+D GENES KO #

  KEGG Orthology (KO) - Jeongeupia sp. HS-3

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:jes00010] D JHS3_03800 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHS3_00690 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D JHS3_30860 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHS3_02730 tpiA_1; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_28200 tpiA_2; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_03860 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JHS3_05880 pgk_1; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHS3_30830 pgk_2; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHS3_21270 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JHS3_19390 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JHS3_09660 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHS3_13360 pyk_1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_24360 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_30390 pyk_2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_11350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D JHS3_03790 pdhA; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHS3_03780 aceF; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08260 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHS3_10400 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JHS3_27150 yiaY; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D JHS3_01760 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHS3_01300 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_04210 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_25130 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D JHS3_22830 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JHS3_25680 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:jes00020] D JHS3_07980 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D JHS3_07890 prpC_1; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D JHS3_09820 rpfA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JHS3_09850 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JHS3_00500 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JHS3_07990 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D JHS3_08000 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08030 succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHS3_08020 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHS3_07950 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JHS3_07960 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JHS3_07930 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JHS3_07940 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JHS3_12140 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D JHS3_05010 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JHS3_07910 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHS3_03790 pdhA; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHS3_03780 aceF; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:jes00030] D JHS3_03800 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHS3_03830 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JHS3_03820 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D JHS3_16900 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D JHS3_27340 gndA; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JHS3_10540 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JHS3_21250 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHS3_30080 hypothetical protein K00616 TALDO1; transaldolase [EC:2.2.1.2] D JHS3_31670 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D JHS3_24700 putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D JHS3_17890 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D JHS3_01300 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_04210 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_28580 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JHS3_03840 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D JHS3_03850 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D JHS3_16510 4-hydroxy-2-ketovalerate aldolase K17463 dgaF; 2-dehydro-3-deoxy-phosphogluconate aldolase [EC:4.1.2.14] D JHS3_08470 aroK-1; gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D JHS3_02130 ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D JHS3_16560 PTS fructose transporter subunit IIA K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D JHS3_16550 PTS sugar transporter K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D JHS3_16540 PTS sorbose transporter subunit IIC K17466 dgaC; D-glucosaminate PTS system EIIC component D JHS3_16530 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D JHS3_16520 selenocysteine synthase K17468 dgaE; D-glucosaminate-6-phosphate ammonia-lyase [EC:4.3.1.29] D JHS3_30860 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHS3_00690 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:jes00040] D JHS3_10720 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JHS3_10990 galU-1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHS3_10540 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JHS3_01440 hypothetical protein K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16] D JHS3_01390 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] C 00051 Fructose and mannose metabolism [PATH:jes00051] D JHS3_24890 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JHS3_00690 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D JHS3_30860 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHS3_02730 tpiA_1; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_28200 tpiA_2; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_23020 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JHS3_07540 glycerol-3-phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D JHS3_17190 glycerol-3-phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D JHS3_25350 haloacid dehalogenase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] C 00052 Galactose metabolism [PATH:jes00052] D JHS3_21150 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D JHS3_10990 galU-1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHS3_01300 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_04210 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_00690 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D JHS3_18470 kbaZ; tagatose-bisphosphate aldolase subunit KbaZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D JHS3_18420 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D JHS3_18450 agaV; N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D JHS3_18440 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D JHS3_18430 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D JHS3_18410 nagA-1; N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.-] D JHS3_18460 agaS; tagatose-6-phosphate ketose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] D JHS3_13380 agaB; PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D JHS3_13390 agaC; N-acetylgalactosamine permease IIC component 1 K10985 agaC; galactosamine PTS system EIIC component D JHS3_13400 hypothetical protein K10986 agaD; galactosamine PTS system EIID component C 00053 Ascorbate and aldarate metabolism [PATH:jes00053] D JHS3_10720 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JHS3_26330 uge; NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D JHS3_10430 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D JHS3_10440 ulaA; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component C 00500 Starch and sucrose metabolism [PATH:jes00500] D JHS3_10990 galU-1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHS3_25070 bcsA; cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D JHS3_22830 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D JHS3_01300 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_04210 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_03800 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHS3_24890 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:jes00620] D JHS3_01760 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHS3_03790 pdhA; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHS3_03780 aceF; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_11470 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D JHS3_10400 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JHS3_27150 yiaY; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D JHS3_08260 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHS3_26780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JHS3_26770 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_06300 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_13360 pyk_1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_24360 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_30390 pyk_2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_08520 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JHS3_04870 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JHS3_04860 fabG_1; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHS3_11700 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JHS3_06900 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D JHS3_29740 ldhA; lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D JHS3_24680 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D JHS3_19080 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D JHS3_12030 maeB; bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D JHS3_07910 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHS3_12140 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D JHS3_05010 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JHS3_21620 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHS3_11350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D JHS3_19660 aceB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_04550 leuA_1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D JHS3_22200 leuA_2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:jes00630] D JHS3_19610 aceA; isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D JHS3_19660 aceB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D JHS3_07910 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHS3_07980 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D JHS3_07890 prpC_1; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D JHS3_09820 rpfA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JHS3_09850 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JHS3_01760 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_09620 phbB; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D JHS3_14430 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D JHS3_01290 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D JHS3_14330 lactate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D JHS3_03230 hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JHS3_10550 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JHS3_25210 agxT; serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHS3_07610 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D JHS3_24160 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_30190 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_07730 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_04830 gcvH2; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein D JHS3_25950 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JHS3_03850 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D JHS3_13690 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:jes00640] D JHS3_01760 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHS3_26780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JHS3_26770 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_06300 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_11470 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D JHS3_05410 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D JHS3_08520 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JHS3_04870 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JHS3_04860 fabG_1; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHS3_11700 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JHS3_24170 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D JHS3_08020 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHS3_08030 succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHS3_07890 prpC_1; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D JHS3_07880 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D JHS3_09820 rpfA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JHS3_09850 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JHS3_19610 aceA; isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D JHS3_05980 NADH-dependent alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D JHS3_18510 NADH-dependent alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D JHS3_28080 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:jes00650] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_12360 fadB; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHS3_10400 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JHS3_14430 3-hydroxybutyryl-CoA dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D JHS3_12210 phbC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D JHS3_21280 class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D JHS3_09620 phbB; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D JHS3_07950 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JHS3_07960 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JHS3_07930 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JHS3_07940 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JHS3_24170 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D JHS3_24180 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHS3_11470 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D JHS3_00720 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D JHS3_00710 CoA-transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D JHS3_00730 bdhA; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D JHS3_03680 bdhA1; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D JHS3_22080 ilvI; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHS3_22090 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:jes00660] D JHS3_22080 ilvI; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHS3_22090 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JHS3_08020 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHS3_08030 succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHS3_08180 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D JHS3_08190 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D JHS3_08220 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:jes00562] D JHS3_11160 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHS3_24710 phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHS3_22860 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D JHS3_02730 tpiA_1; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_28200 tpiA_2; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:jes00190] D JHS3_02750 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D JHS3_02760 nuoB1; NADH-quinone oxidoreductase subunit B 1 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D JHS3_02770 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D JHS3_02780 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D JHS3_02790 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D JHS3_02800 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D JHS3_02810 nuoG; NADH-quinone oxidoreductase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D JHS3_02820 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D JHS3_02830 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D JHS3_02840 nuoJ; NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D JHS3_02850 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D JHS3_02860 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D JHS3_02870 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D JHS3_02880 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D JHS3_27530 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D JHS3_07950 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JHS3_07960 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JHS3_07930 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JHS3_07940 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JHS3_29460 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D JHS3_29450 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JHS3_29440 cytochrome C1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D JHS3_24300 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D JHS3_08780 cytochrome c oxidase subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9] D JHS3_08790 coxP; bb3-type cytochrome oxidase subunit IV K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D JHS3_08800 coxO; cytochrome-c oxidase K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D JHS3_24250 cox3; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D JHS3_08810 coxN; alternative cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D JHS3_24220 ctaD; cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D JHS3_08820 hypothetical protein K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D JHS3_24210 hypothetical protein K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D JHS3_24230 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D JHS3_24290 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D JHS3_10070 cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D JHS3_10060 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D JHS3_10050 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D JHS3_10040 hypothetical protein K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D JHS3_15800 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D JHS3_17310 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D JHS3_15790 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D JHS3_17300 cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D JHS3_15780 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D JHS3_12720 nirM_1; cytochrome c-551 K08738 CYC; cytochrome c D JHS3_26710 nirM_2; cytochrome c-551 K08738 CYC; cytochrome c D JHS3_24970 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D JHS3_24950 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D JHS3_24960 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D JHS3_24980 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D JHS3_24940 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D JHS3_25010 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JHS3_24990 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JHS3_25000 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D JHS3_16430 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D JHS3_24860 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:jes00710] D JHS3_05880 pgk_1; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHS3_30830 pgk_2; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHS3_03860 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JHS3_30860 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHS3_21250 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JHS3_31670 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D JHS3_02730 tpiA_1; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_28200 tpiA_2; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_10540 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JHS3_30080 hypothetical protein K00616 TALDO1; transaldolase [EC:2.2.1.2] D JHS3_21620 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHS3_12030 maeB; bifunctional malic enzyme oxidoreductase/phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D JHS3_07910 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:jes00720] D JHS3_11350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D JHS3_21620 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHS3_07910 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHS3_12140 fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D JHS3_05010 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JHS3_07950 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JHS3_07960 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JHS3_07930 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JHS3_07940 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JHS3_08030 succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JHS3_08020 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_00500 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JHS3_09820 rpfA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JHS3_09850 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JHS3_08520 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JHS3_04870 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JHS3_04860 fabG_1; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHS3_11700 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JHS3_19900 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D JHS3_23320 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D JHS3_26770 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_06300 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_26780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JHS3_01760 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:jes00680] D JHS3_08260 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHS3_08270 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D JHS3_07730 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHS3_25210 agxT; serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHS3_14330 lactate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D JHS3_09660 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHS3_21620 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JHS3_07910 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHS3_30860 fba; fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JHS3_00690 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D JHS3_26780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D JHS3_26770 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_06300 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_01760 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHS3_11350 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D JHS3_21270 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JHS3_19390 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JHS3_06680 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JHS3_10240 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:jes00910] D JHS3_08850 nasA; nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D JHS3_28790 narK2; nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D JHS3_17400 narG_1; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28810 narG_2; respiratory nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D JHS3_17390 narH_1; respiratory nitrate reductase subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28820 narH_2; respiratory nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D JHS3_17370 narI_1; respiratory nitrate reductase subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28840 narI_2; nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D JHS3_08880 nitrate reductase subunit alpha K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D JHS3_08860 nasD; nitrite reductase large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D JHS3_11610 nitrite reductase large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D JHS3_08870 nirD; assimilatory nitrite reductase small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D JHS3_11600 nitrite reductase small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D JHS3_24600 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D JHS3_10470 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D JHS3_18370 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D JHS3_24160 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_30190 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_31530 gltB_1; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHS3_31550 gltB_2; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHS3_31540 gltD_1; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D JHS3_31560 gltD_2; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D JHS3_16330 can-2; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:jes00920] D JHS3_23580 cysP_1; sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D JHS3_23730 cysP_2; sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D JHS3_23570 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D JHS3_23560 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D JHS3_23550 cysA2; sulfate/thiosulfate import ATP-binding protein CysA 2 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D JHS3_03460 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D JHS3_03440 tauC; taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D JHS3_03450 tauB; taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D JHS3_03430 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D JHS3_03570 ssuA; nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_15870 astR; aryl sulfate ester ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_23670 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_23680 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_03590 ssuC_1; ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JHS3_15850 hypothetical protein K15554 ssuC; sulfonate transport system permease protein D JHS3_15860 hypothetical protein K15554 ssuC; sulfonate transport system permease protein D JHS3_23650 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JHS3_15840 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JHS3_23640 ssuB1; aliphatic sulfonates import ATP-binding protein SsuB 1 K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JHS3_03510 ssuD_1; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D JHS3_23660 ssuD_2; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D JHS3_23690 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D JHS3_24520 cysNC; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D JHS3_24510 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHS3_18140 cysH-2; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D JHS3_06080 cysI; sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D JHS3_17330 sulfite/nitrite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D JHS3_12180 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHS3_01280 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JHS3_26460 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D JHS3_26400 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D JHS3_11650 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:jes00061] D JHS3_08520 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JHS3_04870 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JHS3_04860 fabG_1; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JHS3_11700 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JHS3_17470 acpP_1; acyl carrier protein K02078 acpP; acyl carrier protein D JHS3_31290 acpP_2; acyl carrier protein K02078 acpP; acyl carrier protein D JHS3_31300 acyl carrier protein K02078 acpP; acyl carrier protein D JHS3_17490 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JHS3_17500 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D JHS3_31180 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JHS3_17460 fabF-1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHS3_31150 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHS3_14670 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_17480 fabG_2; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_31160 fabG_3; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_09220 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JHS3_18820 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHS3_27650 fabI1; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHS3_08590 fadD-2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:jes00071] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_12350 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D JHS3_12360 fadB; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHS3_12380 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D JHS3_08590 fadD-2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D JHS3_13970 rubB; pyridine nucleotide-disulfide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D JHS3_08260 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHS3_10400 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JHS3_27150 yiaY; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:jes00074] D JHS3_14280 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D JHS3_17470 acpP_1; acyl carrier protein K02078 acpP; acyl carrier protein D JHS3_31290 acpP_2; acyl carrier protein K02078 acpP; acyl carrier protein D JHS3_31300 acyl carrier protein K02078 acpP; acyl carrier protein D JHS3_17490 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:jes00561] D JHS3_25950 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JHS3_28080 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D JHS3_02120 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D JHS3_17510 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D JHS3_12600 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JHS3_00300 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JHS3_29840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JHS3_26800 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D JHS3_01570 glycosyl transferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] C 00564 Glycerophospholipid metabolism [PATH:jes00564] D JHS3_20110 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D JHS3_02110 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D JHS3_12600 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JHS3_00300 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JHS3_29840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JHS3_26800 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D JHS3_22860 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D JHS3_09160 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D JHS3_22190 phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D JHS3_22180 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D JHS3_10840 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D JHS3_07830 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D JHS3_11180 clsB; cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism D JHS3_22860 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:jes00600] D JHS3_23780 atsA_1; arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1] D JHS3_25930 atsA_2; arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1] D JHS3_16870 chb_1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_17210 chb_2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_29860 chb_3; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:jes00592] D JHS3_12350 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:jes01040] D JHS3_20050 aminotransferase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D JHS3_00960 tesA; arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:jes00230] D JHS3_18170 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D JHS3_01300 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_04210 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_28580 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JHS3_11660 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D JHS3_31120 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D JHS3_29390 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D JHS3_13730 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D JHS3_16880 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D JHS3_29380 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D JHS3_27060 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D JHS3_27080 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D JHS3_27030 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D JHS3_00570 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JHS3_31100 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JHS3_07700 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D JHS3_22840 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D JHS3_09920 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JHS3_12940 acid sugar phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D JHS3_14730 UPF0345 protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D JHS3_02080 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D JHS3_07710 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D JHS3_14000 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D JHS3_13950 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JHS3_20640 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D JHS3_07750 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JHS3_16040 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JHS3_01030 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D JHS3_20570 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D JHS3_05520 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHS3_05550 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JHS3_24630 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D JHS3_29920 dgt2; deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D JHS3_20550 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D JHS3_31690 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D JHS3_13340 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D JHS3_13800 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D JHS3_26980 sugar kinase K00856 ADK; adenosine kinase [EC:2.7.1.20] D JHS3_23240 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D JHS3_25740 add-2; adenine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D JHS3_04900 hypothetical protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D JHS3_00660 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D JHS3_00290 apaH; bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D JHS3_24520 cysNC; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D JHS3_24510 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHS3_25520 CYTH domain-containing protein C 00240 Pyrimidine metabolism [PATH:jes00240] D JHS3_02610 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JHS3_02600 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JHS3_30890 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D JHS3_26030 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JHS3_30900 pyrX; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JHS3_07590 pyrDA; dihydroorotate dehydrogenase A (fumarate) K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D JHS3_19890 pyrD; dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D JHS3_25150 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D JHS3_10730 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D JHS3_09130 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D JHS3_13950 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JHS3_24000 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D JHS3_27910 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D JHS3_27950 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D JHS3_09640 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D JHS3_10780 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D JHS3_22840 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D JHS3_09920 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JHS3_12940 acid sugar phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D JHS3_17030 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D JHS3_14730 UPF0345 protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D JHS3_14640 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D JHS3_04900 hypothetical protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D JHS3_17020 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D JHS3_24630 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D JHS3_09010 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D JHS3_05520 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHS3_05550 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JHS3_16170 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D JHS3_12430 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D JHS3_10580 hypothetical protein K00560 thyA; thymidylate synthase [EC:2.1.1.45] D JHS3_06340 NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D JHS3_18850 putative NADH dehydrogenase/NAD(P)H nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:jes00250] D JHS3_07360 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D JHS3_08960 ansB; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D JHS3_18020 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D JHS3_25210 agxT; serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHS3_14710 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JHS3_27450 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHS3_13800 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D JHS3_00570 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JHS3_30890 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D JHS3_24170 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D JHS3_24180 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHS3_31530 gltB_1; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHS3_31550 gltB_2; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHS3_31540 gltD_1; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D JHS3_31560 gltD_2; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D JHS3_10470 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D JHS3_18370 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D JHS3_04510 putA_1; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHS3_12470 putA_2; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHS3_24160 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_30190 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_02610 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JHS3_02600 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JHS3_30430 glmS_2; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JHS3_11660 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:jes00260] D JHS3_03380 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHS3_29680 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JHS3_18040 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JHS3_24730 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D JHS3_18050 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D JHS3_03700 ltaE; threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D JHS3_07730 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHS3_25210 agxT; serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHS3_14330 lactate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D JHS3_25950 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JHS3_21270 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JHS3_19390 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JHS3_06680 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JHS3_10240 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D JHS3_06340 NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_04830 gcvH2; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein D JHS3_22190 phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D JHS3_18490 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D JHS3_27640 ilvA; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHS3_19500 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D JHS3_11710 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D JHS3_11720 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:jes00270] D JHS3_01280 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JHS3_26460 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D JHS3_27110 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JHS3_27670 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHS3_20390 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D JHS3_23090 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JHS3_23120 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D JHS3_19920 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_21790 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_23170 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_25690 mtnN-1; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D JHS3_02080 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D JHS3_05440 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D JHS3_10980 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D JHS3_19020 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D JHS3_25280 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D JHS3_23230 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHS3_03380 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHS3_29680 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JHS3_18040 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JHS3_26400 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D JHS3_11650 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D JHS3_17080 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHS3_22990 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D JHS3_23000 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D JHS3_12180 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHS3_19500 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D JHS3_07910 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D JHS3_18490 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D JHS3_09390 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D JHS3_06680 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:jes00280] D JHS3_17080 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_12350 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D JHS3_14460 methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D JHS3_00720 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D JHS3_00710 CoA-transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:jes00290] D JHS3_27640 ilvA; L-threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JHS3_08180 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D JHS3_08190 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D JHS3_08220 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D JHS3_22080 ilvI; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHS3_22090 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JHS3_22100 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D JHS3_31750 ilvD-1; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D JHS3_17080 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHS3_18020 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D JHS3_04550 leuA_1; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D JHS3_22200 leuA_2; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:jes00300] D JHS3_18040 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JHS3_03380 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHS3_29680 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JHS3_07850 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHS3_16260 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D JHS3_09960 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D JHS3_09970 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D JHS3_08550 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JHS3_21040 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D JHS3_14350 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D JHS3_07610 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D JHS3_26150 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JHS3_26160 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:jes00310] D JHS3_12840 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase D JHS3_08000 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_19500 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D JHS3_24180 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JHS3_20870 cytochrome c550 K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:jes00220] D JHS3_14690 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D JHS3_14710 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JHS3_27450 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHS3_24160 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_30190 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_02610 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JHS3_02600 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JHS3_10470 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D JHS3_18370 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D JHS3_18020 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D JHS3_21070 argA; amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D JHS3_01320 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D JHS3_21710 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D JHS3_18900 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] C 00330 Arginine and proline metabolism [PATH:jes00330] D JHS3_12710 ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D JHS3_19920 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_21790 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_23170 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_23120 hypothetical protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D JHS3_00810 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D JHS3_11330 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D JHS3_11310 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D JHS3_11340 argD; acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D JHS3_11320 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D JHS3_11300 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D JHS3_24190 hypothetical protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D JHS3_24140 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D JHS3_19310 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D JHS3_04510 putA_1; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHS3_12470 putA_2; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHS3_25840 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D JHS3_24480 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D JHS3_00580 hypothetical protein K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] D JHS3_20870 cytochrome c550 K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:jes00340] D JHS3_29120 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D JHS3_13810 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D JHS3_28920 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D JHS3_28910 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D JHS3_28890 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D JHS3_28880 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D JHS3_28900 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D JHS3_28870 hypothetical protein K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D JHS3_06720 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_17560 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_13750 histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D JHS3_29100 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D JHS3_31240 hutH-1; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D JHS3_12740 dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:jes00350] D JHS3_06720 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_17560 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_08260 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHS3_10400 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JHS3_27150 yiaY; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D JHS3_19620 hypothetical protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D JHS3_24180 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:jes00360] D JHS3_06720 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_17560 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_05810 dadA_1; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D JHS3_25790 dadA2; D-amino acid dehydrogenase 2 K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D JHS3_27480 dadA_2; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D JHS3_20870 cytochrome c550 K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00380 Tryptophan metabolism [PATH:jes00380] D JHS3_08000 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_01290 katA; catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:jes00400] D JHS3_26740 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D JHS3_10820 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D JHS3_22240 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D JHS3_04880 aroQ1; 3-dehydroquinate dehydratase 1 K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D JHS3_30210 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D JHS3_22250 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D JHS3_17160 hypothetical protein K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D JHS3_03100 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D JHS3_12060 trpE_1; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JHS3_12070 pabA; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D JHS3_12090 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D JHS3_11730 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D JHS3_12100 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D JHS3_11710 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D JHS3_11720 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JHS3_06700 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D JHS3_10800 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D JHS3_06720 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_17560 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:jes00410] D JHS3_31480 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D JHS3_24170 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D JHS3_20790 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:jes00430] D JHS3_16940 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHS3_03430 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D JHS3_10470 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D JHS3_26770 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_06300 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D JHS3_26780 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:jes00440] D JHS3_06440 phnX; phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D JHS3_06430 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D JHS3_06450 oxidoreductase K27877 pbfD; 2-(methylaminoethyl)phosphonate oxidase [EC:1.5.3.27] D JHS3_16130 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:jes00450] D JHS3_27110 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JHS3_27670 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHS3_20390 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D JHS3_11220 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D JHS3_09040 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D JHS3_24520 cysNC; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D JHS3_24510 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHS3_06910 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:jes00460] D JHS3_16940 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHS3_08960 ansB; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D JHS3_07730 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:jes00470] D JHS3_03370 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JHS3_20870 cytochrome c550 K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHS3_26220 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JHS3_19500 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D JHS3_18710 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D JHS3_26180 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JHS3_21040 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D JHS3_14350 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D JHS3_05810 dadA_1; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D JHS3_25790 dadA2; D-amino acid dehydrogenase 2 K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D JHS3_27480 dadA_2; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:jes00480] D JHS3_16940 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHS3_18720 UPF0271 protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D JHS3_18740 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D JHS3_18730 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D JHS3_22990 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D JHS3_23000 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D JHS3_21180 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D JHS3_06070 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D JHS3_12810 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D JHS3_23430 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHS3_30410 gst15; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHS3_31070 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHS3_31400 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D JHS3_00500 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JHS3_27340 gndA; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JHS3_03830 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JHS3_02580 bsaA; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D JHS3_03740 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D JHS3_26920 glutaredoxin K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D JHS3_19920 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_21790 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_23170 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16] D JHS3_19690 glutathione S-transferase B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:jes00520] D JHS3_11560 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D JHS3_05420 pgp; phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D JHS3_21300 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D JHS3_21290 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D JHS3_07900 nagE; PTS N-acetylglucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D JHS3_24920 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D JHS3_12990 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D JHS3_29140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JHS3_21580 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JHS3_10360 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D JHS3_17760 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D JHS3_20030 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D JHS3_21590 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D JHS3_30000 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D JHS3_16870 chb_1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_17210 chb_2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_29860 chb_3; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_18130 hypothetical protein K18676 gspK; glucosamine kinase [EC:2.7.1.8] D JHS3_02680 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D JHS3_18420 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D JHS3_13380 agaB; PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D JHS3_13390 agaC; N-acetylgalactosamine permease IIC component 1 K10985 agaC; galactosamine PTS system EIIC component D JHS3_13400 hypothetical protein K10986 agaD; galactosamine PTS system EIID component D JHS3_18450 agaV; N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D JHS3_18440 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D JHS3_18430 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D JHS3_18410 nagA-1; N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.-] D JHS3_08200 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D JHS3_30430 glmS_2; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JHS3_24890 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JHS3_03800 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHS3_26330 uge; NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D JHS3_25680 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D JHS3_25130 polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D JHS3_01300 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_04210 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_10990 galU-1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHS3_10720 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JHS3_21150 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D JHS3_23020 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JHS3_22700 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:jes00541] D JHS3_24920 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D JHS3_29510 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D JHS3_09650 kdsA1; 2-dehydro-3-deoxyphosphooctonate aldolase 1 K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D JHS3_29520 hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D JHS3_00650 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D JHS3_12990 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D JHS3_00900 gmhA_1; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D JHS3_30940 gmhA_2; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D JHS3_29830 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D JHS3_10710 waaE; ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D JHS3_20070 hypothetical protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D JHS3_09350 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D JHS3_10990 galU-1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JHS3_10720 rkpK; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JHS3_10670 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D JHS3_06580 hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D JHS3_15200 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D JHS3_22700 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHS3_22720 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JHS3_22690 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JHS3_22710 rfbD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:jes00511] D JHS3_16870 chb_1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_17210 chb_2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_29860 chb_3; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:jes00540] D JHS3_09230 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D JHS3_26260 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D JHS3_09210 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D JHS3_18990 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D JHS3_09240 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D JHS3_00630 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D JHS3_23800 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D JHS3_19670 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JHS3_23070 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JHS3_23080 acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JHS3_23810 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D JHS3_17110 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D JHS3_26340 putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D JHS3_26350 glycosyl transferase family 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00550 Peptidoglycan biosynthesis [PATH:jes00550] D JHS3_29140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JHS3_21580 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JHS3_26210 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D JHS3_26180 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JHS3_26150 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JHS3_26220 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JHS3_26160 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D JHS3_09150 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JHS3_24310 uppP2; undecaprenyl-diphosphatase 2 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JHS3_26170 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JHS3_26200 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JHS3_30220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_22310 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JHS3_09370 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D JHS3_26190 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_31000 mrdB; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_30990 mrdA; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JHS3_26140 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JHS3_20860 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JHS3_03980 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D JHS3_25440 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:jes00552] D JHS3_24310 uppP2; undecaprenyl-diphosphatase 2 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:jes00543] D JHS3_01280 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:jes00730] D JHS3_22680 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D JHS3_25480 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D JHS3_27570 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D JHS3_01260 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JHS3_04340 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D JHS3_20530 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D JHS3_27550 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D JHS3_27560 thiE-2; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D JHS3_07820 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D JHS3_13310 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D JHS3_00660 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:jes00740] D JHS3_17420 hypothetical protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D JHS3_07790 ribB_1; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D JHS3_07760 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D JHS3_20680 ribB_2; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D JHS3_07800 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D JHS3_07780 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D JHS3_10120 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D JHS3_23690 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D JHS3_27550 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D JHS3_18170 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D JHS3_29630 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:jes00750] D JHS3_28760 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D JHS3_06680 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JHS3_21330 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D JHS3_07490 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D JHS3_18050 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:jes00760] D JHS3_07360 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D JHS3_17950 nadA; quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D JHS3_04220 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D JHS3_24010 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D JHS3_22840 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D JHS3_09920 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JHS3_12940 acid sugar phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D JHS3_17940 ADP-ribose pyrophosphatase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D JHS3_24490 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D JHS3_27220 hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D JHS3_01640 nadE; NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D JHS3_05680 competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D JHS3_27230 pbeF; nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D JHS3_13150 cobB; NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D JHS3_10330 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D JHS3_24180 davD; glutarate-semialdehyde dehydrogenase DavD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:jes00770] D JHS3_22080 ilvI; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JHS3_22090 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JHS3_22100 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D JHS3_31750 ilvD-1; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D JHS3_20820 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D JHS3_20790 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D JHS3_20460 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D JHS3_12440 dfp; phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D JHS3_19540 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D JHS3_00330 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D JHS3_04980 acpH; acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D JHS3_17080 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHS3_31480 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:jes00780] D JHS3_04970 bioC1; malonyl-[acyl-carrier protein] O-methyltransferase 1 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D JHS3_31180 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JHS3_17460 fabF-1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHS3_31150 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHS3_14670 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_17480 fabG_2; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_31160 fabG_3; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_09220 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JHS3_18820 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHS3_27650 fabI1; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHS3_20130 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D JHS3_20140 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D JHS3_21000 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D JHS3_15150 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D JHS3_12300 bioB-2; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6] C 00785 Lipoic acid metabolism [PATH:jes00785] D JHS3_20890 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D JHS3_20900 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_03790 pdhA; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JHS3_03780 aceF; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JHS3_07990 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D JHS3_08000 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D JHS3_04830 gcvH2; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:jes00790] D JHS3_02050 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D JHS3_11210 ntpA; NUDIX pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D JHS3_12610 folB; 7,8-dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D JHS3_20830 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D JHS3_02670 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D JHS3_10560 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D JHS3_11690 folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D JHS3_17420 hypothetical protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D JHS3_07790 ribB_1; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D JHS3_17450 trpE_2; hypothetical protein K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D JHS3_17440 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D JHS3_29990 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D JHS3_13300 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D JHS3_21810 ptr1; pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33] D JHS3_26580 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D JHS3_26560 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D JHS3_09990 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D JHS3_29080 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D JHS3_29040 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D JHS3_07530 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D JHS3_29060 moeA; molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:jes00670] D JHS3_10560 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D JHS3_19900 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D JHS3_07730 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHS3_29390 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D JHS3_31100 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JHS3_27670 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JHS3_10580 hypothetical protein K00560 thyA; thymidylate synthase [EC:2.1.1.45] D JHS3_13690 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D JHS3_23320 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D JHS3_25660 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D JHS3_23090 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JHS3_23230 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_04830 gcvH2; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:jes00860] D JHS3_17260 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHS3_31370 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D JHS3_25530 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D JHS3_27490 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D JHS3_24810 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D JHS3_14580 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D JHS3_31500 hemF; oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D JHS3_11980 hemN; coproporphyrinogen-III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D JHS3_03180 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D JHS3_25510 membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D JHS3_06970 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D JHS3_12750 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D JHS3_08890 cobA-2; uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D JHS3_24300 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D JHS3_24290 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D JHS3_07090 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D JHS3_17740 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D JHS3_23920 cobU; adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D JHS3_23860 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D JHS3_09860 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D JHS3_13760 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D JHS3_13770 brf1; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:jes00130] D JHS3_20230 ubiC; putative chorismate pyruvate-lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D JHS3_20240 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D JHS3_14410 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D JHS3_29630 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D JHS3_16720 ubiquinone biosynthesis hydroxylase UbiH K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D JHS3_27350 hypothetical protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D JHS3_27360 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D JHS3_27370 hypothetical protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT D JHS3_05430 ubiG; ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D JHS3_20360 hypothetical protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D JHS3_30040 ubiE; ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D JHS3_18950 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D JHS3_14210 dhbC; isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2] D JHS3_18320 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D JHS3_22220 NAD(P)H quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D JHS3_27020 NAD(P)H dehydrogenase (quinone) K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:jes00900] D JHS3_04340 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D JHS3_09170 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D JHS3_19030 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D JHS3_28570 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D JHS3_19010 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D JHS3_13910 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D JHS3_10090 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_29630 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D JHS3_04330 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D JHS3_22460 ispB; octaprenyl-diphosphate synthase IspB K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D JHS3_09150 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JHS3_13290 peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:jes00906] D JHS3_03120 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:jes00907] D JHS3_12350 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D JHS3_21250 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:jes00523] D JHS3_22700 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHS3_22720 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JHS3_22690 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JHS3_22710 rfbD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:jes01053] D JHS3_14210 dhbC; isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2] D JHS3_14230 dhbB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D JHS3_14270 dhbA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D JHS3_14280 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D JHS3_14220 dhbE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D JHS3_14240 hypothetical protein K15653 mxcG; nonribosomal peptide synthetase MxcG D JHS3_14190 aminotransferase class III K15681 mxcL; aminotransferase MxcL C 01055 Biosynthesis of vancomycin group antibiotics D JHS3_22720 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:jes00332] D JHS3_25840 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D JHS3_24480 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:jes00261] D JHS3_24520 cysNC; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D JHS3_24510 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JHS3_03380 lysC; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JHS3_29680 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JHS3_07850 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JHS3_16260 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:jes00521] D JHS3_01300 pgm; alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_04210 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JHS3_11160 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHS3_24710 phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JHS3_22700 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHS3_22720 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JHS3_22690 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JHS3_22710 rfbD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:jes00525] D JHS3_22700 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JHS3_22720 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:jes00401] D JHS3_10800 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D JHS3_06720 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_17560 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D JHS3_12060 trpE_1; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JHS3_12070 pabA; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D JHS3_17490 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JHS3_14670 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_17480 fabG_2; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_31160 fabG_3; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_18820 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHS3_27650 fabI1; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D JHS3_17470 acpP_1; acyl carrier protein K02078 acpP; acyl carrier protein D JHS3_31290 acpP_2; acyl carrier protein K02078 acpP; acyl carrier protein D JHS3_31300 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:jes00999] D JHS3_23090 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JHS3_30210 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:jes00362] D JHS3_12350 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D JHS3_04790 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D JHS3_01210 fdx; 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D JHS3_12360 fadB; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:jes00627] D JHS3_06900 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D JHS3_29630 ubiX; flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:jes00364] D JHS3_12800 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D JHS3_25730 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:jes00625] D JHS3_27150 yiaY; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D JHS3_08260 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHS3_10400 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D JHS3_30130 hydrolase C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:jes00361] D JHS3_12800 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D JHS3_25730 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D JHS3_30130 hydrolase C 00623 Toluene degradation [PATH:jes00623] D JHS3_12800 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D JHS3_25730 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:jes00633] D JHS3_05960 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D JHS3_31430 sye3; alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D JHS3_12350 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:jes00626] D JHS3_27150 yiaY; alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D JHS3_08260 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D JHS3_10400 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:jes00984] D JHS3_12350 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:jes03020] D JHS3_31840 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JHS3_31850 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JHS3_00270 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JHS3_20560 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:jes03010] D JHS3_r00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_10770 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D JHS3_09110 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D JHS3_00080 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D JHS3_00260 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D JHS3_00190 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D JHS3_11790 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D JHS3_31870 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D JHS3_00160 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D JHS3_18910 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D JHS3_00010 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D JHS3_00250 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D JHS3_31860 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D JHS3_00240 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D JHS3_00150 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JHS3_08650 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D JHS3_00400 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D JHS3_00110 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D JHS3_11810 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D JHS3_00060 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D JHS3_17590 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D JHS3_17700 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D JHS3_31810 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D JHS3_00050 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D JHS3_00020 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D JHS3_00030 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D JHS3_00140 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D JHS3_00170 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D JHS3_11820 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D JHS3_31820 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D JHS3_31800 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D JHS3_31830 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D JHS3_18920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D JHS3_00120 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D JHS3_00210 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D JHS3_00090 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D JHS3_00280 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D JHS3_00180 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D JHS3_00430 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D JHS3_02940 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D JHS3_22450 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D JHS3_00070 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D JHS3_00040 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D JHS3_00130 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D JHS3_28590 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D JHS3_22440 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D JHS3_01820 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D JHS3_00100 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D JHS3_00200 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D JHS3_14780 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D JHS3_17520 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D JHS3_01810 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D JHS3_02930 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 C 00970 Aminoacyl-tRNA biosynthesis [PATH:jes00970] D JHS3_t00020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00190 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00270 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00470 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00220 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00390 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JHS3_t00400 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JHS3_t00130 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JHS3_t00230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JHS3_t00370 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D JHS3_t00570 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JHS3_t00030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JHS3_t00050 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JHS3_t00110 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JHS3_t00180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHS3_t00350 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHS3_t00360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHS3_t00600 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHS3_t00430 tRNA-His K14226 tRNA-His; tRNA His D JHS3_t00200 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00280 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00330 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00450 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00480 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JHS3_t00550 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JHS3_t00340 tRNA-Met K14230 tRNA-Met; tRNA Met D JHS3_t00460 tRNA-Met K14230 tRNA-Met; tRNA Met D JHS3_t00510 tRNA-Met K14230 tRNA-Met; tRNA Met D JHS3_t00580 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D JHS3_t00080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHS3_t00410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHS3_t00490 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHS3_t00090 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHS3_t00120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHS3_t00170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHS3_t00310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHS3_t00260 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHS3_t00530 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHS3_t00560 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHS3_t00610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHS3_t00620 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D JHS3_t00590 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JHS3_t00070 tRNA-Val K14237 tRNA-Val; tRNA Val D JHS3_t00140 tRNA-Val K14237 tRNA-Val; tRNA Val D JHS3_t00240 tRNA-Val K14237 tRNA-Val; tRNA Val D JHS3_17260 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHS3_30930 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JHS3_30920 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D JHS3_30950 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D JHS3_14610 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D JHS3_05740 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JHS3_02390 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JHS3_29800 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JHS3_29820 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JHS3_02910 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JHS3_06610 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JHS3_10370 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JHS3_06910 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JHS3_10680 formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D JHS3_21470 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D JHS3_30570 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JHS3_22570 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JHS3_10110 ileS1; isoleucine--tRNA ligase 1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JHS3_10490 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JHS3_01070 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JHS3_18350 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JHS3_13900 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JHS3_02950 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JHS3_02960 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JHS3_28750 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JHS3_09440 trpS_1; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHS3_19440 trpS-1; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHS3_19450 trpS_2; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:jes03008] D JHS3_07460 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D JHS3_05670 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:jes03060] D JHS3_00220 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JHS3_31780 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JHS3_02740 hypothetical protein K03075 secG; preprotein translocase subunit SecG D JHS3_04940 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JHS3_04950 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D JHS3_04930 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JHS3_25340 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHS3_24340 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JHS3_20100 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D JHS3_00390 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JHS3_26510 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D JHS3_05500 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D JHS3_28940 tatE; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D JHS3_28950 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D JHS3_28960 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D JHS3_07440 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D JHS3_10100 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum D JHS3_16780 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:jes04122] D JHS3_01260 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JHS3_12180 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JHS3_26020 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D JHS3_00540 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D JHS3_29040 moaE; molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D JHS3_29080 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D JHS3_29050 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D JHS3_19430 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D JHS3_07530 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D JHS3_20540 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:jes03018] D JHS3_21780 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D JHS3_03210 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D JHS3_09660 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHS3_08660 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D JHS3_01150 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JHS3_12880 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JHS3_25200 rhlE; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JHS3_07120 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JHS3_01060 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JHS3_14790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D JHS3_19580 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D JHS3_20920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHS3_13860 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D JHS3_24860 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JHS3_20840 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:jes03030] D JHS3_19040 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_19510 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_12020 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHS3_03960 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHS3_16160 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHS3_22590 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHS3_21190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHS3_25310 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHS3_10230 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D JHS3_17680 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D JHS3_19230 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHS3_19050 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JHS3_09250 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D JHS3_24760 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHS3_11000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:jes03410] D JHS3_19810 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JHS3_09320 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D JHS3_01480 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D JHS3_28540 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D JHS3_07570 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D JHS3_02310 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D JHS3_06130 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D JHS3_18280 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D JHS3_25160 exoA; exodeoxyribonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D JHS3_24760 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHS3_08720 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JHS3_11000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:jes03420] D JHS3_10260 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D JHS3_19260 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D JHS3_01720 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D JHS3_10880 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D JHS3_21650 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHS3_24760 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHS3_11000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:jes03430] D JHS3_10630 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D JHS3_00780 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D JHS3_21650 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHS3_19940 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D JHS3_00600 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D JHS3_04320 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D JHS3_08720 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JHS3_19230 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHS3_12020 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHS3_25310 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHS3_03960 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHS3_22590 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHS3_16160 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHS3_19040 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_19510 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_21190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHS3_11000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:jes03440] D JHS3_08720 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JHS3_19230 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHS3_07480 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D JHS3_03940 recR; recombination protein RecR K06187 recR; recombination protein RecR D JHS3_05800 recA; protein RecA K03553 recA; recombination protein RecA D JHS3_24760 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHS3_26680 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D JHS3_26660 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D JHS3_26690 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D JHS3_18630 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JHS3_12020 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHS3_25310 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHS3_03960 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHS3_22590 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHS3_16160 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHS3_19040 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_19510 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_21190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHS3_14570 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D JHS3_11800 priB; primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:jes03250] D JHS3_18960 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:jes02010] D JHS3_23580 cysP_1; sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D JHS3_23730 cysP_2; sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D JHS3_23570 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D JHS3_23560 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D JHS3_23550 cysA2; sulfate/thiosulfate import ATP-binding protein CysA 2 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D JHS3_03460 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D JHS3_03440 tauC; taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D JHS3_03450 tauB; taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D JHS3_03570 ssuA; nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_15870 astR; aryl sulfate ester ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_23670 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_23680 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_03590 ssuC_1; ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JHS3_15850 hypothetical protein K15554 ssuC; sulfonate transport system permease protein D JHS3_15860 hypothetical protein K15554 ssuC; sulfonate transport system permease protein D JHS3_23650 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JHS3_15840 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JHS3_23640 ssuB1; aliphatic sulfonates import ATP-binding protein SsuB 1 K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JHS3_15100 modB_1; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D JHS3_15120 modB_2; molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D JHS3_15130 modC; GTPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D JHS3_06390 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHS3_06820 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHS3_12260 putative binding protein component of ABC iron transporter K02012 afuA; iron(III) transport system substrate-binding protein D JHS3_06420 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHS3_06810 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHS3_12250 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHS3_06410 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHS3_06800 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHS3_12240 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHS3_29960 potD_1; polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D JHS3_29970 potD_2; polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D JHS3_29950 potC; polyamine transporter PotC K11070 potC; spermidine/putrescine transport system permease protein D JHS3_29940 potB; polyamine transporter PotB K11071 potB; spermidine/putrescine transport system permease protein D JHS3_29930 potA2; spermidine/putrescine import ATP-binding protein PotA 2 K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D JHS3_19720 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D JHS3_19710 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHS3_19730 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHS3_19700 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JHS3_18070 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHS3_30620 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHS3_03930 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHS3_30650 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D JHS3_30640 ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D JHS3_30630 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D JHS3_18100 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D JHS3_18110 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D JHS3_18090 lactose ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein D JHS3_05050 ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D JHS3_18080 ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D JHS3_29220 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D JHS3_01880 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D JHS3_09090 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D JHS3_29230 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D JHS3_01900 glycoprotein endopeptidase metalloprotease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D JHS3_09070 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D JHS3_29240 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D JHS3_29210 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D JHS3_01890 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D JHS3_09080 hypothetical protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D JHS3_29250 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D JHS3_03900 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D JHS3_30660 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D JHS3_03910 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D JHS3_03920 maltose ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D JHS3_01400 sugar-binding exported protein K10439 rbsB; ribose transport system substrate-binding protein D JHS3_17930 rbsB; D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D JHS3_01420 hypothetical protein K10440 rbsC; ribose transport system permease protein D JHS3_17920 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D JHS3_01410 rbsA_1; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D JHS3_17910 rbsA_2; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D JHS3_17900 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D JHS3_02720 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D JHS3_02710 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D JHS3_02700 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D JHS3_02690 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JHS3_18520 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JHS3_21360 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D JHS3_21380 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D JHS3_21370 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D JHS3_21390 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D JHS3_27130 cysteine ABC transporter K02424 tcyA; L-cystine transport system substrate-binding protein D JHS3_27120 cysteine ABC transporter K10009 tcyB; L-cystine transport system permease protein D JHS3_04500 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHS3_12460 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHS3_04490 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHS3_12480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHS3_04480 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHS3_12490 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D JHS3_04470 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHS3_12500 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHS3_04460 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHS3_12510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHS3_16070 TonB-dependent receptor K02073 metQ; D-methionine transport system substrate-binding protein D JHS3_16060 D-methionine ABC transporter K02072 metI; D-methionine transport system permease protein D JHS3_16050 metN1; methionine import ATP-binding protein MetN 1 K02071 metN; D-methionine transport system ATP-binding protein D JHS3_06160 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D JHS3_06190 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D JHS3_06200 ABC transporter permease K13895 yejE; microcin C transport system permease protein D JHS3_06230 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D JHS3_11500 lipoprotein releasing system protein K09808 lolC_E_F; lipoprotein-releasing system permease protein D JHS3_11510 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D JHS3_21170 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D JHS3_21160 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D JHS3_29550 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D JHS3_26540 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D JHS3_26530 ftsE; ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D JHS3_26290 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D JHS3_10520 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D JHS3_27810 putative ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D JHS3_03030 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JHS3_02220 macB; macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D JHS3_14590 ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:jes02060] D JHS3_23040 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D JHS3_23030 ptsH_1; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D JHS3_25680 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D JHS3_07900 nagE; PTS N-acetylglucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D JHS3_23020 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JHS3_18420 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D JHS3_18450 agaV; N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D JHS3_18440 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D JHS3_18430 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D JHS3_13380 agaB; PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D JHS3_13390 agaC; N-acetylgalactosamine permease IIC component 1 K10985 agaC; galactosamine PTS system EIIC component D JHS3_13400 hypothetical protein K10986 agaD; galactosamine PTS system EIID component D JHS3_16560 PTS fructose transporter subunit IIA K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D JHS3_16550 PTS sugar transporter K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D JHS3_16540 PTS sorbose transporter subunit IIC K17466 dgaC; D-glucosaminate PTS system EIIC component D JHS3_16530 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D JHS3_10430 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D JHS3_10440 ulaA; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D JHS3_25670 phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D JHS3_29580 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:jes03070] D JHS3_21670 outer membrane protein K12340 tolC; outer membrane protein D JHS3_06550 xcpQ; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D JHS3_17840 hypothetical protein K02453 gspD; general secretion pathway protein D D JHS3_06540 hypothetical protein K02452 gspC; general secretion pathway protein C D JHS3_13670 gspF_1; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D JHS3_17780 gspF_2; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D JHS3_13660 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D JHS3_17770 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D JHS3_17850 pulG; type II secretion system pseudopilin PulG K02456 gspG; general secretion pathway protein G D JHS3_17860 oxpG; type II secretion system pseudopilin OxpG K02456 gspG; general secretion pathway protein G D JHS3_13650 hypothetical protein K02457 gspH; general secretion pathway protein H D JHS3_13640 hypothetical protein K02458 gspI; general secretion pathway protein I D JHS3_13630 xcpW; type II secretion system protein J K02459 gspJ; general secretion pathway protein J D JHS3_13620 xcpX; type II secretion system protein K K02460 gspK; general secretion pathway protein K D JHS3_14530 hypothetical protein K02461 gspL; general secretion pathway protein L D JHS3_14540 epsM; type II secretion system protein M K02462 gspM; general secretion pathway protein M D JHS3_06560 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D JHS3_17790 pulE; type II secretion system ATPase PulE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D JHS3_04940 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JHS3_04950 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D JHS3_31780 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JHS3_02740 hypothetical protein K03075 secG; preprotein translocase subunit SecG D JHS3_00220 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JHS3_04930 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JHS3_25340 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHS3_24340 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JHS3_26510 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D JHS3_20100 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D JHS3_00390 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JHS3_05500 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D JHS3_28940 tatE; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D JHS3_28950 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D JHS3_28960 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D JHS3_15510 hypothetical protein K11892 impK; type VI secretion system protein ImpK B B 09132 Signal transduction C 02020 Two-component system [PATH:jes02020] D JHS3_30070 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JHS3_30060 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D JHS3_02720 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D JHS3_24450 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D JHS3_24440 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D JHS3_07410 peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D JHS3_15010 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D JHS3_02170 multidrug transporter K07799 mdtA; membrane fusion protein, multidrug efflux system D JHS3_02180 resistance-nodulation-cell division (RND) efflux transporter K07788 mdtB; multidrug efflux pump D JHS3_02190 mdtC; multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump D JHS3_06270 mdtD; putative multidrug resistance protein MdtD K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D JHS3_00850 heavy metal RND transporter K07796 cusC; outer membrane protein, copper/silver efflux system D JHS3_00840 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system D JHS3_00830 cation transporter K07787 cusA; copper/silver efflux system protein D JHS3_26000 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D JHS3_26010 pmrA; DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D JHS3_10970 fliC; flagellin K02406 fliC; flagellin D JHS3_01860 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D JHS3_01850 motA-1; flagellar motor protein K02556 motA; chemotaxis protein MotA D JHS3_09260 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D JHS3_04760 kdpD; two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D JHS3_04770 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D JHS3_04540 kdpA; potassium-transporting ATPase potassium-binding subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D JHS3_04530 kdpB; potassium-transporting ATPase ATP-binding subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D JHS3_04520 kdpC; potassium-transporting ATPase KdpC subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D JHS3_06840 tctE; sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D JHS3_06830 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D JHS3_24290 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D JHS3_25320 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JHS3_23900 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D JHS3_25440 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D JHS3_26840 algZ; alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D JHS3_26830 algR; DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D JHS3_01370 sensor histidine kinase K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D JHS3_01360 DNA-binding response regulator K27883 btsR; two-component system, LytTR family, low-concentration pyruvate response regulator D JHS3_29020 nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D JHS3_29010 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D JHS3_17400 narG_1; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28810 narG_2; respiratory nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D JHS3_17390 narH_1; respiratory nitrate reductase subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28820 narH_2; respiratory nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D JHS3_17370 narI_1; respiratory nitrate reductase subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28840 narI_2; nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D JHS3_17380 narJ_1; respiratory nitrate reductase subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D JHS3_28830 narJ_2; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D JHS3_16410 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D JHS3_05830 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D JHS3_05840 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D JHS3_05870 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D JHS3_05850 hypothetical protein K07346 fimC; fimbrial chaperone protein D JHS3_05860 hypothetical protein K07347 fimD; outer membrane usher protein D JHS3_28490 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D JHS3_28470 membrane fimbriae assembly protein K02279 cpaB; pilus assembly protein CpaB D JHS3_28460 exported fimbriae assembly protein K02280 cpaC; pilus assembly protein CpaC D JHS3_28450 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D JHS3_28440 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D JHS3_28430 hypothetical protein K12510 tadB; tight adherence protein B D JHS3_28420 hypothetical protein K12511 tadC; tight adherence protein C D JHS3_28410 hypothetical protein K27079 tadD; tight adherence protein D D JHS3_28390 hypothetical protein K27080 tadG; tight adherence protein G D JHS3_11420 glnD; bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D JHS3_14560 glnB; nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1 D JHS3_30100 ntrB; signal transduction histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JHS3_30090 ntrC; sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D JHS3_24160 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_30190 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_21510 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JHS3_21520 ntrX; Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_20170 dctB; two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHS3_20160 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D JHS3_21770 pilS; sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D JHS3_21760 pilR; type 4 fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D JHS3_29560 rpoN_1; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D JHS3_24570 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D JHS3_16830 two-component sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D JHS3_16810 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D JHS3_14390 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D JHS3_00520 mcp40H-5; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_01730 mcp40H-19_1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_02320 mcp40H-19_2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_06030 mcp40H-19_3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_08080 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_10500 mcp40H-19_4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_13350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_16650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_18270 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D JHS3_27740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_30490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_06240 aer-1; aerotaxis receptor K03776 aer; aerotaxis receptor D JHS3_15680 cheA; chemotaxis protein A K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JHS3_15660 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JHS3_15600 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D JHS3_15640 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JHS3_15650 cheV; chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JHS3_28730 pilJ; protein PilJ K02660 pilJ; twitching motility protein PilJ D JHS3_28720 hypothetical protein K02659 pilI; twitching motility protein PilI D JHS3_28740 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D JHS3_28700 pilG; response regulator K02657 pilG; twitching motility two-component system response regulator PilG D JHS3_28710 pilH; protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D JHS3_29720 dctR_2; DNA-binding response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR D JHS3_15630 fleS; PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D JHS3_15590 fleR; sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D JHS3_21390 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D JHS3_21380 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D JHS3_21370 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D JHS3_21360 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D JHS3_12640 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JHS3_18290 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JHS3_29460 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D JHS3_29450 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JHS3_29440 cytochrome C1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D JHS3_12720 nirM_1; cytochrome c-551 K08738 CYC; cytochrome c D JHS3_26710 nirM_2; cytochrome c-551 K08738 CYC; cytochrome c D JHS3_10070 cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D JHS3_10060 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D JHS3_10050 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D JHS3_10040 hypothetical protein K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D JHS3_15800 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D JHS3_17310 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D JHS3_15790 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D JHS3_17300 cytochrome oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D JHS3_15780 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D JHS3_21670 outer membrane protein K12340 tolC; outer membrane protein D JHS3_04030 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D JHS3_22740 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D JHS3_07670 ptpA; phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D JHS3_12990 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D JHS3_15610 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D JHS3_15620 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D JHS3_08510 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome [PATH:jes04142] D JHS3_16870 chb_1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_17210 chb_2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_29860 chb_3; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_23770 sumF1; protein kinase K13444 SUMF1; formylglycine-generating enzyme [EC:1.8.3.7] C 04146 Peroxisome [PATH:jes04146] D JHS3_08590 fadD-2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D JHS3_27220 hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D JHS3_25210 agxT; serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHS3_00500 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JHS3_01290 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D JHS3_17250 sodC2; superoxide dismutase [Cu-Zn] K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D JHS3_17750 sodB; superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D JHS3_29460 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:jes02024] D JHS3_13860 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D JHS3_12060 trpE_1; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JHS3_12070 pabA; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D JHS3_26740 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D JHS3_26000 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D JHS3_26010 pmrA; DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D JHS3_16830 two-component sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D JHS3_16810 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D JHS3_04770 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D JHS3_04500 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHS3_12460 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHS3_04490 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHS3_12480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHS3_04480 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHS3_12490 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D JHS3_04470 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHS3_12500 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHS3_04460 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHS3_12510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHS3_08590 fadD-2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D JHS3_12640 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JHS3_18290 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JHS3_17420 hypothetical protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D JHS3_07760 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D JHS3_22910 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D JHS3_02200 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_02230 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_09520 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_09580 cusC; adeC/adeK/oprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_27280 yjcP; multidrug resistance transporter K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_30350 adeC/adeK/oprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_25340 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHS3_31780 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JHS3_02740 hypothetical protein K03075 secG; preprotein translocase subunit SecG D JHS3_00220 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JHS3_04930 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JHS3_24340 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JHS3_26510 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D JHS3_20100 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D JHS3_00390 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JHS3_22860 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:jes02030] D JHS3_00520 mcp40H-5; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_01730 mcp40H-19_1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_02320 mcp40H-19_2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_06030 mcp40H-19_3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_08080 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_10500 mcp40H-19_4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_13350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_16650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_18270 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D JHS3_27740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_30490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_06240 aer-1; aerotaxis receptor K03776 aer; aerotaxis receptor D JHS3_01400 sugar-binding exported protein K10439 rbsB; ribose transport system substrate-binding protein D JHS3_17930 rbsB; D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D JHS3_15680 cheA; chemotaxis protein A K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JHS3_15660 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JHS3_15670 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D JHS3_15600 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D JHS3_15640 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JHS3_15650 cheV; chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JHS3_14390 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D JHS3_15560 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D JHS3_01990 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D JHS3_02000 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D JHS3_01850 motA-1; flagellar motor protein K02556 motA; chemotaxis protein MotA D JHS3_09260 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D JHS3_03260 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D JHS3_09270 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:jes02040] D JHS3_15580 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D JHS3_15570 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D JHS3_15560 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D JHS3_15550 hypothetical protein K02411 fliH; flagellar assembly protein FliH D JHS3_15540 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JHS3_15530 fliJ; flagellar FliJ protein K02413 fliJ; flagellar protein FliJ D JHS3_01970 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D JHS3_01980 hypothetical protein K02415 fliL; flagellar protein FliL D JHS3_01990 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D JHS3_02000 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D JHS3_02010 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D JHS3_02020 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JHS3_02030 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JHS3_02040 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JHS3_01950 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JHS3_01960 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JHS3_10140 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D JHS3_14920 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D JHS3_14910 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D JHS3_14900 basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D JHS3_14890 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D JHS3_14880 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D JHS3_14870 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D JHS3_14860 hypothetical protein K02393 flgH; flagellar L-ring protein FlgH D JHS3_14850 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D JHS3_14840 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D JHS3_14830 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D JHS3_14820 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D JHS3_10970 fliC; flagellin K02406 fliC; flagellin D JHS3_10950 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D JHS3_10940 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D JHS3_01850 motA-1; flagellar motor protein K02556 motA; chemotaxis protein MotA D JHS3_09260 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D JHS3_03260 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D JHS3_09270 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D JHS3_08510 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D JHS3_08500 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D JHS3_27130 cysteine ABC transporter K02424 tcyA; L-cystine transport system substrate-binding protein D JHS3_17670 alt; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D JHS3_29560 rpoN_1; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D JHS3_15590 fleR; sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D JHS3_01860 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D JHS3_09660 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:jes04981] D JHS3_25660 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D JHS3_10560 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D JHS3_07730 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JHS3_10580 hypothetical protein K00560 thyA; thymidylate synthase [EC:2.1.1.45] D JHS3_27670 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism [PATH:jes04980] D JHS3_07090 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D JHS3_27670 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation D JHS3_31240 hutH-1; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:jes01501] D JHS3_25170 ampG; AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D JHS3_16410 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D JHS3_07870 nolF; nolF secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09540 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09560 acrA_1; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_30370 acrA_2; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_07860 nolG; nodulation protein NolG K18138 acrB; multidrug efflux pump D JHS3_09530 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_09570 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_30360 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_02200 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_02230 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_09520 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_09580 cusC; adeC/adeK/oprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_27280 yjcP; multidrug resistance transporter K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_30350 adeC/adeK/oprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_21670 outer membrane protein K12340 tolC; outer membrane protein D JHS3_22310 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JHS3_30990 mrdA; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JHS3_26140 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:jes01502] D JHS3_23900 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D JHS3_26220 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JHS3_03370 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JHS3_26160 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D JHS3_26170 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JHS3_26200 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JHS3_25440 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:jes01503] D JHS3_10670 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D JHS3_06580 hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D JHS3_18380 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHS3_18770 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHS3_07410 peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D JHS3_15010 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D JHS3_27390 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D JHS3_18960 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D JHS3_07870 nolF; nolF secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09540 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09560 acrA_1; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_30370 acrA_2; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_07860 nolG; nodulation protein NolG K18138 acrB; multidrug efflux pump D JHS3_09530 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_09570 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_30360 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_21670 outer membrane protein K12340 tolC; outer membrane protein D JHS3_09230 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:jes01000] C 01001 Protein kinases [BR:jes01001] D JHS3_30070 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JHS3_24450 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D JHS3_26000 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D JHS3_04760 kdpD; two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D JHS3_06840 tctE; sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D JHS3_15040 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D JHS3_29020 nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D JHS3_26840 algZ; alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D JHS3_01370 sensor histidine kinase K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D JHS3_30100 ntrB; signal transduction histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JHS3_21510 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JHS3_21770 pilS; sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D JHS3_16830 two-component sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D JHS3_20170 dctB; two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHS3_15680 cheA; chemotaxis protein A K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JHS3_28740 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D JHS3_15630 fleS; PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:jes01009] D JHS3_23230 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHS3_16780 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D JHS3_20600 stp; protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D JHS3_30230 prpC_2; protein phosphatase PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D JHS3_10240 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:jes01002] D JHS3_10100 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D JHS3_00340 gspO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D JHS3_07750 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JHS3_16040 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JHS3_24150 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase D JHS3_11660 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D JHS3_31530 gltB_1; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHS3_31550 gltB_2; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JHS3_30430 glmS_2; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JHS3_14370 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D JHS3_06070 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D JHS3_16190 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D JHS3_25440 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D JHS3_23900 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D JHS3_21180 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D JHS3_08550 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JHS3_12810 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D JHS3_11410 map-1; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D JHS3_16910 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D JHS3_20350 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D JHS3_02660 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D JHS3_13290 peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D JHS3_21480 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D JHS3_02560 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D JHS3_09180 putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D JHS3_17150 impA; immunomodulating metalloprotease K21429 impA; immunomodulating metalloprotease D JHS3_01540 hypothetical protein K09933 mtfA; MtfA peptidase D JHS3_24470 ydgD; serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-] D JHS3_07410 peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D JHS3_15010 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D JHS3_29490 DegQ protease K04772 degQ; serine protease DegQ [EC:3.4.21.-] D JHS3_20860 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JHS3_12220 hypothetical protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D JHS3_03980 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D JHS3_14510 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D JHS3_14490 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D JHS3_10000 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D JHS3_07440 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D JHS3_19410 prc; peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D JHS3_03250 peptidase K04773 sppA; protease IV [EC:3.4.21.-] D JHS3_05690 hypothetical protein K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D JHS3_20440 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D JHS3_16940 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JHS3_17350 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D JHS3_22750 protease K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D JHS3_27360 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D JHS3_27350 hypothetical protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D JHS3_07560 peptidase C69 K03592 pmbA; PmbA protein D JHS3_02440 peptidase C69 K03568 tldD; TldD protein D JHS3_09360 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin D JHS3_13830 hflC; protein HflC K04087 hflC; modulator of FtsH protease HflC D JHS3_13840 hflK; protease modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:jes01003] D JHS3_01570 glycosyl transferase K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D JHS3_25070 bcsA; cellulose synthase catalytic subunit (UDP-forming) K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D JHS3_30220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_09370 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D JHS3_22310 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JHS3_26190 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_31000 mrdB; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_24420 pelF; pellicle/biofilm biosynthesis glycosyltransferase PelF K21011 pelF; polysaccharide biosynthesis protein PelF C 01005 Lipopolysaccharide biosynthesis proteins [BR:jes01005] D JHS3_09230 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D JHS3_09240 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D JHS3_26260 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D JHS3_09210 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D JHS3_18990 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D JHS3_00630 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D JHS3_19670 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JHS3_23070 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JHS3_23080 acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JHS3_23800 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D JHS3_09650 kdsA1; 2-dehydro-3-deoxyphosphooctonate aldolase 1 K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D JHS3_00650 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D JHS3_29520 hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D JHS3_29510 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D JHS3_10710 waaE; ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D JHS3_20070 hypothetical protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D JHS3_23810 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D JHS3_17110 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D JHS3_26350 glycosyl transferase family 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D JHS3_26340 putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D JHS3_00900 gmhA_1; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D JHS3_30940 gmhA_2; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D JHS3_29830 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D JHS3_09350 hldD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D JHS3_23530 gtrB; glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:jes01011] D JHS3_29140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JHS3_21580 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JHS3_26210 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D JHS3_26180 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JHS3_26150 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JHS3_26220 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JHS3_03370 dadX; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JHS3_18710 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D JHS3_26170 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JHS3_26200 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JHS3_24310 uppP2; undecaprenyl-diphosphatase 2 K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JHS3_17580 mviN; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D JHS3_22310 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JHS3_09370 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D JHS3_30990 mrdA; penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JHS3_26140 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JHS3_20860 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JHS3_03980 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D JHS3_12220 hypothetical protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D JHS3_30220 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_26190 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_31000 mrdB; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_23900 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D JHS3_25440 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D JHS3_29770 transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D JHS3_12050 membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D JHS3_10310 murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D JHS3_19090 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D JHS3_17270 mltF; membrane-bound lytic murein transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D JHS3_03170 lipoprotein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D JHS3_31010 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D JHS3_18380 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHS3_18770 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHS3_21750 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:jes01004] D JHS3_17490 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JHS3_17500 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D JHS3_31180 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JHS3_17460 fabF-1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHS3_31150 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JHS3_14670 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_17480 fabG_2; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_31160 fabG_3; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JHS3_09220 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JHS3_18820 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHS3_27650 fabI1; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JHS3_00960 tesA; arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D JHS3_01500 thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D JHS3_20050 aminotransferase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D JHS3_01760 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JHS3_08590 fadD-2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D JHS3_17510 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D JHS3_12600 plsY; glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JHS3_00300 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JHS3_29840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:jes01008] D JHS3_14230 dhbB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D JHS3_14280 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D JHS3_14220 dhbE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D JHS3_14240 hypothetical protein K15653 mxcG; nonribosomal peptide synthetase MxcG D JHS3_14190 aminotransferase class III K15681 mxcL; aminotransferase MxcL C 01006 Prenyltransferases [BR:jes01006] D JHS3_04330 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D JHS3_22460 ispB; octaprenyl-diphosphate synthase IspB K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D JHS3_09150 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JHS3_03120 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D JHS3_00760 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D JHS3_20240 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D JHS3_24300 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:jes01007] D JHS3_17260 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHS3_14610 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D JHS3_11770 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D JHS3_28750 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JHS3_09440 trpS_1; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHS3_19440 trpS-1; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHS3_19450 trpS_2; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHS3_10370 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JHS3_01070 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JHS3_06910 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JHS3_10110 ileS1; isoleucine--tRNA ligase 1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JHS3_30570 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JHS3_22570 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JHS3_10490 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JHS3_02390 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JHS3_13900 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JHS3_29800 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JHS3_29820 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JHS3_06610 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JHS3_18350 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JHS3_02910 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JHS3_05740 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JHS3_02950 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JHS3_02960 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JHS3_18020 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D JHS3_09970 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D JHS3_06720 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_17560 hisC1; histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JHS3_20140 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D JHS3_27110 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JHS3_11340 argD; acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D JHS3_24170 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D JHS3_21000 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D JHS3_25530 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D JHS3_14190 aminotransferase class III K15681 mxcL; aminotransferase MxcL D JHS3_20870 cytochrome c550 K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JHS3_17080 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JHS3_06430 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D JHS3_25210 agxT; serine--pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D JHS3_06680 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:jes00194] D JHS3_24940 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D JHS3_24950 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D JHS3_24960 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D JHS3_24970 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D JHS3_24980 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D JHS3_24990 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JHS3_25000 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D JHS3_25010 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JHS3_25020 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:jes03000] D JHS3_25280 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D JHS3_19790 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D JHS3_25470 hypothetical protein K13652 K13652; AraC family transcriptional regulator D JHS3_24030 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D JHS3_31610 ftrA; transcriptional activator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D JHS3_09840 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D JHS3_30530 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D JHS3_20400 metR; LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D JHS3_13980 oxyR; LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D JHS3_05080 iciA; transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D JHS3_14340 transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D JHS3_18160 transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D JHS3_29900 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D JHS3_18480 agaR; DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D JHS3_17880 sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D JHS3_08480 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D JHS3_12150 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D JHS3_18120 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D JHS3_07920 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D JHS3_05990 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D JHS3_24800 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHS3_27290 hypothetical protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D JHS3_30690 merR; mercuric resistance operon regulatory protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D JHS3_08280 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D JHS3_16240 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D JHS3_26730 transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D JHS3_12640 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JHS3_18290 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JHS3_11990 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D JHS3_01270 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D JHS3_13170 DNA-binding protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D JHS3_27200 DNA-binding protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D JHS3_14170 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D JHS3_17060 transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D JHS3_03810 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D JHS3_31090 Fis family DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D JHS3_16570 transcriptional regulator K17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator D JHS3_25970 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D JHS3_04510 putA_1; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHS3_12470 putA_2; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D JHS3_07620 csoR; copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D JHS3_12550 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D JHS3_15330 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHS3_25030 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHS3_10320 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D JHS3_20700 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D JHS3_14070 hypothetical protein K07733 alpA; prophage regulatory protein D JHS3_27050 transcriptional regulator K07734 paiB; transcriptional regulator D JHS3_30870 UPF0301 protein K07735 algH; putative transcriptional regulator D JHS3_26720 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D JHS3_07740 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D JHS3_26110 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:jes03021] D JHS3_00270 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JHS3_31840 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JHS3_31850 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JHS3_20560 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JHS3_17670 alt; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D JHS3_09950 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D JHS3_07370 sigE; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D JHS3_26550 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D JHS3_29560 rpoN_1; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D JHS3_01860 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D JHS3_08610 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D JHS3_07810 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D JHS3_31790 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D JHS3_29430 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D JHS3_29420 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B D JHS3_26720 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D JHS3_02620 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D JHS3_10600 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D JHS3_14790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:jes03019] D JHS3_03210 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D JHS3_22600 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D JHS3_07460 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D JHS3_07120 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JHS3_05670 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D JHS3_01150 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JHS3_12880 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JHS3_25200 rhlE; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JHS3_01060 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JHS3_09660 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHS3_08660 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D JHS3_14790 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D JHS3_19580 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D JHS3_20920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHS3_13860 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D JHS3_24860 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JHS3_20840 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D JHS3_21780 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D JHS3_29600 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ D JHS3_06520 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:jes03011] D JHS3_10770 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D JHS3_09110 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D JHS3_00080 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D JHS3_00260 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D JHS3_00190 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D JHS3_11790 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D JHS3_31870 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D JHS3_00160 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D JHS3_18910 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D JHS3_00010 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D JHS3_00250 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D JHS3_31860 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D JHS3_00240 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D JHS3_00150 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JHS3_08650 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D JHS3_00400 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D JHS3_00110 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D JHS3_11810 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D JHS3_00060 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D JHS3_17590 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D JHS3_17700 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D JHS3_31810 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D JHS3_00050 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D JHS3_00020 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D JHS3_00030 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D JHS3_00140 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D JHS3_00170 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D JHS3_11820 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D JHS3_31820 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D JHS3_31800 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D JHS3_31830 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D JHS3_18920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D JHS3_00120 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D JHS3_00210 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D JHS3_00090 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D JHS3_00280 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D JHS3_00180 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D JHS3_00430 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D JHS3_02940 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D JHS3_22450 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D JHS3_00070 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D JHS3_00040 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D JHS3_00130 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D JHS3_22440 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D JHS3_01820 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D JHS3_00100 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D JHS3_00200 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D JHS3_14780 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D JHS3_17520 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D JHS3_01810 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D JHS3_02930 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D JHS3_28590 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D JHS3_r00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:jes03009] D JHS3_07460 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D JHS3_05670 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D JHS3_07470 era; GTPase Era K03595 era; GTPase D JHS3_22430 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D JHS3_26720 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D JHS3_08610 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D JHS3_07810 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D JHS3_31790 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D JHS3_27300 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D JHS3_21340 ksgA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D JHS3_21490 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D JHS3_29410 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D JHS3_26500 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D JHS3_26280 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D JHS3_25050 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D JHS3_26120 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D JHS3_00870 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D JHS3_17550 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D JHS3_01530 rsmJ; ribosomal RNA small subunit methyltransferase J K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D JHS3_28980 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D JHS3_10300 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D JHS3_02650 rlmE; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D JHS3_23970 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D JHS3_27990 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D JHS3_15090 rlmJ; ribosomal RNA large subunit methyltransferase J K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D JHS3_19520 rlmK; ribosomal RNA large subunit methyltransferase K K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264] D JHS3_22370 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D JHS3_06760 rlmM; ribosomal RNA large subunit methyltransferase M K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D JHS3_13940 rlmN; dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D JHS3_16990 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D JHS3_01940 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JHS3_23960 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JHS3_27780 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JHS3_10610 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D JHS3_03220 rluC; pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D JHS3_02090 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D JHS3_00510 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D JHS3_04390 RNA pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D JHS3_28990 RNA pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D JHS3_06140 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D JHS3_00410 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D JHS3_08690 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D JHS3_25250 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D JHS3_04850 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D JHS3_01140 prmB; 50S ribosomal protein L3 glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D JHS3_05470 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D JHS3_03210 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D JHS3_22600 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D JHS3_30880 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D JHS3_03090 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D JHS3_13310 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D JHS3_13870 der; GTPase Der K03977 engA; GTPase D JHS3_25620 ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A D JHS3_13850 hflX; GTPase HflX K03665 hflX; GTPase D JHS3_12650 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D JHS3_20550 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D JHS3_08630 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D JHS3_08600 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D JHS3_27880 RNA-binding protein K14761 rlbA; ribosome-associated protein D JHS3_24500 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D JHS3_21960 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D JHS3_02640 hypothetical protein K07574 yhbY; RNA-binding protein D JHS3_07550 UPF0307 protein K09889 yjgA; ribosome-associated protein D JHS3_29570 rpoN_2; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D JHS3_24900 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:jes03016] D JHS3_26470 cca; multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D JHS3_17260 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHS3_18350 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JHS3_10110 ileS1; isoleucine--tRNA ligase 1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JHS3_22570 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JHS3_06910 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JHS3_14610 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D JHS3_01070 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JHS3_10490 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JHS3_02390 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JHS3_05740 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JHS3_02910 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JHS3_06610 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JHS3_10370 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JHS3_30570 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JHS3_13900 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JHS3_02950 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JHS3_02960 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JHS3_28750 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JHS3_09440 trpS_1; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHS3_19440 trpS-1; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHS3_19450 trpS_2; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JHS3_29660 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D JHS3_28930 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D JHS3_20490 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D JHS3_18550 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D JHS3_11740 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D JHS3_08640 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D JHS3_01260 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JHS3_12650 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D JHS3_00760 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D JHS3_25370 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D JHS3_25060 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D JHS3_25330 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D JHS3_20610 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D JHS3_31450 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D JHS3_05150 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D JHS3_29800 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JHS3_29820 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JHS3_11770 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D JHS3_10350 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D JHS3_20620 dusA; tRNA-dihydrouridine(20/20a) synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D JHS3_31080 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D JHS3_10010 dusC; tRNA-dihydrouridine(16) synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D JHS3_21910 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D JHS3_11170 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D JHS3_00420 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D JHS3_13710 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D JHS3_09300 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D JHS3_05180 truC; tRNA pseudouridine synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D JHS3_01940 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JHS3_23960 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JHS3_27780 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JHS3_00540 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D JHS3_21800 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D JHS3_26020 response regulator SirA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D JHS3_01240 HesB family protein K13628 iscA; iron-sulfur cluster assembly protein D JHS3_18810 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D JHS3_09710 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D JHS3_04890 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D JHS3_26560 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D JHS3_29990 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D JHS3_26580 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D JHS3_09990 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D JHS3_18750 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D JHS3_04920 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D JHS3_08540 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D JHS3_06150 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D JHS3_17710 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D JHS3_18760 bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE/phosphotransferase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D JHS3_08700 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D JHS3_07120 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JHS3_08660 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:jes03012] D JHS3_28270 yciH; translation initiation factor K03113 EIF1; translation initiation factor 1 D JHS3_08620 hypothetical protein K02519 infB; translation initiation factor IF-2 D JHS3_02920 hypothetical protein K02520 infC; translation initiation factor IF-3 D JHS3_10450 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D JHS3_09120 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D JHS3_31770 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHS3_04360 elongation factor G K02355 fusA; elongation factor G D JHS3_31880 fusA2; elongation factor G 2 K02355 fusA; elongation factor G D JHS3_31380 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D JHS3_09140 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor D JHS3_22940 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D JHS3_28610 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D JHS3_00230 infA_1; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D JHS3_13080 infA_2; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D JHS3_17610 efp; elongation factor P K02356 efp; elongation factor P D JHS3_10480 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D JHS3_11460 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D JHS3_13110 peptidyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:jes03110] D JHS3_00470 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D JHS3_06260 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D JHS3_14500 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D JHS3_27620 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D JHS3_16780 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D JHS3_19580 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D JHS3_01220 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA D JHS3_28070 yegD; heat-shock protein K04046 yegD; hypothetical chaperone protein D JHS3_20920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHS3_19570 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D JHS3_01230 hscB; co-chaperone protein HscB K04082 hscB; molecular chaperone HscB D JHS3_05710 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33 D JHS3_19600 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D JHS3_06350 heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D JHS3_20930 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D JHS3_07410 peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D JHS3_15010 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D JHS3_02660 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D JHS3_25010 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JHS3_05850 hypothetical protein K07346 fimC; fimbrial chaperone protein D JHS3_20100 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D JHS3_26080 nuclear export factor GLE1 K09796 pccA; periplasmic copper chaperone A D JHS3_31490 hypothetical protein K09796 pccA; periplasmic copper chaperone A D JHS3_16870 chb_1; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_17210 chb_2; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_29860 chb_3; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D JHS3_18960 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D JHS3_18970 ppiB; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D JHS3_14470 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D JHS3_05490 slyD; peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D JHS3_25260 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D JHS3_12540 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D JHS3_17360 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D JHS3_29090 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D JHS3_21320 surA; chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D JHS3_14800 trxA; thioredoxin K03671 TXN; thioredoxin D JHS3_12230 thiol reductase thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D JHS3_20090 grx3; glutaredoxin K03676 grxC; glutaredoxin 3 D JHS3_22930 glutaredoxin K07390 grxD; monothiol glutaredoxin D JHS3_27390 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D JHS3_16710 protein disulfide-isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D JHS3_19360 hypothetical protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] C 04131 Membrane trafficking [BR:jes04131] D JHS3_13950 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JHS3_07680 UPF0016 family membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D JHS3_03860 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JHS3_21270 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D JHS3_13360 pyk_1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_24360 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_30390 pyk_2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_16780 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:jes03051] D JHS3_16780 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:jes03032] D JHS3_19050 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JHS3_25280 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D JHS3_14480 hupB; transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D JHS3_02970 hypothetical protein K04764 ihfA; integration host factor subunit alpha D JHS3_10760 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JHS3_25320 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JHS3_10230 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D JHS3_17680 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D JHS3_19230 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHS3_12020 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHS3_25310 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHS3_21190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHS3_22590 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHS3_16160 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHS3_19040 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_19510 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_03960 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHS3_09250 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D JHS3_24760 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHS3_11000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JHS3_29370 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D JHS3_06650 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D JHS3_25300 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D JHS3_25430 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JHS3_25380 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JHS3_21420 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:jes03036] D JHS3_25280 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D JHS3_07460 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D JHS3_21660 spb; trans-acting regulatory protein hvrA K03746 hns; DNA-binding protein H-NS D JHS3_14480 hupB; transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D JHS3_02970 hypothetical protein K04764 ihfA; integration host factor subunit alpha D JHS3_10760 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JHS3_25320 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JHS3_31090 Fis family DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D JHS3_13860 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D JHS3_05080 iciA; transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D JHS3_14340 transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D JHS3_24800 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D JHS3_22770 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D JHS3_11020 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein D JHS3_09460 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D JHS3_09470 hypothetical protein K06024 scpB; segregation and condensation protein B D JHS3_26240 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D JHS3_09670 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D JHS3_26530 ftsE; ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D JHS3_26140 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JHS3_01830 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D JHS3_05190 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D JHS3_26130 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D JHS3_26230 hypothetical protein K03589 ftsQ; cell division protein FtsQ D JHS3_26190 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_26540 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D JHS3_26250 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JHS3_25650 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA D JHS3_00320 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D JHS3_14970 cell division protein ZapE K06916 zapE; cell division protein ZapE D JHS3_18380 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHS3_18770 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JHS3_07870 nolF; nolF secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09540 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09560 acrA_1; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_30370 acrA_2; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_11380 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D JHS3_11390 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D JHS3_11400 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D JHS3_30960 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JHS3_30970 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D JHS3_30980 rod shape-determining protein K03571 mreD; rod shape-determining protein MreD D JHS3_31000 mrdB; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_08980 cobyric acid synthase K03496 parA; chromosome partitioning protein D JHS3_16760 hypothetical protein K03496 parA; chromosome partitioning protein D JHS3_25040 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D JHS3_28620 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D JHS3_15330 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHS3_25030 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHS3_25430 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JHS3_25380 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JHS3_25060 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D JHS3_25050 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D JHS3_21020 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D JHS3_00450 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D JHS3_11040 iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D JHS3_28690 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:jes03400] D JHS3_00440 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D JHS3_03620 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D JHS3_09320 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D JHS3_01480 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D JHS3_19810 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JHS3_13070 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D JHS3_18200 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D JHS3_12430 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D JHS3_24030 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D JHS3_04630 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D JHS3_06130 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D JHS3_07570 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D JHS3_02310 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D JHS3_28540 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D JHS3_18280 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D JHS3_25160 exoA; exodeoxyribonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D JHS3_08720 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JHS3_11000 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JHS3_24760 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JHS3_19260 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D JHS3_01720 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D JHS3_10880 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D JHS3_21650 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JHS3_31840 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JHS3_31850 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JHS3_00270 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JHS3_20560 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JHS3_10260 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D JHS3_10630 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D JHS3_00780 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D JHS3_19940 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D JHS3_00600 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D JHS3_04320 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D JHS3_12020 dnaE; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JHS3_25310 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JHS3_21190 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JHS3_22590 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JHS3_16160 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JHS3_19040 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_19510 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JHS3_03960 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JHS3_19230 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHS3_25290 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D JHS3_05800 recA; protein RecA K03553 recA; recombination protein RecA D JHS3_26680 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D JHS3_26660 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D JHS3_26690 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D JHS3_14570 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D JHS3_11800 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D JHS3_05650 sbcC; nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50 D JHS3_05660 sbcD; nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D JHS3_14810 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D JHS3_18630 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JHS3_07480 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D JHS3_03940 recR; recombination protein RecR K06187 recR; recombination protein RecR D JHS3_10340 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D JHS3_12270 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D JHS3_15420 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D JHS3_06650 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D JHS3_25300 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D JHS3_21420 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D JHS3_14480 hupB; transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D JHS3_31090 Fis family DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D JHS3_02970 hypothetical protein K04764 ihfA; integration host factor subunit alpha D JHS3_10760 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JHS3_01060 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JHS3_21660 spb; trans-acting regulatory protein hvrA K03746 hns; DNA-binding protein H-NS D JHS3_22550 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D JHS3_10000 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D JHS3_17980 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D JHS3_05790 recX; regulatory protein RecX K03565 recX; regulatory protein D JHS3_19750 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D JHS3_03160 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D JHS3_05520 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JHS3_05550 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:jes03029] D JHS3_29450 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JHS3_08620 hypothetical protein K02519 infB; translation initiation factor IF-2 D JHS3_02920 hypothetical protein K02520 infC; translation initiation factor IF-3 D JHS3_09120 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D JHS3_31770 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHS3_04360 elongation factor G K02355 fusA; elongation factor G D JHS3_31880 fusA2; elongation factor G 2 K02355 fusA; elongation factor G D JHS3_23270 hypothetical protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D JHS3_07470 era; GTPase Era K03595 era; GTPase D JHS3_28750 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JHS3_22570 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JHS3_02390 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JHS3_01070 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JHS3_30930 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JHS3_30920 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D JHS3_30950 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D JHS3_19230 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JHS3_09190 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D JHS3_19580 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D JHS3_19600 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D JHS3_20920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHS3_20930 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D JHS3_19570 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D JHS3_01260 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D JHS3_01230 hscB; co-chaperone protein HscB K04082 hscB; molecular chaperone HscB D JHS3_22930 glutaredoxin K07390 grxD; monothiol glutaredoxin D JHS3_11040 iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D JHS3_24300 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D JHS3_24230 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D JHS3_24290 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D JHS3_25340 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHS3_15160 photosynthetic protein synthase I K07152 SCO1; protein SCO1 D JHS3_16780 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:jes02000] D JHS3_26290 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D JHS3_10520 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D JHS3_27810 putative ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D JHS3_19680 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D JHS3_03030 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JHS3_02220 macB; macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D JHS3_14590 ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D JHS3_11440 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D JHS3_23580 cysP_1; sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D JHS3_23730 cysP_2; sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D JHS3_23570 sulfate ABC transporter permease K02046 cysU; sulfate/thiosulfate transport system permease protein D JHS3_23560 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D JHS3_23550 cysA2; sulfate/thiosulfate import ATP-binding protein CysA 2 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D JHS3_15100 modB_1; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D JHS3_15120 modB_2; molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D JHS3_15130 modC; GTPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D JHS3_03460 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D JHS3_03440 tauC; taurine ABC transporter permease K15552 tauC; taurine transport system permease protein D JHS3_03450 tauB; taurine import ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D JHS3_03570 ssuA; nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_15870 astR; aryl sulfate ester ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_23670 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_23680 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D JHS3_03590 ssuC_1; ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JHS3_15850 hypothetical protein K15554 ssuC; sulfonate transport system permease protein D JHS3_15860 hypothetical protein K15554 ssuC; sulfonate transport system permease protein D JHS3_23650 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D JHS3_15840 ssuB; sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JHS3_23640 ssuB1; aliphatic sulfonates import ATP-binding protein SsuB 1 K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D JHS3_06390 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHS3_06820 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JHS3_12260 putative binding protein component of ABC iron transporter K02012 afuA; iron(III) transport system substrate-binding protein D JHS3_06420 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHS3_06810 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHS3_12250 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JHS3_06410 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHS3_06800 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHS3_12240 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JHS3_29960 potD_1; polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D JHS3_29970 potD_2; polyamine transporter PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D JHS3_29950 potC; polyamine transporter PotC K11070 potC; spermidine/putrescine transport system permease protein D JHS3_29940 potB; polyamine transporter PotB K11071 potB; spermidine/putrescine transport system permease protein D JHS3_29930 potA2; spermidine/putrescine import ATP-binding protein PotA 2 K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D JHS3_19720 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D JHS3_19710 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHS3_19730 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D JHS3_19700 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D JHS3_20200 myristoyl transferase K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D JHS3_03760 sulfonate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D JHS3_20190 sulfonate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D JHS3_03750 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D JHS3_20180 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D JHS3_18070 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHS3_30620 sugar ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHS3_03930 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D JHS3_30650 sugar ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D JHS3_30640 ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D JHS3_30630 sugar ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D JHS3_03900 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D JHS3_30660 sugar ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D JHS3_03910 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D JHS3_03920 maltose ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D JHS3_18100 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D JHS3_18110 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein D JHS3_18090 lactose ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein D JHS3_05050 ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D JHS3_18080 ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein D JHS3_01400 sugar-binding exported protein K10439 rbsB; ribose transport system substrate-binding protein D JHS3_17930 rbsB; D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D JHS3_01420 hypothetical protein K10440 rbsC; ribose transport system permease protein D JHS3_17920 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D JHS3_01410 rbsA_1; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D JHS3_17910 rbsA_2; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D JHS3_01880 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D JHS3_09090 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D JHS3_29230 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D JHS3_01900 glycoprotein endopeptidase metalloprotease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D JHS3_09070 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D JHS3_29240 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D JHS3_01890 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D JHS3_09080 hypothetical protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D JHS3_29250 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D JHS3_01870 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D JHS3_29220 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein D JHS3_29210 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D JHS3_02720 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D JHS3_02710 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D JHS3_02700 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D JHS3_02690 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JHS3_18520 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D JHS3_21360 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D JHS3_21380 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D JHS3_21370 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D JHS3_21390 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D JHS3_27130 cysteine ABC transporter K02424 tcyA; L-cystine transport system substrate-binding protein D JHS3_27120 cysteine ABC transporter K10009 tcyB; L-cystine transport system permease protein D JHS3_04500 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHS3_12460 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D JHS3_04490 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHS3_12480 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D JHS3_04480 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D JHS3_12490 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D JHS3_04470 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHS3_12500 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D JHS3_04460 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHS3_12510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D JHS3_16070 TonB-dependent receptor K02073 metQ; D-methionine transport system substrate-binding protein D JHS3_16060 D-methionine ABC transporter K02072 metI; D-methionine transport system permease protein D JHS3_16050 metN1; methionine import ATP-binding protein MetN 1 K02071 metN; D-methionine transport system ATP-binding protein D JHS3_03200 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JHS3_07030 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JHS3_11240 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D JHS3_03190 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D JHS3_07040 amino acid permease K02029 ABC.PA.P; polar amino acid transport system permease protein D JHS3_07050 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D JHS3_21350 polar amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D JHS3_06160 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D JHS3_06190 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D JHS3_06200 ABC transporter permease K13895 yejE; microcin C transport system permease protein D JHS3_06230 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D JHS3_07220 bhuT; hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein D JHS3_07210 bhuU; ABC transporter permease K25133 hmuU; heme transport system permease protein D JHS3_07200 bhuV; hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D JHS3_05260 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D JHS3_25630 btuF; vitamin B12-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D JHS3_05270 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D JHS3_05280 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D JHS3_15210 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D JHS3_15220 zinc ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D JHS3_15230 transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D JHS3_21170 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D JHS3_21160 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D JHS3_29550 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D JHS3_11500 lipoprotein releasing system protein K09808 lolC_E_F; lipoprotein-releasing system permease protein D JHS3_11510 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D JHS3_26540 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D JHS3_26530 ftsE; ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D JHS3_04720 ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein D JHS3_04700 ABC transporter K25156 evrA; viologen exporter family transport system ATP-binding protein D JHS3_29170 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D JHS3_29190 ABC transporter ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JHS3_00980 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D JHS3_00970 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JHS3_27540 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D JHS3_29640 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D JHS3_13050 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D JHS3_17200 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D JHS3_05160 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D JHS3_10830 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D JHS3_08850 nasA; nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D JHS3_28790 narK2; nitrite extrusion protein 2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D JHS3_03350 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D JHS3_25170 ampG; AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D JHS3_05750 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D JHS3_09720 cmr; multidrug transporter MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D JHS3_08370 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D JHS3_11850 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D JHS3_27260 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D JHS3_06270 mdtD; putative multidrug resistance protein MdtD K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D JHS3_07110 fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D JHS3_23040 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D JHS3_23030 ptsH_1; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D JHS3_25670 phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D JHS3_25680 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D JHS3_07900 nagE; PTS N-acetylglucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D JHS3_23020 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D JHS3_18420 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D JHS3_18450 agaV; N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D JHS3_18440 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D JHS3_18430 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D JHS3_13380 agaB; PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D JHS3_13390 agaC; N-acetylgalactosamine permease IIC component 1 K10985 agaC; galactosamine PTS system EIIC component D JHS3_13400 hypothetical protein K10986 agaD; galactosamine PTS system EIID component D JHS3_16560 PTS fructose transporter subunit IIA K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D JHS3_16550 PTS sugar transporter K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D JHS3_16540 PTS sorbose transporter subunit IIC K17466 dgaC; D-glucosaminate PTS system EIIC component D JHS3_16530 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D JHS3_10430 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D JHS3_10440 ulaA; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D JHS3_29580 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D JHS3_27040 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z D JHS3_18260 ion transporter K10716 kch; voltage-gated potassium channel D JHS3_16460 ammonium transporter K03320 amt; ammonium transporter, Amt family D JHS3_26070 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D JHS3_23430 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHS3_30410 gst15; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHS3_31070 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JHS3_29430 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D JHS3_02470 BAX inhibitor protein K19416 yccA; modulator of FtsH protease D JHS3_18940 yrhG; putative transporter YrhG K21993 fdhC; formate transporter D JHS3_06750 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D JHS3_00460 hypothetical protein K03442 mscS; small conductance mechanosensitive channel D JHS3_26930 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D JHS3_22950 mechanosensitive ion channel protein MscS K16052 ynaI; MscS family membrane protein D JHS3_22960 mgtE; magnesium transporter MgtE K06213 mgtE; magnesium transporter D JHS3_01850 motA-1; flagellar motor protein K02556 motA; chemotaxis protein MotA D JHS3_09260 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D JHS3_03260 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D JHS3_09270 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D JHS3_00610 translocation protein TolQ K03561 exbB; biopolymer transport protein ExbB D JHS3_03540 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D JHS3_23410 biopolymer transporter K03561 exbB; biopolymer transport protein ExbB D JHS3_00620 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D JHS3_03550 exbD; biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D JHS3_23400 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D JHS3_26640 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D JHS3_26630 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D JHS3_22970 corA_1; magnesium transport protein CorA K03284 corA; magnesium transporter D JHS3_31700 corA_2; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D JHS3_09060 crcB; putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter D JHS3_30700 mercuric transporter K08363 merT; mercuric ion transport protein D JHS3_30710 merP; periplasmic mercury ion-binding protein K08364 merP; periplasmic mercuric ion binding protein D JHS3_00370 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHS3_03330 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHS3_05210 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHS3_23220 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHS3_06640 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D JHS3_12370 putative outer membrane protein K06076 fadL; long-chain fatty acid transport protein D JHS3_05860 hypothetical protein K07347 fimD; outer membrane usher protein D JHS3_02350 iron transport outer membrane receptor K16090 fiu; catecholate siderophore receptor D JHS3_23840 outer membrane protein K16092 btuB; vitamin B12 transporter D JHS3_05240 bfrA; ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D JHS3_07240 bhuR; outer membrane heme receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D JHS3_03050 peptidase K12538 hasF; outer membrane protein, type I secretion system D JHS3_00850 heavy metal RND transporter K07796 cusC; outer membrane protein, copper/silver efflux system D JHS3_21670 outer membrane protein K12340 tolC; outer membrane protein D JHS3_02200 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_02230 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_09520 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_09580 cusC; adeC/adeK/oprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_27280 yjcP; multidrug resistance transporter K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_30350 adeC/adeK/oprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_06480 multidrug resistance transporter K15550 mdtP; outer membrane protein, multidrug efflux system D JHS3_04030 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D JHS3_22740 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D JHS3_09190 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D JHS3_13880 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D JHS3_07840 lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D JHS3_02100 comL; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D JHS3_16250 omlA; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D JHS3_29540 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D JHS3_29530 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D JHS3_21970 corC; cation transporter K06189 corC; hemolysin (HlyC) family protein D JHS3_23300 LrgA family protein K06518 cidA; holin-like protein D JHS3_11830 lysP; lysine-specific permease K11733 lysP; lysine-specific permease D JHS3_27820 aroP; aromatic amino acid transporter AroP K11734 aroP; aromatic amino acid transport protein AroP D JHS3_31510 amino acid permease K16263 yjeH; amino acid efflux transporter D JHS3_25990 zitB; zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein D JHS3_00830 cation transporter K07787 cusA; copper/silver efflux system protein D JHS3_21680 resistance-nodulation-cell division (RND) efflux transporter K18303 mexK; multidrug efflux pump D JHS3_07860 nolG; nodulation protein NolG K18138 acrB; multidrug efflux pump D JHS3_09530 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_09570 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_30360 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_02180 resistance-nodulation-cell division (RND) efflux transporter K07788 mdtB; multidrug efflux pump D JHS3_02190 mdtC; multidrug resistance protein MdtC K07789 mdtC; multidrug efflux pump D JHS3_18220 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D JHS3_11640 transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D JHS3_12790 putative multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D JHS3_28260 O-acetylserine/cysteine exporter K15268 eamA; O-acetylserine/cysteine efflux transporter D JHS3_12910 membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD D JHS3_13130 rarD; chloramphenicol-sensitive protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD D JHS3_22910 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D JHS3_07580 UPF0060 membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein D JHS3_08460 gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D JHS3_06170 transporter K07084 yuiF; putative amino acid transporter D JHS3_25960 gntP; gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D JHS3_11080 dcuB; C4-dicarboxylate ABC transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D JHS3_30450 BCCT family transporter K05020 opuD; glycine betaine transporter D JHS3_06740 ionic antiporter K07300 chaA; Ca2+:H+ antiporter D JHS3_07060 pitA; phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D JHS3_01770 actP; cation acetate symporter K14393 actP; cation/acetate symporter D JHS3_14360 gltC; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D JHS3_06220 nhaP2; K(+)/H(+) antiporter NhaP2 K11105 cvrA; potassium/hydrogen antiporter D JHS3_14290 kefB; potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D JHS3_29500 sodium/hydrogen exchanger family protein K03455 KEA1_2_3; K+:H+ antiporter D JHS3_07650 hypothetical protein K26735 KEA4_5_6; K+:H+ antiporter D JHS3_31330 hypothetical protein K26731 CHX; K+:H+ antiporter D JHS3_21540 Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D JHS3_21530 trkA; Trk system potassium transport protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D JHS3_14630 uraA; uracil permease K02824 uraA; uracil permease D JHS3_07690 adenine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D JHS3_10510 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D JHS3_18500 b2796; serine transporter K03837 sdaC; serine transporter D JHS3_23460 membrane protein K26604 cyuP; cysteine uptake transport protein D JHS3_27180 benE; benzoate transporter K05782 benE; benzoate membrane transport protein D JHS3_15080 voltage-gated ClC-type chloride channel ClcB K03281 clcA; chloride channel protein, CIC family D JHS3_16000 chloride channel protein K03281 clcA; chloride channel protein, CIC family D JHS3_19640 putative ion-transport protein K03281 clcA; chloride channel protein, CIC family D JHS3_26570 chloride channel protein K03281 clcA; chloride channel protein, CIC family D JHS3_01130 chromate transporter K07240 chrA; chromate transporter D JHS3_19910 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D JHS3_23350 Na/Pi cotransporter K03324 yjbB; phosphate:Na+ symporter D JHS3_14160 arsenical-resistance protein K03325 ACR3; arsenite transporter D JHS3_17580 mviN; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D JHS3_21740 kup; putative potassium transport system protein kup K03549 kup; KUP system potassium uptake protein D JHS3_02330 argO; amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D JHS3_05070 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D JHS3_20750 amino acid transporter K05834 rhtB; homoserine/homoserine lactone efflux protein D JHS3_14700 leucine efflux protein K11250 leuE; leucine efflux protein D JHS3_20220 hypothetical protein K26605 azlC; branched chain amino acid efflux pump D JHS3_20210 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D JHS3_06490 multidrug transporter subunit MdtO K15547 mdtO; multidrug resistance protein MdtO D JHS3_05200 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D JHS3_00700 marC_1; UPF0056 membrane protein K05595 marC; multiple antibiotic resistance protein D JHS3_16680 marC_2; UPF0056 membrane protein K05595 marC; multiple antibiotic resistance protein D JHS3_23050 marC_3; UPF0056 inner membrane protein K05595 marC; multiple antibiotic resistance protein D JHS3_12900 hypothetical protein K07034 GPR1; acetate uptake transporter family protein D JHS3_26190 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D JHS3_07680 UPF0016 family membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D JHS3_27430 membrane protein K07243 FTR; high-affinity iron transporter D JHS3_27410 membrane protein K07230 p19; periplasmic iron binding protein D JHS3_01350 carbon starvation protein K06200 cstA; carbon starvation protein D JHS3_11630 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein D JHS3_09400 sugar transporter SemiSWEET K15383 K15383; MtN3 and saliva related transmembrane protein D JHS3_02340 hypothetical protein K03832 tonB; periplasmic protein TonB D JHS3_05090 hypothetical protein K03832 tonB; periplasmic protein TonB D JHS3_26600 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D JHS3_26610 tolB; protein TolB K03641 tolB; TolB protein D JHS3_17400 narG_1; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28810 narG_2; respiratory nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D JHS3_17390 narH_1; respiratory nitrate reductase subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28820 narH_2; respiratory nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D JHS3_17370 narI_1; respiratory nitrate reductase subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D JHS3_28840 narI_2; nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D JHS3_27270 emrA_2; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system D JHS3_06500 mdtN; multidrug resistance protein MdtN K15549 mdtN; membrane fusion protein, multidrug efflux system D JHS3_03040 hasE; metalloprotease secretion protein K12537 hasE; membrane fusion protein, type I secretion system D JHS3_00840 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system D JHS3_21690 resistance-nodulation-cell division (RND) efflux membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system D JHS3_07870 nolF; nolF secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09540 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09560 acrA_1; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_30370 acrA_2; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_02170 multidrug transporter K07799 mdtA; membrane fusion protein, multidrug efflux system D JHS3_02210 drug-efflux protein K13888 macA; membrane fusion protein, macrolide-specific efflux system D JHS3_04040 hypothetical protein K25590 epsF; protein tyrosine kinase modulator D JHS3_00910 hypothetical protein K28369 dolP; outer membrane lipoprotein DolP D JHS3_31350 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D JHS3_16080 paraquat-inducible protein K03808 pqiA; intermembrane transport protein PqiA/LetA D JHS3_16090 paraquat-inducible protein K03808 pqiA; intermembrane transport protein PqiA/LetA D JHS3_16100 lpw206-207; paraquat-inducible protein K06192 pqiB; intermembrane transport protein PqiB/LetB D JHS3_05340 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D JHS3_27470 transport ATPase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:jes02044] D JHS3_21670 outer membrane protein K12340 tolC; outer membrane protein D JHS3_03030 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JHS3_03040 hasE; metalloprotease secretion protein K12537 hasE; membrane fusion protein, type I secretion system D JHS3_03050 peptidase K12538 hasF; outer membrane protein, type I secretion system D JHS3_06540 hypothetical protein K02452 gspC; general secretion pathway protein C D JHS3_06550 xcpQ; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D JHS3_17840 hypothetical protein K02453 gspD; general secretion pathway protein D D JHS3_06560 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D JHS3_17790 pulE; type II secretion system ATPase PulE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D JHS3_13670 gspF_1; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D JHS3_17780 gspF_2; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D JHS3_13660 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D JHS3_17770 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D JHS3_17850 pulG; type II secretion system pseudopilin PulG K02456 gspG; general secretion pathway protein G D JHS3_17860 oxpG; type II secretion system pseudopilin OxpG K02456 gspG; general secretion pathway protein G D JHS3_13650 hypothetical protein K02457 gspH; general secretion pathway protein H D JHS3_13640 hypothetical protein K02458 gspI; general secretion pathway protein I D JHS3_13630 xcpW; type II secretion system protein J K02459 gspJ; general secretion pathway protein J D JHS3_13620 xcpX; type II secretion system protein K K02460 gspK; general secretion pathway protein K D JHS3_14530 hypothetical protein K02461 gspL; general secretion pathway protein L D JHS3_14540 epsM; type II secretion system protein M K02462 gspM; general secretion pathway protein M D JHS3_14550 hypothetical protein K02463 gspN; general secretion pathway protein N D JHS3_00340 gspO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D JHS3_24570 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D JHS3_00360 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D JHS3_29290 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D JHS3_00350 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D JHS3_29300 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D JHS3_12660 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE D JHS3_22820 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D JHS3_25540 pilus biosynthesis protein K02655 pilE; type IV pilus assembly protein PilE D JHS3_13930 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D JHS3_28700 pilG; response regulator K02657 pilG; twitching motility two-component system response regulator PilG D JHS3_28710 pilH; protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D JHS3_28720 hypothetical protein K02659 pilI; twitching motility protein PilI D JHS3_28730 pilJ; protein PilJ K02660 pilJ; twitching motility protein PilJ D JHS3_22300 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D JHS3_22290 pilN; fimbrial protein K02663 pilN; type IV pilus assembly protein PilN D JHS3_22280 pilO; type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D JHS3_22270 pilP; fimbrial protein K02665 pilP; type IV pilus assembly protein PilP D JHS3_22260 fimbrial protein K02666 pilQ; type IV pilus assembly protein PilQ D JHS3_19290 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT D JHS3_08580 uptC; twitching motility protein PilT K02670 pilU; twitching motility protein PilU D JHS3_19280 twitching motility protein PilT K02670 pilU; twitching motility protein PilU D JHS3_25560 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D JHS3_25570 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D JHS3_25580 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D JHS3_25590 pilY1; type IV pilus biogenesis factor PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D JHS3_16150 pilZ; type 4 fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D JHS3_12670 general secretion pathway protein GspH K08084 fimT; type IV fimbrial biogenesis protein FimT D JHS3_25550 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D JHS3_11760 hypothetical protein K08086 fimV; pilus assembly protein FimV D JHS3_19270 hypothetical protein K08086 fimV; pilus assembly protein FimV D JHS3_28470 membrane fimbriae assembly protein K02279 cpaB; pilus assembly protein CpaB D JHS3_28460 exported fimbriae assembly protein K02280 cpaC; pilus assembly protein CpaC D JHS3_28450 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D JHS3_28440 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D JHS3_28430 hypothetical protein K12510 tadB; tight adherence protein B D JHS3_28420 hypothetical protein K12511 tadC; tight adherence protein C D JHS3_28410 hypothetical protein K27079 tadD; tight adherence protein D D JHS3_28480 hypothetical protein K12513 tadE; tight adherence protein E D JHS3_28390 hypothetical protein K27080 tadG; tight adherence protein G D JHS3_28490 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D JHS3_29270 type II and III secretion system protein K12282 mshL; MSHA biogenesis protein MshL D JHS3_29260 general secretion pathway protein GspA K12283 mshM; MSHA biogenesis protein MshM D JHS3_19320 YggT family protein K02221 yggT; YggT family protein D JHS3_02500 hypothetical protein K02237 comEA; competence protein ComEA D JHS3_16730 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D JHS3_01950 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JHS3_01960 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JHS3_10900 hypothetical protein K04061 flhB2; flagellar biosynthesis protein D JHS3_15570 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D JHS3_15550 hypothetical protein K02411 fliH; flagellar assembly protein FliH D JHS3_15540 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JHS3_02000 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D JHS3_02010 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D JHS3_02020 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JHS3_02030 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JHS3_02040 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JHS3_16710 protein disulfide-isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D JHS3_15510 hypothetical protein K11892 impK; type VI secretion system protein ImpK D JHS3_15500 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D JHS3_15520 hypothetical protein K11897 impF; type VI secretion system protein ImpF D JHS3_05850 hypothetical protein K07346 fimC; fimbrial chaperone protein D JHS3_05860 hypothetical protein K07347 fimD; outer membrane usher protein D JHS3_05830 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D JHS3_05840 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D JHS3_05870 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D JHS3_24340 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JHS3_20100 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D JHS3_04940 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JHS3_31780 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JHS3_04950 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D JHS3_02740 hypothetical protein K03075 secG; preprotein translocase subunit SecG D JHS3_00220 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JHS3_00390 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JHS3_26510 hypothetical protein K03110 ftsY; fused signal recognition particle receptor D JHS3_04930 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JHS3_25340 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JHS3_05500 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA D JHS3_28940 tatE; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D JHS3_28950 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D JHS3_28960 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:jes02042] D JHS3_00370 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHS3_03330 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHS3_05210 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHS3_23220 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D JHS3_27010 hlY-III; hemolysin III K11068 hlyIII; hemolysin III D JHS3_22860 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 02022 Two-component system [BR:jes02022] D JHS3_30070 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JHS3_30060 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D JHS3_24450 two-component sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D JHS3_24440 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D JHS3_26000 qseC; sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D JHS3_26010 pmrA; DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D JHS3_04760 kdpD; two-component sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D JHS3_04770 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D JHS3_06840 tctE; sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D JHS3_06830 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD D JHS3_15040 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D JHS3_02150 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D JHS3_06960 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D JHS3_15050 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D JHS3_30670 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D JHS3_29020 nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D JHS3_29010 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D JHS3_26840 algZ; alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D JHS3_26830 algR; DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D JHS3_01370 sensor histidine kinase K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D JHS3_01360 DNA-binding response regulator K27883 btsR; two-component system, LytTR family, low-concentration pyruvate response regulator D JHS3_30100 ntrB; signal transduction histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JHS3_30090 ntrC; sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D JHS3_21510 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JHS3_21520 ntrX; Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D JHS3_21770 pilS; sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D JHS3_21760 pilR; type 4 fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D JHS3_16830 two-component sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D JHS3_16810 transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR D JHS3_20170 dctB; two-component sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D JHS3_20160 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D JHS3_15680 cheA; chemotaxis protein A K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JHS3_15660 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JHS3_15600 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D JHS3_15640 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JHS3_15650 cheV; chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JHS3_28740 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D JHS3_28700 pilG; response regulator K02657 pilG; twitching motility two-component system response regulator PilG D JHS3_28710 pilH; protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D JHS3_29720 dctR_2; DNA-binding response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR D JHS3_15630 fleS; PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D JHS3_15590 fleR; sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D JHS3_15610 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D JHS3_08840 nitrate ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor D JHS3_08830 nasT; histidine kinase K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:jes02035] D JHS3_15680 cheA; chemotaxis protein A K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JHS3_14390 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D JHS3_15600 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D JHS3_15660 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JHS3_15670 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D JHS3_15640 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JHS3_15650 cheV; chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JHS3_00520 mcp40H-5; chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_01730 mcp40H-19_1; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_02320 mcp40H-19_2; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_06030 mcp40H-19_3; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_08080 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_10500 mcp40H-19_4; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_13350 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_16650 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_18270 chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D JHS3_27740 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_30490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JHS3_06240 aer-1; aerotaxis receptor K03776 aer; aerotaxis receptor D JHS3_15550 hypothetical protein K02411 fliH; flagellar assembly protein FliH D JHS3_15540 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JHS3_15530 fliJ; flagellar FliJ protein K02413 fliJ; flagellar protein FliJ D JHS3_02010 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D JHS3_02020 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JHS3_02030 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JHS3_02040 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JHS3_01950 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JHS3_01960 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JHS3_15560 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D JHS3_01990 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D JHS3_02000 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN D JHS3_15570 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D JHS3_14850 flgI; flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D JHS3_10140 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D JHS3_14860 hypothetical protein K02393 flgH; flagellar L-ring protein FlgH D JHS3_01980 hypothetical protein K02415 fliL; flagellar protein FliL D JHS3_15580 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D JHS3_01970 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D JHS3_14920 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D JHS3_14910 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D JHS3_14900 basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D JHS3_14880 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D JHS3_14870 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D JHS3_14840 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D JHS3_14890 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D JHS3_14830 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D JHS3_14820 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D JHS3_08500 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D JHS3_10970 fliC; flagellin K02406 fliC; flagellin D JHS3_10950 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2 D JHS3_10940 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D JHS3_01860 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D JHS3_01850 motA-1; flagellar motor protein K02556 motA; chemotaxis protein MotA D JHS3_09260 motA; flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D JHS3_03260 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D JHS3_09270 motB; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D JHS3_15630 fleS; PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D JHS3_15590 fleR; sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D JHS3_27130 cysteine ABC transporter K02424 tcyA; L-cystine transport system substrate-binding protein D JHS3_08510 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D JHS3_10960 hypothetical protein K06603 flaG; flagellar protein FlaG D JHS3_01930 flhF; flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF D JHS3_01920 site-determining protein K04562 flhG; flagellar biosynthesis protein FlhG D JHS3_28700 pilG; response regulator K02657 pilG; twitching motility two-component system response regulator PilG D JHS3_28710 pilH; protein PilH K02658 pilH; twitching motility two-component system response regulator PilH D JHS3_28720 hypothetical protein K02659 pilI; twitching motility protein PilI D JHS3_28730 pilJ; protein PilJ K02660 pilJ; twitching motility protein PilJ D JHS3_28740 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D JHS3_21760 pilR; type 4 fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D JHS3_21770 pilS; sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D JHS3_19290 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT D JHS3_08580 uptC; twitching motility protein PilT K02670 pilU; twitching motility protein PilU D JHS3_19280 twitching motility protein PilT K02670 pilU; twitching motility protein PilU D JHS3_24570 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D JHS3_00360 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D JHS3_29290 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D JHS3_00350 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D JHS3_29300 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D JHS3_00340 gspO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D JHS3_13930 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D JHS3_22260 fimbrial protein K02666 pilQ; type IV pilus assembly protein PilQ D JHS3_22270 pilP; fimbrial protein K02665 pilP; type IV pilus assembly protein PilP D JHS3_22280 pilO; type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D JHS3_22290 pilN; fimbrial protein K02663 pilN; type IV pilus assembly protein PilN D JHS3_22300 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D JHS3_16150 pilZ; type 4 fimbrial biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D JHS3_25560 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D JHS3_25570 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D JHS3_25580 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D JHS3_25590 pilY1; type IV pilus biogenesis factor PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D JHS3_12660 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE D JHS3_22820 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D JHS3_25540 pilus biosynthesis protein K02655 pilE; type IV pilus assembly protein PilE D JHS3_28490 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D JHS3_28470 membrane fimbriae assembly protein K02279 cpaB; pilus assembly protein CpaB D JHS3_28460 exported fimbriae assembly protein K02280 cpaC; pilus assembly protein CpaC D JHS3_28450 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D JHS3_28440 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D JHS3_05850 hypothetical protein K07346 fimC; fimbrial chaperone protein D JHS3_05860 hypothetical protein K07347 fimD; outer membrane usher protein D JHS3_05830 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D JHS3_05840 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D JHS3_05870 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:jes04812] D JHS3_30960 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JHS3_26250 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JHS3_26240 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D JHS3_11380 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D JHS3_11390 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D JHS3_11400 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D JHS3_08980 cobyric acid synthase K03496 parA; chromosome partitioning protein D JHS3_16760 hypothetical protein K03496 parA; chromosome partitioning protein D JHS3_25040 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D JHS3_28620 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D JHS3_15330 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JHS3_25030 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:jes04147] D JHS3_16780 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D JHS3_09660 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JHS3_03860 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JHS3_05880 pgk_1; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHS3_30830 pgk_2; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JHS3_13360 pyk_1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_24360 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_30390 pyk_2; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JHS3_18960 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D JHS3_14980 peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D JHS3_20920 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JHS3_19580 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D JHS3_03800 pgi1; glucose-6-phosphate isomerase 1 K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JHS3_14000 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D JHS3_31770 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JHS3_28930 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D JHS3_27540 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D JHS3_08590 fadD-2; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D JHS3_12200 phbA; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D JHS3_23230 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D JHS3_00660 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D JHS3_07700 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D JHS3_27450 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JHS3_14710 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JHS3_02120 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D JHS3_24160 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_30190 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JHS3_27490 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D JHS3_13300 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D JHS3_31100 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JHS3_13290 peptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D JHS3_03770 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_08010 lpdA1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_26910 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JHS3_20000 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D JHS3_03830 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JHS3_02730 tpiA_1; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_28200 tpiA_2; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JHS3_21270 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:jes02048] D JHS3_15420 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D JHS3_15410 cas2-2; type I-E CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D JHS3_15450 Cse4 family CRISPR-associated protein K19124 casC; CRISPR system Cascade subunit CasC D JHS3_15440 type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD D JHS3_22520 type I restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D JHS3_25280 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D JHS3_05700 hypothetical protein K19334 tabA; biofilm protein TabA D JHS3_26250 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JHS3_30960 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JHS3_25430 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JHS3_25380 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JHS3_17260 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JHS3_07970 hypothetical protein K09159 cptB; antitoxin CptB D JHS3_01260 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:jes04052] D JHS3_27230 pbeF; nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:jes01504] D JHS3_08310 hypothetical protein K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D JHS3_09720 cmr; multidrug transporter MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D JHS3_25460 hypothetical protein K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-] D JHS3_25440 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D JHS3_23900 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D JHS3_07870 nolF; nolF secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09540 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_09560 acrA_1; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_30370 acrA_2; MexX family efflux pump subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JHS3_07860 nolG; nodulation protein NolG K18138 acrB; multidrug efflux pump D JHS3_09530 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_09570 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_30360 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JHS3_02200 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_02230 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_09520 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_09580 cusC; adeC/adeK/oprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_27280 yjcP; multidrug resistance transporter K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_30350 adeC/adeK/oprM family multidrug efflux complex outer membrane factor K18139 oprM; outer membrane protein, multidrug efflux system D JHS3_21690 resistance-nodulation-cell division (RND) efflux membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system D JHS3_21680 resistance-nodulation-cell division (RND) efflux transporter K18303 mexK; multidrug efflux pump D JHS3_21670 outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:jes03100] D JHS3_t00020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00190 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00270 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00440 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00470 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JHS3_t00040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00220 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JHS3_t00390 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JHS3_t00400 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JHS3_t00130 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JHS3_t00230 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JHS3_t00370 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D JHS3_t00570 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JHS3_t00030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JHS3_t00050 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JHS3_t00110 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JHS3_t00180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHS3_t00350 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHS3_t00360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHS3_t00600 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JHS3_t00430 tRNA-His K14226 tRNA-His; tRNA His D JHS3_t00200 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00280 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00330 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00450 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00480 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JHS3_t00010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00160 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JHS3_t00540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JHS3_t00550 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JHS3_t00340 tRNA-Met K14230 tRNA-Met; tRNA Met D JHS3_t00460 tRNA-Met K14230 tRNA-Met; tRNA Met D JHS3_t00510 tRNA-Met K14230 tRNA-Met; tRNA Met D JHS3_t00580 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D JHS3_t00080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHS3_t00410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHS3_t00490 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D JHS3_t00090 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHS3_t00120 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHS3_t00170 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHS3_t00310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JHS3_t00260 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHS3_t00530 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHS3_t00560 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHS3_t00610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JHS3_t00620 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D JHS3_t00590 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JHS3_t00070 tRNA-Val K14237 tRNA-Val; tRNA Val D JHS3_t00140 tRNA-Val K14237 tRNA-Val; tRNA Val D JHS3_t00240 tRNA-Val K14237 tRNA-Val; tRNA Val D JHS3_r00030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00090 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00120 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00150 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D JHS3_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00140 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D JHS3_r00010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00070 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00100 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_r00130 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JHS3_tm00010 transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D JHS3_28040 yueD; benzil reductase ((S)-benzoin forming) K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320] D JHS3_08360 dkgB; 2,5-diketo-D-gluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D JHS3_10790 glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D JHS3_01430 erythritol/L-threitol dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D JHS3_09790 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D JHS3_25910 anaerobic sulfatase maturase K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7] D JHS3_15000 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D JHS3_05970 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D JHS3_20020 fzeA; electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D JHS3_24640 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D JHS3_11260 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D JHS3_09980 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D JHS3_15710 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D JHS3_22850 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D JHS3_26090 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D JHS3_05480 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JHS3_09000 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JHS3_04820 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JHS3_23720 antioxidant protein K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JHS3_24660 deferrochelatase/peroxidase YfeX K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D JHS3_04580 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D JHS3_16400 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D JHS3_18580 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D JHS3_18590 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D JHS3_15900 hypothetical protein K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D JHS3_02360 piuC; PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D JHS3_27190 fhp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D JHS3_15910 monooxygenase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-] D JHS3_03290 exported copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3] D JHS3_03130 hypothetical protein K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D JHS3_19990 fpr; ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D JHS3_13210 norW; nitric oxide reductase FlRd-NAD(+) reductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-] D JHS3_14150 arsC-2; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D JHS3_25700 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D JHS3_11480 pyruvate formate-lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D JHS3_09930 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D JHS3_22670 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D JHS3_11490 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D JHS3_07260 putative heme utilization radical SAM enzyme HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342] D JHS3_19740 acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D JHS3_27100 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D JHS3_21980 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D JHS3_09450 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D JHS3_05130 yjaB; acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D JHS3_01090 hypothetical protein K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D JHS3_25410 acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D JHS3_16230 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D JHS3_16220 ate; putative arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D JHS3_31740 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D JHS3_23010 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D JHS3_11360 putative phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D JHS3_11370 putative phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D JHS3_18860 ppk-2; polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D JHS3_02410 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D JHS3_07070 UPF0061 protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D JHS3_28010 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D JHS3_29590 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D JHS3_05370 hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D JHS3_31520 macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D JHS3_31230 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D JHS3_09410 phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D JHS3_24850 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D JHS3_23420 cyclic diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D JHS3_16620 ydeN; sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-] D JHS3_01020 endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D JHS3_16140 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D JHS3_19460 TatD related DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D JHS3_05220 IroE protein K07017 besA; ferri-bacillibactin esterase [EC:3.1.-.-] D JHS3_25090 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D JHS3_31030 N-acyl-D-amino-acid deacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D JHS3_03710 def_1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D JHS3_21460 def_2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D JHS3_02430 carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D JHS3_23440 RutC family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D JHS3_17540 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D JHS3_07000 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D JHS3_23700 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D JHS3_05620 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D JHS3_21560 mpl; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D JHS3_19840 electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D JHS3_19860 hypothetical protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D JHS3_19870 rnfB; electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D JHS3_10080 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D JHS3_19970 heavy metal resistance membrane ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D JHS3_05350 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D JHS3_11780 fdxA; ferredoxin 1 K05524 fdxA; ferredoxin D JHS3_19830 electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D JHS3_19820 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D JHS3_19880 rnfA; electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D JHS3_01250 iscU; iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D JHS3_13200 norV; anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D JHS3_20010 etfB; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D JHS3_13100 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D JHS3_09510 acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D JHS3_19300 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein D JHS3_23450 UPF0597 protein K26607 cyuA; putative L-cysteine desulfidase C 99986 Glycan metabolism D JHS3_10750 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D JHS3_10740 lapB; lipopolysaccharide assembly protein B K19804 lapB; lipopolysaccharide assembly protein B D JHS3_25080 hypothetical protein K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D JHS3_24840 porphyrin biosynthesis-like protein K02498 hemY; HemY protein D JHS3_11280 aarF; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D JHS3_30020 ubiB; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D JHS3_26050 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D JHS3_29070 mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D JHS3_18610 oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D JHS3_06010 membrane protein K15977 K15977; putative oxidoreductase D JHS3_08910 hypothetical protein K15977 K15977; putative oxidoreductase D JHS3_20960 membrane protein K15977 K15977; putative oxidoreductase D JHS3_07520 carboxylesterase K06999 K06999; phospholipase/carboxylesterase D JHS3_16420 GCN5 family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D JHS3_00490 cold-shock protein K03704 cspA; cold shock protein D JHS3_13090 cold-shock protein K03704 cspA; cold shock protein D JHS3_26060 glnK; nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2 D JHS3_12120 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D JHS3_00480 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D JHS3_14520 tig; trigger factor K03545 tig; trigger factor D JHS3_25830 msrQ; protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D JHS3_12590 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D JHS3_26850 comM; ATP-dependent protease K07391 comM; magnesium chelatase family protein D JHS3_23370 hypothetical protein K07394 K07394; SM-20-related protein D JHS3_18600 hypothetical protein K07397 yhfA; putative redox protein D JHS3_18930 peroxiredoxin K07397 yhfA; putative redox protein D JHS3_28670 cytochrome c biogenesis protein K07399 resB; cytochrome c biogenesis protein D JHS3_30120 hypothetical protein K07401 K07401; selenoprotein W-related protein C 99976 Replication and repair D JHS3_31760 hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D JHS3_12450 UPF0758 protein K03630 radC; DNA repair protein RadC D JHS3_10190 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D JHS3_30470 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D JHS3_00890 UPF0102 protein K07460 yraN; putative endonuclease D JHS3_09760 hypothetical protein K07461 K07461; putative endonuclease D JHS3_21440 smf; DNA processing protein DprA K04096 smf; DNA processing protein D JHS3_06620 recombination factor protein RarA K07478 ycaJ; putative ATPase D JHS3_03400 transposase K07483 K07483; transposase D JHS3_04680 transposase K07483 K07483; transposase D JHS3_08430 transposase K07483 K07483; transposase D JHS3_11130 transposase K07483 K07483; transposase D JHS3_13410 transposase K07483 K07483; transposase D JHS3_13600 transposase K07483 K07483; transposase D JHS3_15270 transposase K07483 K07483; transposase D JHS3_15370 transposase K07483 K07483; transposase D JHS3_15750 transposase K07483 K07483; transposase D JHS3_17640 transposase K07483 K07483; transposase D JHS3_22340 transposase K07483 K07483; transposase D JHS3_13500 IS110 family transposase K07486 K07486; transposase D JHS3_16690 transposase K07491 rayT; REP-associated tyrosine transposase D JHS3_03410 tnp_1; transposase K07497 K07497; putative transposase D JHS3_04670 tnp_2; transposase K07497 K07497; putative transposase D JHS3_08420 tnp_3; transposase K07497 K07497; putative transposase D JHS3_11120 tnp_4; transposase K07497 K07497; putative transposase D JHS3_13420 tnp_5; transposase K07497 K07497; putative transposase D JHS3_13590 tnp_6; transposase K07497 K07497; putative transposase D JHS3_15260 tnp_7; transposase K07497 K07497; putative transposase D JHS3_15360 tnp_8; transposase K07497 K07497; putative transposase D JHS3_15760 tnp_9; transposase K07497 K07497; putative transposase D JHS3_17650 tnp_10; transposase K07497 K07497; putative transposase D JHS3_22350 tnp_11; transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D JHS3_03950 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D JHS3_31620 dtpA; dipeptide and tripeptide permease A K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D JHS3_10890 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D JHS3_18530 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D JHS3_19770 agcS-1; transporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D JHS3_08450 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D JHS3_12570 putative intracellular septation protein A K06190 ispZ; intracellular septation protein D JHS3_27720 SpoOM protein K06377 spo0M; sporulation-control protein D JHS3_11940 SpoVR family protein K06415 spoVR; stage V sporulation protein R D JHS3_19400 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D JHS3_06310 GTP-binding protein K06207 typA; GTP-binding protein D JHS3_15720 membrane protein K07168 K07168; CBS domain-containing membrane protein D JHS3_16020 membrane protein K07168 K07168; CBS domain-containing membrane protein D JHS3_21950 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D JHS3_08990 phosphate starvation protein PhoH K07175 phoH2; PhoH-like ATPase D JHS3_11960 PrkA family serine protein kinase K07180 prkA; serine protein kinase D JHS3_14740 UPF0234 protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D JHS3_06630 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D JHS3_29200 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA D JHS3_23360 pcp; lipoprotein K06077 slyB; outer membrane lipoprotein SlyB D JHS3_09200 outer membrane protein chaperone K06142 hlpA; outer membrane protein D JHS3_09940 peptidase K06194 nlpD; lipoprotein NlpD D JHS3_01490 hypothetical protein K07289 asmA; AsmA protein C 99994 Others D JHS3_31680 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D JHS3_13780 hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin D JHS3_19350 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D JHS3_28520 cutC; copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D JHS3_10530 apaG; protein ApaG K06195 apaG; ApaG protein D JHS3_02540 cyaY; protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D JHS3_07230 bhuS; hemin-degrading factor K07225 hmuS; putative hemin transport protein D JHS3_07270 hypothetical protein K07227 chuX; heme iron utilization protein D JHS3_28780 hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D JHS3_11670 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production D JHS3_27460 ElaA protein K02348 elaA; ElaA protein D JHS3_13720 globin K06886 glbN; hemoglobin D JHS3_03670 hypothetical protein K07001 K07001; NTE family protein D JHS3_11050 plpD; patatin K07001 K07001; NTE family protein D JHS3_18560 patatin K07001 K07001; NTE family protein D JHS3_21730 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D JHS3_18870 erpA; putative iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D JHS3_22230 UPF0761 membrane protein K07058 K07058; membrane protein D JHS3_24910 rbn; hypothetical protein K07058 K07058; membrane protein D JHS3_11230 cysteine desulfurase, sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE D JHS3_09880 UPF0176 protein K07146 K07146; UPF0176 protein D JHS3_09780 phnB; glyoxalase K04750 phnB; PhnB protein D JHS3_20950 VOC family protein K04750 phnB; PhnB protein D JHS3_12970 nfrA; phage receptor K11739 nfrA; bacteriophage N4 adsorption protein A D JHS3_12980 nfrB; bacteriophage N4 adsorption protein B K11740 nfrB; bacteriophage N4 adsorption protein B D JHS3_28060 hypothetical protein K03745 slyX; SlyX protein D JHS3_21430 smg; protein Smg K03747 smg; Smg protein D JHS3_15830 hypothetical protein K03933 cpbD; chitin-binding protein D JHS3_04960 hypothetical protein K03975 dedA; membrane-associated protein D JHS3_12280 hypothetical protein K08983 K08983; putative membrane protein D JHS3_23160 DUF350 domain-containing protein K08989 K08989; putative membrane protein D JHS3_12400 hypothetical protein K09858 K09858; SEC-C motif domain protein D JHS3_28310 hypothetical protein K11312 K11312; cupin 2 domain-containing protein D JHS3_16640 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D JHS3_16630 anaerobic sulfatase maturase K06871 K06871; uncharacterized protein D JHS3_18190 hypothetical protein K06923 K06923; uncharacterized protein D JHS3_21050 CoA-binding protein K06929 K06929; uncharacterized protein D JHS3_01590 hypothetical protein K06938 K06938; uncharacterized protein D JHS3_04640 Fe-S oxidoreductase K06940 K06940; uncharacterized protein D JHS3_05110 hypothetical protein K06940 K06940; uncharacterized protein D JHS3_23480 hypothetical protein K06940 K06940; uncharacterized protein D JHS3_16890 N-acetyltransferase K06975 K06975; uncharacterized protein D JHS3_22020 hypothetical protein K06992 K06992; uncharacterized protein D JHS3_22140 hypothetical protein K06992 K06992; uncharacterized protein D JHS3_08970 hypothetical protein K06995 K06995; uncharacterized protein D JHS3_24650 esterase YqiA K07000 K07000; uncharacterized protein D JHS3_30420 hypothetical protein K07006 K07006; uncharacterized protein D JHS3_06850 alpha/beta hydrolase K07018 K07018; uncharacterized protein D JHS3_04200 hydrolase K07019 K07019; uncharacterized protein D JHS3_09770 hypothetical protein K07032 K07032; uncharacterized protein D JHS3_15920 extradiol dioxygenase K07032 K07032; uncharacterized protein D JHS3_18330 hypothetical protein K07032 K07032; uncharacterized protein D JHS3_10250 hypothetical protein K07039 K07039; uncharacterized protein D JHS3_21930 hypothetical protein K07039 K07039; uncharacterized protein D JHS3_13040 zinc protease K07054 K07054; uncharacterized protein D JHS3_18150 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D JHS3_26940 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D JHS3_26970 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D JHS3_05510 phosphatase K07093 K07093; uncharacterized protein D JHS3_17040 hypothetical protein K07112 K07112; uncharacterized protein D JHS3_17050 hypothetical protein K07112 K07112; uncharacterized protein D JHS3_05760 hypothetical protein K07118 K07118; uncharacterized protein D JHS3_28370 hypothetical protein K07126 K07126; uncharacterized protein D JHS3_27960 hypothetical protein K07137 K07137; uncharacterized protein D JHS3_11890 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D JHS3_16740 molybdenum cofactor sulfurase K07140 K07140; MOSC domain-containing protein D JHS3_17690 aspartyl-tRNA amidotransferase subunit B K09117 K09117; uncharacterized protein D JHS3_09800 hypothetical protein K09122 K09122; uncharacterized protein D JHS3_19330 UPF0235 protein K09131 K09131; uncharacterized protein D JHS3_09050 hypothetical protein K09137 K09137; uncharacterized protein D JHS3_28290 UPF0178 protein K09768 K09768; uncharacterized protein D JHS3_12560 hypothetical protein K09780 K09780; uncharacterized protein D JHS3_27870 membrane protein K09781 K09781; uncharacterized protein D JHS3_11950 UPF0229 protein K09786 K09786; uncharacterized protein D JHS3_18640 hypothetical protein K09790 K09790; uncharacterized protein D JHS3_00640 UPF0434 protein K09791 K09791; uncharacterized protein D JHS3_11970 membrane protein K09792 K09792; uncharacterized protein D JHS3_31720 membrane protein K09793 K09793; uncharacterized protein D JHS3_19480 hypothetical protein K09799 K09799; uncharacterized protein D JHS3_10210 yfjF; UPF0125 protein K09801 K09801; uncharacterized protein D JHS3_29710 UPF0246 protein K09861 K09861; uncharacterized protein D JHS3_28500 hypothetical protein K09919 K09919; uncharacterized protein D JHS3_10020 hypothetical protein K09926 K09926; uncharacterized protein D JHS3_13330 hypothetical protein K09928 K09928; uncharacterized protein D JHS3_20980 hypothetical protein K09930 K09930; uncharacterized protein D JHS3_23750 UPF0276 protein K09930 K09930; uncharacterized protein D JHS3_13820 hypothetical protein K09937 K09937; uncharacterized protein D JHS3_19560 hypothetical protein K09940 K09940; uncharacterized protein D JHS3_10860 hypothetical protein K09941 K09941; uncharacterized protein D JHS3_22900 hypothetical protein K09946 K09946; uncharacterized protein D JHS3_05250 hypothetical protein K09956 K09956; uncharacterized protein D JHS3_16120 hypothetical protein K09966 K09966; uncharacterized protein D JHS3_19960 hypothetical protein K09981 K09981; uncharacterized protein D JHS3_25450 hypothetical protein K09983 K09983; uncharacterized protein D JHS3_04620 prolyl 4-hydroxylase K09990 K09990; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 15, 2025