fimV; pilus assembly protein FimV
D LRM40_00950 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D LRM40_00955 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D LRM40_00960 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D LRM40_00965 type II secretion system F family protein K12510 tadB; tight adherence protein B
D LRM40_00970 type II secretion system F family protein K12511 tadC; tight adherence protein C
D LRM40_12185 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D LRM40_08460 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D LRM40_12975 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D LRM40_12980 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D LRM40_13055 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LRM40_13045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LRM40_13040 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LRM40_13015 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LRM40_13010 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D LRM40_13005 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D LRM40_13000 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LRM40_12995 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D LRM40_05215 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D LRM40_05040 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D LRM40_13585 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D LRM40_13590 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D LRM40_13630 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D LRM40_13625 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D LRM40_13620 tssE; type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF
D LRM40_13610 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D LRM40_13605 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D LRM40_05055 tssA; type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA
D LRM40_13615 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D LRM40_08740 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D LRM40_17290 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D LRM40_13595 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D LRM40_13635 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D LRM40_14125 hypothetical protein K11907 vasG; type VI secretion system protein VasG
D LRM40_05045 tagF; type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM
D LRM40_04965 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LRM40_13740 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LRM40_15325 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LRM40_15550 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LRM40_15320 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LRM40_10290 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LRM40_15380 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LRM40_13955 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LRM40_13960 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LRM40_15330 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LRM40_17865 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LRM40_04895 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D LRM40_04900 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D LRM40_04905 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:idc02042]
D LRM40_09465 hypothetical protein K10954 zot; zona occludens toxin
D LRM40_05975 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LRM40_01205 hemolysin III family protein K11068 hlyIII; hemolysin III
D LRM40_19815 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_01085 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D LRM40_09660 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:idc02022]
D LRM40_12255 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LRM40_12260 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D LRM40_10765 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D LRM40_10760 ompR; two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D LRM40_19130 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LRM40_21160 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D LRM40_01375 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LRM40_01380 winged helix-turn-helix domain-containing protein K07666 qseB; two-component system, OmpR family, response regulator QseB
D LRM40_18685 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LRM40_03825 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LRM40_18680 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LRM40_03420 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D LRM40_09640 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D LRM40_01640 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LRM40_18820 sensor histidine kinase N-terminal domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D LRM40_01645 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LRM40_05085 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LRM40_14305 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LRM40_16210 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LRM40_16840 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LRM40_17195 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D LRM40_18825 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LRM40_09645 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LRM40_18570 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D LRM40_18565 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D LRM40_12375 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D LRM40_18400 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LRM40_13210 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LRM40_00310 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D LRM40_06935 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D LRM40_11820 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D LRM40_01575 sigma 54-interacting transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D LRM40_11815 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D LRM40_16035 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D LRM40_16030 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D LRM40_13935 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D LRM40_01290 ATP-binding protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D LRM40_01300 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D LRM40_10785 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D LRM40_10790 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D LRM40_04270 ATP-binding protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D LRM40_04285 sigma-54 dependent transcriptional regulator K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D LRM40_20580 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_13230 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_13190 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LRM40_13225 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LRM40_07095 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LRM40_13800 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D LRM40_13820 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D LRM40_13815 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LRM40_16605 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D LRM40_00490 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D LRM40_14610 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D LRM40_00495 response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D LRM40_20130 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D LRM40_14605 response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D LRM40_20135 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D LRM40_04455 ATP-binding protein K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D LRM40_10110 ATP-binding protein K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D LRM40_04460 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D LRM40_10115 sigma-54 dependent transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D LRM40_12870 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D LRM40_21170 PAS domain S-box protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D LRM40_03575 PAS domain-containing protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D LRM40_08710 ATP-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D LRM40_18115 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:idc02035]
D LRM40_20580 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_13230 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D LRM40_06770 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LRM40_13250 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D LRM40_07100 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D LRM40_07105 methyltransferase domain-containing protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D LRM40_07095 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D LRM40_13190 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LRM40_13225 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LRM40_05240 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D LRM40_13195 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D LRM40_07580 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_13240 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_03135 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_03160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_18625 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_14395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D LRM40_09305 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_12620 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_19250 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D LRM40_13045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LRM40_13040 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LRM40_13035 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D LRM40_13010 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D LRM40_13005 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D LRM40_13000 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LRM40_12995 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D LRM40_12975 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D LRM40_12980 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D LRM40_13050 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LRM40_13020 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LRM40_13015 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LRM40_13055 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LRM40_12900 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D LRM40_12940 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D LRM40_05620 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D LRM40_12905 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D LRM40_13025 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D LRM40_13060 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D LRM40_13030 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D LRM40_12935 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D LRM40_12930 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D LRM40_12925 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D LRM40_12915 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D LRM40_12910 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D LRM40_12895 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D LRM40_12920 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D LRM40_12890 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D LRM40_12885 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D LRM40_13085 flagellin FliC K02406 fliC; flagellin
D LRM40_13090 flagellin FliC K02406 fliC; flagellin
D LRM40_13095 flagellin FliC K02406 fliC; flagellin
D LRM40_13080 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D LRM40_13075 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D LRM40_13070 flagellar protein FliT K02423 fliT; flagellar protein FliT
D LRM40_13170 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D LRM40_13175 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D LRM40_02900 sigma-70 family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D LRM40_12960 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D LRM40_13180 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D LRM40_13185 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D LRM40_12945 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D LRM40_12970 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D LRM40_07115 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D LRM40_13820 response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D LRM40_13815 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LRM40_13810 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D LRM40_13805 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D LRM40_13800 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D LRM40_13935 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D LRM40_00810 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D LRM40_00800 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D LRM40_08690 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D LRM40_16900 pilin K02650 pilA; type IV pilus assembly protein PilA
D LRM40_14205 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D LRM40_14210 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D LRM40_14215 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LRM40_11120 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D LRM40_03900 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D LRM40_03895 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D LRM40_03890 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D LRM40_03885 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D LRM40_03880 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D LRM40_09495 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D LRM40_03370 fimbrial assembly protein K02671 pilV; type IV pilus assembly protein PilV
D LRM40_06105 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D LRM40_03365 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D LRM40_06110 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D LRM40_06115 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX
D LRM40_03355 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D LRM40_06120 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D LRM40_06130 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D LRM40_00950 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D LRM40_00955 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D LRM40_00960 tadA; Flp pilus assembly complex ATPase component TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:idc04812]
D LRM40_20220 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
D LRM40_16800 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LRM40_04745 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LRM40_04740 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LRM40_06340 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D LRM40_06345 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D LRM40_06350 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D LRM40_21225 AAA family ATPase K03496 parA; chromosome partitioning protein
D LRM40_00620 AAA family ATPase K03496 parA; chromosome partitioning protein
D LRM40_06380 ParA family protein K03496 parA; chromosome partitioning protein
D LRM40_12690 ParA family protein K03496 parA; chromosome partitioning protein
D LRM40_00645 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:idc04147]
D LRM40_14530 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D LRM40_11655 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LRM40_00245 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LRM40_16130 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LRM40_00240 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LRM40_15185 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LRM40_15175 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LRM40_10045 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LRM40_10465 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D LRM40_00075 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D LRM40_14245 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LRM40_10880 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LRM40_14130 Hsp70 family protein K04043 dnaK; molecular chaperone DnaK
D LRM40_03985 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LRM40_10670 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LRM40_15490 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LRM40_15560 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LRM40_04890 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LRM40_17560 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D LRM40_01275 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_02800 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_17675 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LRM40_02990 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LRM40_15010 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LRM40_10605 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LRM40_17805 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D LRM40_06925 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LRM40_01075 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LRM40_04545 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D LRM40_19390 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D LRM40_07375 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LRM40_05730 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D LRM40_18250 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D LRM40_01265 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LRM40_07090 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07240 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_07550 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09575 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_09615 glnT; type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LRM40_02390 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LRM40_19400 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LRM40_03605 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LRM40_09365 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LRM40_04810 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LRM40_12455 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D LRM40_09220 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_11175 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LRM40_03245 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D LRM40_11195 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D LRM40_00880 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D LRM40_03975 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LRM40_05075 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LRM40_10295 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LRM40_13755 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D LRM40_00105 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:idc02048]
D LRM40_02485 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D LRM40_19440 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
D LRM40_02480 cas2e; type I-E CRISPR-associated endoribonuclease Cas2e K09951 cas2; CRISPR-associated protein Cas2
D LRM40_19445 cas2; type I-E CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D LRM40_02515 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D LRM40_19410 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D LRM40_02510 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D LRM40_19415 casA; type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA
D LRM40_02505 type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D LRM40_19420 casB; type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D LRM40_02500 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D LRM40_19425 cas7e; type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D LRM40_02495 cas5e; type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D LRM40_19430 cas5e; type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D LRM40_02490 type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D LRM40_19435 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D LRM40_00035 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LRM40_05170 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LRM40_07355 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LRM40_00030 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LRM40_07340 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LRM40_00025 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LRM40_05165 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LRM40_07335 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LRM40_18470 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D LRM40_11880 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D LRM40_18465 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D LRM40_05145 restriction endonuclease K07448 mrr; restriction system protein
D LRM40_18450 Mrr restriction system protein K07448 mrr; restriction system protein
D LRM40_07870 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K19156 prlF; antitoxin PrlF
D LRM40_01400 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D LRM40_01405 type II toxin-antitoxin system Phd/YefM family antitoxin K18923 stbD; antitoxin StbD
D LRM40_14200 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D LRM40_11910 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D LRM40_11915 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D LRM40_04355 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D LRM40_04745 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LRM40_16800 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LRM40_08440 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LRM40_08430 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LRM40_08105 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LRM40_07915 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D LRM40_03200 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_03315 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_10360 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LRM40_14810 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:idc01504]
D LRM40_10665 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D LRM40_07925 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LRM40_14440 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D LRM40_04780 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_10140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LRM40_04785 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D LRM40_04790 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D LRM40_06990 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D LRM40_11265 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D LRM40_01795 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D LRM40_09395 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D LRM40_07445 TolC family protein K12340 tolC; outer membrane protein
D LRM40_08175 TolC family outer membrane protein K12340 tolC; outer membrane protein
D LRM40_01485 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D LRM40_01490 efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump
D LRM40_01495 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:idc03200]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:idc03100]
D LRM40_02705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_02730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_02755 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_08110 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_08125 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_06215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LRM40_06970 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_06975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_01735 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_12775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_09815 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LRM40_09120 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LRM40_09125 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LRM40_08120 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LRM40_08135 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LRM40_08145 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LRM40_11225 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LRM40_04160 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LRM40_08115 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LRM40_08130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LRM40_08140 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LRM40_08205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_11215 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_11220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_11230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_15570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LRM40_12385 tRNA-His K14226 tRNA-His; tRNA His
D LRM40_02700 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LRM40_02725 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LRM40_02750 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LRM40_07665 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_11045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_21365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_10285 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_11255 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_11210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LRM40_06580 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LRM40_06585 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LRM40_06685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LRM40_15335 tRNA-Met K14230 tRNA-Met; tRNA Met
D LRM40_13980 tRNA-Met K14230 tRNA-Met; tRNA Met
D LRM40_04245 tRNA-Ile K14230 tRNA-Met; tRNA Met
D LRM40_16015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LRM40_09855 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LRM40_14070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LRM40_09065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LRM40_09715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LRM40_05960 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LRM40_07155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LRM40_10435 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LRM40_07360 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LRM40_15565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LRM40_04955 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LRM40_15555 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LRM40_15575 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LRM40_11400 tRNA-Val K14237 tRNA-Val; tRNA Val
D LRM40_11405 tRNA-Val K14237 tRNA-Val; tRNA Val
D LRM40_10735 tRNA-Val K14237 tRNA-Val; tRNA Val
D LRM40_12395 tRNA-Val K14237 tRNA-Val; tRNA Val
D LRM40_11595 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D LRM40_02695 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02720 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02745 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LRM40_02710 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LRM40_02735 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LRM40_02760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LRM40_02715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LRM40_02740 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LRM40_02765 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LRM40_10015 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D LRM40_04615 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D LRM40_12060 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D LRM40_07565 SDR family NAD(P)-dependent oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D LRM40_18760 aldo/keto reductase K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432]
D LRM40_00175 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D LRM40_15750 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D LRM40_09300 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D LRM40_15245 pqqC; pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D LRM40_20270 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D LRM40_20275 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D LRM40_08530 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D LRM40_03250 FAD-binding protein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D LRM40_14690 NAD(P)-binding protein K18208 RNLS; renalase [EC:1.6.3.5]
D LRM40_00695 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D LRM40_10300 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D LRM40_00525 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D LRM40_03125 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D LRM40_20125 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D LRM40_08670 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D LRM40_06165 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D LRM40_08980 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D LRM40_14635 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D LRM40_14280 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D LRM40_17580 c-type cytochrome K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D LRM40_18360 di-heme enzyme K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D LRM40_18405 c-type cytochrome K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D LRM40_09955 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LRM40_13380 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LRM40_03120 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D LRM40_03650 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LRM40_04670 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LRM40_10420 Ni/Fe hydrogenase subunit alpha K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2]
D LRM40_10405 NAD(P)H-dependent oxidoreductase subunit E K18005 hoxF; [NiFe] hydrogenase diaphorase moiety large subunit [EC:1.12.1.2]
D LRM40_10410 2Fe-2S iron-sulfur cluster-binding protein K18006 hoxU; [NiFe] hydrogenase diaphorase moiety small subunit [EC:1.12.1.2]
D LRM40_10415 NADP oxidoreductase K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2]
D LRM40_00520 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D LRM40_08655 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D LRM40_14705 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D LRM40_18940 chlorite dismutase family protein K09162 cld; chlorite dismutase [EC:1.13.11.49]
D LRM40_02880 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D LRM40_19800 hmpA; NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D LRM40_14955 LLM class flavin-dependent oxidoreductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D LRM40_19785 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D LRM40_01775 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D LRM40_11280 hpnE; hydroxysqualene dehydroxylase HpnE K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D LRM40_07620 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D LRM40_20185 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D LRM40_20190 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D LRM40_15235 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D LRM40_20215 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D LRM40_16695 SDR family NAD(P)-dependent oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D LRM40_08185 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D LRM40_12365 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D LRM40_14725 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LRM40_14840 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LRM40_07840 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D LRM40_00915 hypothetical protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D LRM40_02945 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D LRM40_10345 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D LRM40_06460 N-acetyltransferase family protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D LRM40_11370 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D LRM40_11480 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D LRM40_11375 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D LRM40_03680 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D LRM40_18020 triphosphoribosyl-dephospho-CoA synthase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D LRM40_03795 modD; ModD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D LRM40_05985 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D LRM40_11415 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D LRM40_00860 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D LRM40_02860 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D LRM40_08350 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D LRM40_15215 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D LRM40_18420 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D LRM40_10945 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D LRM40_16255 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D LRM40_20605 alpha/beta hydrolase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D LRM40_18015 mdcG; malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D LRM40_08985 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D LRM40_02985 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D LRM40_16295 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D LRM40_02130 Stf0 sulfotransferase family protein K21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37]
D LRM40_01105 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D LRM40_06060 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LRM40_08545 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LRM40_07540 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D LRM40_07775 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D LRM40_19740 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D LRM40_00295 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D LRM40_08660 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D LRM40_12735 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D LRM40_00745 sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D LRM40_08870 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LRM40_09490 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LRM40_03675 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]
D LRM40_08940 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LRM40_15295 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LRM40_16245 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D LRM40_13495 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D LRM40_05400 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D LRM40_11470 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LRM40_00635 alpha/beta fold hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D LRM40_18005 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D LRM40_18010 mdcE; biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D LRM40_11035 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D LRM40_00195 hydroxypyruvate isomerase family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D LRM40_17950 methylmalonyl-CoA mutase family protein K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D LRM40_03140 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D LRM40_03145 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D LRM40_13845 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D LRM40_07750 hydantoinase B/oxoprolinase family protein K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6]
D LRM40_07745 hydantoinase/oxoprolinase family protein K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6]
D LRM40_07755 acetone carboxylase subunit gamma K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6]
D LRM40_07830 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D LRM40_10395 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D LRM40_10560 cation-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D LRM40_06555 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D LRM40_19150 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D LRM40_12840 cation-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D LRM40_16980 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D LRM40_11590 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D LRM40_09135 ferredoxin family protein K05524 fdxA; ferredoxin
D LRM40_03205 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D LRM40_10355 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D LRM40_03775 nitrogen fixation protein NifQ K15790 nifQ; nitrogen fixation protein NifQ
D LRM40_03755 nifX; nitrogen fixation protein NifX K02596 nifX; nitrogen fixation protein NifX
D LRM40_03320 nifT; putative nitrogen fixation protein NifT K02593 nifT; nitrogen fixation protein NifT
D LRM40_03300 nitrogen fixation protein NifZ K02597 nifZ; nitrogen fixation protein NifZ
D LRM40_03275 nifB; nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D LRM40_03750 nifN; nitrogenase iron-molybdenum cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D LRM40_03740 nifE; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D LRM40_03240 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D LRM40_11200 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D LRM40_03255 4Fe-4S dicluster domain-containing protein K03855 fixX; ferredoxin like protein
D LRM40_03235 nifW; nitrogenase stabilizing/protective protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
C 99983 Lipid metabolism
D LRM40_16670 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D LRM40_05125 VOC family protein K08234 yaeR; glyoxylase I family protein
D LRM40_00815 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D LRM40_12750 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D LRM40_12150 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D LRM40_12155 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D LRM40_06965 heme biosynthesis protein HemY K02498 hemY; HemY protein
D LRM40_05840 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D LRM40_06240 AarF/UbiB family protein K03688 ubiB; ubiquinone biosynthesis protein
D LRM40_05835 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D LRM40_18645 SCP2 sterol-binding domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D LRM40_09930 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D LRM40_18975 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D LRM40_03615 prolyl oligopeptidase family serine peptidase K03932 lpqC; polyhydroxybutyrate depolymerase
D LRM40_07805 alpha/beta fold hydrolase K03932 lpqC; polyhydroxybutyrate depolymerase
D LRM40_08595 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D LRM40_06040 DoxX family protein K15977 K15977; putative oxidoreductase
D LRM40_15995 DoxX family protein K15977 K15977; putative oxidoreductase
D LRM40_12645 ypfH; esterase K06999 K06999; phospholipase/carboxylesterase
D LRM40_07195 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D LRM40_10495 cold shock domain-containing protein K03704 cspA; cold shock protein
D LRM40_02040 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D LRM40_09000 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D LRM40_12625 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D LRM40_18165 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D LRM40_10490 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D LRM40_11250 tig; trigger factor K03545 tig; trigger factor
D LRM40_14285 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D LRM40_11610 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D LRM40_05645 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D LRM40_05640 urease accessory protein UreF K03188 ureF; urease accessory protein
D LRM40_05605 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D LRM40_13560 urease accessory protein UreD K03190 ureD; urease accessory protein
D LRM40_04365 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D LRM40_10690 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D LRM40_04300 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D LRM40_04295 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D LRM40_04290 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D LRM40_04305 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D LRM40_02045 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D LRM40_11635 proteasome-type protease K07395 K07395; putative proteasome-type protease
D LRM40_17430 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D LRM40_03855 OsmC family protein K07397 yhfA; putative redox protein
D LRM40_14265 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D LRM40_20265 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D LRM40_13460 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D LRM40_07130 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D LRM40_09180 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D LRM40_00780 YraN family protein K07460 yraN; putative endonuclease
D LRM40_15305 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D LRM40_06775 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D LRM40_11430 IS5 family transposase K07481 K07481; transposase, IS5 family
D LRM40_18945 ISL3-like element ISIde1 family transposase K07485 K07485; transposase
D LRM40_00415 IS110 family transposase K07486 K07486; transposase
D LRM40_07515 IS110 family transposase K07486 K07486; transposase
D LRM40_03925 transposase K07491 rayT; REP-associated tyrosine transposase
D LRM40_02450 transposase K07497 K07497; putative transposase
D LRM40_02530 Mu transposase C-terminal domain-containing protein K07497 K07497; putative transposase
D LRM40_02545 helix-turn-helix domain-containing protein K07497 K07497; putative transposase
D LRM40_19655 IS3 family transposase K07497 K07497; putative transposase
D LRM40_20570 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D LRM40_17185 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D LRM40_10000 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D LRM40_21085 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D LRM40_14425 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LRM40_12500 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D LRM40_08975 septation protein A K06190 ispZ; intracellular septation protein
D LRM40_18635 ytfE; iron-sulfur cluster repair protein YtfE K07322 ytfE; regulator of cell morphogenesis and NO signaling
D LRM40_00660 SpoVR family protein K06415 spoVR; stage V sporulation protein R
C 99993 Cell motility
C 99995 Signaling proteins
D LRM40_03170 ProQ/FinO family protein K03607 proQ; ProP effector
D LRM40_00320 carbon starvation protein A K06200 cstA; carbon starvation protein
D LRM40_09675 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D LRM40_19795 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D LRM40_02375 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D LRM40_09960 PhoH family protein K07175 phoH2; PhoH-like ATPase
D LRM40_00650 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D LRM40_06265 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D LRM40_06765 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D LRM40_04170 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D LRM40_03955 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D LRM40_04390 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D LRM40_10980 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D LRM40_12360 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D LRM40_02245 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D LRM40_08220 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D LRM40_15025 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D LRM40_16425 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D LRM40_07610 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D LRM40_08600 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D LRM40_09295 glycine zipper 2TM domain-containing protein K04062 osmB; osmotically inducible lipoprotein OsmB
D LRM40_11115 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D LRM40_12265 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D LRM40_05600 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D LRM40_01305 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D LRM40_15715 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D LRM40_03870 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D LRM40_10700 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D LRM40_18430 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D LRM40_18575 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D LRM40_18670 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D LRM40_04800 SdpI family protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D LRM40_08090 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D LRM40_18065 peptidoglycan-binding protein K03791 K03791; putative chitinase
D LRM40_08995 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D LRM40_20285 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein
D LRM40_19290 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein
D LRM40_15250 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D LRM40_15240 pqqD; pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D LRM40_00155 group II truncated hemoglobin K06886 glbN; hemoglobin
D LRM40_07120 group II truncated hemoglobin K06886 glbN; hemoglobin
D LRM40_09160 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D LRM40_12190 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D LRM40_14250 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D LRM40_16970 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D LRM40_03995 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D LRM40_04850 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D LRM40_03210 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D LRM40_14500 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D LRM40_10185 YihY family inner membrane protein K07058 K07058; membrane protein
D LRM40_06360 heme-binding protein K11477 glcG; glc operon protein GlcG
D LRM40_01965 LemA family protein K03744 lemA; LemA protein
D LRM40_16060 LemA family protein K03744 lemA; LemA protein
D LRM40_09310 SlyX family protein K03745 slyX; SlyX protein
D LRM40_15310 DUF494 domain-containing protein K03747 smg; Smg protein
D LRM40_08085 SPOR domain-containing protein K03749 dedD; DedD protein
D LRM40_11735 DedA family protein K03975 dedA; membrane-associated protein
D LRM40_16920 phage holin family protein K08972 K08972; putative membrane protein
D LRM40_18985 SHOCT domain-containing protein K08982 K08982; putative membrane protein
D LRM40_07560 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D LRM40_19990 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D LRM40_06230 hypothetical protein K09858 K09858; SEC-C motif domain protein
D LRM40_04335 hydrogenase expression/formation protein K03618 hyaF; hydrogenase-1 operon protein HyaF
D LRM40_04340 hydrogenase K03619 hyaE; hydrogenase-1 operon protein HyaE
D LRM40_09115 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D LRM40_21310 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D LRM40_09485 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D LRM40_01960 TPM domain-containing protein K06872 K06872; uncharacterized protein
D LRM40_03515 GPW/gp25 family protein K06903 W; Bacteriophage baseplate protein W
D LRM40_03570 phage tail sheath subtilisin-like domain-containing protein K06907 FI; Bacteriophage tail sheath protein
D LRM40_04865 ATP-binding protein K06923 K06923; uncharacterized protein
D LRM40_19665 DNA-binding protein K06934 K06934; uncharacterized protein
D LRM40_03030 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D LRM40_07190 DUF3717 domain-containing protein K06938 K06938; uncharacterized protein
D LRM40_00605 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D LRM40_12570 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D LRM40_15975 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D LRM40_13945 hypothetical protein K06950 K06950; uncharacterized protein
D LRM40_05940 hypothetical protein K06975 K06975; uncharacterized protein
D LRM40_06280 N-acetyltransferase K06975 K06975; uncharacterized protein
D LRM40_15775 M14 family metallopeptidase K06987 K06987; uncharacterized protein
D LRM40_18545 VOC family protein K06991 K06991; uncharacterized protein
D LRM40_15625 C39 family peptidase K06992 K06992; uncharacterized protein
D LRM40_14455 cupin domain-containing protein K06995 K06995; uncharacterized protein
D LRM40_18485 cupin domain-containing protein K06995 K06995; uncharacterized protein
D LRM40_01350 VOC family protein K06996 K06996; uncharacterized protein
D LRM40_07855 VOC family protein K06996 K06996; uncharacterized protein
D LRM40_13855 esterase K07000 K07000; uncharacterized protein
D LRM40_04630 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D LRM40_19340 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D LRM40_02410 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D LRM40_01720 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D LRM40_04555 hypothetical protein K07020 K07020; uncharacterized protein
D LRM40_09410 AAA family ATPase K07028 K07028; uncharacterized protein
D LRM40_05705 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein K07032 K07032; uncharacterized protein
D LRM40_01185 YecA family protein K07039 K07039; uncharacterized protein
D LRM40_08375 UPF0149 family protein K07039 K07039; uncharacterized protein
D LRM40_14550 UPF0149 family protein K07039 K07039; uncharacterized protein
D LRM40_06880 zinc metallopeptidase K07054 K07054; uncharacterized protein
D LRM40_21135 nucleotidyltransferase K07075 K07075; uncharacterized protein
D LRM40_00080 FAD-dependent oxidoreductase K07077 K07077; uncharacterized protein
D LRM40_10770 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D LRM40_20170 permease K07089 K07089; uncharacterized protein
D LRM40_00065 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LRM40_07285 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LRM40_11505 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LRM40_13465 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LRM40_17760 TSUP family transporter K07090 K07090; uncharacterized protein
D LRM40_19285 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D LRM40_16095 PhoX family protein K07093 K07093; uncharacterized protein
D LRM40_19755 metallophosphoesterase K07098 K07098; uncharacterized protein
D LRM40_11050 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D LRM40_04220 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D LRM40_04225 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D LRM40_06650 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D LRM40_07590 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D LRM40_07595 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D LRM40_08715 SET domain-containing protein K07117 K07117; uncharacterized protein
D LRM40_16105 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D LRM40_20095 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D LRM40_16690 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D LRM40_02430 sel1 repeat family protein K07126 K07126; uncharacterized protein
D LRM40_10020 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D LRM40_04195 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D LRM40_17870 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D LRM40_06630 DsrE family protein K09004 K09004; uncharacterized protein
D LRM40_00975 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D LRM40_00985 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D LRM40_10565 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D LRM40_11525 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D LRM40_02425 DUF493 family protein K09158 K09158; uncharacterized protein
D LRM40_07320 PH domain-containing protein K09167 K09167; uncharacterized protein
D LRM40_14720 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D LRM40_08960 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D LRM40_00655 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D LRM40_06900 YbaN family protein K09790 K09790; uncharacterized protein
D LRM40_10595 Trm112 family protein K09791 K09791; uncharacterized protein
D LRM40_10505 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D LRM40_10680 RnfH family protein K09801 K09801; uncharacterized protein
D LRM40_17825 VirK/YbjX family protein K09824 virK; uncharacterized protein
D LRM40_19095 DUF2309 domain-containing protein K09822 K09822; uncharacterized protein
D LRM40_08000 PqiC family protein K09857 K09857; uncharacterized protein
D LRM40_12640 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D LRM40_14230 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D LRM40_08540 YceH family protein K09915 K09915; uncharacterized protein
D LRM40_11360 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D LRM40_14880 DUF484 family protein K09921 K09921; uncharacterized protein
D LRM40_19760 YggL family protein K09923 K09923; uncharacterized protein
D LRM40_12085 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein
D LRM40_10525 nitrogen fixation protein FixH K09926 K09926; uncharacterized protein
D LRM40_06030 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D LRM40_11065 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D LRM40_02875 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D LRM40_06385 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D LRM40_09720 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D LRM40_19030 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D LRM40_07820 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D LRM40_15920 TraB/GumN family protein K09973 K09973; uncharacterized protein
D LRM40_05915 HutD family protein K09975 K09975; uncharacterized protein
D LRM40_08360 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D LRM40_12760 VWA domain-containing protein K09989 K09989; uncharacterized protein
D LRM40_12505 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024