+E Transcription factors KO #

  Transcription Factors - Ktedonobacteria bacterium brp13

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D ccbrp13_14000 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D ccbrp13_56920 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D ccbrp13_65890 O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D ccbrp13_07150 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator C DeoR family D ccbrp13_00990 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D ccbrp13_53070 GntR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D ccbrp13_01530 lacI_1; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_02130 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_02370 lacI_2; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_10450 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_11360 GntR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_14800 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_17610 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_25870 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_47460 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_48500 lacI_3; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_57020 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_68820 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ccbrp13_02600 transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator D ccbrp13_11850 transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator C GntR family D ccbrp13_61830 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D ccbrp13_02200 phosphonate metabolism transcriptional regulator PhnF K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D ccbrp13_27530 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D ccbrp13_41780 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D ccbrp13_01180 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D ccbrp13_01830 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D ccbrp13_15370 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D ccbrp13_64860 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D ccbrp13_24790 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D ccbrp13_12160 acrR; DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D ccbrp13_22920 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D ccbrp13_06460 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon C Lrp/AsnC family D ccbrp13_05620 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ccbrp13_13940 lrp; AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ccbrp13_45760 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D ccbrp13_24840 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ccbrp13_24880 ohrR; transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ccbrp13_31380 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ccbrp13_31840 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D ccbrp13_61930 MerR family transcriptional regulator, partial K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D ccbrp13_01780 cueR; Cu(I)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D ccbrp13_33940 zntR; heavy metal-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D ccbrp13_12020 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D ccbrp13_49030 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D ccbrp13_64070 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D ccbrp13_50210 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D ccbrp13_58770 MerR family transcriptional regulator K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon C Fur family D ccbrp13_05930 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D ccbrp13_12370 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D ccbrp13_40590 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D ccbrp13_46070 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D ccbrp13_26260 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ccbrp13_34850 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family D ccbrp13_43110 AsnC family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D ccbrp13_49110 AsnC family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D ccbrp13_57860 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D ccbrp13_05110 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D ccbrp13_05960 helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family C PadR family D ccbrp13_71920 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D ccbrp13_65780 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D ccbrp13_24660 transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D ccbrp13_27060 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D ccbrp13_07830 TrmB family transcriptional regulator K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D ccbrp13_28210 hypothetical protein K27097 espR; ESX-1-secreted protein regulator D ccbrp13_67860 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D ccbrp13_63110 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D ccbrp13_63500 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D ccbrp13_01260 transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D ccbrp13_66210 CdaR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D ccbrp13_44600 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ccbrp13_06840 transcriptional regulator K02443 glpP; glycerol uptake operon antiterminator D ccbrp13_06860 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator D ccbrp13_32740 rfaH; transcription antitermination protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D ccbrp13_53590 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D ccbrp13_31320 aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D ccbrp13_26250 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D ccbrp13_51590 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0