+D GENES KO
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KEGG Orthology (KO) - Idiomarina sp. PL1-037
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:idp00010]
D U0358_03145 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D U0358_03785 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D U0358_11625 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D U0358_11370 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D U0358_05035 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D U0358_06805 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D U0358_11375 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D U0358_01315 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D U0358_06000 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D U0358_06790 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D U0358_07050 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D U0358_02405 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D U0358_02410 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_09100 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D U0358_05935 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D U0358_07660 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_10285 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D U0358_07810 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D U0358_01515 pckA; (GenBank) phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D U0358_07720 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:idp00020]
D U0358_07950 gltA; (GenBank) citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D U0358_07600 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D U0358_08070 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D U0358_02455 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D U0358_07630 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D U0358_05620 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D U0358_07925 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D U0358_07920 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_07910 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D U0358_07915 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D U0358_07935 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D U0358_07930 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D U0358_07945 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D U0358_07940 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D U0358_08725 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D U0358_05245 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D U0358_02480 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D U0358_01515 pckA; (GenBank) phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D U0358_02405 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D U0358_02410 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:idp00030]
D U0358_03145 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D U0358_11975 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D U0358_11385 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D U0358_10690 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D U0358_09635 deoC; (GenBank) deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D U0358_09625 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D U0358_07810 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D U0358_05285 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D U0358_11370 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D U0358_11625 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D U0358_03785 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:idp00040]
D U0358_02845 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D U0358_02900 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D U0358_04410 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D U0358_11975 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:idp00051]
D U0358_03785 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D U0358_11625 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D U0358_11370 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D U0358_05035 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:idp00052]
D U0358_02780 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D U0358_04410 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D U0358_07810 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D U0358_03785 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:idp00053]
D U0358_02845 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D U0358_02900 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D U0358_02840 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D U0358_02895 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:idp00500]
D U0358_04410 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D U0358_07720 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D U0358_07810 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D U0358_03145 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:idp00620]
D U0358_10285 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D U0358_02405 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D U0358_02410 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_05935 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D U0358_09100 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D U0358_07660 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D U0358_06790 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D U0358_08630 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D U0358_11760 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D U0358_11765 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D U0358_04790 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_00280 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D U0358_07635 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D U0358_08685 gloB; (GenBank) hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D U0358_03355 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D U0358_12710 malic enzyme-like NAD(P)-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D U0358_08875 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D U0358_08870 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D U0358_08880 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D U0358_02480 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D U0358_08725 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D U0358_05245 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D U0358_01515 pckA; (GenBank) phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D U0358_07050 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D U0358_03420 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:idp00630]
D U0358_03415 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D U0358_03420 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D U0358_02480 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D U0358_07950 gltA; (GenBank) citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D U0358_07600 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D U0358_08070 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D U0358_02455 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D U0358_10285 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_10505 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D U0358_08255 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D U0358_07205 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D U0358_12585 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D U0358_09580 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D U0358_10630 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D U0358_10640 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_10635 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:idp00640]
D U0358_10285 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D U0358_04570 acetate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D U0358_08590 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D U0358_08585 transketolase C-terminal domain-containing protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D U0358_08580 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_08630 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D U0358_11760 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D U0358_11765 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D U0358_04790 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D U0358_07915 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D U0358_07910 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D U0358_05575 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D U0358_07600 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D U0358_07130 bifunctional 2-methylcitrate dehydratase/aconitate hydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D U0358_07595 acnD; (GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D U0358_07590 prpF; (GenBank) 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D U0358_08070 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D U0358_02455 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D U0358_07605 prpB; (GenBank) methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D U0358_03415 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
C 00650 Butanoate metabolism [PATH:idp00650]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_04615 fabV; (GenBank) enoyl-ACP reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D U0358_08870 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D U0358_07935 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D U0358_07930 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D U0358_07945 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D U0358_07940 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D U0358_00650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_07510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_10210 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_05535 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D U0358_05530 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D U0358_00135 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D U0358_05940 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:idp00660]
D U0358_00135 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D U0358_07915 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D U0358_07910 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:idp00562]
D U0358_10465 suhB; (GenBank) inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D U0358_00765 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D U0358_05575 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D U0358_05035 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00566 Sulfoquinovose metabolism
D U0358_02480 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:idp00190]
D U0358_08640 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D U0358_07935 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D U0358_07930 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D U0358_07945 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D U0358_07940 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D U0358_02190 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D U0358_02195 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D U0358_02200 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D U0358_01410 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D U0358_01435 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D U0358_01445 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D U0358_01450 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D U0358_01440 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D U0358_01415 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D U0358_06955 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D U0358_06960 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D U0358_06965 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D U0358_06970 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D U0358_00520 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D U0358_08325 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D U0358_11075 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D U0358_00525 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D U0358_08320 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D U0358_11070 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D U0358_00220 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D U0358_00210 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D U0358_00215 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D U0358_00225 atpH; (GenBank) F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D U0358_00205 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D U0358_00240 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D U0358_00230 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D U0358_00235 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D U0358_11630 ppa; (GenBank) inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D U0358_10300 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:idp00710]
D U0358_11375 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D U0358_06805 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D U0358_11370 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D U0358_11625 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D U0358_11385 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D U0358_10690 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D U0358_11915 phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19]
D U0358_05035 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D U0358_11975 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D U0358_01515 pckA; (GenBank) phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D U0358_12710 malic enzyme-like NAD(P)-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D U0358_02480 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:idp00720]
D U0358_07050 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D U0358_02480 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D U0358_08725 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D U0358_05245 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D U0358_07935 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D U0358_07930 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D U0358_07945 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D U0358_07940 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D U0358_07910 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D U0358_07915 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_07630 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D U0358_08070 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D U0358_02455 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D U0358_08630 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D U0358_11760 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D U0358_11765 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D U0358_04790 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D U0358_04830 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D U0358_10285 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:idp00680]
D U0358_09100 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D U0358_09105 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D U0358_09580 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D U0358_08255 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D U0358_06000 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D U0358_02480 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D U0358_11370 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D U0358_11625 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D U0358_03785 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D U0358_10285 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D U0358_07050 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D U0358_01315 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D U0358_10695 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D U0358_07265 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D U0358_09600 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:idp00910]
D U0358_01040 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D U0358_06050 multicopper oxidase domain-containing protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D U0358_01050 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D U0358_06870 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D U0358_12045 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D U0358_12585 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D U0358_04510 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D U0358_04515 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D U0358_09075 can; (GenBank) carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:idp00920]
D U0358_01720 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D U0358_03170 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D U0358_11055 TIGR01244 family sulfur transferase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D U0358_09160 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D U0358_01490 glpE; (GenBank) thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D U0358_00470 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D U0358_10990 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D U0358_10315 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D U0358_10960 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D U0358_03360 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D U0358_10955 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D U0358_10065 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:idp00061]
D U0358_08630 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D U0358_11760 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D U0358_11765 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D U0358_04790 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D U0358_07165 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D U0358_07175 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D U0358_07180 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D U0358_09540 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D U0358_04765 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D U0358_05595 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D U0358_07170 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D U0358_06915 fabA; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D U0358_05755 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D U0358_04615 fabV; (GenBank) enoyl-ACP reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D U0358_09360 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:idp00071]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_00365 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_04925 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_07890 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D U0358_05345 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D U0358_08520 fadE; (GenBank) acyl-CoA dehydrogenase FadE K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D U0358_01015 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D U0358_09360 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D U0358_09100 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D U0358_05935 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:idp00074]
D U0358_05900 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D U0358_07165 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D U0358_07175 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:idp00561]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_07660 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D U0358_01465 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D U0358_07185 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D U0358_10095 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D U0358_10010 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D U0358_00840 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:idp00564]
D U0358_01330 gpsA; (GenBank) NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D U0358_01465 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D U0358_10095 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D U0358_10010 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D U0358_12815 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D U0358_12560 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D U0358_10985 glpQ; (GenBank) glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D U0358_11870 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D U0358_05725 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D U0358_03940 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D U0358_11865 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D U0358_06645 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D U0358_10870 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D U0358_07675 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D U0358_08420 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:idp00565]
D U0358_12815 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D U0358_12815 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D U0358_12815 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:idp00592]
D U0358_12815 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D U0358_00365 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_04925 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:idp01040]
D U0358_01540 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D U0358_09050 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D U0358_08075 tesB; (GenBank) acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:idp00230]
D U0358_10030 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D U0358_01715 nudE; (GenBank) ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D U0358_09625 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D U0358_07810 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D U0358_05285 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D U0358_04810 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D U0358_11795 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D U0358_08510 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D U0358_03320 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D U0358_08505 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D U0358_00495 ATP-grasp domain-containing protein K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D U0358_00490 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D U0358_07745 purC; (GenBank) phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D U0358_07030 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D U0358_11785 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D U0358_09475 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D U0358_08535 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D U0358_06120 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D U0358_01005 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D U0358_03930 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D U0358_03245 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D U0358_10440 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D U0358_10145 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D U0358_05490 gpt; (GenBank) xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D U0358_03250 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D U0358_12265 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D U0358_07290 nrdB; (GenBank) class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D U0358_01060 nrdD; (GenBank) anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D U0358_06160 anti-phage deoxyguanosine triphosphatase K01129 dgt; dGTPase [EC:3.1.5.1]
D U0358_12965 anti-phage deoxyguanosine triphosphatase K01129 dgt; dGTPase [EC:3.1.5.1]
D U0358_12255 spoT; (GenBank) bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D U0358_10295 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D U0358_12175 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D U0358_05910 relA; (GenBank) GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D U0358_01785 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D U0358_01910 adenosine deaminase family protein K01488 add; adenosine deaminase [EC:3.5.4.4]
D U0358_05635 ppnN; (GenBank) nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D U0358_09450 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D U0358_05915 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D U0358_11485 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
C 00240 Pyrimidine metabolism [PATH:idp00240]
D U0358_04995 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D U0358_04990 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D U0358_08045 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D U0358_11535 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D U0358_01920 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D U0358_06875 pyrD; (GenBank) quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D U0358_12535 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D U0358_07225 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D U0358_05710 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D U0358_10440 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D U0358_05915 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D U0358_02030 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D U0358_05995 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D U0358_07250 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D U0358_08085 udk; (GenBank) uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D U0358_08535 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D U0358_06120 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D U0358_05635 ppnN; (GenBank) nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D U0358_01060 nrdD; (GenBank) anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D U0358_06320 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D U0358_07290 nrdB; (GenBank) class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D U0358_07150 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D U0358_01340 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D U0358_09630 deoA; (GenBank) thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D U0358_01915 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D U0358_02645 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D U0358_00075 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:idp00250]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D U0358_05845 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D U0358_07120 ansA; (GenBank) asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D U0358_07310 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D U0358_06410 asnA; (GenBank) aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D U0358_08040 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D U0358_06560 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D U0358_03450 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D U0358_03455 argH; (GenBank) argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D U0358_01785 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D U0358_07030 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D U0358_08045 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D U0358_11535 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D U0358_00650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_07510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_10210 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_04510 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D U0358_04515 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D U0358_06870 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D U0358_12045 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D U0358_10055 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D U0358_12585 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D U0358_04995 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D U0358_04990 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D U0358_01885 glsA; (GenBank) glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D U0358_00195 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D U0358_04810 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:idp00260]
D U0358_07655 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D U0358_12720 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D U0358_04775 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D U0358_01235 ltaE; (GenBank) low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D U0358_09580 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D U0358_08255 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D U0358_01315 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D U0358_10695 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D U0358_07265 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D U0358_09600 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D U0358_01500 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D U0358_01495 tdh; (GenBank) L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D U0358_10630 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D U0358_10640 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_10635 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D U0358_03940 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D U0358_09125 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D U0358_09130 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D U0358_01240 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D U0358_01245 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D U0358_08740 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D U0358_01260 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D U0358_09165 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D U0358_08995 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D U0358_08990 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:idp00270]
D U0358_00470 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D U0358_10990 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D U0358_01245 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D U0358_01240 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D U0358_11390 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D U0358_03930 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D U0358_06235 aminotransferase class V-fold PLP-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D U0358_06830 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D U0358_02540 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D U0358_07655 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D U0358_12720 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D U0358_04775 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D U0358_10315 alpha/beta fold hydrolase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D U0358_10960 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D U0358_03360 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D U0358_10320 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D U0358_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D U0358_08855 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D U0358_09165 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D U0358_02480 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D U0358_08740 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D U0358_10695 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D U0358_07265 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:idp00280]
D U0358_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D U0358_07040 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D U0358_08590 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D U0358_08585 transketolase C-terminal domain-containing protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D U0358_08580 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_07890 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D U0358_05555 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_00365 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_04925 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_05590 mmsB; (GenBank) 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D U0358_05575 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_05540 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D U0358_05550 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D U0358_05545 enoyl-CoA hydratase-related protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D U0358_05535 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D U0358_05530 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:idp00290]
D U0358_01260 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D U0358_00135 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D U0358_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D U0358_07040 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:idp00300]
D U0358_07655 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D U0358_12720 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D U0358_04775 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D U0358_07755 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D U0358_04985 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D U0358_05685 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D U0358_11945 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D U0358_07730 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D U0358_13130 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D U0358_13135 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D U0358_02270 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D U0358_02275 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:idp00310]
D U0358_07920 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_01015 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_09165 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D U0358_00650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_07510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_10210 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_07045 FAD-binding and (Fe-S)-binding domain-containing protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:idp00220]
D U0358_03445 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D U0358_03450 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D U0358_03455 argH; (GenBank) argininosuccinate lyase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D U0358_01885 glsA; (GenBank) glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D U0358_12585 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D U0358_04995 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D U0358_04990 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D U0358_06870 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D U0358_12045 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D U0358_03440 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D U0358_03435 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D U0358_11945 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D U0358_03430 argE; (GenBank) acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:idp00330]
D U0358_03775 speA; (GenBank) biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D U0358_03780 speB; (GenBank) agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D U0358_08925 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D U0358_10245 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D U0358_10250 nspC; (GenBank) carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_10105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D U0358_11940 astA; (GenBank) arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D U0358_04815 astB; (GenBank) N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D U0358_11935 astD; (GenBank) succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D U0358_08595 astE; (GenBank) succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D U0358_10125 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D U0358_10055 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D U0358_10175 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D U0358_10180 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:idp00340]
D U0358_09395 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D U0358_09430 hisIE; (GenBank) bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D U0358_09420 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D U0358_09415 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D U0358_09425 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D U0358_09410 hisB; (GenBank) bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D U0358_07260 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_09405 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_09400 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D U0358_00860 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D U0358_12645 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D U0358_12650 hutU; (GenBank) urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D U0358_12660 hutI; (GenBank) imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D U0358_12665 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_08855 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
C 00350 Tyrosine metabolism [PATH:idp00350]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D U0358_07260 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_09405 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_06255 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D U0358_06260 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D U0358_06270 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D U0358_06265 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D U0358_09100 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D U0358_05935 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D U0358_00650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_07510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_10210 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:idp00360]
D U0358_06240 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D U0358_07260 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_09405 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_06255 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D U0358_00795 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D U0358_07560 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D U0358_10105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:idp00380]
D U0358_11110 kynU; (GenBank) kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D U0358_07920 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_01015 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_10105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D U0358_10505 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D U0358_00795 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D U0358_07560 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:idp00400]
D U0358_07065 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D U0358_12755 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D U0358_11755 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D U0358_00435 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D U0358_12750 aroK; (GenBank) shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D U0358_07255 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D U0358_05460 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D U0358_08970 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D U0358_08975 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D U0358_08980 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D U0358_08985 trpCF; (GenBank) bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D U0358_08995 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D U0358_08990 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D U0358_08805 tyrA; (GenBank) bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D U0358_00505 prephenate dehydratase domain-containing protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D U0358_07260 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_09405 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_06240 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:idp00410]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_11590 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D U0358_00075 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_05575 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:idp00430]
D U0358_06170 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D U0358_06285 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D U0358_06560 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D U0358_06870 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:idp00450]
D U0358_03360 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D U0358_01245 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D U0358_06235 aminotransferase class V-fold PLP-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D U0358_00895 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D U0358_06555 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D U0358_06400 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D U0358_06310 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:idp00460]
D U0358_06170 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D U0358_06285 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D U0358_07120 ansA; (GenBank) asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D U0358_07310 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D U0358_06410 asnA; (GenBank) aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D U0358_09580 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:idp00470]
D U0358_00515 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D U0358_02305 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D U0358_09165 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D U0358_01885 glsA; (GenBank) glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D U0358_03350 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D U0358_02285 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D U0358_13130 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D U0358_13135 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:idp00480]
D U0358_06170 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D U0358_06285 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D U0358_11025 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D U0358_07860 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D U0358_08855 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
D U0358_11400 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D U0358_00530 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D U0358_04700 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D U0358_09990 pepA; (GenBank) leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D U0358_11555 pepB; (GenBank) aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D U0358_06860 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D U0358_12000 gorA; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D U0358_07630 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D U0358_12780 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:idp00520]
D U0358_11505 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D U0358_07720 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D U0358_07280 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D U0358_11455 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D U0358_11450 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D U0358_00200 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D U0358_02155 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D U0358_10270 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D U0358_05355 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D U0358_05030 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D U0358_00195 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D U0358_03145 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D U0358_02840 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D U0358_02895 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D U0358_07810 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D U0358_04410 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D U0358_02845 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D U0358_02900 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D U0358_02780 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
C 00541 Biosynthesis of various nucleotide sugars [PATH:idp00541]
D U0358_00200 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D U0358_03140 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D U0358_02830 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D U0358_02115 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D U0358_05330 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D U0358_02110 kdsC; (GenBank) 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D U0358_07960 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D U0358_02710 neuC; (GenBank) UDP-N-acetylglucosamine 2-epimerase K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D U0358_02705 neuB; (GenBank) N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D U0358_02220 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D U0358_04410 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D U0358_02845 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D U0358_02900 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:idp00540]
D U0358_05760 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D U0358_02325 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D U0358_05750 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D U0358_04715 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D U0358_05765 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D U0358_07970 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D U0358_10185 3-deoxy-D-manno-octulosonic acid kinase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D U0358_10040 lpxL; (GenBank) LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D U0358_06740 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:idp00550]
D U0358_02155 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D U0358_10270 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D U0358_02300 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D U0358_02285 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D U0358_02270 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D U0358_02305 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D U0358_02275 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D U0358_05720 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D U0358_07650 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D U0358_09235 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D U0358_02280 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D U0358_02295 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D U0358_12725 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D U0358_11545 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D U0358_02290 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D U0358_05135 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D U0358_05140 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D U0358_02265 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D U0358_05120 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:idp00552]
D U0358_07650 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D U0358_09235 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D U0358_00840 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D U0358_03140 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:idp00543]
D U0358_00470 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:idp00730]
D U0358_06035 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D U0358_06030 thiE; (GenBank) thiamine phosphate synthase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D U0358_06025 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D U0358_04660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_10450 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_10840 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D U0358_06010 thiH; (GenBank) 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D U0358_10865 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D U0358_06015 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D U0358_10875 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D U0358_08375 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_08380 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_10305 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_09450 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:idp00740]
D U0358_09565 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D U0358_09570 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D U0358_13115 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D U0358_10885 ribE; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D U0358_07480 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D U0358_04235 ribF; (GenBank) bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D U0358_12150 fre; (GenBank) NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D U0358_10030 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D U0358_11615 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:idp00750]
D U0358_03795 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D U0358_11380 epd; (GenBank) erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D U0358_04770 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D U0358_07265 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D U0358_11470 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D U0358_05895 pdxJ; (GenBank) pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:idp00760]
D U0358_05845 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D U0358_04505 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D U0358_02385 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D U0358_00770 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D U0358_01005 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D U0358_08535 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D U0358_06120 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D U0358_05155 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D U0358_05915 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D U0358_11890 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D U0358_03910 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D U0358_06150 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D U0358_00775 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D U0358_04955 nadK; (GenBank) NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D U0358_01710 sthA; (GenBank) Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D U0358_00650 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_07510 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D U0358_10210 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:idp00770]
D U0358_00135 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D U0358_11585 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D U0358_09560 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D U0358_11590 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D U0358_10260 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D U0358_01345 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D U0358_05915 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D U0358_01505 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D U0358_02360 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D U0358_05900 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D U0358_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D U0358_00075 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D U0358_11595 panP; (GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:idp00780]
D U0358_07080 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D U0358_04765 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D U0358_05595 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D U0358_07170 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D U0358_05755 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D U0358_01380 bioH; (GenBank) pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D U0358_07085 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D U0358_07095 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D U0358_07075 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D U0358_07090 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D U0358_10265 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:idp00785]
D U0358_05110 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D U0358_05105 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D U0358_01620 biotin/lipoate A/B protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_02405 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D U0358_02410 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D U0358_07925 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D U0358_07920 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D U0358_08590 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D U0358_08585 transketolase C-terminal domain-containing protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D U0358_08580 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D U0358_10630 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D U0358_10640 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D U0358_10635 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:idp00790]
D U0358_02560 folE2; (GenBank) GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D U0358_08375 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_08380 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_10305 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_09140 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D U0358_10110 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D U0358_11095 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D U0358_10090 folB; (GenBank) dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D U0358_08060 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D U0358_10085 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D U0358_11580 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D U0358_05025 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D U0358_02505 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D U0358_04795 folC; (GenBank) bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D U0358_09565 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D U0358_11960 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D U0358_08730 pabB; (GenBank) aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D U0358_07160 pabC; (GenBank) aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D U0358_08065 SDR family NAD(P)-dependent oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D U0358_06245 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D U0358_06240 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D U0358_05365 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D U0358_05360 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D U0358_05650 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:idp00670]
D U0358_02505 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D U0358_08065 SDR family NAD(P)-dependent oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D U0358_04830 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D U0358_09580 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D U0358_08510 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D U0358_11785 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D U0358_10640 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D U0358_02645 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D U0358_10685 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D U0358_11390 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D U0358_02540 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D U0358_10630 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_10635 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D U0358_09125 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D U0358_09130 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D U0358_01240 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D U0358_01245 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:idp00860]
D U0358_09080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D U0358_05300 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D U0358_11540 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D U0358_12180 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D U0358_13145 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D U0358_13150 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D U0358_11885 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D U0358_00430 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D U0358_01070 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D U0358_11530 hemJ; (GenBank) protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D U0358_12085 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D U0358_13155 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D U0358_01410 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D U0358_01415 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D U0358_02550 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D U0358_00830 DUF2470 domain-containing protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D U0358_04550 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D U0358_04555 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:idp00130]
D U0358_01475 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D U0358_01470 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D U0358_12155 ubiD; (GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D U0358_11615 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D U0358_10650 FAD-dependent oxidoreductase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D U0358_01080 peptidase U32 family protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D U0358_01085 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D U0358_01075 SCP2 sterol-binding domain-containing protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT
D U0358_07275 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D U0358_10655 ubiH; (GenBank) 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D U0358_12220 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D U0358_05210 FAD-dependent monooxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D U0358_07785 flavodoxin domain-containing protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D U0358_06255 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:idp00900]
D U0358_10865 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D U0358_05730 ispC; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D U0358_06105 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D U0358_05290 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D U0358_06110 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D U0358_10420 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D U0358_04255 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_11615 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D U0358_10860 farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D U0358_02485 ispB; (GenBank) octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D U0358_05720 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:idp00907]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_05535 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D U0358_00365 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_04925 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D U0358_11385 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:idp00332]
D U0358_10175 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D U0358_10180 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:idp00261]
D U0358_07655 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D U0358_12720 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D U0358_04775 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D U0358_07755 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D U0358_04985 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:idp00521]
D U0358_07810 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D U0358_10465 suhB; (GenBank) inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:idp00401]
D U0358_08805 tyrA; (GenBank) bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D U0358_07260 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_09405 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D U0358_08970 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D U0358_08975 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D U0358_07175 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D U0358_05595 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D U0358_07170 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00975 Biosynthesis of various siderophores
C 00998 Biosynthesis of various antibiotics
D U0358_07165 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:idp00999]
D U0358_11390 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D U0358_00435 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:idp00362]
D U0358_00365 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_04925 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_05480 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_08870 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D U0358_01015 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:idp00627]
D U0358_10105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D U0358_11615 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:idp00625]
D U0358_05935 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D U0358_09100 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D U0358_10215 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D U0358_08275 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D U0358_08275 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D U0358_00365 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_04925 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:idp00643]
D U0358_06260 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D U0358_06270 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D U0358_06265 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D U0358_10105 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:idp00930]
D U0358_00370 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D U0358_04930 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:idp00626]
D U0358_05935 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D U0358_09100 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:idp00984]
D U0358_00365 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D U0358_04925 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:idp03020]
D U0358_01850 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D U0358_01855 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D U0358_09705 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D U0358_12260 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:idp03010]
D U0358_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_03960 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_09675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_11680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_03965 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_09670 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_11675 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_07245 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D U0358_05700 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D U0358_09835 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D U0358_09710 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D U0358_09745 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D U0358_09940 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D U0358_01865 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D U0358_09760 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D U0358_02185 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D U0358_09870 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D U0358_09715 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D U0358_01860 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D U0358_09720 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D U0358_09765 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D U0358_05080 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D U0358_08830 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D U0358_09820 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D U0358_09930 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D U0358_09845 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D U0358_04215 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D U0358_11325 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D U0358_01835 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D U0358_09850 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D U0358_09865 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D U0358_09860 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D U0358_09770 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D U0358_09755 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D U0358_09925 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D U0358_01840 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D U0358_01830 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D U0358_01845 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D U0358_02180 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D U0358_09780 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D U0358_09735 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D U0358_09830 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D U0358_09700 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D U0358_09750 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D U0358_08815 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D U0358_07450 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D U0358_02490 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D U0358_09840 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D U0358_09855 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D U0358_09775 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D U0358_05280 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D U0358_02495 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D U0358_01355 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D U0358_09825 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D U0358_09740 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D U0358_12705 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D U0358_07190 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D U0358_01360 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D U0358_00315 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D U0358_07455 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D U0358_09725 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:idp00970]
D U0358_00015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_03955 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_09070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_09680 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_11685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_00545 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_04095 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_04845 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_08885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_08890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_09220 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D U0358_09225 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D U0358_08650 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D U0358_08655 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D U0358_06655 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D U0358_05220 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D U0358_05225 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D U0358_09055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D U0358_09060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D U0358_09065 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D U0358_01800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D U0358_06650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D U0358_11840 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D U0358_11845 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D U0358_04850 tRNA-His K14226 tRNA-His; tRNA His
D U0358_00020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D U0358_03950 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D U0358_09685 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D U0358_11690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D U0358_05045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_05215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_05230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_06660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_09970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_04495 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D U0358_04500 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D U0358_05050 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_05235 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_06885 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_11300 tRNA-Ile K14230 tRNA-Met; tRNA Met
D U0358_03770 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D U0358_04840 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D U0358_04855 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D U0358_06510 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D U0358_04545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D U0358_06620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D U0358_08895 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D U0358_01790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D U0358_01805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D U0358_01815 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D U0358_09650 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D U0358_01795 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D U0358_05790 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D U0358_07495 tRNA-Val K14237 tRNA-Val; tRNA Val
D U0358_09085 tRNA-Val K14237 tRNA-Val; tRNA Val
D U0358_09090 tRNA-Val K14237 tRNA-Val; tRNA Val
D U0358_09080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D U0358_07845 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D U0358_08905 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D U0358_04435 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D U0358_07105 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D U0358_00345 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D U0358_00340 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D U0358_07465 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D U0358_06590 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D U0358_04705 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D U0358_06310 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D U0358_00400 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D U0358_10000 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D U0358_05170 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D U0358_04240 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D U0358_05820 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D U0358_12695 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D U0358_05495 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D U0358_10415 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D U0358_07445 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D U0358_07440 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D U0358_11495 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D U0358_11970 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:idp03008]
D U0358_05880 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D U0358_11855 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:idp03060]
D U0358_09730 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D U0358_01820 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D U0358_05040 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D U0358_10915 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D U0358_10910 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D U0358_10920 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D U0358_00300 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D U0358_02340 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D U0358_01325 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D U0358_08835 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D U0358_09530 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D U0358_01280 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D U0358_06370 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D U0358_12205 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D U0358_12200 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D U0358_12195 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D U0358_05875 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D U0358_09305 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D U0358_03555 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D U0358_03670 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D U0358_04245 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D U0358_09455 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:idp04122]
D U0358_04660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_10450 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_00360 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D U0358_06600 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D U0358_06605 DsrE family protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D U0358_06610 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D U0358_06595 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D U0358_07020 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D U0358_10840 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D U0358_06020 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D U0358_06025 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:idp03018]
D U0358_02625 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D U0358_07215 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D U0358_12170 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D U0358_06000 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D U0358_05085 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D U0358_07900 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D U0358_08135 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D U0358_09955 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D U0358_10205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D U0358_13090 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D U0358_12160 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D U0358_03785 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D U0358_04965 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D U0358_11735 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D U0358_01765 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D U0358_10300 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D U0358_11575 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:idp03030]
D U0358_03985 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_07575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_08665 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_08635 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D U0358_09470 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D U0358_07145 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D U0358_05160 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D U0358_09995 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D U0358_00325 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D U0358_09910 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D U0358_11320 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D U0358_01905 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D U0358_08670 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D U0358_08545 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D U0358_00440 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D U0358_08700 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:idp03410]
D U0358_09270 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D U0358_02720 ung; (GenBank) uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D U0358_10165 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D U0358_01375 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D U0358_06630 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D U0358_00350 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D U0358_07710 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D U0358_00440 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D U0358_05810 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D U0358_08700 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:idp03420]
D U0358_08010 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D U0358_01895 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D U0358_09205 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D U0358_06640 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D U0358_13110 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D U0358_00440 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D U0358_08700 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:idp03430]
D U0358_06145 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D U0358_01755 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D U0358_02620 mutH; (GenBank) DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D U0358_13110 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D U0358_07320 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D U0358_10310 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D U0358_10855 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D U0358_05810 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D U0358_01905 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D U0358_08635 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D U0358_00325 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D U0358_09470 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D U0358_05160 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D U0358_07145 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D U0358_03985 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_07575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_08665 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_09995 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D U0358_08700 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D U0358_12765 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:idp03440]
D U0358_05810 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D U0358_01905 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D U0358_00330 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D U0358_05890 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D U0358_09460 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D U0358_06155 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D U0358_00440 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D U0358_04450 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D U0358_04455 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D U0358_04445 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D U0358_12225 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D U0358_13005 recB; (GenBank) exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D U0358_13010 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D U0358_13000 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D U0358_08635 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D U0358_00325 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D U0358_09470 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D U0358_05160 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D U0358_07145 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D U0358_03985 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_07575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_08665 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_09995 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D U0358_12700 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D U0358_09935 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
D U0358_09515 primosomal replication protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:idp03250]
D U0358_09550 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
D U0358_04735 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D U0358_11995 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:idp02010]
D U0358_04590 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D U0358_04585 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D U0358_04580 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D U0358_02140 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D U0358_02135 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D U0358_08365 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D U0358_02130 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D U0358_08355 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D U0358_02145 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D U0358_02125 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D U0358_08360 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D U0358_10720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D U0358_10715 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D U0358_10710 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D U0358_10705 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D U0358_06200 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D U0358_06195 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D U0358_06190 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D U0358_06185 oligopeptide/dipeptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D U0358_06180 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D U0358_02525 ABC transporter permease K09696 natB; sodium transport system permease protein
D U0358_02520 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D U0358_07990 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D U0358_08000 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D U0358_07995 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D U0358_04365 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D U0358_04360 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D U0358_04355 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D U0358_04350 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D U0358_10515 ATP-binding cassette domain-containing protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D U0358_09985 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D U0358_09980 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D U0358_02095 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D U0358_01290 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D U0358_01285 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D U0358_07975 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D U0358_13055 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D U0358_03215 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D U0358_11060 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D U0358_11065 ATP-binding cassette domain-containing protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:idp02060]
D U0358_07720 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D U0358_02630 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D U0358_02070 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D U0358_02080 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:idp03070]
D U0358_10035 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D U0358_10380 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D U0358_10385 gspC; (GenBank) type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D U0358_10370 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D U0358_10365 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D U0358_10360 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D U0358_10355 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D U0358_10350 gspJ; (GenBank) type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D U0358_10345 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D U0358_10340 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D U0358_10335 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D U0358_10375 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D U0358_10915 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D U0358_10910 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D U0358_01820 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D U0358_05040 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D U0358_09730 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D U0358_10920 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D U0358_00300 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D U0358_02340 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D U0358_01280 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D U0358_01325 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D U0358_08835 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D U0358_12205 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D U0358_12200 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D U0358_12195 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:idp02020]
D U0358_10725 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D U0358_10730 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D U0358_08375 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_08380 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_10305 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_09140 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D U0358_10110 phosphodiesterase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D U0358_11095 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D U0358_10720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D U0358_01705 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D U0358_01700 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D U0358_12565 HAMP domain-containing sensor histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D U0358_12570 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D U0358_02165 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D U0358_02430 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D U0358_02435 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D U0358_04190 flagellin K02406 fliC; flagellin
D U0358_04295 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D U0358_10850 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D U0358_00715 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D U0358_00710 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D U0358_08500 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D U0358_00735 kdpA; (GenBank) potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D U0358_00730 kdpB; (GenBank) potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D U0358_00725 kdpC; (GenBank) potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D U0358_02570 arcA; (GenBank) two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D U0358_01415 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D U0358_00320 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D U0358_03355 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D U0358_02520 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D U0358_02525 ABC transporter permease K09696 natB; sodium transport system permease protein
D U0358_01045 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D U0358_01035 narL; (GenBank) two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D U0358_05510 rcsF; (GenBank) Rcs stress response system protein RcsF K06080 rcsF; RcsF protein
D U0358_06635 LuxR C-terminal-related transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D U0358_08900 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D U0358_01675 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D U0358_01680 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D U0358_05370 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA
D U0358_05395 SAF domain-containing protein K02279 cpaB; pilus assembly protein CpaB
D U0358_05400 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D U0358_05405 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D U0358_05410 type II secretion system F family protein K12510 tadB; tight adherence protein B
D U0358_05415 type II secretion system F family protein K12511 tadC; tight adherence protein C
D U0358_05690 glnD; (GenBank) [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D U0358_03915 glnB; (GenBank) nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D U0358_12580 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D U0358_12575 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D U0358_12585 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_02090 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D U0358_04130 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D U0358_00695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_01130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_01650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_03425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_03540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_04540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06450 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_08130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_08555 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_09110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_09620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_11360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_11490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_00475 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D U0358_13060 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D U0358_04325 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D U0358_04330 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D U0358_04310 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D U0358_04300 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_08775 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_09480 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_04315 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D U0358_04125 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D U0358_03820 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D U0358_03825 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D U0358_03830 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D U0358_01885 glsA; (GenBank) glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D U0358_00970 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D U0358_00965 response regulator K15012 regA; two-component system, response regulator RegA
D U0358_02190 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D U0358_02195 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D U0358_02200 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D U0358_06955 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D U0358_06960 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D U0358_06965 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D U0358_06970 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D U0358_00520 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D U0358_08325 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D U0358_11075 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D U0358_00525 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D U0358_08320 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D U0358_11070 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D U0358_10035 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D U0358_03120 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D U0358_08765 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D U0358_08770 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D U0358_04115 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecule (CAM) interaction
C 04517 IgSF CAM signaling
C 04518 Integrin signaling
C 04519 Cadherin signaling
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagocytosis
D U0358_08375 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_08380 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_10305 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
C 04142 Lysosome biogenesis
C 04146 Peroxisome [PATH:idp04146]
D U0358_09360 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D U0358_11890 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D U0358_07630 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D U0358_05535 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D U0358_10505 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D U0358_09295 Fe-Mn family superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04149 Peroxisome - yeast
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D U0358_02190 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
C 04156 Integrated stress response (ISR) signaling pathway [PATH:idp04156]
D U0358_09455 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D U0358_05050 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_05235 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_06885 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_11300 tRNA-Ile K14230 tRNA-Met; tRNA Met
D U0358_04965 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D U0358_11735 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D U0358_11025 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:idp02024]
D U0358_01765 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D U0358_08970 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D U0358_08975 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D U0358_07065 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D U0358_00710 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D U0358_08500 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D U0358_09360 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D U0358_09890 zur; (GenBank) zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D U0358_09570 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D U0358_00300 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D U0358_12960 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D U0358_01820 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D U0358_05040 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D U0358_09730 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D U0358_10920 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D U0358_02340 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D U0358_01280 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D U0358_01325 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D U0358_08835 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:idp02030]
D U0358_00695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_01130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_01650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_03425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_03540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_04540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06450 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_08130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_08555 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_09110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_09620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_11360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_11490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_00475 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D U0358_13060 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D U0358_04310 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D U0358_04325 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D U0358_04330 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D U0358_04300 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_08775 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_09480 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_04305 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D U0358_09905 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D U0358_04315 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D U0358_04125 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D U0358_04130 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D U0358_03845 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D U0358_03875 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D U0358_03880 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D U0358_10850 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D U0358_10845 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:idp02040]
D U0358_03835 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D U0358_03840 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D U0358_03845 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D U0358_03850 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D U0358_03855 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D U0358_03860 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D U0358_03865 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D U0358_01480 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D U0358_03870 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D U0358_03875 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D U0358_03880 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D U0358_03885 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D U0358_03890 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D U0358_03895 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D U0358_03900 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D U0358_04280 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D U0358_03905 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D U0358_04120 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D U0358_04135 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D U0358_04140 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D U0358_04145 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D U0358_04150 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D U0358_04155 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D U0358_04160 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D U0358_04165 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D U0358_04170 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D U0358_04175 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D U0358_04180 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D U0358_04185 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D U0358_04105 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP
D U0358_10255 tetratricopeptide repeat protein K21217 motX; sodium-type polar flagellar protein MotX
D U0358_09275 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D U0358_04190 flagellin K02406 fliC; flagellin
D U0358_04200 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D U0358_04205 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D U0358_10850 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D U0358_10845 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D U0358_04115 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D U0358_04110 flgN; (GenBank) flagellar export chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D U0358_11315 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D U0358_03820 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D U0358_02090 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D U0358_03830 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D U0358_04295 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D U0358_06000 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagosome formation
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:idp04981]
D U0358_10685 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D U0358_02505 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D U0358_09580 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D U0358_02645 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D U0358_00860 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D U0358_12645 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:idp01501]
D U0358_09555 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D U0358_05355 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D U0358_03370 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06360 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06940 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_11880 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_03375 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_06355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_06945 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_11875 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_10035 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D U0358_12725 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D U0358_05140 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D U0358_02265 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:idp01502]
D U0358_02305 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D U0358_00515 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D U0358_02275 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D U0358_02280 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D U0358_02295 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:idp01503]
D U0358_06200 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D U0358_06195 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D U0358_06190 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D U0358_06185 oligopeptide/dipeptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D U0358_06180 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D U0358_12565 HAMP domain-containing sensor histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D U0358_12570 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D U0358_01750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D U0358_02165 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D U0358_00060 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D U0358_09550 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D U0358_03370 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06360 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06940 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_11880 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_03375 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_06355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_06945 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_11875 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_10035 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D U0358_05760 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:idp01000]
C 01001 Protein kinases [BR:idp01001]
D U0358_02665 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_02755 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_02990 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_02995 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_03060 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_03260 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_03330 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_03405 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_10595 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_10725 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D U0358_01705 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D U0358_12565 HAMP domain-containing sensor histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D U0358_00715 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D U0358_01045 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D U0358_01675 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D U0358_12580 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D U0358_04310 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D U0358_03825 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D U0358_00970 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:idp01009]
D U0358_02540 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D U0358_03785 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D U0358_09455 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D U0358_09600 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:idp01002]
D U0358_03555 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D U0358_03670 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D U0358_04245 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D U0358_02365 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D U0358_03250 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D U0358_04535 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D U0358_04810 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D U0358_04510 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D U0358_00195 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D U0358_08040 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D U0358_06860 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D U0358_11990 prlC; (GenBank) oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D U0358_08645 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D U0358_02420 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D U0358_12040 insulinase family protein K01407 ptrA; protease III [EC:3.4.24.55]
D U0358_08090 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D U0358_00530 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D U0358_04700 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D U0358_09990 pepA; (GenBank) leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D U0358_11555 pepB; (GenBank) aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D U0358_09875 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D U0358_07730 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D U0358_05695 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D U0358_00380 pepQ; (GenBank) Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D U0358_11510 pepQ; (GenBank) Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D U0358_10660 pepP; (GenBank) Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D U0358_05020 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D U0358_07070 htpX; (GenBank) protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D U0358_07770 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D U0358_05735 rseP; (GenBank) sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D U0358_01595 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D U0358_09315 M90 family metallopeptidase K09933 mtfA; MtfA peptidase
D U0358_02165 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D U0358_02160 trypsin-like peptidase domain-containing protein K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D U0358_12960 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D U0358_00865 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D U0358_10240 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D U0358_04735 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D U0358_11995 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D U0358_00655 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D U0358_05120 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D U0358_04870 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D U0358_04880 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D U0358_01460 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D U0358_05875 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D U0358_09305 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D U0358_05350 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D U0358_06845 prc; (GenBank) carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D U0358_00585 S41 family peptidase K08676 tri; tricorn protease [EC:3.4.21.-]
D U0358_07115 sppA; (GenBank) signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D U0358_04680 sohB; (GenBank) protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D U0358_01485 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D U0358_02955 rrtA; (GenBank) rhombosortase K28165 rrtA; rhombosortase
D U0358_06280 rrtA; (GenBank) rhombosortase K28165 rrtA; rhombosortase
D U0358_12685 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D U0358_07310 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D U0358_06170 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D U0358_06285 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D U0358_01030 yegQ; (GenBank) tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D U0358_01085 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D U0358_01080 peptidase U32 family protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D U0358_02060 pmbA; (GenBank) metalloprotease PmbA K03592 pmbA; PmbA protein
D U0358_02050 tldD; (GenBank) metalloprotease TldD K03568 tldD; TldD protein
D U0358_01780 hflC; (GenBank) protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D U0358_01775 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:idp01003]
D U0358_00840 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D U0358_11545 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D U0358_12725 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D U0358_02290 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D U0358_05135 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:idp01005]
D U0358_05760 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D U0358_05765 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D U0358_02325 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D U0358_05750 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D U0358_04715 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D U0358_07970 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D U0358_10040 lpxL; (GenBank) LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D U0358_10185 3-deoxy-D-manno-octulosonic acid kinase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D U0358_06740 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D U0358_05330 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D U0358_07960 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D U0358_02110 kdsC; (GenBank) 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D U0358_02115 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D U0358_02220 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:idp01011]
D U0358_02155 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D U0358_10270 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D U0358_02300 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D U0358_02285 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D U0358_02270 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D U0358_02305 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D U0358_00515 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D U0358_03350 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D U0358_02280 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D U0358_02295 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D U0358_07650 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D U0358_09235 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D U0358_04230 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D U0358_12725 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D U0358_11545 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D U0358_05140 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D U0358_02265 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D U0358_05120 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D U0358_02290 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D U0358_05135 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D U0358_01595 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D U0358_00375 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D U0358_05130 mltB; (GenBank) lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D U0358_09345 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D U0358_01110 murein transglycosylase domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D U0358_08690 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D U0358_03300 mltF; (GenBank) membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D U0358_07155 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D U0358_05125 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D U0358_09030 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D U0358_01750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D U0358_02390 ampD; (GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:idp01004]
D U0358_07175 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D U0358_07180 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D U0358_09540 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D U0358_04765 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D U0358_05595 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D U0358_07170 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D U0358_06915 fabA; (GenBank) 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D U0358_05755 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D U0358_04615 fabV; (GenBank) enoyl-ACP reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D U0358_09050 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D U0358_08075 tesB; (GenBank) acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.20]
D U0358_13095 thioesterase family protein K01073 yigI; acyl-CoA thioesterase [EC:3.1.2.-]
D U0358_01540 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D U0358_10285 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D U0358_04570 acetate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D U0358_05530 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D U0358_09360 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D U0358_09300 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D U0358_01465 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D U0358_07185 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D U0358_10095 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D U0358_10010 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:idp01008]
C 01006 Prenyltransferases [BR:idp01006]
D U0358_10860 farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D U0358_02485 ispB; (GenBank) octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D U0358_05720 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D U0358_01760 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D U0358_01470 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D U0358_01410 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:idp01007]
D U0358_09080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D U0358_07845 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D U0358_11570 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D U0358_11495 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D U0358_11970 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D U0358_04705 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D U0358_12695 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D U0358_06310 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D U0358_04240 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D U0358_10000 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D U0358_05170 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D U0358_05820 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D U0358_04435 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D U0358_07105 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D U0358_10415 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D U0358_00345 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D U0358_00340 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D U0358_06590 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D U0358_05495 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D U0358_07465 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D U0358_08905 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D U0358_07445 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D U0358_07440 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D U0358_09215 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D U0358_07260 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_09405 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D U0358_01500 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D U0358_07085 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D U0358_11945 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D U0358_07095 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D U0358_11540 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D U0358_08180 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D U0358_07265 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:idp00194]
D U0358_00205 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D U0358_00210 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D U0358_00215 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D U0358_00220 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D U0358_00225 atpH; (GenBank) F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D U0358_00230 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D U0358_00235 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D U0358_00240 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D U0358_00245 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:idp03000]
D U0358_00640 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D U0358_02870 GlxA family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D U0358_05600 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D U0358_06700 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D U0358_02725 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D U0358_00090 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D U0358_08745 cysB; (GenBank) HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D U0358_12655 hutC; (GenBank) histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D U0358_09330 fadR; (GenBank) fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D U0358_02400 pdhR; (GenBank) pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D U0358_09135 betI; (GenBank) transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D U0358_12605 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D U0358_01335 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D U0358_00645 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D U0358_06415 TetR family transcriptional regulator C-terminal domain-containing protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D U0358_01535 fabR; (GenBank) HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D U0358_06405 asnC; (GenBank) transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D U0358_06565 lrp; (GenBank) leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D U0358_00685 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D U0358_03625 merR; (GenBank) Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D U0358_07835 fur; (GenBank) ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D U0358_09890 zur; (GenBank) zinc uptake transcriptional repressor Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D U0358_01020 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D U0358_10455 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D U0358_12310 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D U0358_00980 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D U0358_10265 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D U0358_11780 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D U0358_02765 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D U0358_03820 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D U0358_10925 sigma 54-interacting transcriptional regulator K18219 txr; sigma-54 dependent transcriptional regulator, tetracycline resistant transcriptional regulator
D U0358_01100 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D U0358_01635 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator
D U0358_10600 transcriptional regulator K07729 K07729; putative transcriptional regulator
D U0358_12715 metJ; (GenBank) met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D U0358_10055 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D U0358_04610 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D U0358_00250 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D U0358_03310 transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D U0358_02475 argR; (GenBank) transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism
D U0358_06250 tyrR; (GenBank) transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D U0358_06205 pspF; (GenBank) phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D U0358_06220 pspC; (GenBank) envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D U0358_03735 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D U0358_03755 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D U0358_12505 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D U0358_01570 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D U0358_01640 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D U0358_11405 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D U0358_11565 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D U0358_09575 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D U0358_02250 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:idp03021]
D U0358_09705 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D U0358_01850 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D U0358_01855 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D U0358_12260 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D U0358_11315 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D U0358_06140 rpoS; (GenBank) RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D U0358_05850 rpoE; (GenBank) RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D U0358_07425 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D U0358_01295 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D U0358_02090 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D U0358_04295 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D U0358_11430 rapA; (GenBank) RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D U0358_05060 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D U0358_10880 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D U0358_01825 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D U0358_02205 sspA; (GenBank) stringent starvation protein SspA K03599 sspA; stringent starvation protein A
D U0358_02210 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D U0358_06670 alpha/beta hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D U0358_05855 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D U0358_05860 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D U0358_05865 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D U0358_11565 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D U0358_05000 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D U0358_01560 greB; (GenBank) transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D U0358_12160 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:idp03019]
D U0358_07215 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D U0358_02035 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D U0358_05880 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D U0358_09955 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D U0358_11855 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D U0358_12170 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D U0358_07900 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D U0358_08135 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D U0358_10205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D U0358_13090 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D U0358_06000 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D U0358_05085 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D U0358_12160 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D U0358_03785 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D U0358_04965 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D U0358_11735 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D U0358_01765 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D U0358_10300 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D U0358_11575 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D U0358_02625 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D U0358_08900 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D U0358_12670 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D U0358_10005 rraB; (GenBank) ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B
D U0358_02075 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D U0358_07305 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D U0358_11550 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:idp03011]
D U0358_07245 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D U0358_05700 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D U0358_09835 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D U0358_09710 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D U0358_09745 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D U0358_09940 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D U0358_01865 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D U0358_09760 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D U0358_02185 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D U0358_09870 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D U0358_09715 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D U0358_01860 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D U0358_09720 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D U0358_09765 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D U0358_05080 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D U0358_08830 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D U0358_09820 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D U0358_09930 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D U0358_09845 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D U0358_04215 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D U0358_11325 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D U0358_01835 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D U0358_09850 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D U0358_09865 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D U0358_09860 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D U0358_09770 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D U0358_09755 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D U0358_09925 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D U0358_01840 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D U0358_01830 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D U0358_01845 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D U0358_02180 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D U0358_09780 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D U0358_09735 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D U0358_09830 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D U0358_09700 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D U0358_09750 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D U0358_08815 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D U0358_07450 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D U0358_02490 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D U0358_09840 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D U0358_09855 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D U0358_09775 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D U0358_02495 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D U0358_01355 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D U0358_09825 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D U0358_09740 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D U0358_12705 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D U0358_07190 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D U0358_01360 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D U0358_00315 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D U0358_07455 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D U0358_09725 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D U0358_05280 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D U0358_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_03960 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_09675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_11680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_03965 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_09670 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_11675 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:idp03009]
D U0358_05880 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D U0358_11855 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D U0358_05885 era; (GenBank) GTPase Era K03595 era; GTPase
D U0358_02500 cgtA; (GenBank) Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D U0358_11565 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D U0358_05060 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D U0358_10880 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D U0358_01825 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D U0358_11475 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D U0358_00395 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D U0358_02580 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D U0358_01275 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D U0358_11395 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D U0358_00260 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D U0358_02255 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D U0358_02235 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D U0358_12775 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D U0358_12900 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D U0358_09950 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D U0358_05015 rlmE; (GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D U0358_05145 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D U0358_11920 rlmJ; (GenBank) 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D U0358_06890 rlmKL; (GenBank) bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D U0358_05615 rlmM; (GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D U0358_10435 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D U0358_05905 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D U0358_11435 rluA; (GenBank) bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D U0358_08930 rluB; (GenBank) 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D U0358_07210 rluC; (GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D U0358_03925 rluD; (GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D U0358_07015 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D U0358_09640 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase / [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]
D U0358_02600 rimK; (GenBank) 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D U0358_08825 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D U0358_11120 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D U0358_11770 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D U0358_05455 prmB; (GenBank) 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D U0358_07035 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D U0358_07215 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D U0358_02035 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D U0358_11410 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D U0358_07555 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D U0358_10205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D U0358_10830 srmB; (GenBank) ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D U0358_10400 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D U0358_01770 hflX; (GenBank) ribosome rescue GTPase HflX K03665 hflX; GTPase
D U0358_00425 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D U0358_12255 spoT; (GenBank) bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D U0358_05070 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D U0358_05055 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D U0358_05150 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D U0358_05190 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D U0358_05010 yhbY; (GenBank) ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D U0358_02055 yjgA; (GenBank) ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein
D U0358_06910 rmf; (GenBank) ribosome modulation factor K03812 rmf; ribosome modulation factor
D U0358_02085 hpf; (GenBank) ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor
D U0358_05270 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D U0358_07195 yceD; (GenBank) 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:idp03016]
D U0358_10080 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D U0358_09080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D U0358_05495 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D U0358_04240 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D U0358_05170 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D U0358_06310 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D U0358_07845 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D U0358_12695 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D U0358_05820 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D U0358_04435 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D U0358_08905 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D U0358_07105 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D U0358_07465 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D U0358_06590 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D U0358_04705 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D U0358_10000 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D U0358_10415 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D U0358_07445 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D U0358_07440 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D U0358_11495 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D U0358_11970 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D U0358_12635 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D U0358_06295 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D U0358_05200 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D U0358_10155 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D U0358_11600 SAM-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D U0358_05500 tsaA; (GenBank) tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D U0358_04785 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D U0358_05075 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D U0358_06115 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D U0358_04660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_10450 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_00425 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D U0358_01760 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D U0358_00295 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D U0358_00265 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D U0358_06400 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D U0358_01720 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D U0358_03170 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D U0358_00310 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D U0358_02240 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D U0358_09280 rnt; (GenBank) ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D U0358_12530 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D U0358_09355 rnd; (GenBank) ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D U0358_09585 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D U0358_00345 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D U0358_00340 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D U0358_11570 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D U0358_01655 ybaK; (GenBank) Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D U0358_03290 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D U0358_09885 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D U0358_11775 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D U0358_04425 cmoA; (GenBank) carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D U0358_04420 cmoB; (GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D U0358_07350 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D U0358_11700 trmA; (GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D U0358_08820 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D U0358_12230 trmH; (GenBank) tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D U0358_10460 trmJ; (GenBank) tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D U0358_12550 trmL; (GenBank) tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D U0358_05680 truC; (GenBank) tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D U0358_11435 rluA; (GenBank) bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D U0358_07020 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D U0358_07000 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D U0358_00360 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D U0358_06600 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D U0358_06605 DsrE family protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D U0358_06610 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D U0358_06595 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D U0358_00890 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D U0358_05830 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D U0358_04690 miaE; (GenBank) tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D U0358_04760 mnmC; (GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D U0358_11345 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D U0358_05360 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D U0358_05365 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D U0358_05650 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D U0358_12940 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D U0358_06395 mnmH; (GenBank) tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D U0358_11340 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D U0358_10840 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D U0358_08625 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D U0358_10235 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D U0358_09380 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D U0358_10100 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D U0358_01745 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D U0358_02660 tcdA; (GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D U0358_09955 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D U0358_05085 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:idp03012]
D U0358_08760 yciH; (GenBank) stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1
D U0358_05065 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D U0358_07460 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D U0358_01730 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D U0358_05705 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D U0358_01810 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D U0358_01875 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D U0358_01870 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D U0358_05305 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D U0358_05715 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D U0358_05310 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D U0358_05275 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D U0358_06540 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D U0358_11715 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D U0358_11710 epmA; (GenBank) EF-P lysine aminoacylase EpmA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D U0358_11720 epmB; (GenBank) EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D U0358_05465 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D U0358_05815 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D U0358_09615 prfC; (GenBank) peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D U0358_08170 arfB; (GenBank) alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:idp03110]
D U0358_06535 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D U0358_03935 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D U0358_04875 clpX; (GenBank) ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D U0358_12680 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D U0358_09455 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D U0358_04965 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D U0358_11735 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D U0358_04970 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D U0358_11445 djlA; (GenBank) co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D U0358_10395 hslO; (GenBank) Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D U0358_04960 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D U0358_13075 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D U0358_10390 hslR; (GenBank) ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D U0358_11740 co-chaperone GroES K04078 groES; chaperonin GroES
D U0358_02165 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D U0358_05020 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D U0358_00240 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D U0358_01325 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D U0358_11660 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D U0358_12960 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D U0358_09550 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D U0358_04710 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D U0358_04890 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D U0358_11900 fkpA; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D U0358_04250 fkpB; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D U0358_05825 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D U0358_12400 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D U0358_11465 surA; (GenBank) peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D U0358_10555 thioredoxin family protein K03671 TXN; thioredoxin
D U0358_12165 trxA; (GenBank) thioredoxin TrxA K03671 TXN; thioredoxin
D U0358_00625 trxC; (GenBank) thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D U0358_10220 trxA; (GenBank) thioredoxin K05838 ybbN; putative thioredoxin
D U0358_07300 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1
D U0358_09290 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D U0358_00060 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D U0358_09335 dsbB; (GenBank) disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D U0358_05805 dsbC; (GenBank) bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D U0358_11750 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D U0358_04380 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:idp04131]
D U0358_10440 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D U0358_06370 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D U0358_06805 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D U0358_06790 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D U0358_09455 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:idp03051]
D U0358_09455 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:idp03032]
D U0358_08670 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D U0358_04885 hupB; (GenBank) nucleoid-associated protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D U0358_07435 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D U0358_07240 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D U0358_00320 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D U0358_09910 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D U0358_11320 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D U0358_01905 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D U0358_08635 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D U0358_00325 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D U0358_09995 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D U0358_05160 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D U0358_07145 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D U0358_03985 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_07575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_08665 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_09470 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D U0358_08545 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D U0358_00440 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D U0358_08700 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D U0358_12765 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D U0358_07815 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D U0358_07795 hda; (GenBank) DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D U0358_07270 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D U0358_00335 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D U0358_10015 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D U0358_10020 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D U0358_04820 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:idp03036]
D U0358_05880 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D U0358_05515 H-NS family nucleoid-associated regulatory protein K03746 hns; DNA-binding protein H-NS
D U0358_04885 hupB; (GenBank) nucleoid-associated protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D U0358_07435 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D U0358_07240 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D U0358_00320 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D U0358_06300 hspQ; (GenBank) heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D U0358_00660 dps; (GenBank) DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D U0358_12110 Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D U0358_11780 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D U0358_01765 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D U0358_06565 lrp; (GenBank) leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D U0358_06520 yejK; (GenBank) nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein
D U0358_08710 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D U0358_08940 ScpA family protein K05896 scpA; segregation and condensation protein A
D U0358_08935 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D U0358_02315 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D U0358_06100 ftsB; (GenBank) cell division protein FtsB K05589 ftsB; cell division protein FtsB
D U0358_01285 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D U0358_02265 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D U0358_06570 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D U0358_02260 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL
D U0358_02310 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D U0358_02290 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D U0358_01290 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D U0358_02320 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D U0358_08705 zipA; (GenBank) cell division protein ZipA K03528 zipA; cell division protein ZipA
D U0358_10670 zapA; (GenBank) cell division protein ZapA K09888 zapA; cell division protein ZapA
D U0358_06880 cell division protein ZapC K18657 zapC; cell division protein ZapC
D U0358_02355 zapD; (GenBank) cell division protein ZapD K18778 zapD; cell division protein ZapD
D U0358_02175 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D U0358_10225 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE
D U0358_01750 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D U0358_03370 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06360 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06940 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_11880 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_01455 SOS-response cell division inhibitor K13053 sulA; cell division inhibitor SulA
D U0358_01335 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D U0358_07815 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication
D U0358_02015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D U0358_02020 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D U0358_02025 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D U0358_05135 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D U0358_00255 ParA family protein K03496 parA; chromosome partitioning protein
D U0358_04320 ParA family protein K03496 parA; chromosome partitioning protein
D U0358_00250 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D U0358_10015 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D U0358_10020 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D U0358_00265 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D U0358_00260 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D U0358_13120 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D U0358_05800 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D U0358_06315 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D U0358_06455 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D U0358_11175 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D U0358_00450 yihA; (GenBank) ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:idp03400]
D U0358_00855 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D U0358_07410 phrB; (GenBank) deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D U0358_02720 ung; (GenBank) uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D U0358_10165 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D U0358_09270 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D U0358_02345 mutT; (GenBank) 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D U0358_01340 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D U0358_00640 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D U0358_10195 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D U0358_06720 alkB; (GenBank) DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D U0358_06630 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D U0358_00350 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D U0358_01375 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D U0358_07710 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D U0358_05810 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D U0358_08700 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D U0358_00440 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D U0358_01895 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D U0358_09205 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D U0358_06640 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D U0358_13110 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D U0358_01850 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D U0358_01855 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D U0358_09705 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D U0358_12260 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D U0358_08010 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D U0358_06145 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D U0358_01755 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D U0358_02620 mutH; (GenBank) DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D U0358_07320 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D U0358_10310 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D U0358_10855 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D U0358_08635 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D U0358_00325 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D U0358_09995 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D U0358_05160 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D U0358_07145 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D U0358_03985 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_07575 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_08665 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D U0358_09470 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D U0358_01905 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D U0358_12765 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D U0358_13005 recB; (GenBank) exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D U0358_13010 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D U0358_13000 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D U0358_06155 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D U0358_04450 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D U0358_04455 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D U0358_04445 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D U0358_12700 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D U0358_09935 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N
D U0358_09515 primosomal replication protein K04067 priC; primosomal replication protein N''
D U0358_09590 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D U0358_00330 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D U0358_12225 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D U0358_05890 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D U0358_09460 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D U0358_04950 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D U0358_10780 rdgC; (GenBank) recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D U0358_07270 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D U0358_00335 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D U0358_04820 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D U0358_04885 hupB; (GenBank) nucleoid-associated protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D U0358_11780 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D U0358_07435 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D U0358_07240 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D U0358_13090 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D U0358_05515 H-NS family nucleoid-associated regulatory protein K03746 hns; DNA-binding protein H-NS
D U0358_01140 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D U0358_01460 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D U0358_00045 SulA-like SOS-response cell division inhibitor K14160 imuA; protein ImuA
D U0358_00040 DNA polymerase Y family protein K14161 imuB; protein ImuB
D U0358_00035 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D U0358_08910 regulatory protein RecX K03565 recX; regulatory protein
D U0358_01155 rep; (GenBank) DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D U0358_09385 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D U0358_07290 nrdB; (GenBank) class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:idp03029]
D U0358_02195 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D U0358_05065 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D U0358_07460 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D U0358_05705 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D U0358_01810 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D U0358_01875 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D U0358_01870 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D U0358_05885 era; (GenBank) GTPase Era K03595 era; GTPase
D U0358_11495 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D U0358_05170 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D U0358_04435 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D U0358_12695 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D U0358_01905 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D U0358_05740 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D U0358_04965 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D U0358_04960 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D U0358_11735 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D U0358_11740 co-chaperone GroES K04078 groES; chaperonin GroES
D U0358_04970 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D U0358_04660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_10450 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_09290 Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D U0358_06315 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D U0358_01410 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D U0358_01440 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D U0358_01415 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D U0358_00300 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D U0358_01425 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D U0358_01405 SCO family protein K07152 SCO1; protein SCO1
D U0358_06040 SCO family protein K07152 SCO1; protein SCO1
D U0358_09455 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:idp02000]
D U0358_07975 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D U0358_13055 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D U0358_03215 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D U0358_11060 ATP-binding cassette domain-containing protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D U0358_11065 ATP-binding cassette domain-containing protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D U0358_06900 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D U0358_04590 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D U0358_04585 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D U0358_04580 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D U0358_04070 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D U0358_04075 ABC transporter permease subunit K05778 ynjC; putative thiamine transport system permease protein
D U0358_04080 ATP-binding cassette domain-containing protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D U0358_02135 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D U0358_08365 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D U0358_02130 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D U0358_08355 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D U0358_02125 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D U0358_08360 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D U0358_08370 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D U0358_02140 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D U0358_02145 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D U0358_10720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D U0358_10715 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D U0358_10710 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D U0358_10705 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D U0358_06200 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D U0358_06195 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein
D U0358_06190 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein
D U0358_06185 oligopeptide/dipeptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D U0358_06180 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein
D U0358_00815 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D U0358_00820 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D U0358_00825 ATP-binding cassette domain-containing protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D U0358_09985 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D U0358_09980 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D U0358_02095 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D U0358_02525 ABC transporter permease K09696 natB; sodium transport system permease protein
D U0358_02520 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D U0358_07990 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D U0358_08000 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D U0358_07995 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D U0358_04365 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D U0358_04360 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D U0358_04355 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D U0358_04350 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D U0358_10515 ATP-binding cassette domain-containing protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D U0358_01290 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D U0358_01285 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D U0358_01525 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D U0358_01665 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D U0358_11605 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D U0358_01520 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D U0358_01670 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D U0358_11610 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D U0358_09040 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D U0358_11640 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D U0358_09045 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D U0358_11635 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D U0358_00905 sufC; (GenBank) Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D U0358_12335 SLC13 family permease K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D U0358_09435 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D U0358_01395 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D U0358_09210 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D U0358_12270 CynX/NimT family MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D U0358_10810 arsJ; (GenBank) organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D U0358_01040 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D U0358_09555 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D U0358_08530 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D U0358_08150 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D U0358_02630 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D U0358_02070 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D U0358_07720 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D U0358_02080 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D U0358_11000 ammonium transporter K03320 amt; ammonium transporter, Amt family
D U0358_02205 sspA; (GenBank) stringent starvation protein SspA K03599 sspA; stringent starvation protein A
D U0358_04900 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D U0358_04905 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D U0358_06615 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D U0358_10325 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D U0358_00055 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D U0358_11090 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D U0358_02065 mgtE; (GenBank) magnesium transporter K06213 mgtE; magnesium transporter
D U0358_10850 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D U0358_10845 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D U0358_10255 tetratricopeptide repeat protein K21217 motX; sodium-type polar flagellar protein MotX
D U0358_09275 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D U0358_09500 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D U0358_09505 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D U0358_10760 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D U0358_10765 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D U0358_09495 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D U0358_10755 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D U0358_04465 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D U0358_04470 tolR; (GenBank) protein TolR K03560 tolR; biopolymer transport protein TolR
D U0358_04575 CorA family divalent cation transporter K16074 zntB; zinc transporter
D U0358_06585 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D U0358_03620 merT; (GenBank) mercuric ion transporter MerT K08363 merT; mercuric ion transport protein
D U0358_03615 merP; (GenBank) mercury resistance system periplasmic binding protein MerP K08364 merP; periplasmic mercuric ion binding protein
D U0358_08845 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D U0358_12095 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D U0358_10160 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D U0358_08105 porin family protein K11934 ompX; outer membrane protein X
D U0358_12320 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D U0358_12920 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D U0358_08270 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D U0358_12820 ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D U0358_00810 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D U0358_00105 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_00130 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_00975 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_02875 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_03990 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_04000 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_04005 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_04730 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_07540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_09145 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_10945 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_11100 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_11670 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_12115 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_12145 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_12935 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D U0358_00600 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D U0358_03650 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D U0358_03680 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D U0358_05965 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D U0358_10035 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D U0358_03210 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D U0358_03120 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein
D U0358_05740 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D U0358_10405 bamB; (GenBank) outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D U0358_07750 bamC; (GenBank) outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D U0358_03920 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D U0358_04945 bamE; (GenBank) outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D U0358_09660 autotransporter assembly complex family protein K07278 tamA; translocation and assembly module TamA
D U0358_09665 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D U0358_02100 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D U0358_02105 lptC; (GenBank) LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D U0358_11460 lptD; (GenBank) LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D U0358_05165 lptE; (GenBank) LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D U0358_05185 corC; (GenBank) CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein
D U0358_00145 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D U0358_03635 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D U0358_12555 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D U0358_05930 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D U0358_12955 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D U0358_00610 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D U0358_03640 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D U0358_03690 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D U0358_05975 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D U0358_02435 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D U0358_03375 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_06355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_06945 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_11875 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_08415 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump
D U0358_13100 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D U0358_03630 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D U0358_11850 BCCT family transporter K05020 opuD; glycine betaine transporter
D U0358_12295 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D U0358_04565 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D U0358_12430 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D U0358_08050 sodium:solute symporter family protein K20989 DUR3; urea-proton symporter
D U0358_03975 sodium:solute symporter family protein K14393 actP; cation/acetate symporter
D U0358_06855 nhaC; (GenBank) Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D U0358_03285 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D U0358_10140 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D U0358_08615 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter
D U0358_01125 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D U0358_05335 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D U0358_08490 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D U0358_00390 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D U0358_01120 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D U0358_05485 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D U0358_11525 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D U0358_10820 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D U0358_11815 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D U0358_06370 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D U0358_10800 arsB; (GenBank) ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D U0358_09785 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D U0358_09790 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D U0358_09795 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D U0358_09800 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D U0358_09805 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D U0358_09810 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D U0358_04230 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D U0358_10735 AEC family transporter K24180 mleP; malate permease and related proteins
D U0358_12440 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D U0358_06750 LysE family translocator K05835 rhtC; threonine efflux protein
D U0358_07765 AI-2E family transporter K03548 perM; putative permease
D U0358_02290 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D U0358_00805 cytochrome c/FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D U0358_06380 carbon starvation protein A K06200 cstA; carbon starvation protein
D U0358_09490 energy transducer TonB K03832 tonB; periplasmic protein TonB
D U0358_10750 energy transducer TonB K03832 tonB; periplasmic protein TonB
D U0358_04485 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D U0358_04475 tolA; (GenBank) cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D U0358_04480 tolB; (GenBank) Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D U0358_08870 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D U0358_08875 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D U0358_08880 oxaloacetate decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D U0358_01210 protein-disulfide reductase DsbD family protein K08344 scsB; suppressor for copper-sensitivity B
D U0358_00605 membrane fusion-like protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D U0358_03645 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D U0358_03685 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D U0358_05970 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D U0358_02430 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D U0358_03220 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D U0358_03370 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06360 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06940 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_11880 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_08410 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D U0358_02215 dolP; (GenBank) division/outer membrane stress-associated lipid-binding lipoprotein K28369 dolP; outer membrane lipoprotein DolP
D U0358_12135 pnuC; (GenBank) nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D U0358_05470 entericidin A/B family lipoprotein K16348 ecnB; entericidin B
D U0358_04375 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D U0358_03595 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:idp02044]
D U0358_10035 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
D U0358_03215 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D U0358_03220 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D U0358_03210 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system
D U0358_10075 AAA family ATPase K02450 gspA; general secretion pathway protein A
D U0358_10070 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B
D U0358_10385 gspC; (GenBank) type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D U0358_10380 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D U0358_10375 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D U0358_10370 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D U0358_10365 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D U0358_10360 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D U0358_10355 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D U0358_10350 gspJ; (GenBank) type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D U0358_10345 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D U0358_10340 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D U0358_10335 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D U0358_10330 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D U0358_02365 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D U0358_10430 tetratricopeptide repeat protein K02656 pilF; type IV pilus assembly protein PilF
D U0358_12745 pilQ; (GenBank) type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D U0358_10115 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D U0358_05395 SAF domain-containing protein K02279 cpaB; pilus assembly protein CpaB
D U0358_05400 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D U0358_05405 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D U0358_05410 type II secretion system F family protein K12510 tadB; tight adherence protein B
D U0358_05415 type II secretion system F family protein K12511 tadC; tight adherence protein C
D U0358_05370 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA
D U0358_01980 type II secretion system protein K10924 mshA; MSHA pilin protein MshA
D U0358_01975 prepilin-type N-terminal cleavage/methylation domain-containing protein K10925 mshB; MSHA pilin protein MshB
D U0358_01985 prepilin-type N-terminal cleavage/methylation domain-containing protein K10926 mshC; MSHA pilin protein MshC
D U0358_01990 prepilin-type N-terminal cleavage/methylation domain-containing protein K10927 mshD; MSHA pilin protein MshD
D U0358_01960 ATPase, T2SS/T4P/T4SS family K12276 mshE; MSHA biogenesis protein MshE
D U0358_01965 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG
D U0358_01925 Type II secretory pathway component K12279 mshI; MSHA biogenesis protein MshI
D U0358_01930 PilN domain-containing protein K12279 mshI; MSHA biogenesis protein MshI
D U0358_01935 Type II secretory pathway component K12280 mshJ; MSHA biogenesis protein MshJ
D U0358_01940 general secretion pathway protein GspB K12281 mshK; MSHA biogenesis protein MshK
D U0358_01945 mshL; (GenBank) pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D U0358_01950 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM
D U0358_01955 tetratricopeptide repeat protein K12284 mshN; MSHA biogenesis protein MshN
D U0358_01995 type II secretion system protein K12285 mshO; MSHA biogenesis protein MshO
D U0358_02000 Type II secretory pathway component K12286 mshP; MSHA biogenesis protein MshP
D U0358_02005 DUF6701 domain-containing protein K12287 mshQ; MSHA biogenesis protein MshQ
D U0358_04275 prepilin-type N-terminal cleavage/methylation domain-containing protein K02679 ppdA; prepilin peptidase dependent protein A
D U0358_04270 prepilin-type N-terminal cleavage/methylation domain-containing protein K02680 ppdB; prepilin peptidase dependent protein B
D U0358_02380 prepilin-type N-terminal cleavage/methylation domain-containing protein K02682 ppdD; prepilin peptidase dependent protein D
D U0358_02375 ATPase, T2SS/T4P/T4SS family K02504 hofB; protein transport protein HofB
D U0358_02370 type II secretion system F family protein K02505 hofC; protein transport protein HofC
D U0358_10130 YggT family protein K02221 yggT; YggT family protein
D U0358_07220 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D U0358_07980 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D U0358_04280 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D U0358_03905 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D U0358_04340 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D U0358_03840 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D U0358_03850 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D U0358_03855 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D U0358_03880 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D U0358_03885 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D U0358_03890 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D U0358_03895 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D U0358_03900 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D U0358_05805 dsbC; (GenBank) bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D U0358_00940 curlin subunit CsgB K04335 csgB; minor curlin subunit
D U0358_00930 curli production assembly/transport protein CsgE K04337 csgE; curli production assembly/transport component CsgE
D U0358_00925 curli assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF
D U0358_00920 CsgG/HfaB family protein K06214 csgG; curli production assembly/transport component CsgG
D U0358_02340 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D U0358_01325 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D U0358_10915 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D U0358_01820 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D U0358_10910 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D U0358_05040 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D U0358_09730 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D U0358_08835 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D U0358_01280 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D U0358_10920 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D U0358_00300 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D U0358_12205 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D U0358_12200 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D U0358_12195 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:idp02042]
D U0358_08845 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D U0358_12095 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D U0358_12595 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:idp02022]
D U0358_10725 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D U0358_10730 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D U0358_01705 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D U0358_01700 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D U0358_12565 HAMP domain-containing sensor histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D U0358_12570 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D U0358_00715 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D U0358_00710 response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D U0358_08500 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D U0358_02570 arcA; (GenBank) two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D U0358_01045 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D U0358_01035 narL; (GenBank) two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D U0358_06635 LuxR C-terminal-related transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D U0358_01675 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D U0358_01680 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D U0358_06780 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D U0358_12580 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D U0358_12575 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D U0358_04310 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D U0358_04300 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_08775 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_09480 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_04315 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D U0358_04125 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D U0358_03825 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D U0358_03830 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D U0358_00970 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D U0358_00965 response regulator K15012 regA; two-component system, response regulator RegA
D U0358_08765 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
C 02035 Bacterial motility proteins [BR:idp02035]
D U0358_04310 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D U0358_04325 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D U0358_04330 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D U0358_09905 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D U0358_04130 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D U0358_04315 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D U0358_04300 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_08775 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_09480 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D U0358_04305 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D U0358_04125 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D U0358_00695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_01130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_01650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_03425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_03540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_04540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06450 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06675 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_06950 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_08130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_08555 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_09110 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_09620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_11360 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_11490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D U0358_00475 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D U0358_13060 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D U0358_03850 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D U0358_03855 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D U0358_03860 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D U0358_03885 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D U0358_03890 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D U0358_03895 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D U0358_03900 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D U0358_04280 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D U0358_03905 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D U0358_03845 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D U0358_03875 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D U0358_03880 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D U0358_03840 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D U0358_04170 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D U0358_04120 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D U0358_04165 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D U0358_01480 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D U0358_03870 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D U0358_03835 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D U0358_03865 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D U0358_04135 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D U0358_04140 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D U0358_04145 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D U0358_04155 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D U0358_04160 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D U0358_04175 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D U0358_04150 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D U0358_04180 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D U0358_04185 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D U0358_04110 flgN; (GenBank) flagellar export chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D U0358_04105 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP
D U0358_10255 tetratricopeptide repeat protein K21217 motX; sodium-type polar flagellar protein MotX
D U0358_09275 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D U0358_04190 flagellin K02406 fliC; flagellin
D U0358_04200 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D U0358_04205 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D U0358_04295 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D U0358_10850 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D U0358_10845 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D U0358_03820 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D U0358_03825 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D U0358_03830 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D U0358_04115 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D U0358_04195 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D U0358_04285 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D U0358_04290 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D U0358_10115 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D U0358_02365 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D U0358_10430 tetratricopeptide repeat protein K02656 pilF; type IV pilus assembly protein PilF
D U0358_12745 pilQ; (GenBank) type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D U0358_05370 pilus assembly protein K02651 flp; pilus assembly protein Flp/PilA
D U0358_05395 SAF domain-containing protein K02279 cpaB; pilus assembly protein CpaB
D U0358_05400 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC
D U0358_05405 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:idp04812]
D U0358_02015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D U0358_02320 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D U0358_02315 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D U0358_00255 ParA family protein K03496 parA; chromosome partitioning protein
D U0358_04320 ParA family protein K03496 parA; chromosome partitioning protein
D U0358_00250 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:idp04147]
D U0358_09455 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D U0358_06000 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D U0358_06805 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D U0358_11375 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D U0358_06790 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D U0358_09550 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D U0358_09875 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D U0358_09285 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D U0358_11735 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D U0358_04965 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D U0358_03145 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D U0358_04735 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D U0358_11995 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D U0358_03245 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D U0358_01810 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D U0358_01875 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D U0358_06295 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D U0358_09360 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D U0358_05565 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D U0358_02540 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D U0358_09450 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D U0358_09475 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D U0358_03450 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D U0358_01245 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D U0358_11625 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D U0358_12585 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D U0358_12180 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D U0358_06255 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D U0358_06245 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D U0358_08375 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_08380 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_10305 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_10695 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D U0358_11785 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D U0358_02415 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D U0358_02685 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D U0358_05035 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D U0358_10200 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:idp02048]
D U0358_11265 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D U0358_12485 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D U0358_11240 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D U0358_12480 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D U0358_11235 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D U0358_12475 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D U0358_12765 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D U0358_12455 HNH endonuclease signature motif containing protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D U0358_12465 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D U0358_12470 McrC family protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D U0358_11245 restriction endonuclease K07448 mrr; restriction system protein
D U0358_04060 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D U0358_04055 type II toxin-antitoxin system Phd/YefM family antitoxin K18923 stbD; antitoxin StbD
D U0358_01585 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D U0358_01580 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D U0358_02665 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_02755 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_02990 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_02995 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_03060 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_03260 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_03330 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_03405 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_10595 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D U0358_12980 type II toxin-antitoxin system YafO family toxin K19160 yafO; mRNA interferase YafO [EC:3.1.-.-]
D U0358_12985 yafN; (GenBank) type I toxin-antitoxin system antitoxin YafN K19161 yafN; antitoxin YafN
D U0358_06220 pspC; (GenBank) envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D U0358_06215 pspB; (GenBank) envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D U0358_02760 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D U0358_02765 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D U0358_10530 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D U0358_02320 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D U0358_02015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D U0358_10015 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D U0358_10020 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D U0358_09080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D U0358_05835 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D U0358_04660 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D U0358_10450 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:idp04090]
D U0358_04735 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D U0358_11995 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:idp01504]
D U0358_03285 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump
D U0358_03370 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06360 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_06940 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_11880 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D U0358_03375 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_06355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_06945 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_11875 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D U0358_10035 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:idp00537]
D U0358_08375 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_08380 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_10305 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D U0358_09875 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:idp03100]
D U0358_00015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_03955 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_09070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_09680 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_11685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D U0358_00545 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_04095 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_04845 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_08885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_08890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D U0358_09220 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D U0358_09225 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D U0358_08650 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D U0358_08655 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D U0358_06655 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D U0358_05220 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D U0358_05225 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D U0358_09055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D U0358_09060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D U0358_09065 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D U0358_01800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D U0358_06650 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D U0358_11840 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D U0358_11845 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D U0358_04850 tRNA-His K14226 tRNA-His; tRNA His
D U0358_00020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D U0358_03950 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D U0358_09685 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D U0358_11690 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D U0358_05045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_05215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_05230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_06660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_09970 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D U0358_04495 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D U0358_04500 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D U0358_05050 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_05235 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_06885 tRNA-Met K14230 tRNA-Met; tRNA Met
D U0358_11300 tRNA-Ile K14230 tRNA-Met; tRNA Met
D U0358_03770 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D U0358_04840 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D U0358_04855 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D U0358_06510 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D U0358_04545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D U0358_06620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D U0358_08895 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D U0358_01790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D U0358_01805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D U0358_01815 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D U0358_09650 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D U0358_01795 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D U0358_05790 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D U0358_07495 tRNA-Val K14237 tRNA-Val; tRNA Val
D U0358_09085 tRNA-Val K14237 tRNA-Val; tRNA Val
D U0358_09090 tRNA-Val K14237 tRNA-Val; tRNA Val
D U0358_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_03960 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_09675 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_11680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D U0358_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_03965 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_09670 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_11675 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D U0358_02240 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D U0358_08470 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D U0358_10675 ssrS; (GenBank) 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA
D U0358_09530 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D U0358_02860 L-carnitine dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D U0358_00100 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D U0358_10805 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D U0358_08955 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D U0358_05520 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D U0358_06930 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D U0358_10445 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D U0358_08035 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D U0358_06795 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D U0358_03485 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D U0358_05770 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D U0358_07760 bcp; (GenBank) thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D U0358_11040 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D U0358_12065 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D U0358_00680 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D U0358_13105 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D U0358_00080 carboxymuconolactone decarboxylase family protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D U0358_00085 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D U0358_02470 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D U0358_05775 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D U0358_06065 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D U0358_03610 merA; (GenBank) mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D U0358_01165 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D U0358_01180 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D U0358_12875 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D U0358_07780 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D U0358_01055 nrdG; (GenBank) anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D U0358_06125 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D U0358_07385 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D U0358_11005 cfa; (GenBank) cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D U0358_05180 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D U0358_06550 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D U0358_06545 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D U0358_02640 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D U0358_04650 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D U0358_07055 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D U0358_10045 glnE; (GenBank) bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D U0358_09920 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D U0358_06330 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D U0358_03410 aceK; (GenBank) bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D U0358_00780 macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D U0358_01890 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D U0358_02890 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D U0358_04460 ybgC; (GenBank) tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D U0358_08950 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D U0358_05445 sixA; (GenBank) phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D U0358_07135 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D U0358_09610 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D U0358_12190 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D U0358_07820 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D U0358_00405 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D U0358_02045 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D U0358_10050 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D U0358_07200 Maf family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D U0358_04920 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D U0358_08345 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D U0358_01740 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D U0358_11620 mpl; (GenBank) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D U0358_12355 pgsB; (GenBank) poly-gamma-glutamate synthase PgsB K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-]
D U0358_10525 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D U0358_09255 rsxD; (GenBank) electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D U0358_09250 rsxC; (GenBank) electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D U0358_09245 rsxB; (GenBank) electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D U0358_04620 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D U0358_04625 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D U0358_04630 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D U0358_04635 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D U0358_04640 nqrE; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D U0358_04645 nqrF; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D U0358_06980 heavy metal translocating P-type ATPase metal-binding domain-containing protein K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D U0358_11560 sfsA; (GenBank) DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D U0358_07295 yfaE; (GenBank) class I ribonucleotide reductase maintenance protein YfaE K11107 yfaE; ferredoxin
D U0358_09260 rsxG; (GenBank) electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D U0358_09265 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D U0358_09240 rsxA; (GenBank) electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D U0358_00270 flavodoxin domain-containing protein K06205 mioC; MioC protein
D U0358_04750 fldB; (GenBank) flavodoxin FldB K03840 fldB; flavodoxin II
D U0358_07830 fldA; (GenBank) flavodoxin FldA K03839 fldA; flavodoxin I
D U0358_02680 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D U0358_08115 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D U0358_08715 cysZ; (GenBank) sulfate transporter CysZ K06203 cysZ; CysZ protein
D U0358_10120 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D U0358_07235 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D U0358_07230 lapB; (GenBank) lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D U0358_00835 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D U0358_13160 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein
D U0358_12210 ubiB; (GenBank) ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D U0358_12215 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D U0358_01160 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D U0358_08525 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
D U0358_08550 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D U0358_12610 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D U0358_00500 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D U0358_00480 cold-shock protein K03704 cspA; cold shock protein
D U0358_06525 cspD; (GenBank) cold shock domain-containing protein CspD K03704 cspA; cold shock protein
D U0358_12835 cold-shock protein K03704 cspA; cold shock protein
D U0358_12910 cold-shock protein K03704 cspA; cold shock protein
D U0358_11895 rsd; (GenBank) sigma D regulator K07740 rsd; regulator of sigma D
D U0358_10995 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D U0358_01555 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D U0358_02770 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D U0358_08110 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D U0358_06530 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D U0358_04865 tig; (GenBank) trigger factor K03545 tig; trigger factor
D U0358_05430 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D U0358_01220 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D U0358_01365 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D U0358_11925 OsmC family protein K07397 yhfA; putative redox protein
D U0358_01390 nfuA; (GenBank) Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D U0358_01350 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D U0358_03740 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D U0358_08720 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D U0358_02225 YraN family protein K07460 yraN; putative endonuclease
D U0358_00285 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D U0358_00410 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D U0358_06580 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D U0358_00420 topoisomerase DNA-binding C4 zinc finger domain-containing protein K07479 yrdD; putative DNA topoisomerase
D U0358_00175 IS256 family transposase K07493 K07493; putative transposase
D U0358_08215 IS256 family transposase K07493 K07493; putative transposase
D U0358_02960 RNA-guided endonuclease TnpB family protein K07496 K07496; putative transposase
D U0358_03115 tyrosine-type recombinase/integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D U0358_06210 pspA; (GenBank) phage shock protein PspA K03969 pspA; phage shock protein A
D U0358_09465 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
D U0358_00850 DASH family cryptochrome K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D U0358_12330 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D U0358_02880 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D U0358_07565 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D U0358_07615 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D U0358_11350 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D U0358_06175 putP; (GenBank) sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family
D U0358_01510 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D U0358_06850 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D U0358_07125 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D U0358_10230 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D U0358_06815 AGCS family amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D U0358_08080 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D U0358_09000 ispZ; (GenBank) septation protein IspZ K06190 ispZ; intracellular septation protein
D U0358_01105 hemerythrin domain-containing protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D U0358_07855 pxpB; (GenBank) 5-oxoprolinase subunit PxpB K06351 kipI; inhibitor of KinA
D U0358_01310 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D U0358_05655 syd; (GenBank) SecY-interacting protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D U0358_02395 ampE; (GenBank) beta-lactamase regulator AmpE K03807 ampE; AmpE protein
D U0358_06840 proQ; (GenBank) RNA chaperone ProQ K03607 proQ; ProP effector
D U0358_06995 uspE; (GenBank) universal stress protein UspE K14055 uspE; universal stress protein E
D U0358_12590 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D U0358_07430 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator
D U0358_05195 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D U0358_11425 PhoH family protein K07175 phoH2; PhoH-like ATPase
D U0358_03980 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
D U0358_07570 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
D U0358_09605 AhpA/YtjB family protein K07186 smp; membrane protein
C 99992 Structural proteins
D U0358_06575 lolA; (GenBank) outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D U0358_05295 lolB; (GenBank) lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB
D U0358_04395 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D U0358_05745 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D U0358_06135 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D U0358_05090 nlpI; (GenBank) lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D U0358_00960 OmpW family outer membrane protein K07275 ompW; outer membrane protein
D U0358_12360 pgsC; (GenBank) poly-gamma-glutamate biosynthesis protein PgsC K22116 capC; gamma-polyglutamate biosynthesis protein CapC
D U0358_11365 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D U0358_09370 Slp family lipoprotein K07285 slp; outer membrane lipoprotein
D U0358_09545 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein
D U0358_04370 ccmE; (GenBank) cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D U0358_04385 cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D U0358_10425 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D U0358_10700 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D U0358_04560 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D U0358_11745 cutA; (GenBank) divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D U0358_11480 apaG; (GenBank) Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D U0358_03590 copper resistance protein B K07233 pcoB; copper resistance protein B
D U0358_01090 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D U0358_04805 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D U0358_07005 glucosaminidase domain-containing protein K03796 bax; Bax protein
D U0358_12770 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D U0358_05265 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D U0358_02925 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D U0358_06165 rssA; (GenBank) patatin-like phospholipase RssA K07001 K07001; NTE family protein
D U0358_11515 erpA; (GenBank) iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D U0358_00910 sufB; (GenBank) Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D U0358_00900 sufD; (GenBank) Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D U0358_12630 virulence factor BrkB family protein K07058 K07058; membrane protein
D U0358_00880 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D U0358_02675 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D U0358_12105 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D U0358_07025 hflD; (GenBank) high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D U0358_08245 LemA family protein K03744 lemA; LemA protein
D U0358_11910 SlyX family protein K03745 slyX; SlyX protein
D U0358_00415 DUF494 family protein K03747 smg; Smg protein
D U0358_04800 SPOR domain-containing protein K03749 dedD; DedD protein
D U0358_12760 AAA family ATPase K03112 damX; DamX protein
D U0358_08225 PH domain-containing protein K08981 K08981; putative membrane protein
D U0358_06230 TIGR01620 family protein K08990 ycjF; putative membrane protein
D U0358_01270 DUF1145 domain-containing protein K08993 yhhL; putative membrane protein
D U0358_09190 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein
D U0358_12340 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA
C 99997 Function unknown
D U0358_06225 YcjX family protein K06918 K06918; uncharacterized protein
D U0358_01300 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D U0358_07395 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D U0358_02595 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D U0358_01255 VOC family protein K06991 K06991; uncharacterized protein
D U0358_10590 VOC family protein K06996 K06996; uncharacterized protein
D U0358_01000 MMPL family transporter K07003 K07003; uncharacterized protein
D U0358_07330 MMPL family transporter K07003 K07003; uncharacterized protein
D U0358_02950 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D U0358_08025 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D U0358_06515 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D U0358_05605 alpha/beta fold hydrolase K07020 K07020; uncharacterized protein
D U0358_08560 VOC family protein K07032 K07032; uncharacterized protein
D U0358_01735 YheV family putative zinc ribbon protein K07070 K07070; uncharacterized protein
D U0358_09035 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D U0358_04220 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D U0358_00170 permease K07089 K07089; uncharacterized protein
D U0358_02635 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D U0358_06095 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D U0358_11035 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D U0358_02230 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D U0358_04025 AAA family ATPase K07133 K07133; uncharacterized protein
D U0358_09445 MAPEG family protein K07136 K07136; uncharacterized protein
D U0358_00790 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D U0358_07420 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D U0358_00305 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D U0358_05420 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D U0358_06335 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D U0358_05115 ybeD; (GenBank) DUF493 family protein YbeD K09158 K09158; uncharacterized protein
D U0358_09340 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D U0358_08220 PH domain-containing protein K09167 K09167; uncharacterized protein
D U0358_07390 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D U0358_02585 FapA family protein K09749 K09749; uncharacterized protein
D U0358_09005 YciI family protein K09780 K09780; uncharacterized protein
D U0358_01095 YbaN family protein K09790 K09790; uncharacterized protein
D U0358_07965 Trm112 family protein K09791 K09791; uncharacterized protein
D U0358_06990 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D U0358_09180 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D U0358_01305 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D U0358_05440 RnfH family protein K09801 K09801; uncharacterized protein
D U0358_03190 BrnT family toxin K09803 K09803; uncharacterized protein
D U0358_08915 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D U0358_04655 nqrM; (GenBank) (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D U0358_02735 DUF2309 domain-containing protein K09822 K09822; uncharacterized protein
D U0358_10905 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D U0358_02350 yacG; (GenBank) DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D U0358_01265 YjaG family protein K09891 K09891; uncharacterized protein
D U0358_00460 GTPase-activating protein K09894 K09894; uncharacterized protein
D U0358_10665 UPF0149 family protein K09895 K09895; uncharacterized protein
D U0358_11805 DUF413 domain-containing protein K09897 K09897; uncharacterized protein
D U0358_01725 YheU family protein K09898 K09898; uncharacterized protein
D U0358_07715 yfbV; (GenBank) terminus macrodomain insulation protein YfbV K09899 K09899; uncharacterized protein
D U0358_09350 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D U0358_02170 YhcB family protein K09908 K09908; uncharacterized protein
D U0358_06825 DUF1315 family protein K09916 K09916; uncharacterized protein
D U0358_08145 YebG family protein K09918 K09918; uncharacterized protein
D U0358_12895 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D U0358_10025 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D U0358_13125 DUF484 family protein K09921 K09921; uncharacterized protein
D U0358_06975 FixH family protein K09926 K09926; uncharacterized protein
D U0358_07985 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D U0358_07800 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D U0358_12880 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D U0358_12845 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D U0358_11645 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D U0358_06705 YdbL family protein K09978 K09978; uncharacterized protein
D U0358_03815 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D U0358_07680 VWA domain-containing protein K09989 K09989; uncharacterized protein
D U0358_11355 TIGR00153 family protein K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 6, 2026