+D GENES KO #

  KEGG Orthology (KO) - Ignicoccus pacificus

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ipc00010] D IPA_03340 fructose-1 6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D IPA_09460 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D IPA_04115 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D IPA_01380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D IPA_01230 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D IPA_01360 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IPA_06290 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D IPA_03985 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D IPA_03990 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_03980 ferredoxin K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D IPA_01095 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D IPA_01100 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D IPA_05465 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IPA_08920 CoA-binding protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D IPA_03570 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D IPA_05820 aldehyde:ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6] C 00020 Citrate cycle (TCA cycle) [PATH:ipc00020] D IPA_02810 2-isopropylmalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D IPA_08710 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D IPA_01095 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D IPA_01100 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D IPA_01105 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D IPA_01110 4Fe-4S ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D IPA_05345 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D IPA_05340 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IPA_01965 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IPA_09745 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D IPA_04010 hypothetical protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IPA_03985 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D IPA_03990 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_03980 ferredoxin K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:ipc00030] D IPA_04030 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IPA_08610 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IPA_05480 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D IPA_01560 D-arabino 3-hexulose 6-phosphate aldehyde lyase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D IPA_08880 hypothetical protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D IPA_03570 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D IPA_08635 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D IPA_00005 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D IPA_04775 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D IPA_03340 fructose-1 6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] C 00040 Pentose and glucuronate interconversions C 00051 Fructose and mannose metabolism [PATH:ipc00051] D IPA_03570 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D IPA_03340 fructose-1 6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D IPA_09460 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D IPA_03570 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism D IPA_03570 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00620 Pyruvate metabolism [PATH:ipc00620] D IPA_05465 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IPA_03985 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D IPA_03990 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_03980 ferredoxin K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D IPA_01095 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D IPA_01100 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D IPA_08920 CoA-binding protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D IPA_04010 hypothetical protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IPA_09745 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D IPA_06290 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_01420 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D IPA_05665 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D IPA_07320 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ipc00630] D IPA_04010 hypothetical protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IPA_05465 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_04885 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D IPA_04275 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IPA_05895 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IPA_06695 formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit C 00640 Propanoate metabolism [PATH:ipc00640] D IPA_05465 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IPA_08920 CoA-binding protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D IPA_03985 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D IPA_03990 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_03980 ferredoxin K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D IPA_05340 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IPA_05345 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:ipc00650] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_01965 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IPA_02940 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D IPA_03985 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D IPA_03990 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_03980 ferredoxin K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D IPA_01095 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D IPA_01100 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D IPA_02540 hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D IPA_00930 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D IPA_00935 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ipc00660] D IPA_00930 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D IPA_00935 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D IPA_05340 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IPA_05345 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D IPA_04130 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D IPA_05015 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D IPA_05580 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D IPA_06485 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D IPA_01415 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ipc00562] D IPA_04940 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D IPA_09460 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ipc00190] D IPA_00290 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D IPA_00280 hypothetical protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D IPA_01965 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IPA_00830 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D IPA_00180 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D IPA_00185 ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D IPA_00195 ATPase K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D IPA_05985 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ipc00710] D IPA_01380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D IPA_04115 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D IPA_04030 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IPA_08610 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IPA_05480 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D IPA_09460 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D IPA_04010 hypothetical protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:ipc00720] D IPA_03985 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D IPA_03990 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_03980 ferredoxin K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D IPA_06290 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D IPA_04010 hypothetical protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IPA_09745 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D IPA_01965 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IPA_05345 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D IPA_05340 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IPA_02910 fatty-acid-CoA ligase K18861 K18861; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] D IPA_02940 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D IPA_08485 3-hydroxyacyl-CoA dehydrogenase K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_01095 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D IPA_01100 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D IPA_01105 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D IPA_01110 4Fe-4S ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D IPA_08710 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D IPA_05465 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:ipc00680] D IPA_06695 formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D IPA_05895 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IPA_01360 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IPA_04010 hypothetical protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IPA_03340 fructose-1 6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D IPA_08880 hypothetical protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D IPA_01560 D-arabino 3-hexulose 6-phosphate aldehyde lyase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D IPA_07540 glutamine amidotransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D IPA_05465 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IPA_03985 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D IPA_03990 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_03980 ferredoxin K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D IPA_06290 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D IPA_01230 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D IPA_06635 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00910 Nitrogen metabolism [PATH:ipc00910] D IPA_06185 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D IPA_04275 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism [PATH:ipc00920] D IPA_05435 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D IPA_05520 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D IPA_00340 hypothetical protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D IPA_07550 CoA disulfide reductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18] D IPA_07535 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D IPA_06925 cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ipc00061] D IPA_00355 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IPA_01710 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ipc00071] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_01710 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism C 00564 Glycerophospholipid metabolism [PATH:ipc00564] D IPA_07015 egsA; glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D IPA_05490 geranylgeranylglyceryl phosphate synthase K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D IPA_06050 hypothetical protein K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ipc00230] D IPA_03570 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D IPA_08635 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D IPA_00260 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D IPA_05775 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D IPA_00630 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D IPA_02470 purT; phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D IPA_01830 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D IPA_08540 hypothetical protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D IPA_08545 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D IPA_05050 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D IPA_08535 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D IPA_02860 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D IPA_00050 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D IPA_03630 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D IPA_09725 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D IPA_09030 yjjX; NTPase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D IPA_05180 deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D IPA_00365 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IPA_06260 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IPA_05335 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D IPA_08395 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D IPA_09285 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D IPA_01590 HIT family hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D IPA_05520 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D IPA_05435 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:ipc00240] D IPA_04155 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D IPA_04160 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D IPA_08925 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D IPA_08930 aspartate carbamoyltransferase K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D IPA_08980 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D IPA_02865 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D IPA_09690 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D IPA_09725 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D IPA_04290 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D IPA_09330 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D IPA_05335 ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D IPA_00520 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D IPA_03290 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ipc00250] D IPA_08995 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D IPA_08395 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D IPA_02860 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D IPA_08925 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D IPA_08930 aspartate carbamoyltransferase K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D IPA_04275 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IPA_04155 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D IPA_04160 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D IPA_08545 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D IPA_06985 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D IPA_00260 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D IPA_05775 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ipc00260] D IPA_09580 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IPA_00700 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D IPA_09350 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D IPA_05895 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IPA_01230 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D IPA_06635 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D IPA_00325 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D IPA_08815 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ipc00270] D IPA_07535 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D IPA_09605 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D IPA_09610 methylcobamide:CoM methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D IPA_01685 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D IPA_01460 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D IPA_09410 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D IPA_03145 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D IPA_00845 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D IPA_02600 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D IPA_04620 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D IPA_03700 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IPA_04605 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D IPA_09580 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IPA_00700 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D IPA_06925 cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D IPA_04010 hypothetical protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IPA_06635 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:ipc00280] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_02540 hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ipc00290] D IPA_04130 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D IPA_05015 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D IPA_05580 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D IPA_06485 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D IPA_01415 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D IPA_00930 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D IPA_00935 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D IPA_03895 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D IPA_00480 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D IPA_01420 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D IPA_05665 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D IPA_07320 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ipc00300] D IPA_09580 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IPA_04885 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D IPA_04150 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D IPA_00760 L-2-aminoadipate N-acetyltransferase K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43] D IPA_02000 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D IPA_02535 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D IPA_05460 acetyl-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] C 00310 Lysine degradation D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:ipc00220] D IPA_04180 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D IPA_08995 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D IPA_08545 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D IPA_04275 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IPA_04155 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D IPA_04160 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D IPA_04150 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW D IPA_04145 30S ribosomal protein S6 modification protein K19412 argX; glutamate---[amino group carrier protein] ligase [EC:6.3.2.60] D IPA_02000 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19] D IPA_02535 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106] D IPA_05460 acetyl-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] C 00330 Arginine and proline metabolism [PATH:ipc00330] D IPA_07940 hypothetical protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D IPA_09800 5-oxoprolinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D IPA_03145 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D IPA_01460 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D IPA_09410 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] C 00340 Histidine metabolism [PATH:ipc00340] D IPA_09320 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D IPA_01580 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D IPA_05470 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D IPA_05165 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D IPA_01575 hisH; imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D IPA_02430 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D IPA_04390 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D IPA_05320 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism C 00360 Phenylalanine metabolism D IPA_02640 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] C 00380 Tryptophan metabolism D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ipc00400] D IPA_05765 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D IPA_08315 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D IPA_06920 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D IPA_00705 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D IPA_05670 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D IPA_09785 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D IPA_00325 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D IPA_08815 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D IPA_09395 chorismate mutase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D IPA_00770 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:ipc00450] D IPA_06925 cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D IPA_09605 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D IPA_09610 methylcobamide:CoM methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D IPA_03355 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D IPA_05435 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D IPA_02220 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D IPA_05895 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism D IPA_08545 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] C 00480 Glutathione metabolism [PATH:ipc00480] D IPA_09655 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D IPA_08710 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D IPA_03145 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ipc00520] D IPA_00455 nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D IPA_06985 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D IPA_03570 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D IPA_05555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:ipc00541] D IPA_00455 nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D IPA_05555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D IPA_05745 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D IPA_05545 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D IPA_05550 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ipc00730] D IPA_02680 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D IPA_05695 ribulose-1,5-biphosphate synthetase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D IPA_09285 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ipc00740] D IPA_07155 5-amino-6-(5-phosphoribosylamino)uracil reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D IPA_05860 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D IPA_04495 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D IPA_01305 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D IPA_00375 riboflavin kinase K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D IPA_05875 cytidyltransferase K14656 ribL; FAD synthetase [EC:2.7.7.2] D IPA_04840 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:ipc00750] D IPA_09350 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D IPA_06125 pyridoxal biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D IPA_06315 glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:ipc00760] D IPA_01770 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D IPA_08225 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D IPA_04760 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D IPA_04455 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D IPA_08105 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] C 00770 Pantothenate and CoA biosynthesis [PATH:ipc00770] D IPA_00930 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D IPA_00935 hypothetical protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D IPA_03895 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D IPA_00480 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D IPA_07760 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D IPA_00770 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D IPA_05005 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] C 00780 Biotin metabolism [PATH:ipc00780] D IPA_00355 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:ipc00790] D IPA_05885 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D IPA_02380 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D IPA_09470 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D IPA_04365 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D IPA_09310 molybdenum cofactor biosynthesis protein MoaA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:ipc00670] D IPA_05895 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IPA_00835 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D IPA_01685 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D IPA_04605 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ipc00860] D IPA_00425 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IPA_00200 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D IPA_00130 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D IPA_00205 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D IPA_09245 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D IPA_02105 radical SAM protein K22226 ahbC; Fe-coproporphyrin III synthase D IPA_08705 coenzyme PQQ biosynthesis protein E K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ipc00130] D IPA_00995 prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D IPA_03550 hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D IPA_04840 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D IPA_03555 hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D IPA_04930 radical SAM protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D IPA_03080 ABC transporter substrate-binding protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ipc00900] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_02540 hypothetical protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D IPA_02310 3-hydroxy-3-methylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D IPA_09455 hypothetical protein K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182] D IPA_09450 hypothetical protein K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182] D IPA_02045 hypothetical protein K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126] D IPA_04840 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D IPA_04385 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D IPA_00085 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D IPA_03285 UDP-diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D IPA_04030 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IPA_08610 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ipc00523] D IPA_05555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D IPA_00455 nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D IPA_05745 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D IPA_05545 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D IPA_05550 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D IPA_05745 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:ipc00261] D IPA_05435 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D IPA_09580 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ipc00521] D IPA_03570 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D IPA_04940 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D IPA_05555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D IPA_00455 nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D IPA_05745 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D IPA_05545 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D IPA_05550 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:ipc00525] D IPA_05555 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D IPA_00455 nucleotidyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D IPA_05745 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D IPA_00705 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D IPA_05670 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D IPA_00355 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:ipc00999] D IPA_01685 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D IPA_08315 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites D IPA_00085 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D IPA_04840 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:ipc00633] D IPA_00495 cytochrome B K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D IPA_00490 hyaluronate lyase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D IPA_03985 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D IPA_03990 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D IPA_03975 pyruvate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D IPA_03980 ferredoxin K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ipc03020] D IPA_00165 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D IPA_08650 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D IPA_08655 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D IPA_05205 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D IPA_03775 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D IPA_00160 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D IPA_05225 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D IPA_02355 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:ipc03022] D IPA_03185 tfb; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D IPA_04400 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ipc03010] D IPA_08860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IPA_08820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D IPA_04905 30S ribosomal protein S3 K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D IPA_06010 30S ribosomal protein S4 K02987 RP-S4e; small subunit ribosomal protein S4e D IPA_07415 30S ribosomal protein S6 K02991 RP-S6e; small subunit ribosomal protein S6e D IPA_04535 30S ribosomal protein S8 K02995 RP-S8e; small subunit ribosomal protein S8e D IPA_05920 rps17E; 30S ribosomal protein S17 K02962 RP-S17e; small subunit ribosomal protein S17e D IPA_08790 30S ribosomal protein S19 K02966 RP-S19e; small subunit ribosomal protein S19e D IPA_06460 30S ribosomal protein S25 K02975 RP-S25e; small subunit ribosomal protein S25e D IPA_00020 30S ribosomal protein S26 K02976 RP-S26e; small subunit ribosomal protein S26e D IPA_03215 30S ribosomal protein S27 K02978 RP-S27e; small subunit ribosomal protein S27e D IPA_05930 30S ribosomal protein S27 K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D IPA_09735 30S ribosomal protein S28 K02979 RP-S28e; small subunit ribosomal protein S28e D IPA_09345 30S ribosomal protein S30 K02983 RP-S30e; small subunit ribosomal protein S30e D IPA_05230 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D IPA_01080 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D IPA_00565 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D IPA_08680 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D IPA_06025 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D IPA_05220 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D IPA_04570 rps10p; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D IPA_05200 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D IPA_08670 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D IPA_05185 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D IPA_06020 rps14P; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D IPA_04890 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D IPA_05995 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D IPA_01090 rps19p; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D IPA_05530 rpl4lp; 50S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e D IPA_08965 rpl7ae; 50S ribosomal protein L7 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D IPA_06540 50S ribosomal protein L16 K02866 RP-L10e; large subunit ribosomal protein L10e D IPA_04845 50S ribosomal protein L13 K02873 RP-L13e; large subunit ribosomal protein L13e D IPA_04000 50S ribosomal protein L14 K02875 RP-L14e; large subunit ribosomal protein L14e D IPA_03715 50S ribosomal protein L15 K02877 RP-L15e; large subunit ribosomal protein L15e D IPA_05210 50S ribosomal protein L18 K02883 RP-L18e; large subunit ribosomal protein L18e D IPA_05090 rplX; 50S ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D IPA_00580 rpl19e; 50S ribosomal protein L19 K02885 RP-L19e; large subunit ribosomal protein L19e D IPA_00475 50S ribosomal protein L21 K02889 RP-L21e; large subunit ribosomal protein L21e D IPA_09730 50S ribosomal protein L24 K02896 RP-L24e; large subunit ribosomal protein L24e D IPA_08660 50S ribosomal protein L30 K02908 RP-L30e; large subunit ribosomal protein L30e D IPA_08775 50S ribosomal protein L31 K02910 RP-L31e; large subunit ribosomal protein L31e D IPA_00585 50S ribosomal protein L32 K02912 RP-L32e; large subunit ribosomal protein L32e D IPA_09290 rpl34e; 50S ribosomal protein L34 K02915 RP-L34e; large subunit ribosomal protein L34e D IPA_08750 50S ribosomal protein L37 K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D IPA_08780 50S ribosomal protein L39 K02924 RP-L39e; large subunit ribosomal protein L39e D IPA_03830 50S ribosomal protein L40 K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D IPA_04305 50S ribosomal protein L44 K02929 RP-L44e; large subunit ribosomal protein L44e D IPA_05120 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D IPA_04995 rpl2p; 50S ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D IPA_05535 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D IPA_06015 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D IPA_00590 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D IPA_05125 acetyl-CoA biotin carboxyl carrier K02864 RP-L10; large subunit ribosomal protein L10 D IPA_05115 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D IPA_09235 rpl12p; 50S ribosomal protein L12 K02869 RP-L12; large subunit ribosomal protein L12 D IPA_05215 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D IPA_06000 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D IPA_00710 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D IPA_00570 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D IPA_01085 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D IPA_05525 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D IPA_06005 rpl24p; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D IPA_01075 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D IPA_00560 rpl30p; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 C 00970 Aminoacyl-tRNA biosynthesis [PATH:ipc00970] D IPA_01145 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IPA_04245 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IPA_04345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IPA_02150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_04070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_04615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_05375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_09065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_05805 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D IPA_03855 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D IPA_07555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D IPA_03745 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D IPA_06275 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IPA_01270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IPA_05270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IPA_08885 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IPA_00800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IPA_02735 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IPA_08455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IPA_04165 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D IPA_00595 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_01355 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_03670 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_08050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_09275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_04140 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IPA_05590 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IPA_00350 tRNA-Met K14230 tRNA-Met; tRNA Met D IPA_01950 tRNA-Met K14230 tRNA-Met; tRNA Met D IPA_08590 tRNA-Met K14230 tRNA-Met; tRNA Met D IPA_09230 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D IPA_01655 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IPA_04805 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IPA_02235 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IPA_03965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IPA_04195 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IPA_06945 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IPA_02840 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IPA_03505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IPA_07210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IPA_01595 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D IPA_00855 tRNA-Val K14237 tRNA-Val; tRNA Val D IPA_04680 tRNA-Val K14237 tRNA-Val; tRNA Val D IPA_07660 tRNA-Val K14237 tRNA-Val; tRNA Val D IPA_00425 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IPA_05640 glutamyl-tRNA(Gln) amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D IPA_01810 glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D IPA_09820 glutamyl-tRNA(Gln) amidotransferase K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D IPA_05390 glutamyl-tRNA(Gln) amidotransferase K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D IPA_07240 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IPA_04285 aspC; aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D IPA_04560 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D IPA_01150 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IPA_04265 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IPA_02090 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D IPA_02220 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D IPA_05825 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IPA_08865 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IPA_07915 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D IPA_07690 hypothetical protein K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D IPA_02975 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IPA_06780 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IPA_05625 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IPA_07005 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IPA_01935 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport D IPA_04825 tuf; elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha C 03015 mRNA surveillance pathway [PATH:ipc03015] D IPA_08465 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D IPA_08630 mRNA surveillance protein Pelota K06965 PELO; protein pelota C 03008 Ribosome biogenesis in eukaryotes [PATH:ipc03008] D IPA_04945 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56 D IPA_06840 ribosome biogenesis protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D IPA_03120 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D IPA_03485 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D IPA_01065 ribonuclease P K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D IPA_08770 translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D IPA_09465 RNA-associated protein K14574 SDO1; ribosome maturation protein SDO1 D IPA_01490 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D IPA_04210 serine/threonine kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ipc03060] D IPA_09280 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IPA_01990 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D IPA_05100 signal recognition particle K03110 ftsY; fused signal recognition particle receptor D IPA_05290 anion transporter K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D IPA_06325 peptidase S24 K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum [PATH:ipc04141] D IPA_09140 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_09445 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_06140 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D IPA_06845 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1 C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis D IPA_03830 50S ribosomal protein L40 K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D IPA_05930 30S ribosomal protein S27 K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae C 04122 Sulfur relay system [PATH:ipc04122] D IPA_09470 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D IPA_04365 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 03050 Proteasome [PATH:ipc03050] D IPA_08330 ATPase AAA K03420 psmR; proteasome regulatory subunit D IPA_00775 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D IPA_01405 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D IPA_07285 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:ipc03018] D IPA_05065 hypothetical protein K07573 CSL4; exosome complex component CSL4 D IPA_08130 RNA-binding protein K03679 RRP4; exosome complex component RRP4 D IPA_08140 exosome complex exonuclease K12589 RRP42; exosome complex component RRP42 D IPA_08135 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D IPA_01360 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] B B 09124 Replication and repair C 03030 DNA replication [PATH:ipc03030] D IPA_04590 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D IPA_08325 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D IPA_05620 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D IPA_04585 DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D IPA_09430 DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D IPA_07030 Minichromosome maintenance protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D IPA_07040 clamp loader protein K04801 rfcS; replication factor C small subunit D IPA_07045 replication protein C K04800 rfcL; replication factor C large subunit D IPA_09435 endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D IPA_09355 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:ipc03410] D IPA_04910 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D IPA_09435 endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D IPA_09355 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D IPA_01365 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D IPA_05910 hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] C 03420 Nucleotide excision repair [PATH:ipc03420] D IPA_08720 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D IPA_09355 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair D IPA_09355 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination C 03450 Non-homologous end-joining D IPA_09435 endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway D IPA_08720 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D IPA_03780 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4 D IPA_05110 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ipc02010] D IPA_00545 tungstate/molybdate transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein D IPA_00550 ABC transporter ATPase K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D IPA_05950 nitrate ABC transporter K02018 modB; molybdate transport system permease protein D IPA_06340 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D IPA_06350 spermidine/putrescine ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D IPA_03390 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D IPA_03035 hypothetical protein K02037 pstC; phosphate transport system permease protein D IPA_03030 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D IPA_03025 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D IPA_09220 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IPA_09225 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IPA_09705 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IPA_09700 branched-chain amino acid ABC transporter substrate-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IPA_09695 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:ipc03070] D IPA_09280 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IPA_05100 signal recognition particle K03110 ftsY; fused signal recognition particle receptor D IPA_01990 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:ipc02020] D IPA_03390 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D IPA_01440 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D IPA_04275 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_00490 hyaluronate lyase K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D IPA_00495 cytochrome B K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome [PATH:ipc04146] D IPA_01710 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D IPA_08710 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ipc02024] D IPA_00705 anthranilate synthase subunit I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D IPA_05670 anthranilate synthase subunit II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D IPA_09220 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IPA_09225 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IPA_09705 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IPA_09700 branched-chain amino acid ABC transporter substrate-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IPA_09695 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IPA_01710 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D IPA_03005 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D IPA_03010 peptide transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein D IPA_07070 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D IPA_09280 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IPA_05100 signal recognition particle K03110 ftsY; fused signal recognition particle receptor D IPA_01990 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D IPA_01360 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:ipc04981] D IPA_00835 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D IPA_05895 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ipc01000] C 01001 Protein kinases [BR:ipc01001] D IPA_05175 serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D IPA_01490 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D IPA_04210 serine/threonine kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:ipc01009] D IPA_04035 translation initiation factor 2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D IPA_04605 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] C 01002 Peptidases and inhibitors [BR:ipc01002] D IPA_07965 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D IPA_00365 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IPA_06260 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IPA_00260 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D IPA_05775 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D IPA_06985 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D IPA_05840 peptidase C56 K05520 yhbO; deglycase [EC:3.5.1.124] D IPA_09655 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D IPA_02505 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D IPA_07280 protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D IPA_03520 peptidase M54 K06974 amzA; archaemetzincin [EC:3.4.-.-] D IPA_03170 peptidase S9 K01303 APEH; acylaminoacyl-peptidase [EC:3.4.19.1] D IPA_06325 peptidase S24 K13280 SEC11; signal peptidase I [EC:3.4.21.89] D IPA_07715 peptidase S26 K07059 rho2; rhomboid family protease [EC:3.4.21.105] D IPA_00775 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D IPA_01405 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D IPA_07285 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 01003 Glycosyltransferases [BR:ipc01003] D IPA_00060 dolichol monophosphate mannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins C 01004 Lipid biosynthesis proteins [BR:ipc01004] D IPA_00355 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IPA_05465 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IPA_08920 CoA-binding protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D IPA_01710 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ipc01006] D IPA_00085 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D IPA_00995 prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:ipc01007] D IPA_07690 hypothetical protein K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D IPA_00425 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IPA_07005 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IPA_01935 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D IPA_02090 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D IPA_02975 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IPA_02220 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D IPA_07915 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D IPA_05825 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IPA_08865 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IPA_04285 aspC; aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D IPA_05625 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IPA_04560 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D IPA_04265 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IPA_06780 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IPA_01150 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IPA_07240 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IPA_05460 acetyl-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124] D IPA_00200 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ipc03000] D IPA_03700 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IPA_04400 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D IPA_09510 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D IPA_09490 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D IPA_01290 CRO protein K07729 K07729; putative transcriptional regulator D IPA_00245 XRE family transcriptional regulator K07731 K07731; putative transcriptional regulator C 03021 Transcription machinery [BR:ipc03021] D IPA_03185 tfb; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D IPA_04400 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D IPA_03780 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4 D IPA_05110 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 D IPA_00685 ATP-binding protein K24104 GPN; GPN-loop GTPase D IPA_08665 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D IPA_08650 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D IPA_08655 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D IPA_00165 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D IPA_05205 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D IPA_03775 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D IPA_00160 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D IPA_05225 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D IPA_02355 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D IPA_08580 DNA-directed RNA polymerase subunit M K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:ipc03019] D IPA_03780 DNA-binding protein K15171 SUPT4H1; transcription elongation factor SPT4 D IPA_05110 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 D IPA_09140 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_09445 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_08630 mRNA surveillance protein Pelota K06965 PELO; protein pelota D IPA_08465 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D IPA_04825 tuf; elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D IPA_05065 hypothetical protein K07573 CSL4; exosome complex component CSL4 D IPA_08130 RNA-binding protein K03679 RRP4; exosome complex component RRP4 D IPA_08135 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D IPA_08140 exosome complex exonuclease K12589 RRP42; exosome complex component RRP42 D IPA_01360 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 03041 Spliceosome C 03011 Ribosome [BR:ipc03011] D IPA_04905 30S ribosomal protein S3 K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D IPA_06010 30S ribosomal protein S4 K02987 RP-S4e; small subunit ribosomal protein S4e D IPA_07415 30S ribosomal protein S6 K02991 RP-S6e; small subunit ribosomal protein S6e D IPA_04535 30S ribosomal protein S8 K02995 RP-S8e; small subunit ribosomal protein S8e D IPA_05920 rps17E; 30S ribosomal protein S17 K02962 RP-S17e; small subunit ribosomal protein S17e D IPA_08790 30S ribosomal protein S19 K02966 RP-S19e; small subunit ribosomal protein S19e D IPA_06460 30S ribosomal protein S25 K02975 RP-S25e; small subunit ribosomal protein S25e D IPA_00020 30S ribosomal protein S26 K02976 RP-S26e; small subunit ribosomal protein S26e D IPA_03215 30S ribosomal protein S27 K02978 RP-S27e; small subunit ribosomal protein S27e D IPA_05930 30S ribosomal protein S27 K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D IPA_09735 30S ribosomal protein S28 K02979 RP-S28e; small subunit ribosomal protein S28e D IPA_09345 30S ribosomal protein S30 K02983 RP-S30e; small subunit ribosomal protein S30e D IPA_05530 rpl4lp; 50S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e D IPA_08965 rpl7ae; 50S ribosomal protein L7 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D IPA_06540 50S ribosomal protein L16 K02866 RP-L10e; large subunit ribosomal protein L10e D IPA_04845 50S ribosomal protein L13 K02873 RP-L13e; large subunit ribosomal protein L13e D IPA_04000 50S ribosomal protein L14 K02875 RP-L14e; large subunit ribosomal protein L14e D IPA_03715 50S ribosomal protein L15 K02877 RP-L15e; large subunit ribosomal protein L15e D IPA_05210 50S ribosomal protein L18 K02883 RP-L18e; large subunit ribosomal protein L18e D IPA_00580 rpl19e; 50S ribosomal protein L19 K02885 RP-L19e; large subunit ribosomal protein L19e D IPA_00475 50S ribosomal protein L21 K02889 RP-L21e; large subunit ribosomal protein L21e D IPA_09730 50S ribosomal protein L24 K02896 RP-L24e; large subunit ribosomal protein L24e D IPA_08660 50S ribosomal protein L30 K02908 RP-L30e; large subunit ribosomal protein L30e D IPA_08775 50S ribosomal protein L31 K02910 RP-L31e; large subunit ribosomal protein L31e D IPA_00585 50S ribosomal protein L32 K02912 RP-L32e; large subunit ribosomal protein L32e D IPA_09290 rpl34e; 50S ribosomal protein L34 K02915 RP-L34e; large subunit ribosomal protein L34e D IPA_08750 50S ribosomal protein L37 K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D IPA_08780 50S ribosomal protein L39 K02924 RP-L39e; large subunit ribosomal protein L39e D IPA_03830 50S ribosomal protein L40 K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D IPA_04305 50S ribosomal protein L44 K02929 RP-L44e; large subunit ribosomal protein L44e D IPA_05230 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D IPA_01080 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D IPA_00565 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D IPA_08680 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D IPA_06025 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D IPA_05220 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D IPA_04570 rps10p; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D IPA_05200 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D IPA_08670 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D IPA_05185 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D IPA_06020 rps14P; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D IPA_04890 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D IPA_05995 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D IPA_01090 rps19p; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D IPA_05120 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D IPA_04995 rpl2p; 50S ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D IPA_05535 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D IPA_06015 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D IPA_00590 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D IPA_05125 acetyl-CoA biotin carboxyl carrier K02864 RP-L10; large subunit ribosomal protein L10 D IPA_05115 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D IPA_05215 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D IPA_06000 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D IPA_00710 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D IPA_00570 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D IPA_01085 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D IPA_05525 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D IPA_06005 rpl24p; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D IPA_01075 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D IPA_00560 rpl30p; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D IPA_09235 rpl12p; 50S ribosomal protein L12 K02869 RP-L12; large subunit ribosomal protein L12 D IPA_05090 rplX; 50S ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D IPA_08860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IPA_08820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ipc03009] D IPA_04945 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56 D IPA_06840 ribosome biogenesis protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D IPA_03120 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D IPA_03485 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D IPA_02510 RNA-processing protein K06961 KRR1; ribosomal RNA assembly protein D IPA_01490 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D IPA_04210 serine/threonine kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D IPA_05325 ATPase K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D IPA_01065 ribonuclease P K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D IPA_08770 translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D IPA_09465 RNA-associated protein K14574 SDO1; ribosome maturation protein SDO1 D IPA_09140 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_09445 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_05705 SAM-dependent methyltransferase K04795 flpA; fibrillarin-like pre-rRNA processing protein D IPA_08965 rpl7ae; 50S ribosomal protein L7 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D IPA_08665 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D IPA_03930 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D IPA_04020 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D IPA_02335 30S ribosomal protein S18 K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D IPA_05010 30S ribosomal protein S18 K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D IPA_03420 GTP-binding protein HflX K03665 hflX; GTPase D IPA_08420 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D IPA_00485 ychF; translation-associated GTPase K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:ipc03016] D IPA_01065 ribonuclease P K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D IPA_02385 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D IPA_09305 tRNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D IPA_06105 archease K24956 ZBTB8OS; protein archease D IPA_04825 tuf; elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D IPA_00425 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IPA_06780 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IPA_07915 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D IPA_08865 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IPA_02220 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D IPA_02975 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IPA_07240 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IPA_04560 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D IPA_01150 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IPA_04265 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IPA_02090 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D IPA_05825 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IPA_05625 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IPA_07005 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IPA_01935 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D IPA_07270 Threonyl/alanyl tRNA synthetase SAD K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] D IPA_07790 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D IPA_06520 2-methylthioadenine synthetase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D IPA_07375 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D IPA_09115 tRNA-modifying protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D IPA_03650 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D IPA_07670 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D IPA_05175 serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D IPA_05935 tRNA threonylcarbamoyladenosine biosynthesis protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D IPA_08420 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D IPA_02515 archaeal RNase P K01978 rnpB; RNase P catalytic RNA component D IPA_04120 hypothetical protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D IPA_03605 tRNA-splicing endonuclease K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D IPA_08570 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D IPA_04500 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D IPA_07690 hypothetical protein K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D IPA_04285 aspC; aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D IPA_08600 integrase K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D IPA_03690 tRNA methyltransferase K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D IPA_02380 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D IPA_05725 ATPase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] C 03012 Translation factors [BR:ipc03012] D IPA_01495 translation initiation factor IF-1A K03236 EIF1A; translation initiation factor 1A D IPA_02350 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D IPA_06845 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1 D IPA_04035 translation initiation factor 2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D IPA_00140 translation initiation factor IF-2 subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3 D IPA_05145 translation initiation factor IF-5A K03263 EIF5A; translation initiation factor 5A D IPA_09780 translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B D IPA_08770 translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D IPA_04825 tuf; elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D IPA_04810 elongation factor 1-beta K03232 EEF1B; elongation factor 1-beta D IPA_06160 fusA; elongation factor EF-2 K03234 EEF2; elongation factor 2 D IPA_07140 ATP binding protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D IPA_08465 peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D IPA_09570 peptidyl-tRNA hydrolase K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:ipc03110] D IPA_03900 thermosome subunit K22447 cct; archaeal chaperonin D IPA_05405 thermosome subunit K22447 cct; archaeal chaperonin D IPA_06140 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D IPA_06960 prefoldin subunit alpha K04797 pfdA; prefoldin alpha subunit D IPA_07225 hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB C 04131 Membrane trafficking [BR:ipc04131] D IPA_09725 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D IPA_09140 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_09445 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_05290 anion transporter K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D IPA_06845 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1 D IPA_04825 tuf; elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:ipc04121] D IPA_03830 50S ribosomal protein L40 K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D IPA_05930 30S ribosomal protein S27 K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D IPA_09345 30S ribosomal protein S30 K02983 RP-S30e; small subunit ribosomal protein S30e C 03051 Proteasome [BR:ipc03051] D IPA_00775 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D IPA_01405 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D IPA_07285 proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D IPA_08330 ATPase AAA K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:ipc03032] D IPA_08325 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D IPA_09435 endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D IPA_09355 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D IPA_03700 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IPA_06840 ribosome biogenesis protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D IPA_08720 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D IPA_04590 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D IPA_08645 cell division control protein Cdc6 K10725 cdc6A; archaeal cell division control protein 6 D IPA_07030 Minichromosome maintenance protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D IPA_05620 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D IPA_04585 DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D IPA_09430 DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D IPA_07045 replication protein C K04800 rfcL; replication factor C large subunit D IPA_07040 clamp loader protein K04801 rfcS; replication factor C small subunit D IPA_06225 DNA topoisomerase VI subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D IPA_07820 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D IPA_02525 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D IPA_02010 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:ipc03036] D IPA_03700 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IPA_05155 DNA-binding protein K03622 albA; DNA/RNA-binding protein Alba D IPA_09005 DNA-binding protein K03622 albA; DNA/RNA-binding protein Alba D IPA_09335 ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:ipc03400] D IPA_09805 methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D IPA_04910 DNA lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D IPA_09435 endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D IPA_09355 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D IPA_08720 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D IPA_04860 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D IPA_03290 hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D IPA_01365 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D IPA_05910 hypothetical protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D IPA_07930 endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7] D IPA_08640 hypothetical protein K09120 dU; endonuclease dU D IPA_05965 hypothetical protein K03547 sbcD; DNA repair protein SbcD/Mre11 D IPA_08500 radA; DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA D IPA_01425 extensin K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D IPA_02525 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D IPA_03440 helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D IPA_05245 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D IPA_08520 hypothetical protein K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:ipc03029] D IPA_01065 ribonuclease P K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D IPA_07005 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IPA_08865 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IPA_04560 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D IPA_02975 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IPA_05640 glutamyl-tRNA(Gln) amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D IPA_01810 glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D IPA_09335 ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ipc02000] D IPA_05950 nitrate ABC transporter K02018 modB; molybdate transport system permease protein D IPA_00545 tungstate/molybdate transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein D IPA_00550 ABC transporter ATPase K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D IPA_06340 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D IPA_06350 spermidine/putrescine ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D IPA_03390 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D IPA_03035 hypothetical protein K02037 pstC; phosphate transport system permease protein D IPA_03030 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D IPA_03025 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D IPA_09220 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IPA_09225 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D IPA_09705 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D IPA_09700 branched-chain amino acid ABC transporter substrate-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D IPA_09695 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D IPA_03005 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D IPA_03010 peptide transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein D IPA_07070 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein D IPA_09100 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D IPA_03595 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D IPA_01550 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D IPA_01545 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IPA_02705 daunorubicin ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IPA_03740 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D IPA_00620 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D IPA_04055 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D IPA_04660 iron ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D IPA_01445 ammonium transporter K03320 amt; ammonium transporter, Amt family D IPA_08060 sodium transporter K14393 actP; cation/acetate symporter D IPA_04330 hypothetical protein K03281 clcA; chloride channel protein, CIC family D IPA_05290 anion transporter K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D IPA_07065 antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein D IPA_03960 hypothetical protein K07034 GPR1; acetate uptake transporter family protein D IPA_05300 carbon starvation protein CstA K06200 cstA; carbon starvation protein D IPA_04315 FeoA family protein K04758 feoA; ferrous iron transport protein A D IPA_04445 hypothetical protein K25505 cedA1; DNA import protein CedA1 C 02044 Secretion system [BR:ipc02044] D IPA_00305 typeII/typeIV secretory system protein ATPase K07332 flaI; archaeal flagellar protein FlaI D IPA_00310 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D IPA_00315 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D IPA_07965 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D IPA_09280 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IPA_01990 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D IPA_05100 signal recognition particle K03110 ftsY; fused signal recognition particle receptor C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins [BR:ipc02035] D IPA_00305 typeII/typeIV secretory system protein ATPase K07332 flaI; archaeal flagellar protein FlaI D IPA_00310 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D IPA_00315 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ D IPA_07965 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ipc04812] D IPA_02175 hypothetical protein K06990 MEMO1; MEMO1 family protein C 04147 Exosome [BR:ipc04147] D IPA_01360 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IPA_01380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D IPA_06620 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D IPA_04825 tuf; elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D IPA_06160 fusA; elongation factor EF-2 K03234 EEF2; elongation factor 2 D IPA_09435 endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D IPA_05930 30S ribosomal protein S27 K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D IPA_09140 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_09445 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase D IPA_07790 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D IPA_01710 AMP-dependent synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D IPA_07235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IPA_04605 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D IPA_09285 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D IPA_08995 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D IPA_04275 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D IPA_00130 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D IPA_06635 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D IPA_09460 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:ipc02048] D IPA_06420 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D IPA_06880 CRISPR-associated protein K19085 csa1; CRISPR-associated protein Csa1 D IPA_06405 CRISPR-associated protein K19121 csc2; CRISPR-associated protein Csc2 D IPA_01605 hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3 D IPA_03700 modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D IPA_02915 SAM-dependent methyltransferase K24451 zim; modification methylase D IPA_00425 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ipc03100] D IPA_01145 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IPA_04245 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IPA_04345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IPA_02150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_04070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_04615 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_05375 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_09065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IPA_05805 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D IPA_03855 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D IPA_07555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D IPA_03745 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D IPA_06275 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IPA_01270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IPA_05270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IPA_08885 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IPA_00800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IPA_02735 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IPA_08455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IPA_04165 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D IPA_00595 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_01355 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_03670 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_08050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_09275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IPA_04140 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IPA_05590 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IPA_00350 tRNA-Met K14230 tRNA-Met; tRNA Met D IPA_01950 tRNA-Met K14230 tRNA-Met; tRNA Met D IPA_08590 tRNA-Met K14230 tRNA-Met; tRNA Met D IPA_09230 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D IPA_01655 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IPA_04805 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IPA_02235 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IPA_03965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IPA_04195 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IPA_06945 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IPA_02840 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IPA_03505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IPA_07210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IPA_01595 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D IPA_00855 tRNA-Val K14237 tRNA-Val; tRNA Val D IPA_04680 tRNA-Val K14237 tRNA-Val; tRNA Val D IPA_07660 tRNA-Val K14237 tRNA-Val; tRNA Val D IPA_08860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IPA_08820 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D IPA_02515 archaeal RNase P K01978 rnpB; RNase P catalytic RNA component # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D IPA_05350 alcohol dehydrogenase K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24] D IPA_01805 indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D IPA_01800 indolepyruvate oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D IPA_06040 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D IPA_07305 ferredoxin--NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D IPA_01045 hypothetical protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D IPA_02625 ribonucleoside-triphosphate reductase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D IPA_04625 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D IPA_08940 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D IPA_01315 pyruvate formate lyase-activating protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D IPA_05635 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D IPA_01055 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D IPA_02930 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D IPA_00755 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D IPA_08495 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D IPA_01815 hypothetical protein K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9] D IPA_03045 ribosomal subunit interface protein K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D IPA_00410 ATP dependent DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] C 99981 Carbohydrate metabolism D IPA_01600 sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D IPA_05235 ferredoxin K05337 fer; ferredoxin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D IPA_07470 XRE family transcriptional regulator K03627 MBF1; putative transcription factor D IPA_01400 snRNP Sm K04796 RUXX; small nuclear ribonucleoprotein D IPA_01690 Sm ribonucleo K04796 RUXX; small nuclear ribonucleoprotein D IPA_07455 transcriptional regulator K07743 K07743; transcriptional regulator D IPA_08550 transcriptional regulator K07745 K07745; transcriptional regulator C 99974 Translation D IPA_08200 RNA-binding protein K07572 K07572; putative nucleotide binding protein D IPA_00235 beta-lactamase K07577 K07577; putative mRNA 3-end processing factor D IPA_01430 hypothetical protein K07577 K07577; putative mRNA 3-end processing factor D IPA_04815 RNA-binding protein K07580 K07580; Zn-ribbon RNA-binding protein C 99975 Protein processing D IPA_07985 hydrogenase K04653 hypC; hydrogenase expression/formation protein HypC D IPA_07115 hydrogenase expression protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D IPA_08090 hydrogenase assembly protein HupF K04655 hypE; hydrogenase expression/formation protein HypE D IPA_07750 hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D IPA_02970 hypothetical protein K07388 K07388; hydrogenase expression/formation protein C 99976 Replication and repair D IPA_05795 TATA binding protein (TBP)-interacting protein (TIP49) K07472 TIP49; TBP-interacting protein C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D IPA_05585 hypothetical protein K07166 K07166; ACT domain-containing protein D IPA_08785 hypothetical protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins C 99994 Others D IPA_02325 divalent ion tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D IPA_04645 ATPase K06865 K06865; ATPase D IPA_05415 methionyl-tRNA synthetase K06878 K06878; tRNA-binding protein D IPA_04655 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB D IPA_06995 TatD family hydrolase K07049 K07049; TatD-related deoxyribonuclease D IPA_03525 hypothetical protein K07143 K07143; UPF0148 protein C 99997 Function unknown D IPA_09050 hypothetical protein K06921 K06921; uncharacterized protein D IPA_04695 Fe-S osidoreductase K06935 K06935; uncharacterized protein D IPA_06965 phosphoesterase K06953 K06953; uncharacterized protein D IPA_09365 photosystem I assembly BtpA K06971 K06971; uncharacterized protein D IPA_05890 hypothetical protein K06983 K06983; uncharacterized protein D IPA_01860 hypothetical protein K07041 K07041; uncharacterized protein D IPA_01915 DNA polymerase subunit beta K07073 K07073; uncharacterized protein D IPA_09500 phosphoribosyl transferase K07101 K07101; uncharacterized protein D IPA_03370 tRNA-binding protein K07135 K07135; uncharacterized protein D IPA_08400 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D IPA_03940 hypothetical protein K09003 K09003; uncharacterized protein D IPA_00175 hypothetical protein K09010 K09010; uncharacterized protein D IPA_00225 hypothetical protein K09141 K09141; uncharacterized protein D IPA_05020 hypothetical protein K09157 K09157; uncharacterized protein D IPA_06065 hypothetical protein K09721 K09721; uncharacterized protein D IPA_03100 hypothetical protein K09732 K09732; uncharacterized protein D IPA_03265 hypothetical protein K09736 K09736; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 4, 2025