+D GENES KO
#
KEGG Orthology (KO) - Isorropodon fossajaponicum endosymbiont
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ifo00010]
D CVFO_0707 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CVFO_0399 pfkA; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CVFO_0369 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CVFO_0365 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CVFO_0367 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CVFO_1505 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CVFO_1204 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVFO_0368 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CVFO_0453 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CVFO_0324 pdhC; pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_0874 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVFO_0451 pgm; phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:ifo00020]
D CVFO_1512 gltA; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CVFO_1170 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CVFO_0942 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_0424 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CVFO_0423 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CVFO_0626 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CVFO_0147 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CVFO_0453 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CVFO_0324 pdhC; pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ifo00030]
D CVFO_0707 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CVFO_1504 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CVFO_0364 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CVFO_1410 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CVFO_0451 pgm; phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVFO_1250 pRPS; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CVFO_0369 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CVFO_0399 pfkA; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:ifo00040]
D CVFO_0706 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVFO_1504 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ifo00051]
D CVFO_1366 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CVFO_0451 pgm; phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVFO_1365 gmd; GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CVFO_1364 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CVFO_0399 pfkA; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CVFO_0369 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
C 00052 Galactose metabolism [PATH:ifo00052]
D CVFO_0706 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVFO_0451 pgm; phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVFO_0399 pfkA; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:ifo00500]
D CVFO_0706 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVFO_0451 pgm; phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVFO_0707 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ifo00520]
D CVFO_1445 magZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CVFO_0708 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CVFO_1589 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CVFO_1303 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CVFO_1182 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CVFO_0677 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D CVFO_1033 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D CVFO_1034 nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D CVFO_0579 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CVFO_0196 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CVFO_1265 neuB; N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D CVFO_0451 pgm; phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVFO_0706 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVFO_0707 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CVFO_1366 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CVFO_1365 gmd; GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CVFO_1364 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CVFO_0190 ascD; CDP-4-dehydro-6-deoxyglucose reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:ifo00620]
D CVFO_0874 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVFO_0453 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CVFO_0324 pdhC; pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_0368 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CVFO_1277 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CVFO_0275 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CVFO_0276 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CVFO_1297 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CVFO_0117 maeA; malate dehydrogenase (oxaloacetate-decarboxylating) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CVFO_0535 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CVFO_0536 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CVFO_0534 oadG; oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D CVFO_0147 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CVFO_0443 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ifo00630]
D CVFO_0874 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVFO_1512 gltA; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CVFO_1170 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CVFO_0619 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CVFO_0823 rbcL; ribulose-bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D CVFO_1454 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CVFO_0689 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVFO_0488 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CVFO_1536 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_1535 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CVFO_0820 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:ifo00640]
D CVFO_0874 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_1277 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CVFO_0275 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CVFO_0276 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CVFO_1297 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CVFO_0423 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CVFO_0424 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CVFO_1512 gltA; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CVFO_1170 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:ifo00650]
D CVFO_0838 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CVFO_0536 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CVFO_0626 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CVFO_0439 ilvG; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVFO_0477 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVFO_0440 ilvH; acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ifo00660]
D CVFO_0439 ilvG; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVFO_0477 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVFO_0440 ilvH; acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CVFO_0423 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CVFO_0424 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CVFO_0740 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CVFO_0739 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CVFO_1546 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ifo00562]
D CVFO_0682 suhB; myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ifo00190]
D CVFO_1390 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CVFO_1389 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CVFO_1388 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CVFO_1387 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CVFO_1386 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CVFO_1385 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CVFO_1383 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CVFO_1382 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CVFO_1381 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CVFO_1380 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CVFO_1379 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CVFO_1376 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CVFO_1375 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CVFO_1374 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CVFO_0626 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CVFO_1185 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CVFO_1186 petB; ubiquinol-cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CVFO_1187 petC; ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CVFO_0760 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVFO_1055 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVFO_0467 coxC; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CVFO_0465 coxA; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CVFO_0464 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CVFO_0466 cytochrome c oxidase assembly protein subunit 11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CVFO_0462 cytochrome c oxidase assembly protein subunit 15 K02259 COX15; heme a synthase [EC:1.17.99.9]
D CVFO_0470 ccoN; cytochrome c oxidase cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CVFO_0471 ccoO; cytochrome c oxidase cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CVFO_0473 ccoP; cytochrome c oxidase cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CVFO_1333 atpA; F-type H+-transporting ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CVFO_1331 atpD; F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CVFO_1332 atpG; F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CVFO_1334 atpH; F-type H+-transporting ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CVFO_1330 atpC; F-type H+-transporting ATPase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CVFO_1337 atpB; F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CVFO_1335 atpF; F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CVFO_1336 atpE; F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CVFO_1199 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CVFO_0328 ppk; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ifo00710]
D CVFO_0823 rbcL; ribulose-bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D CVFO_0367 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CVFO_0365 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CVFO_0369 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CVFO_0364 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CVFO_1410 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CVFO_0005 prkB; phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D CVFO_1504 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CVFO_0117 maeA; malate dehydrogenase (oxaloacetate-decarboxylating) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
C 00720 Other carbon fixation pathways [PATH:ifo00720]
D CVFO_0147 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CVFO_0626 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CVFO_0424 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CVFO_0423 sucC; succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CVFO_0942 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CVFO_1170 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CVFO_1277 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CVFO_0275 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CVFO_0276 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CVFO_1297 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CVFO_1558 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CVFO_0532 metF; methylenetetrahydrofolate reductase (NADPH) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CVFO_0874 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ifo00680]
D CVFO_0488 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CVFO_1454 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CVFO_1204 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVFO_0369 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CVFO_0399 pfkA; 6-phosphofructokinase 1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D CVFO_0874 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVFO_1505 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CVFO_0545 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CVFO_0544 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CVFO_0959 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ifo00910]
D CVFO_1006 narK; MFS transporter, NNP family, nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CVFO_0689 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVFO_0106 gltB; glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CVFO_0511 gltD; glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CVFO_1166 cynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ifo00920]
D CVFO_0389 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CVFO_1252 cysQ; 3'(2'), 5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CVFO_0392 aprA; adenylylsulfate reductase, subunit A K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D CVFO_0391 aprB; adenylylsulfate reductase, subunit B K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D CVFO_1148 4Fe-4S ferredoxin K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D CVFO_0131 soxY; sulfur oxidation protein SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D CVFO_0128 conserved hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D CVFO_0129 soxX; sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D CVFO_0130 soxZ; sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D CVFO_0410 soxB; sulfur oxidation protein SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D CVFO_0512 dsrA; intracellular sulfur oxidation protein DsrA K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D CVFO_0513 dsrB; intracellular sulfur oxidation protein DsrB K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D CVFO_0520 dsrL; intracellular sulfur oxidation protein DsrL K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
D CVFO_0518 dsrM; intracellular sulfur oxidation protein DsrM K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D CVFO_0519 dsrK; intracellular sulfur oxidation protein DsrK K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D CVFO_0521 dsrJ; intracellular sulfur oxidation protein DsrJ K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D CVFO_0522 dsrO; intracellular sulfur oxidation protein DsrO K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D CVFO_0523 dsrP; intracellular sulfur oxidation protein DsrP K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D CVFO_1146 sulfide-quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D CVFO_1339 sulfide-quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D CVFO_0302 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CVFO_0287 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CVFO_0070 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ifo00061]
D CVFO_1277 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CVFO_0275 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CVFO_0276 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CVFO_1297 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CVFO_1134 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CVFO_1529 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CVFO_0802 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CVFO_0068 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CVFO_1135 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CVFO_1528 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CVFO_0069 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D CVFO_1124 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CVFO_1074 fabI; enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CVFO_0835 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ifo00071]
D CVFO_0837 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CVFO_0838 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CVFO_0839 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D CVFO_0835 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:ifo00074]
D CVFO_0565 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CVFO_1134 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CVFO_1529 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ifo00561]
D CVFO_0803 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CVFO_0329 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CVFO_0676 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CVFO_1161 dgkA; diacylglycerol kinase (ATP dependent) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:ifo00564]
D CVFO_0093 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CVFO_0329 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CVFO_0676 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CVFO_1161 dgkA; diacylglycerol kinase (ATP dependent) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CVFO_0764 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CVFO_1059 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CVFO_0442 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CVFO_1206 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CVFO_0416 e2.7; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CVFO_0964 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ifo00592]
D CVFO_0837 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ifo00230]
D CVFO_1542 nudE; ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D CVFO_0451 pgm; phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVFO_1250 pRPS; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CVFO_0071 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CVFO_0036 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CVFO_0966 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CVFO_0889 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CVFO_0965 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CVFO_1560 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CVFO_1561 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CVFO_1063 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CVFO_1169 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CVFO_0316 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CVFO_1089 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CVFO_1520 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CVFO_1227 yfiH; conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CVFO_1043 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CVFO_0752 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CVFO_1409 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CVFO_1525 e6.3; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CVFO_1128 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CVFO_0834 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CVFO_0833 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CVFO_0500 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CVFO_1094 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CVFO_1294 adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D CVFO_0398 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CVFO_1087 icc; Icc protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D CVFO_1118 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D CVFO_0389 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:ifo00240]
D CVFO_0724 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CVFO_0722 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CVFO_0049 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CVFO_1181 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CVFO_1191 dihydroorotate dehydrogenase (fumarate) K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CVFO_1400 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CVFO_0078 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CVFO_0252 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CVFO_0969 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CVFO_0752 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CVFO_0480 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CVFO_0589 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CVFO_1089 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CVFO_1520 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CVFO_0834 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CVFO_0833 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CVFO_0635 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CVFO_1418 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CVFO_0558 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CVFO_1143 conserved hypothetical protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ifo00250]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_0320 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CVFO_1394 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CVFO_0741 asnB; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CVFO_1454 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CVFO_0417 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CVFO_0162 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CVFO_1094 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CVFO_1169 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CVFO_0049 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CVFO_0106 gltB; glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CVFO_0511 gltD; glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CVFO_0689 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVFO_0724 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CVFO_0722 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CVFO_0708 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CVFO_0071 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ifo00260]
D CVFO_0295 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CVFO_0337 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CVFO_0182 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CVFO_0181 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CVFO_0488 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CVFO_1454 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CVFO_1505 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CVFO_0545 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CVFO_0544 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CVFO_0959 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CVFO_1536 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_1535 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CVFO_0442 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CVFO_0943 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CVFO_1298 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CVFO_1309 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ifo00270]
D CVFO_0302 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CVFO_1163 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CVFO_0221 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CVFO_1227 yfiH; conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CVFO_0220 aheY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CVFO_0295 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CVFO_0337 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CVFO_0182 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CVFO_0287 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CVFO_0070 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CVFO_0296 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVFO_0056 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CVFO_0043 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_0180 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D CVFO_0545 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CVFO_0544 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ifo00280]
D CVFO_0296 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_0837 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ifo00290]
D CVFO_0943 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CVFO_0740 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CVFO_0739 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CVFO_1546 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CVFO_0439 ilvG; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVFO_0477 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVFO_0440 ilvH; acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CVFO_0441 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CVFO_0861 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CVFO_0296 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVFO_0443 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ifo00300]
D CVFO_0182 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CVFO_0295 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CVFO_0337 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CVFO_0907 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CVFO_1575 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CVFO_0377 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CVFO_0447 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CVFO_0956 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CVFO_1119 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CVFO_1256 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CVFO_0411 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CVFO_0415 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ifo00310]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_1032 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:ifo00220]
D CVFO_0446 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CVFO_0417 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CVFO_0162 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CVFO_0689 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVFO_0724 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CVFO_0722 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_0819 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CVFO_1401 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CVFO_0277 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CVFO_0447 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ifo00330]
D CVFO_0620 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CVFO_0867 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CVFO_1594 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_1032 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:ifo00340]
D CVFO_0578 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CVFO_1095 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CVFO_0896 hisE; phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CVFO_0895 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CVFO_1354 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CVFO_0340 hisH; glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CVFO_0762 cyclase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CVFO_1057 cyclase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CVFO_0339 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CVFO_0334 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_0547 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_0577 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:ifo00350]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_0334 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_0547 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:ifo00360]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_0334 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_0547 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_1032 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ifo00400]
D CVFO_0355 aroG; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CVFO_1214 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CVFO_0274 aroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CVFO_0260 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CVFO_0297 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CVFO_0549 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CVFO_0250 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CVFO_0127 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CVFO_0096 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CVFO_1247 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CVFO_1311 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CVFO_1570 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CVFO_1298 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CVFO_1309 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CVFO_0546 pheA; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CVFO_0548 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_0334 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_0547 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ifo00410]
D CVFO_0537 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CVFO_0949 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ifo00450]
D CVFO_1163 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CVFO_0777 trxB; thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CVFO_0389 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CVFO_0857 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CVFO_1138 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ifo00460]
D CVFO_1394 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CVFO_0488 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ifo00470]
D CVFO_1086 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CVFO_1032 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CVFO_0195 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CVFO_0185 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CVFO_1119 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CVFO_1256 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ifo00480]
D CVFO_0056 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CVFO_0043 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CVFO_1429 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CVFO_0266 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CVFO_1233 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CVFO_0780 gor; glutathione reductase (NADPH) K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D CVFO_0942 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:ifo00540]
D CVFO_1125 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CVFO_0438 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CVFO_1123 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CVFO_1533 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CVFO_1254 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CVFO_1555 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CVFO_1498 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CVFO_1571 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CVFO_1557 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CVFO_0869 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CVFO_0301 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CVFO_0791 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CVFO_0088 eptA; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CVFO_0987 conserved hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ifo00541]
D CVFO_0706 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CVFO_0190 ascD; CDP-4-dehydro-6-deoxyglucose reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D CVFO_1366 manC; mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CVFO_1365 gmd; GDPmannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D CVFO_1364 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CVFO_1303 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CVFO_1265 neuB; N-acetylneuraminate synthase K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D CVFO_0848 capD; polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D CVFO_0850 UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:ifo00550]
D CVFO_0579 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CVFO_0196 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CVFO_0197 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CVFO_0185 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CVFO_0411 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CVFO_0195 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CVFO_0415 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CVFO_0763 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CVFO_1058 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CVFO_0264 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CVFO_0634 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CVFO_0692 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CVFO_0143 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CVFO_0793 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CVFO_1031 dacC; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:ifo00552]
D CVFO_0264 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CVFO_0848 capD; polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ifo00543]
D CVFO_0302 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ifo00730]
D CVFO_0871 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CVFO_0333 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CVFO_0304 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CVFO_1071 thiO; glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D CVFO_0917 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CVFO_1566 thiG; thiamine biosynthesis ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CVFO_0386 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CVFO_0946 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CVFO_0733 rsgA; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CVFO_0398 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ifo00740]
D CVFO_1287 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CVFO_0136 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CVFO_1288 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CVFO_1286 ribE; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CVFO_0289 ribF; riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:ifo00750]
D CVFO_0259 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CVFO_1003 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D CVFO_0544 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CVFO_1115 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CVFO_0564 pdxJ; pyridoxine 5-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CVFO_0181 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ifo00760]
D CVFO_0320 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CVFO_0887 nadA; quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CVFO_1253 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CVFO_1089 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D CVFO_1520 surE; 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CVFO_1230 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CVFO_0845 nadE; NAD+ synthase (glutamine-hydrolysing) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CVFO_0267 CinA domain-containing protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CVFO_1341 ppnK; NAD+ kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:ifo00770]
D CVFO_0439 ilvG; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVFO_0477 ilvB; acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CVFO_0440 ilvH; acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CVFO_0441 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CVFO_0861 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CVFO_0950 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CVFO_0949 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CVFO_1218 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CVFO_0135 coaB; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CVFO_1201 kdtB; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CVFO_0030 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CVFO_0565 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CVFO_0296 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVFO_0537 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ifo00780]
D CVFO_0974 malonyl-CoA O-methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CVFO_0068 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CVFO_1135 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CVFO_1528 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CVFO_1124 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CVFO_1074 fabI; enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CVFO_1562 bioH; pimelyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D CVFO_1563 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CVFO_0618 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CVFO_1190 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CVFO_0691 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CVFO_1160 birA; BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ifo00785]
D CVFO_1111 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CVFO_1112 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CVFO_0453 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D CVFO_0324 pdhC; pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CVFO_1536 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CVFO_1535 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ifo00790]
D CVFO_0356 conserved hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D CVFO_0330 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CVFO_0331 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CVFO_0951 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CVFO_1590 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CVFO_0107 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CVFO_0073 folC; dihydrofolate synthase / folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CVFO_1287 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CVFO_0505 anthranilate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D CVFO_1420 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CVFO_0357 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CVFO_0262 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D CVFO_0924 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CVFO_1133 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CVFO_1018 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CVFO_1012 moaA; molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CVFO_1011 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CVFO_1008 moaE; molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CVFO_0827 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CVFO_1010 moeA; molybdopterin molybdotransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CVFO_1009 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ifo00670]
D CVFO_0107 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CVFO_1558 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CVFO_0488 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CVFO_0966 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CVFO_0316 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CVFO_0161 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CVFO_1536 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CVFO_0558 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CVFO_0820 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CVFO_0532 metF; methylenetetrahydrofolate reductase (NADPH) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CVFO_0313 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ifo00860]
D CVFO_1026 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVFO_0229 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CVFO_1416 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CVFO_0872 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CVFO_0164 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CVFO_0530 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CVFO_1299 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CVFO_0687 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CVFO_0178 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CVFO_0843 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CVFO_0961 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D CVFO_0760 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVFO_1055 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVFO_0462 cytochrome c oxidase assembly protein subunit 15 K02259 COX15; heme a synthase [EC:1.17.99.9]
D CVFO_0524 dsrN; intracellular sulfur oxidation protein DsrN K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CVFO_0092 gpmB; probable phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CVFO_0807 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D CVFO_0808 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ifo00130]
D CVFO_0098 ubiC; chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D CVFO_0375 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CVFO_1349 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D CVFO_0569 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D CVFO_1511 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ifo00900]
D CVFO_0917 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CVFO_1060 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CVFO_0202 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CVFO_1249 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CVFO_0198 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CVFO_0755 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CVFO_1295 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CVFO_0801 ispA; farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CVFO_1436 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CVFO_0763 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CVFO_1058 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ifo00907]
D CVFO_0837 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CVFO_0364 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ifo00332]
D CVFO_0867 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CVFO_1594 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ifo00261]
D CVFO_0389 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CVFO_0295 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CVFO_0337 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CVFO_0907 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CVFO_1575 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ifo00521]
D CVFO_0451 pgm; phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CVFO_0682 suhB; myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:ifo00401]
D CVFO_0548 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_0334 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_0547 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CVFO_0127 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CVFO_0096 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CVFO_1529 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CVFO_1528 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CVFO_1074 fabI; enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CVFO_1134 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ifo00999]
D CVFO_0221 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CVFO_0260 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ifo00362]
D CVFO_0837 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D CVFO_0309 fdx; ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D CVFO_0838 fadN; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CVFO_0536 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D CVFO_0512 dsrA; intracellular sulfur oxidation protein DsrA K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D CVFO_0513 dsrB; intracellular sulfur oxidation protein DsrB K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D CVFO_0520 dsrL; intracellular sulfur oxidation protein DsrL K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
C 00642 Ethylbenzene degradation
D CVFO_0837 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ifo03020]
D CVFO_0125 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CVFO_0126 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CVFO_1466 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CVFO_0878 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ifo03010]
D CVFO_0590 rpsA; small subunit ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CVFO_1503 rpsB; small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CVFO_1485 rpsC; small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CVFO_1467 rpsD; small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CVFO_1474 rpsE; small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CVFO_1082 rpsF; small subunit ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CVFO_1495 rpsG; small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CVFO_1477 rpsH; small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CVFO_0090 rpsI; small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CVFO_1492 rpsJ; small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CVFO_1468 rpsK; small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CVFO_1496 rpsL; small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CVFO_1469 rpsM; small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CVFO_1478 rpsN; small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CVFO_0790 rpsO; small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CVFO_1168 rpsP; small subunit ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CVFO_1482 rpsQ; small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CVFO_1083 rpsR; small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CVFO_1487 rpsS; small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CVFO_0209 rpsT; small subunit ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CVFO_1464 rpsU; small subunit ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CVFO_0122 rplA; large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CVFO_1488 rplB; large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CVFO_1491 rplC; large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CVFO_1490 rplD; large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CVFO_1479 rplE; large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CVFO_1476 rplF; large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CVFO_0124 rplL; large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CVFO_1084 rplI; large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CVFO_0123 rplJ; large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CVFO_0121 rplK; large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CVFO_0089 rplM; large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CVFO_1481 rplN; large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CVFO_1472 rplO; large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CVFO_1484 rplP; large subunit ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CVFO_1465 rplQ; large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CVFO_1475 rplR; large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CVFO_0510 rplS; large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CVFO_0646 rplT; large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CVFO_1531 rplU; large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CVFO_1486 rplV; large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CVFO_1489 rplW; large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CVFO_1480 rplX; large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CVFO_1508 rplY; large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CVFO_1530 rpmA; large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CVFO_1172 rpmB; large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CVFO_1483 rpmC; large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CVFO_1473 rpmD; large subunit ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CVFO_1300 rpmE; large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CVFO_0804 rpmF; large subunit ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CVFO_1171 rpmG; large subunit ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CVFO_1321 rpmH; large subunit ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CVFO_0645 rpmI; large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CVFO_1470 rpmJ; large subunit ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ifo00970]
D CVFO_t31 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CVFO_t04 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CVFO_t16 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVFO_t11 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVFO_t22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVFO_t09 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVFO_t24 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CVFO_t26 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CVFO_t13 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CVFO_t32 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CVFO_t30 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CVFO_t12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CVFO_t06 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CVFO_t23 tRNA-His K14226 tRNA-His; tRNA His
D CVFO_t03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CVFO_t15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVFO_t34 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVFO_t36 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVFO_t25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVFO_t17 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CVFO_t02 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVFO_t01 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVFO_t33 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVFO_t20 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CVFO_t18 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CVFO_t21 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CVFO_t29 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CVFO_t35 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CVFO_t07 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CVFO_t19 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CVFO_t08 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CVFO_t05 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CVFO_t10 tRNA-Val K14237 tRNA-Val; tRNA Val
D CVFO_t27 tRNA-Val K14237 tRNA-Val; tRNA Val
D CVFO_1026 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVFO_1211 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CVFO_1210 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CVFO_1212 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CVFO_0986 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CVFO_0711 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CVFO_0886 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CVFO_0219 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CVFO_0238 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CVFO_0643 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CVFO_0064 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CVFO_1548 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CVFO_1138 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CVFO_0161 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CVFO_1041 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CVFO_1192 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CVFO_1215 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CVFO_0587 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CVFO_0383 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CVFO_1207 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CVFO_0484 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CVFO_0648 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CVFO_0649 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CVFO_1595 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CVFO_1217 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ifo03060]
D CVFO_1471 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CVFO_0119 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CVFO_1604 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CVFO_0066 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CVFO_0067 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CVFO_0065 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CVFO_1324 yidC; conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVFO_1183 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CVFO_0575 ffh; signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CVFO_0170 ftsY; fused signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D CVFO_0897 tatA; sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CVFO_0898 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CVFO_0899 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D CVFO_0551 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CVFO_1072 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ifo04122]
D CVFO_0304 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CVFO_0688 tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CVFO_1412 tusA; tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CVFO_0516 dsrH; intracellular sulfur oxidation protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D CVFO_0515 dsrF; intracellular sulfur oxidation protein DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D CVFO_0514 dsrE; intracellular sulfur oxidation protein DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D CVFO_0550 tusE; tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D CVFO_0211 mnmA; tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CVFO_0714 trmU; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CVFO_1008 moaE; molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CVFO_1012 moaA; molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CVFO_1013 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D CVFO_0656 moeB; adenylyltransferase and sulfurtransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CVFO_1011 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CVFO_0827 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CVFO_0720 thiS; sulfur carrier protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:ifo03018]
D CVFO_0183 nudH; putative (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CVFO_0261 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CVFO_1204 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVFO_0457 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CVFO_1271 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CVFO_1093 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CVFO_0349 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CVFO_1020 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CVFO_1202 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVFO_1131 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVFO_0328 ppk; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CVFO_1017 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ifo03030]
D CVFO_0879 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVFO_0133 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVFO_1035 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVFO_1417 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVFO_1593 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVFO_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVFO_1085 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CVFO_0792 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CVFO_0497 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CVFO_0742 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CVFO_0382 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVFO_0905 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ifo03410]
D CVFO_0343 nTH; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CVFO_1002 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CVFO_0288 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CVFO_1224 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CVFO_0077 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CVFO_0382 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVFO_1069 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CVFO_0905 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ifo03420]
D CVFO_0109 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CVFO_0968 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CVFO_0925 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CVFO_0581 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CVFO_0382 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVFO_0905 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ifo03430]
D CVFO_0344 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CVFO_0207 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CVFO_0800 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CVFO_1069 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CVFO_0497 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CVFO_0133 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVFO_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVFO_1035 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVFO_1593 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVFO_1417 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVFO_0879 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVFO_0905 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ifo03440]
D CVFO_1069 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CVFO_0497 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CVFO_0563 recO; DNA repair protein RecO (recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O)
D CVFO_1037 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CVFO_0137 recA; recombination protein RecA K03553 recA; recombination protein RecA
D CVFO_0382 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVFO_0738 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CVFO_0231 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CVFO_0244 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CVFO_0099 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CVFO_0133 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVFO_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVFO_1035 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVFO_1593 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVFO_1417 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVFO_0879 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVFO_1280 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ifo02010]
D CVFO_0817 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CVFO_0818 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D CVFO_0816 afuC; iron(III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CVFO_0580 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CVFO_0973 znuA; zinc transport system substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CVFO_0227 znuB; zinc transport system permease protein K09816 znuB; zinc transport system permease protein
D CVFO_0381 znuC; zinc transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CVFO_0542 lolC; lipoprotein-releasing ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CVFO_0541 lolD; lipoprotein-releasing ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CVFO_1079 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D CVFO_0222 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D CVFO_0223 ccmA; heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CVFO_1019 lptF; lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein
D CVFO_1524 lptG; lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein
D CVFO_1158 lptB; lipopolysaccharide export system ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CVFO_0479 msbA; ATP-binding cassette, subfamily B, bacterial MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CVFO_0140 ABC transporter ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CVFO_0979 lapB; ABC transporter ATP-binding protein/permease LapB K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:ifo03070]
D CVFO_0298 conserved hypothetical protein K12340 tolC; outer membrane protein
D CVFO_0066 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CVFO_0067 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CVFO_0119 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CVFO_1604 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CVFO_1471 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CVFO_0065 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CVFO_1324 yidC; conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVFO_1183 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CVFO_0170 ftsY; fused signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D CVFO_0575 ffh; signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CVFO_0897 tatA; sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CVFO_0898 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CVFO_0899 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ifo02020]
D CVFO_0462 cytochrome c oxidase assembly protein subunit 15 K02259 COX15; heme a synthase [EC:1.17.99.9]
D CVFO_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CVFO_0058 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D CVFO_0059 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D CVFO_1022 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CVFO_0689 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVFO_1185 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CVFO_1186 petB; ubiquinol-cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CVFO_1187 petC; ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CVFO_0470 ccoN; cytochrome c oxidase cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CVFO_0471 ccoO; cytochrome c oxidase cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CVFO_0473 ccoP; cytochrome c oxidase cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CVFO_0298 conserved hypothetical protein K12340 tolC; outer membrane protein
D CVFO_1497 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CVFO_1185 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ifo02024]
D CVFO_0127 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CVFO_0096 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CVFO_0355 aroG; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CVFO_0835 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CVFO_0136 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CVFO_1324 yidC; conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVFO_0119 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CVFO_1604 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CVFO_1471 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CVFO_0065 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CVFO_1183 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CVFO_0170 ftsY; fused signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D CVFO_0575 ffh; signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D CVFO_1251 sIG1; RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CVFO_1204 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ifo01501]
D CVFO_1446 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CVFO_1445 magZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CVFO_0298 conserved hypothetical protein K12340 tolC; outer membrane protein
D CVFO_0143 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CVFO_0793 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ifo01502]
D CVFO_0195 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CVFO_1086 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CVFO_0415 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CVFO_0634 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CVFO_0692 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ifo01503]
D CVFO_0088 eptA; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CVFO_0526 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CVFO_0332 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CVFO_0298 conserved hypothetical protein K12340 tolC; outer membrane protein
D CVFO_1125 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ifo01000]
C 01001 Protein kinases [BR:ifo01001]
D CVFO_0058 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ifo01009]
D CVFO_0220 aheY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CVFO_0684 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CVFO_0959 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ifo01002]
D CVFO_1072 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CVFO_1525 e6.3; GMP synthase (glutamine-hydrolysing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CVFO_0071 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CVFO_0106 gltB; glutamate synthase (NADPH/NADH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CVFO_0708 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CVFO_0741 asnB; asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CVFO_0266 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CVFO_1137 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D CVFO_0173 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D CVFO_0174 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D CVFO_1429 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CVFO_0956 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CVFO_0884 map; methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CVFO_1246 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CVFO_1591 ftsH; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CVFO_0883 peptidase M48 family protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D CVFO_1411 peptidase M48, Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D CVFO_1121 rseP; regulator of sigma E protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CVFO_1031 dacC; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CVFO_0019 clpP; ATP-dependent Clp protease, protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CVFO_0022 lon; ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CVFO_0551 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CVFO_0554 prcEC:3.4.21.102; carboxyl-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CVFO_0224 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D CVFO_0916 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CVFO_1350 pmbA; PmbA protein K03592 pmbA; PmbA protein
D CVFO_1391 tldD; peptidase U62, modulator of DNA gyrase K03568 tldD; TldD protein
D CVFO_1096 hflC; membrane protease subunit HflC K04087 hflC; modulator of FtsH protease HflC
D CVFO_1097 hflK; membrane protease subunit HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ifo01005]
D CVFO_1125 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CVFO_1254 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CVFO_0438 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CVFO_1123 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CVFO_1533 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CVFO_1555 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CVFO_0301 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CVFO_0791 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CVFO_0869 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CVFO_0088 eptA; phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CVFO_1571 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CVFO_1557 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CVFO_1498 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CVFO_0987 conserved hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D CVFO_0849 wbqP; O-antigen biosynthesis protein WbqP K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ifo01011]
D CVFO_0579 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CVFO_0196 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CVFO_0197 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CVFO_0185 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CVFO_0411 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CVFO_0195 ddl; D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CVFO_1086 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CVFO_0634 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CVFO_0692 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CVFO_0264 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CVFO_1126 mviN; virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D CVFO_0143 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CVFO_0793 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CVFO_1031 dacC; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CVFO_0047 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CVFO_1030 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CVFO_0192 mltD; membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CVFO_1419 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CVFO_0526 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CVFO_1326 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ifo01004]
D CVFO_1529 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CVFO_0802 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CVFO_0068 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CVFO_1135 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CVFO_1528 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CVFO_0069 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D CVFO_1124 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CVFO_1074 fabI; enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CVFO_0874 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CVFO_0835 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CVFO_0803 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CVFO_0329 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CVFO_0676 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ifo01006]
D CVFO_0801 ispA; farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CVFO_1436 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CVFO_0763 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CVFO_1058 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CVFO_0189 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CVFO_0375 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CVFO_0760 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVFO_1055 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ifo01007]
D CVFO_1026 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVFO_0986 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CVFO_1595 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CVFO_1217 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CVFO_1548 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CVFO_0383 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CVFO_1138 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CVFO_1215 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CVFO_1041 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CVFO_1192 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CVFO_0587 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CVFO_0886 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CVFO_0484 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CVFO_0219 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CVFO_0238 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CVFO_0064 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CVFO_1207 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CVFO_0643 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CVFO_0711 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CVFO_0648 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CVFO_0649 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CVFO_0926 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CVFO_0285 alaC; alanine-synthesizing transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CVFO_0334 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_0547 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CVFO_1563 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CVFO_0447 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CVFO_0618 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CVFO_1416 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CVFO_1032 dat; D-alanine transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CVFO_0296 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CVFO_1454 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D CVFO_0544 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ifo00194]
D CVFO_1330 atpC; F-type H+-transporting ATPase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CVFO_1331 atpD; F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CVFO_1332 atpG; F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CVFO_1333 atpA; F-type H+-transporting ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CVFO_1334 atpH; F-type H+-transporting ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CVFO_1335 atpF; F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CVFO_1336 atpE; F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CVFO_1337 atpB; F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ifo03000]
D CVFO_1164 metR; LysR family transcriptional regulator, regulator for metE and metH K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D CVFO_0784 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CVFO_0822 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D CVFO_0226 fur; Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CVFO_0303 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CVFO_1160 birA; BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CVFO_0317 fis; Fis family transcriptional regulator, factor for inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CVFO_0718 conserved hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CVFO_0191 bolA; BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CVFO_0552 parB; chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CVFO_0937 alpA; prophage regulatory protein K07733 alpA; prophage regulatory protein
D CVFO_0945 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CVFO_0796 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ifo03021]
D CVFO_1466 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CVFO_0125 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CVFO_0126 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CVFO_0878 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CVFO_1251 sIG1; RNA polymerase primary sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D CVFO_1129 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D CVFO_0041 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D CVFO_1289 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CVFO_0120 nusG; transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D CVFO_1188 sspA; RNA polymerase-associated protein K03599 sspA; stringent starvation protein A
D CVFO_1189 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D CVFO_0452 rseC; sigma-E factor negative regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D CVFO_0945 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CVFO_0725 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CVFO_1020 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ifo03019]
D CVFO_0261 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CVFO_0561 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CVFO_1093 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CVFO_1248 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CVFO_1271 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CVFO_0349 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CVFO_1204 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVFO_0457 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CVFO_1020 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CVFO_1202 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVFO_1131 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVFO_0328 ppk; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CVFO_1017 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CVFO_0183 nudH; putative (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
C 03041 Spliceosome
C 03011 Ribosome [BR:ifo03011]
D CVFO_0590 rpsA; small subunit ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CVFO_1503 rpsB; small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CVFO_1485 rpsC; small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CVFO_1467 rpsD; small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CVFO_1474 rpsE; small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CVFO_1082 rpsF; small subunit ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CVFO_1495 rpsG; small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CVFO_1477 rpsH; small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CVFO_0090 rpsI; small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CVFO_1492 rpsJ; small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CVFO_1468 rpsK; small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CVFO_1496 rpsL; small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CVFO_1469 rpsM; small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CVFO_1478 rpsN; small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CVFO_0790 rpsO; small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CVFO_1168 rpsP; small subunit ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CVFO_1482 rpsQ; small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CVFO_1083 rpsR; small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CVFO_1487 rpsS; small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CVFO_0209 rpsT; small subunit ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CVFO_1464 rpsU; small subunit ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CVFO_0122 rplA; large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CVFO_1488 rplB; large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CVFO_1491 rplC; large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CVFO_1490 rplD; large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CVFO_1479 rplE; large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CVFO_1476 rplF; large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CVFO_1084 rplI; large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CVFO_0123 rplJ; large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CVFO_0121 rplK; large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CVFO_0124 rplL; large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CVFO_0089 rplM; large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CVFO_1481 rplN; large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CVFO_1472 rplO; large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CVFO_1484 rplP; large subunit ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CVFO_1465 rplQ; large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CVFO_1475 rplR; large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CVFO_0510 rplS; large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CVFO_0646 rplT; large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CVFO_1531 rplU; large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CVFO_1486 rplV; large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CVFO_1489 rplW; large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CVFO_1480 rplX; large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CVFO_1530 rpmA; large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CVFO_1172 rpmB; large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CVFO_1483 rpmC; large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CVFO_1473 rpmD; large subunit ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CVFO_1300 rpmE; large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CVFO_0804 rpmF; large subunit ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CVFO_1171 rpmG; large subunit ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CVFO_1321 rpmH; large subunit ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CVFO_0645 rpmI; large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CVFO_1470 rpmJ; large subunit ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CVFO_1508 rplY; large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:ifo03009]
D CVFO_0561 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CVFO_1248 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D CVFO_0562 era; GTP-binding protein Era K03595 era; GTPase
D CVFO_0868 obg; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D CVFO_0945 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D CVFO_0041 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D CVFO_1289 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CVFO_0120 nusG; transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG
D CVFO_1116 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CVFO_0915 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D CVFO_1200 rsmD; 16S rRNA (guanine966-N2)-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CVFO_0371 gidB; 16S rRNA (guanine527-N7)-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CVFO_0795 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CVFO_0032 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CVFO_1100 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CVFO_1435 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D CVFO_0753 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CVFO_1449 rumA; 23S rRNA (uracil1939-C5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CVFO_1216 rluB; 23S rRNA pseudouridine2605 synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CVFO_0374 rluC; 23S rRNA pseudouridine955/2504/2580 synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CVFO_1228 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CVFO_1167 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CVFO_0261 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CVFO_0048 ruvX; putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CVFO_0314 dbpA; ATP-independent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D CVFO_0349 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CVFO_0733 rsgA; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CVFO_0482 engA; GTP-binding protein K03977 engA; GTPase
D CVFO_0021 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D CVFO_0686 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CVFO_0500 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CVFO_0039 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CVFO_0042 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D CVFO_1231 ybeB; ribosome-associated protein K09710 ybeB; ribosome-associated protein
D CVFO_1279 ybeY; conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D CVFO_1255 yhbY; RNA-binding protein K07574 yhbY; RNA-binding protein
D CVFO_0449 yhbH; putative sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D CVFO_1506 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CVFO_0805 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ifo03016]
D CVFO_1457 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CVFO_1026 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVFO_1207 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CVFO_1215 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CVFO_1192 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CVFO_1138 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CVFO_0986 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D CVFO_0383 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CVFO_0587 lysS; lysyl-tRNA synthetase, class II K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CVFO_0886 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CVFO_0711 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CVFO_0643 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CVFO_0064 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CVFO_1548 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CVFO_1041 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CVFO_0484 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CVFO_0648 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CVFO_0649 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CVFO_1595 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CVFO_1217 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CVFO_0239 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CVFO_0700 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CVFO_0075 trmB; tRNA (guanine-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CVFO_1162 truA; tRNA pseudouridine38-40 synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CVFO_0038 truB; tRNA pseudouridine55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CVFO_0304 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CVFO_0686 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CVFO_0189 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CVFO_0057 mnmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CVFO_0370 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CVFO_0857 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CVFO_1252 cysQ; 3'(2'), 5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CVFO_1322 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CVFO_1534 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D CVFO_1198 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CVFO_0219 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CVFO_0238 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CVFO_1526 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CVFO_0436 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D CVFO_0215 miaB; bifunctional enzyme involved in thiolation and methylation of tRNA K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CVFO_0097 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CVFO_0972 cmoB; tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D CVFO_0955 trmD; tRNA (guanine37-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CVFO_0683 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D CVFO_0158 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CVFO_0211 mnmA; tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CVFO_0714 trmU; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CVFO_0300 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CVFO_0688 tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CVFO_1412 tusA; tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CVFO_0516 dsrH; intracellular sulfur oxidation protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D CVFO_0515 dsrF; intracellular sulfur oxidation protein DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D CVFO_0514 dsrE; intracellular sulfur oxidation protein DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D CVFO_0550 tusE; tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D CVFO_0306 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D CVFO_1220 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D CVFO_1133 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CVFO_0357 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CVFO_0924 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CVFO_1018 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CVFO_0856 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CVFO_0141 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CVFO_1278 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CVFO_1080 yeaZ; peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CVFO_1157 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CVFO_0527 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CVFO_0086 UBA/THIF-type NAD/FAD-binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CVFO_1093 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CVFO_0457 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ifo03012]
D CVFO_0040 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CVFO_0644 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CVFO_1502 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CVFO_0118 elongation factor Tu K02358 tuf; elongation factor Tu
D CVFO_1493 elongation factor Tu K02358 tuf; elongation factor Tu
D CVFO_1494 fusA; elongation factor G K02355 fusA; elongation factor G
D CVFO_0228 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CVFO_0970 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CVFO_0153 hemK; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CVFO_1507 pth; peptidyl-tRNA hydrolase, PTH1 family K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CVFO_0533 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CVFO_0422 efp; elongation factor P K02356 efp; elongation factor P
D CVFO_0421 poxA; lysyl-tRNA synthetase, class II K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D CVFO_1236 kamA; lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D CVFO_0636 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ifo03110]
D CVFO_1522 ATP-dependent Clp protease ATP-binding subunit ClpA, N-terminal K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CVFO_0157 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CVFO_0020 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CVFO_0684 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CVFO_1202 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVFO_0308 hscA; molecular chaperone HscA K04044 hscA; molecular chaperone HscA
D CVFO_1131 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVFO_1203 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CVFO_0307 hscB; molecular chaperone HscB K04082 hscB; molecular chaperone HscB
D CVFO_0881 hslO; molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D CVFO_1342 gRPE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CVFO_0923 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D CVFO_1130 groES; chaperonin GroES K04078 groES; chaperonin GroES
D CVFO_1591 ftsH; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CVFO_1337 atpB; F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CVFO_0213 conserved hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CVFO_1532 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CVFO_1075 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CVFO_1065 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CVFO_1296 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D CVFO_0394 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CVFO_1099 surA; peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CVFO_0243 thioredoxin K03671 TXN; thioredoxin
D CVFO_1021 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D CVFO_0094 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D CVFO_1545 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D CVFO_0914 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D CVFO_0332 dsbA; thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D CVFO_1430 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CVFO_0273 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D CVFO_1077 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ifo04131]
D CVFO_0752 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CVFO_0365 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CVFO_0368 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CVFO_0684 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ifo03051]
D CVFO_0684 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ifo03032]
D CVFO_0742 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CVFO_0751 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVFO_1076 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVFO_0650 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CVFO_0591 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CVFO_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CVFO_1085 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CVFO_0792 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CVFO_0497 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CVFO_0133 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVFO_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVFO_1593 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVFO_1417 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVFO_0879 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVFO_1035 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVFO_0382 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVFO_0905 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CVFO_0963 hda; DnaA-homolog protein K10763 hda; DnaA-homolog protein
D CVFO_0354 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CVFO_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CVFO_0358 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CVFO_1132 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CVFO_1318 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ifo03036]
D CVFO_0561 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CVFO_0751 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVFO_1076 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVFO_0650 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CVFO_0591 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CVFO_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D CVFO_0317 fis; Fis family transcriptional regulator, factor for inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CVFO_0437 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CVFO_0203 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D CVFO_0793 ftsI; cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CVFO_0776 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CVFO_0194 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CVFO_0693 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CVFO_0526 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CVFO_0237 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CVFO_0146 rod shape-determining protein MreB and related proteins K03569 mreB; rod shape-determining protein MreB and related proteins
D CVFO_0145 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CVFO_0144 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CVFO_1029 rodA; rod shape determining protein RodA K05837 rodA; rod shape determining protein RodA
D CVFO_0553 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D CVFO_0552 parB; chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CVFO_0358 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CVFO_1132 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CVFO_0370 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CVFO_0371 gidB; 16S rRNA (guanine527-N7)-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CVFO_0685 xerC; integrase/recombinase XerC K03733 xerC; integrase/recombinase XerC
D CVFO_0509 xerD; integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D CVFO_1139 mrp; ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CVFO_0412 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CVFO_0015 engB; GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ifo03400]
D CVFO_1329 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CVFO_1002 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CVFO_0288 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CVFO_0343 nTH; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CVFO_0055 mutT; 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CVFO_1224 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CVFO_0077 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CVFO_1069 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CVFO_0905 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CVFO_0382 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CVFO_0968 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CVFO_0925 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CVFO_0581 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CVFO_0125 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CVFO_0126 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CVFO_1466 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CVFO_0878 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CVFO_0109 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CVFO_0344 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CVFO_0207 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CVFO_0800 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CVFO_0133 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CVFO_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CVFO_1593 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CVFO_1417 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CVFO_0879 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CVFO_1035 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CVFO_0497 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CVFO_0137 recA; recombination protein RecA K03553 recA; recombination protein RecA
D CVFO_0738 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CVFO_0231 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CVFO_0244 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CVFO_1280 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CVFO_0490 sms; DNA repair protein RadA/Sms K04485 radA; DNA repair protein RadA/Sms
D CVFO_0099 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CVFO_0563 recO; DNA repair protein RecO (recombination protein O) K03584 recO; DNA repair protein RecO (recombination protein O)
D CVFO_1037 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CVFO_1340 recN; DNA repair protein RecN (Recombination protein N) K03631 recN; DNA repair protein RecN (Recombination protein N)
D CVFO_0354 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CVFO_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CVFO_1318 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CVFO_0751 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVFO_1076 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D CVFO_0317 fis; Fis family transcriptional regulator, factor for inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D CVFO_0650 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CVFO_0591 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CVFO_0138 recX; regulatory protein RecX K03565 recX; regulatory protein
D CVFO_0929 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D CVFO_1437 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D CVFO_0834 nrdA; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CVFO_0833 nrdB; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ifo03029]
D CVFO_1186 petB; ubiquinol-cytochrome c reductase cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CVFO_0040 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CVFO_0644 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CVFO_1502 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CVFO_0118 elongation factor Tu K02358 tuf; elongation factor Tu
D CVFO_1493 elongation factor Tu K02358 tuf; elongation factor Tu
D CVFO_1494 fusA; elongation factor G K02355 fusA; elongation factor G
D CVFO_0562 era; GTP-binding protein Era K03595 era; GTPase
D CVFO_1595 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CVFO_1192 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CVFO_0886 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CVFO_0383 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CVFO_1211 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CVFO_1210 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CVFO_1212 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CVFO_0497 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CVFO_1122 yaeT; conserved hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D CVFO_1202 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVFO_1342 gRPE; molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CVFO_1131 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVFO_1130 groES; chaperonin GroES K04078 groES; chaperonin GroES
D CVFO_1203 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CVFO_0304 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CVFO_0307 hscB; molecular chaperone HscB K04082 hscB; molecular chaperone HscB
D CVFO_0914 grxD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D CVFO_1139 mrp; ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CVFO_0760 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVFO_1055 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CVFO_0466 cytochrome c oxidase assembly protein subunit 11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CVFO_0462 cytochrome c oxidase assembly protein subunit 15 K02259 COX15; heme a synthase [EC:1.17.99.9]
D CVFO_1324 yidC; conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVFO_0469 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D CVFO_0214 conserved hypothetical protein K07152 SCO1; protein SCO1
D CVFO_0684 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ifo02000]
D CVFO_0479 msbA; ATP-binding cassette, subfamily B, bacterial MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CVFO_0140 ABC transporter ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CVFO_0979 lapB; ABC transporter ATP-binding protein/permease LapB K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CVFO_0583 uup; ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CVFO_0817 afuA; iron(III) transport system substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CVFO_0818 afuB; iron(III) transport system permease protein K02011 afuB; iron(III) transport system permease protein
D CVFO_0816 afuC; iron(III) transport system ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CVFO_0580 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D CVFO_0973 znuA; zinc transport system substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CVFO_0227 znuB; zinc transport system permease protein K09816 znuB; zinc transport system permease protein
D CVFO_0381 znuC; zinc transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CVFO_1019 lptF; lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein
D CVFO_1524 lptG; lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein
D CVFO_1158 lptB; lipopolysaccharide export system ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CVFO_0542 lolC; lipoprotein-releasing ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D CVFO_0541 lolD; lipoprotein-releasing ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CVFO_1079 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D CVFO_0222 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D CVFO_0223 ccmA; heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CVFO_0326 antibiotic transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CVFO_0325 antibiotic transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CVFO_1006 narK; MFS transporter, NNP family, nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CVFO_1446 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CVFO_0903 ammonium transporter, Amt family K03320 amt; ammonium transporter, Amt family
D CVFO_1233 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CVFO_1188 sspA; RNA polymerase-associated protein K03599 sspA; stringent starvation protein A
D CVFO_0184 TEGT family carrier/transport protein K19416 yccA; modulator of FtsH protease
D CVFO_0216 ynaI; small-conductance mechanosensitive channel, MscS family K16052 ynaI; MscS family membrane protein
D CVFO_0450 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D CVFO_0233 tolQ; biopolymer transport protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D CVFO_0234 tolR; biopolymer transport protein TolR K03560 tolR; biopolymer transport protein TolR
D CVFO_0044 crcB; CrcB protein K06199 crcB; fluoride exporter
D CVFO_1205 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CVFO_0298 conserved hypothetical protein K12340 tolC; outer membrane protein
D CVFO_0982 OMF family outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D CVFO_1122 yaeT; conserved hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D CVFO_0906 nlpB; lipoprotein-34 K07287 bamC; outer membrane protein assembly factor BamC
D CVFO_0499 comL; conserved hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D CVFO_0225 smpA; small protein A K06186 bamE; outer membrane protein assembly factor BamE
D CVFO_0388 lptA; lipopolysaccharide export system protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D CVFO_1098 lptD; LPS-assembly protein K04744 lptD; LPS-assembly protein
D CVFO_1592 lptE; LPS-assembly lipoprotein K03643 lptE; LPS-assembly lipoprotein
D CVFO_1352 corC; magnesium and cobalt transporter K06189 corC; hemolysin (HlyC) family protein
D CVFO_0528 yrbG; cation:H+ antiporter K07301 yrbG; cation:H+ antiporter
D CVFO_1438 trkH; trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D CVFO_1439 trkA; trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D CVFO_0179 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D CVFO_1126 mviN; virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D CVFO_0693 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D CVFO_0503 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D CVFO_0502 tolB; TolB protein K03641 tolB; TolB protein
D CVFO_0396 hppA; K(+)-stimulated pyrophosphate-energized sodium pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D CVFO_0536 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D CVFO_0535 oadA; oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D CVFO_0534 oadG; oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D CVFO_0978 lapC; membrane fusion protein LapC K12542 lapC; membrane fusion protein, adhesin transport system
D CVFO_0958 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:ifo02044]
D CVFO_0298 conserved hypothetical protein K12340 tolC; outer membrane protein
D CVFO_0979 lapB; ABC transporter ATP-binding protein/permease LapB K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D CVFO_0978 lapC; membrane fusion protein LapC K12542 lapC; membrane fusion protein, adhesin transport system
D CVFO_0982 OMF family outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D CVFO_0635 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CVFO_1430 dsbC; thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CVFO_1183 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CVFO_0066 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CVFO_0119 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CVFO_0067 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CVFO_1604 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CVFO_1471 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CVFO_0575 ffh; signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CVFO_0170 ftsY; fused signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D CVFO_0065 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CVFO_1324 yidC; conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CVFO_0897 tatA; sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D CVFO_0898 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CVFO_0899 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ifo02042]
D CVFO_1205 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:ifo02022]
D CVFO_0058 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D CVFO_0059 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D CVFO_0900 nasT; response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ifo04812]
D CVFO_0146 rod shape-determining protein MreB and related proteins K03569 mreB; rod shape-determining protein MreB and related proteins
D CVFO_0437 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CVFO_0237 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CVFO_0553 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D CVFO_0552 parB; chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ifo04147]
D CVFO_0684 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CVFO_1204 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CVFO_0365 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CVFO_0367 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CVFO_0368 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CVFO_1547 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CVFO_1131 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CVFO_1202 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CVFO_0707 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CVFO_1043 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CVFO_0118 elongation factor Tu K02358 tuf; elongation factor Tu
D CVFO_1493 elongation factor Tu K02358 tuf; elongation factor Tu
D CVFO_0700 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CVFO_0835 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CVFO_0220 aheY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CVFO_0398 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CVFO_0162 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CVFO_0417 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CVFO_0689 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CVFO_0872 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CVFO_0545 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CVFO_0316 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CVFO_0323 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 02048 Prokaryotic defense system [BR:ifo02048]
D CVFO_1068 hsdS; type I restriction enzyme, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CVFO_1316 type II restriction enzyme K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D CVFO_1176 mazF; mRNA interferase K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CVFO_1177 mazE; antitoxin K07172 mazE; antitoxin MazE
D CVFO_0718 conserved hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CVFO_0672 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D CVFO_0664 addiction module antitoxin K18923 stbD; antitoxin StbD
D CVFO_0361 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D CVFO_0362 transcription regulator K07746 parD1_3_4; antitoxin ParD1/3/4
D CVFO_0146 rod shape-determining protein MreB and related proteins K03569 mreB; rod shape-determining protein MreB and related proteins
D CVFO_0358 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CVFO_1132 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CVFO_1026 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CVFO_0304 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ifo01504]
D CVFO_0353 pentapeptide repeat-containing protein K18555 qnr; fluoroquinolone resistance protein
D CVFO_0298 conserved hypothetical protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ifo03100]
D CVFO_t31 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CVFO_t04 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CVFO_t16 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVFO_t11 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVFO_t22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVFO_t09 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CVFO_t24 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CVFO_t26 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CVFO_t13 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CVFO_t32 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CVFO_t30 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CVFO_t12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CVFO_t06 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CVFO_t23 tRNA-His K14226 tRNA-His; tRNA His
D CVFO_t03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CVFO_t15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVFO_t34 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVFO_t36 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVFO_t25 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CVFO_t17 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CVFO_t02 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVFO_t01 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVFO_t33 tRNA-Met K14230 tRNA-Met; tRNA Met
D CVFO_t20 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CVFO_t18 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CVFO_t21 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CVFO_t29 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CVFO_t35 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CVFO_t07 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CVFO_t19 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CVFO_t08 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CVFO_t05 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CVFO_t10 tRNA-Val K14237 tRNA-Val; tRNA Val
D CVFO_t27 tRNA-Val K14237 tRNA-Val; tRNA Val
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CVFO_0655 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CVFO_1458 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CVFO_0570 peroxiredoxin Q/BCP K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CVFO_1234 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CVFO_0322 pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CVFO_1257 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CVFO_0557 lgt; phosphatidylglycerol:prolipoprotein diacylglycerol transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CVFO_0046 apbE; thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CVFO_1209 ydiU; conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CVFO_0709 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CVFO_0087 TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CVFO_0373 TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CVFO_0319 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CVFO_0108 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D CVFO_0428 rnfD; electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CVFO_0429 rnfC; electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CVFO_0430 rnfB; electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CVFO_1301 Cu2+-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D CVFO_0832 ferredoxin K11107 yfaE; ferredoxin
D CVFO_0427 rnfG; electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CVFO_0155 rnfE; electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CVFO_0431 rnfA; electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CVFO_0305 iscU; nitrogen fixation protein NifU and related proteins K04488 iscU; nitrogen fixation protein NifU and related proteins
D CVFO_0825 cbbO; Rubisco regulator CbbO K02448 norD; nitric oxide reductase NorD protein
D CVFO_0824 cbbQ; Rubisco regulator CbbQ K04748 norQ; nitric oxide reductase NorQ protein
D CVFO_0458 conserved hypothetical protein K02570 napD; periplasmic nitrate reductase NapD
D CVFO_0517 intracellular sulfur oxidation protein DsrC K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D CVFO_0989 glycosyl transferase, family 25 K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D CVFO_1509 ubiB; ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D CVFO_1510 yigP; conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CVFO_0347 cspA; cold shock protein K03704 cspA; cold shock protein
D CVFO_0999 cold shock protein K03704 cspA; cold shock protein
D CVFO_0904 nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2
D CVFO_0909 nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
C 99975 Protein processing
D CVFO_0018 tig; trigger factor K03545 tig; trigger factor
D CVFO_0750 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CVFO_1569 yhfA; OsmC family protein K07397 yhfA; putative redox protein
D CVFO_0948 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D CVFO_0678 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CVFO_0033 yraN; endonuclease K07460 yraN; putative endonuclease
D CVFO_1040 endonuclease K07461 K07461; putative endonuclease
D CVFO_0045 ycaJ; putative ATPase K07478 ycaJ; putative ATPase
D CVFO_0256 IS3/IS911 family transposase orfA K07483 K07483; transposase
D CVFO_0704 IS3/IS911 family transposase orfA K07483 K07483; transposase
D CVFO_0757 IS3/IS911 family transposase orfA K07483 K07483; transposase
D CVFO_0829 IS3/IS911 family transposase orfA K07483 K07483; transposase
D CVFO_1267 IS3/IS911 family transposase orfA K07483 K07483; transposase
D CVFO_1443 IS3/IS911 family transposase orfA K07483 K07483; transposase
D CVFO_0026 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0053 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0081 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0283 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0405 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0434 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0487 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0506 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0628 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0641 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0680 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0694 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0698 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0703 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0736 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0758 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0771 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0876 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0891 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0911 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0920 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0952 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_0991 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1024 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1046 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1154 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1196 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1259 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1283 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1292 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1356 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1442 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1455 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1552 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
D CVFO_1598 IS3/IS911 family transposase orfB K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CVFO_0063 pspE; phage shock protein E K03972 pspE; phage shock protein E
D CVFO_1036 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CVFO_1274 tC.P; inorganic phosphate transporter, PiT family K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D CVFO_1537 ispZ; intracellular septation protein K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D CVFO_1434 typA; GTP-binding protein K06207 typA; GTP-binding protein
D CVFO_1042 ygiM; SH3 domain protein K07184 ygiM; SH3 domain protein
C 99992 Structural proteins
D CVFO_0775 lolA; outer membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D CVFO_0230 conserved hypothetical protein K02494 lolB; outer membrane lipoprotein LolB
D CVFO_0723 vacJ; lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CVFO_0647 slyB; outer membrane lipoprotein SlyB K06077 slyB; outer membrane lipoprotein SlyB
D CVFO_0217 conserved hypothetical protein K06194 nlpD; lipoprotein NlpD
D CVFO_1078 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D CVFO_0584 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D CVFO_0957 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D CVFO_1117 apaG; ApaG protein K06195 apaG; ApaG protein
D CVFO_0811 iron-regulated protein A K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CVFO_0278 erpA; iron-sulfur cluster insertion protein K15724 erpA; iron-sulfur cluster insertion protein
D CVFO_0074 fxsA; conserved hypothetical protein K07113 fxsA; UPF0716 protein FxsA
D CVFO_0210 hflD; high frequency lysogenization protein K07153 hflD; high frequency lysogenization protein
D CVFO_0882 lemA; LemA protein K03744 lemA; LemA protein
D CVFO_0455 conserved hypothetical protein K03745 slyX; SlyX protein
D CVFO_1319 smg; Smg protein K03747 smg; Smg protein
D CVFO_1576 yjdF; conserved hypothetical protein K08984 yjdF; putative membrane protein
D CVFO_0350 phnA; phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D CVFO_1538 conserved hypothetical protein K06950 K06950; uncharacterized protein
D CVFO_0321 conserved hypothetical protein K07003 K07003; uncharacterized protein
D CVFO_0767 conserved hypothetical protein K07090 K07090; uncharacterized protein
D CVFO_0420 conserved hypothetical protein K07126 K07126; uncharacterized protein
D CVFO_0606 hypothetical protein K07126 K07126; uncharacterized protein
D CVFO_0607 hypothetical protein K07126 K07126; uncharacterized protein
D CVFO_0609 tetratricopeptide repeat family protein K07126 K07126; uncharacterized protein
D CVFO_0745 conserved hypothetical protein K07126 K07126; uncharacterized protein
D CVFO_0928 conserved hypothetical protein K07126 K07126; uncharacterized protein
D CVFO_1027 conserved hypothetical protein K07126 K07126; uncharacterized protein
D CVFO_1323 conserved hypothetical protein K08998 K08998; uncharacterized protein
D CVFO_0023 conserved hypothetical protein K09004 K09004; uncharacterized protein
D CVFO_1463 conserved hypothetical protein K09117 K09117; uncharacterized protein
D CVFO_1110 conserved hypothetical protein K09158 K09158; uncharacterized protein
D CVFO_0781 conserved hypothetical protein K09700 K09700; uncharacterized protein
D CVFO_1577 conserved hypothetical protein K09780 K09780; uncharacterized protein
D CVFO_1556 conserved hypothetical protein K09791 K09791; uncharacterized protein
D CVFO_1351 conserved hypothetical protein K09792 K09792; uncharacterized protein
D CVFO_1353 conserved hypothetical protein K09801 K09801; uncharacterized protein
D CVFO_0105 conserved hypothetical protein K09861 K09861; uncharacterized protein
D CVFO_0050 conserved hypothetical protein K09895 K09895; uncharacterized protein
D CVFO_0918 conserved hypothetical protein K09928 K09928; uncharacterized protein
D CVFO_1275 conserved hypothetical protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024