+D GENES KO #

  KEGG Orthology (KO) - Candidatus Kinetoplastibacterium desouzaii

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:kde00010] D CDSE_0624 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CDSE_0351 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CDSE_0797 triosephosphate isomerase TIM K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CDSE_0347 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CDSE_0348 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CDSE_0066 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CDSE_0718 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CDSE_0585 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CDSE_0547 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CDSE_0548 pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0098 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CDSE_0605 Zn-dependent 6-hydroxyhexanoate dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CDSE_0722 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CDSE_0307 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:kde00020] D CDSE_0714 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CDSE_0712 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0445 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CDSE_0443 succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CDSE_0547 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CDSE_0548 pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:kde00030] D CDSE_0255 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CDSE_0346 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CDSE_0364 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CDSE_0427 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CDSE_0307 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CDSE_0315 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CDSE_0351 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CDSE_0624 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:kde00040] D CDSE_0835 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CDSE_0255 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:kde00051] D CDSE_0307 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CDSE_0624 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CDSE_0351 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CDSE_0797 triosephosphate isomerase TIM K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:kde00052] D CDSE_0835 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CDSE_0307 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:kde00500] D CDSE_0835 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CDSE_0307 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:kde00520] D CDSE_0249 isomerizing glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CDSE_0374 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CDSE_0248 bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CDSE_0232 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CDSE_0830 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CDSE_0307 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CDSE_0835 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CDSE_0668 CDP-4-dehydro-6-deoxyglucose reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:kde00620] D CDSE_0722 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CDSE_0547 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CDSE_0548 pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0605 Zn-dependent 6-hydroxyhexanoate dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CDSE_0395 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CDSE_0045 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CDSE_0044 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CDSE_0752 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CDSE_0098 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CDSE_0018 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CDSE_0715 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D CDSE_0288 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CDSE_0585 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CDSE_0215 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:kde00630] D CDSE_0722 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CDSE_0254 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CDSE_0028 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:kde00640] D CDSE_0722 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0395 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CDSE_0045 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CDSE_0044 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CDSE_0752 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CDSE_0443 succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CDSE_0445 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CDSE_0098 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism D CDSE_0805 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CDSE_0804 acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:kde00660] D CDSE_0805 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CDSE_0804 acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CDSE_0443 succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CDSE_0445 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CDSE_0455 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CDSE_0456 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CDSE_0457 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:kde00562] D CDSE_0385 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CDSE_0329 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CDSE_0797 triosephosphate isomerase TIM K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:kde00190] D CDSE_0792 NADH dehydrogenase I subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D CDSE_0791 NADH dehydrogenase I subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D CDSE_0790 NADH dehydrogenase I subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D CDSE_0789 NADH dehydrogenase I subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D CDSE_0788 NADH dehydrogenase I subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D CDSE_0787 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D CDSE_0786 NADH dehydrogenase I subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D CDSE_0785 NADH dehydrogenase I subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D CDSE_0784 NADH dehydrogenase I subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D CDSE_0783 NADH dehydrogenase I subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D CDSE_0782 NADH dehydrogenase I subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D CDSE_0780 NADH dehydrogenase I subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D CDSE_0779 NADH dehydrogenase I subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D CDSE_0778 NADH dehydrogenase I subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D CDSE_0085 cytochrome D ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CDSE_0084 cytochrome bd-I oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CDSE_0265 F-type H+-transporting ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CDSE_0267 F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CDSE_0266 F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CDSE_0264 F-type H+-transporting ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CDSE_0268 F-type H+-transporting ATPase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CDSE_0261 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CDSE_0263 F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CDSE_0262 F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CDSE_0450 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CDSE_0375 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:kde00710] D CDSE_0348 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CDSE_0347 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CDSE_0351 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CDSE_0624 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CDSE_0346 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CDSE_0427 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CDSE_0797 triosephosphate isomerase TIM K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CDSE_0255 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CDSE_0364 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CDSE_0288 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CDSE_0715 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] C 00720 Other carbon fixation pathways [PATH:kde00720] D CDSE_0585 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CDSE_0288 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CDSE_0445 succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CDSE_0443 succinyl-CoA synthetase beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CDSE_0395 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CDSE_0045 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CDSE_0044 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CDSE_0752 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CDSE_0546 methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CDSE_0722 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:kde00680] D CDSE_0028 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CDSE_0718 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CDSE_0288 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CDSE_0351 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CDSE_0624 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CDSE_0722 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CDSE_0585 pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CDSE_0066 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CDSE_0702 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism D CDSE_0287 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:kde00061] D CDSE_0395 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CDSE_0045 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CDSE_0044 acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CDSE_0752 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CDSE_0740 acyl carrier protein K02078 acpP; acyl carrier protein D CDSE_0742 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CDSE_0743 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CDSE_0739 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CDSE_0741 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CDSE_0580 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CDSE_0021 enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D CDSE_0605 Zn-dependent 6-hydroxyhexanoate dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:kde00561] D CDSE_0744 glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CDSE_0506 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CDSE_0869 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:kde00564] D CDSE_0069 glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CDSE_0506 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CDSE_0869 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CDSE_0575 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CDSE_0802 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CDSE_0604 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CDSE_0520 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D CDSE_0414 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:kde01040] D CDSE_0473 stearoyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D CDSE_0328 acyl-CoA thioesterase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:kde00230] D CDSE_0307 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CDSE_0315 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CDSE_0565 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CDSE_0438 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CDSE_0472 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CDSE_0558 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CDSE_0860 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CDSE_0354 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CDSE_0353 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CDSE_0352 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CDSE_0618 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CDSE_0838 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CDSE_0507 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CDSE_0600 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CDSE_0659 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CDSE_0611 nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CDSE_0599 glutamine-hydrolysing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CDSE_0526 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CDSE_0041 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CDSE_0042 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CDSE_0142 dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D CDSE_0523 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CDSE_0757 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D CDSE_0644 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CDSE_0527 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CDSE_0531 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CDSE_0052 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] C 00240 Pyrimidine metabolism [PATH:kde00240] D CDSE_0367 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CDSE_0366 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CDSE_0440 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CDSE_0885 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CDSE_0831 dihydroorotate oxidase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CDSE_0107 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CDSE_0521 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CDSE_0571 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CDSE_0659 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CDSE_0720 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CDSE_0697 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CDSE_0507 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CDSE_0303 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CDSE_0041 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CDSE_0042 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CDSE_0593 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CDSE_0467 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CDSE_0306 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:kde00250] D CDSE_0644 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CDSE_0618 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CDSE_0440 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CDSE_0367 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CDSE_0366 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CDSE_0249 isomerizing glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CDSE_0565 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:kde00260] D CDSE_0397 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CDSE_0458 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CDSE_0625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CDSE_0028 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CDSE_0066 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CDSE_0702 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0802 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CDSE_0079 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CDSE_0755 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CDSE_0756 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:kde00270] D CDSE_0118 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CDSE_0486 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CDSE_0397 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CDSE_0458 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CDSE_0625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CDSE_0272 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CDSE_0464 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CDSE_0098 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CDSE_0702 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:kde00280] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:kde00290] D CDSE_0079 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CDSE_0455 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CDSE_0456 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CDSE_0457 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CDSE_0805 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CDSE_0804 acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CDSE_0803 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CDSE_0291 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CDSE_0215 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:kde00300] D CDSE_0625 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CDSE_0397 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CDSE_0458 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CDSE_0379 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CDSE_0829 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CDSE_0478 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CDSE_0211 acetylornithine/N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CDSE_0480 acetylornithine/N-succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CDSE_0476 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CDSE_0120 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CDSE_0149 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CDSE_0137 MocR family (DNA-binding HTH and aminotransferase domains) transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D CDSE_0880 bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramyl pentapeptide synthase MurE/MurF K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] C 00310 Lysine degradation [PATH:kde00310] D CDSE_0712 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:kde00220] D CDSE_0612 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CDSE_0367 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CDSE_0366 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CDSE_0430 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D CDSE_0282 glutamate N-acetyltransferase/amino-acid N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CDSE_0095 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CDSE_0033 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CDSE_0211 acetylornithine/N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism D CDSE_0304 arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] C 00340 Histidine metabolism [PATH:kde00340] D CDSE_0231 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CDSE_0645 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D CDSE_0223 phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CDSE_0224 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CDSE_0226 phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide isomerase HisA K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D CDSE_0227 glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CDSE_0225 cyclase HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CDSE_0228 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CDSE_0229 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0700 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0230 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:kde00350] D CDSE_0229 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0700 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0486 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CDSE_0605 Zn-dependent 6-hydroxyhexanoate dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:kde00360] D CDSE_0229 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0700 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0486 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CDSE_0667 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00380 Tryptophan metabolism D CDSE_0712 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:kde00400] D CDSE_0620 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CDSE_0143 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D CDSE_0046 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CDSE_0049 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CDSE_0145 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CDSE_0698 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CDSE_0454 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CDSE_0253 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CDSE_0252 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CDSE_0251 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CDSE_0461 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D CDSE_0250 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CDSE_0755 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CDSE_0756 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CDSE_0701 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D CDSE_0699 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CDSE_0229 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0700 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0486 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D CDSE_0057 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:kde00450] D CDSE_0812 thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CDSE_0298 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D CDSE_0028 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:kde00470] D CDSE_0875 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CDSE_0878 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CDSE_0120 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CDSE_0149 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CDSE_0667 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:kde00480] D CDSE_0272 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CDSE_0464 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CDSE_0728 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CDSE_0622 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:kde00540] D CDSE_0581 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CDSE_0873 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CDSE_0579 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CDSE_0390 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CDSE_0582 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CDSE_0534 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CDSE_0119 lipid A biosynthesis lauroyl acyltransferase htrB K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:kde00541] D CDSE_0835 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CDSE_0378 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CDSE_0376 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CDSE_0377 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CDSE_0668 CDP-4-dehydro-6-deoxyglucose reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D CDSE_0248 bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:kde00550] D CDSE_0232 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CDSE_0830 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CDSE_0876 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CDSE_0878 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CDSE_0875 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CDSE_0880 bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramyl pentapeptide synthase MurE/MurF K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] D CDSE_0573 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CDSE_0389 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CDSE_0879 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CDSE_0877 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CDSE_0146 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CDSE_0100 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CDSE_0129 penicillin-binding D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:kde00552] D CDSE_0389 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:kde00730] D CDSE_0275 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CDSE_0490 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CDSE_0637 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CDSE_0276 thiamine biosynthesis ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D CDSE_0055 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CDSE_0518 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CDSE_0687 ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CDSE_0531 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:kde00740] D CDSE_0515 3,4-dihydroxy 2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CDSE_0026 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CDSE_0516 riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CDSE_0024 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CDSE_0471 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:kde00750] D CDSE_0853 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D CDSE_0702 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CDSE_0630 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D CDSE_0411 pyridoxine 5-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] C 00760 Nicotinate and nicotinamide metabolism [PATH:kde00760] D CDSE_0758 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CDSE_0507 5'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CDSE_0436 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CDSE_0552 glutamine-hydrolysing NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CDSE_0209 nicotinamidase-like amidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CDSE_0825 NAD+ kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:kde00770] D CDSE_0805 acetolactate synthase I/II/III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CDSE_0804 acetolactate synthase I/III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CDSE_0803 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CDSE_0291 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CDSE_0138 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CDSE_0057 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CDSE_0133 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D CDSE_0468 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CDSE_0321 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CDSE_0277 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CDSE_0412 holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:kde00780] D CDSE_0071 biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D CDSE_0739 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CDSE_0741 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CDSE_0580 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CDSE_0021 enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CDSE_0132 BirA family transcriptional regulator, biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:kde00785] D CDSE_0596 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0547 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CDSE_0548 pyruvate dehydrogenase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CDSE_0714 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CDSE_0712 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis [PATH:kde00790] D CDSE_0636 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D CDSE_0257 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CDSE_0865 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CDSE_0373 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CDSE_0305 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CDSE_0563 dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CDSE_0515 3,4-dihydroxy 2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CDSE_0500 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CDSE_0499 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CDSE_0289 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CDSE_0416 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] C 00670 One carbon pool by folate [PATH:kde00670] D CDSE_0305 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CDSE_0546 methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CDSE_0028 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CDSE_0472 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CDSE_0838 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CDSE_0075 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CDSE_0306 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CDSE_0116 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:kde00860] D CDSE_0039 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CDSE_0283 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CDSE_0056 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CDSE_0152 porphobilinogen synthase AlaD K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CDSE_0446 hydroxymethylbilane synthase hemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CDSE_0447 uroporphyrinogen-III synthase hemD K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CDSE_0269 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CDSE_0437 coproporphyrinogen III oxidase CPOX K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D CDSE_0716 putative protoporphyrinogen oxidase hemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D CDSE_0823 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CDSE_0448 uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:kde00900] D CDSE_0637 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CDSE_0573 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:kde00906] D CDSE_0422 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CDSE_0346 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:kde00523] D CDSE_0378 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CDSE_0376 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CDSE_0377 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D CDSE_0378 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:kde00261] D CDSE_0397 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CDSE_0458 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CDSE_0379 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CDSE_0829 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:kde00521] D CDSE_0307 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CDSE_0385 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CDSE_0329 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CDSE_0378 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CDSE_0376 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CDSE_0377 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis D CDSE_0378 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:kde00401] D CDSE_0699 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CDSE_0229 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0700 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0486 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CDSE_0253 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CDSE_0252 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D CDSE_0742 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CDSE_0741 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CDSE_0021 enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CDSE_0740 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:kde00999] D CDSE_0118 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CDSE_0049 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D CDSE_0495 ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:kde00625] D CDSE_0605 Zn-dependent 6-hydroxyhexanoate dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:kde00626] D CDSE_0605 Zn-dependent 6-hydroxyhexanoate dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:kde03020] D CDSE_0188 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CDSE_0187 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CDSE_0154 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CDSE_0525 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:kde03010] D CDSE_0696 small subunit ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CDSE_0569 small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CDSE_0176 small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CDSE_0155 small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CDSE_0163 small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CDSE_0635 small subunit ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CDSE_0185 small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CDSE_0166 small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CDSE_0034 small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CDSE_0183 small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CDSE_0156 small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CDSE_0186 small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CDSE_0158 small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CDSE_0167 small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CDSE_0800 small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CDSE_0664 small subunit ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CDSE_0173 small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CDSE_0633 small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CDSE_0178 small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CDSE_0529 small subunit ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CDSE_0642 small subunit ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CDSE_0192 large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CDSE_0179 large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CDSE_0182 large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CDSE_0181 large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CDSE_0168 large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CDSE_0165 large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CDSE_0190 large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CDSE_0632 large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CDSE_0191 large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CDSE_0193 large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CDSE_0035 large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CDSE_0171 large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CDSE_0161 large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CDSE_0175 large subunit ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CDSE_0153 large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CDSE_0164 large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CDSE_0688 large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CDSE_0540 large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CDSE_0060 large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CDSE_0177 large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CDSE_0180 large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CDSE_0169 large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CDSE_0316 large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CDSE_0061 large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CDSE_0406 large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CDSE_0174 large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CDSE_0162 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CDSE_0683 large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CDSE_0746 large subunit ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CDSE_0405 large subunit ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CDSE_0201 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CDSE_0539 large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CDSE_0900 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0906 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0903 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0901 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CDSE_0904 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CDSE_0907 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CDSE_0902 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CDSE_0908 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CDSE_0905 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:kde00970] D CDSE_1002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1000 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CDSE_1005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CDSE_1008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CDSE_1006 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CDSE_1009 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CDSE_1010 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CDSE_1011 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CDSE_1012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CDSE_1013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CDSE_1014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CDSE_1015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CDSE_1016 tRNA-His K14226 tRNA-His; tRNA His D CDSE_1017 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CDSE_1019 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CDSE_1018 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CDSE_1021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CDSE_1026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CDSE_1027 tRNA-Met K14230 tRNA-Met; tRNA Met D CDSE_1028 tRNA-Met K14230 tRNA-Met; tRNA Met D CDSE_1029 tRNA-Met K14230 tRNA-Met; tRNA Met D CDSE_1030 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CDSE_1031 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CDSE_1034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CDSE_1032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CDSE_1033 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CDSE_1035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CDSE_1037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CDSE_1036 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CDSE_1038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CDSE_1039 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CDSE_1040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CDSE_1042 tRNA-Val K14237 tRNA-Val; tRNA Val D CDSE_1041 tRNA-Val K14237 tRNA-Val; tRNA Val D CDSE_0039 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CDSE_0105 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CDSE_0106 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CDSE_0104 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CDSE_0843 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CDSE_0666 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CDSE_0134 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CDSE_0867 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CDSE_0868 glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CDSE_0462 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CDSE_0808 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CDSE_0392 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CDSE_0298 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CDSE_0075 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CDSE_0660 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CDSE_0404 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CDSE_0470 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CDSE_0496 class II lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CDSE_0214 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CDSE_0005 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CDSE_0655 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CDSE_0541 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CDSE_0542 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CDSE_0029 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CDSE_0709 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:kde03060] D CDSE_0160 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CDSE_0195 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CDSE_0796 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CDSE_0338 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CDSE_0337 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CDSE_0339 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CDSE_0203 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CDSE_0871 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CDSE_0068 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D CDSE_0294 signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CDSE_0514 fused signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D CDSE_0736 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CDSE_0469 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:kde04122] D CDSE_0490 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CDSE_0665 putative redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CDSE_0619 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CDSE_0064 family 2 dinucleotide-utilizing molybdopterin and thiamine biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D CDSE_0295 thiamine biosynthesis ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:kde03018] D CDSE_0004 putative (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CDSE_0751 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CDSE_0718 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CDSE_0799 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CDSE_0833 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CDSE_0615 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CDSE_0670 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CDSE_0820 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CDSE_0322 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CDSE_0651 host factor-I protein K03666 hfq; host factor-I protein D CDSE_0375 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CDSE_0864 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:kde03030] D CDSE_0016 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CDSE_0431 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CDSE_0361 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CDSE_0594 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CDSE_0402 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CDSE_0730 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CDSE_0207 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CDSE_0631 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CDSE_0641 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CDSE_0139 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CDSE_0017 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CDSE_0583 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CDSE_0674 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CDSE_0768 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:kde03410] D CDSE_0763 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CDSE_0110 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CDSE_0309 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CDSE_0394 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CDSE_0773 DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CDSE_0528 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CDSE_0108 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CDSE_0674 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CDSE_0553 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CDSE_0768 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:kde03420] D CDSE_0777 superfamily II transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CDSE_0851 dual-domain excinuclease ABC subunit A uvrA K03701 uvrA; excinuclease ABC subunit A D CDSE_0141 excinuclease ABC subunit A uvrA K03701 uvrA; excinuclease ABC subunit A D CDSE_0487 excinuclease ABC subunit B uvrB K03702 uvrB; excinuclease ABC subunit B D CDSE_0413 excinuclease ABC subunit C uvrC K03703 uvrC; excinuclease ABC subunit C D CDSE_0474 DNA helicase II/ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CDSE_0674 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CDSE_0768 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:kde03430] D CDSE_0381 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CDSE_0857 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CDSE_0474 DNA helicase II/ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CDSE_0536 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CDSE_0638 exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CDSE_0553 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CDSE_0139 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CDSE_0431 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CDSE_0207 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CDSE_0361 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CDSE_0402 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CDSE_0594 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CDSE_0016 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CDSE_0730 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CDSE_0768 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:kde03440] D CDSE_0553 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CDSE_0139 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CDSE_0733 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CDSE_0363 recombination protein RecR K06187 recR; recombination protein RecR D CDSE_0441 recombination protein RecA K03553 recA; recombination protein RecA D CDSE_0674 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CDSE_0840 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CDSE_0842 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CDSE_0839 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CDSE_0606 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CDSE_0431 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CDSE_0207 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CDSE_0361 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CDSE_0402 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CDSE_0594 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CDSE_0016 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CDSE_0730 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CDSE_0270 superfamily II primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CDSE_0634 primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:kde02010] D CDSE_0235 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D CDSE_0238 ABC transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CDSE_0240 ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CDSE_0241 ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CDSE_0555 lipoprotein-releasing system permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D CDSE_0556 lipoprotein-releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CDSE_0727 lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein D CDSE_0051 lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein D CDSE_0089 lipopolysaccharide export system ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CDSE_0432 subfamily B ATP-binding cassette MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CDSE_0022 subfamily B ATP-binding cassette K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D CDSE_0080 cytochrome bd biosynthesis ABC-type transporter, ATPase and permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CDSE_0081 subfamily B ATP-binding cassette K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:kde02060] D CDSE_0465 phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D CDSE_0090 PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:kde03070] D CDSE_0338 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CDSE_0337 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CDSE_0195 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CDSE_0796 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CDSE_0160 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CDSE_0339 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CDSE_0203 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CDSE_0871 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CDSE_0514 fused signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D CDSE_0068 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D CDSE_0294 signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:kde02020] D CDSE_0738 trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CDSE_0206 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D CDSE_0073 CheY-like receiver, AAA-type ATPase, and DNA-binding domain-containing response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D CDSE_0085 cytochrome D ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CDSE_0084 cytochrome bd-I oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CDSE_0488 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:kde02024] D CDSE_0651 host factor-I protein K03666 hfq; host factor-I protein D CDSE_0253 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CDSE_0252 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CDSE_0620 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CDSE_0026 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CDSE_0203 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CDSE_0195 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CDSE_0796 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CDSE_0160 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CDSE_0339 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CDSE_0871 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CDSE_0514 fused signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D CDSE_0068 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D CDSE_0294 signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D CDSE_0639 DNA-directed RNA polymerase sigma subunit RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CDSE_0718 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:kde01501] D CDSE_0407 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D CDSE_0146 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CDSE_0100 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:kde01502] D CDSE_0875 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CDSE_0879 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CDSE_0877 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:kde01503] D CDSE_0856 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDSE_0738 trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CDSE_0213 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CDSE_0407 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D CDSE_0581 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:kde01000] C 01001 Protein kinases C 01009 Protein phosphatases and associated proteins [BR:kde01009] D CDSE_0293 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:kde01002] D CDSE_0469 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D CDSE_0599 glutamine-hydrolysing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CDSE_0725 cell wall-associated hydrolase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D CDSE_0565 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CDSE_0249 isomerizing glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CDSE_0622 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CDSE_0728 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CDSE_0476 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CDSE_0568 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CDSE_0836 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CDSE_0372 cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CDSE_0738 trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CDSE_0129 penicillin-binding D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CDSE_0483 ATP-dependent Clp, protease subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CDSE_0485 ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CDSE_0736 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CDSE_0065 carboxyl-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CDSE_0126 ATP-dependent HslUV protease, peptidase subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D CDSE_0036 PmbA protein K03592 pmbA; PmbA protein D CDSE_0621 TldD protein K03568 tldD; TldD protein D CDSE_0646 membrane protease subunit HflC K04087 hflC; modulator of FtsH protease HflC D CDSE_0647 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:kde01003] D CDSE_0146 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:kde01005] D CDSE_0581 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CDSE_0582 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CDSE_0873 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CDSE_0579 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CDSE_0390 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CDSE_0534 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CDSE_0119 lipid A biosynthesis lauroyl acyltransferase htrB K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:kde01011] D CDSE_0232 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CDSE_0830 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CDSE_0876 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CDSE_0878 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CDSE_0880 bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramyl pentapeptide synthase MurE/MurF K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] D CDSE_0875 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CDSE_0879 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CDSE_0877 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CDSE_0389 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CDSE_0530 virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D CDSE_0146 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CDSE_0100 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CDSE_0129 penicillin-binding D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CDSE_0725 cell wall-associated hydrolase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D CDSE_0256 membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D CDSE_0418 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D CDSE_0019 membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D CDSE_0591 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CDSE_0856 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:kde01004] D CDSE_0742 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CDSE_0743 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CDSE_0739 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CDSE_0741 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CDSE_0580 3R-hydroxymyristoyl ACP dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CDSE_0021 enoyl-[acyl-carrier protein] reductase I K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CDSE_0328 acyl-CoA thioesterase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D CDSE_0473 stearoyl-CoA desaturase (delta-9 desaturase) K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D CDSE_0722 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CDSE_0744 glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CDSE_0506 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CDSE_0869 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:kde01006] D CDSE_0573 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CDSE_0422 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D CDSE_0858 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:kde01007] D CDSE_0039 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CDSE_0843 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CDSE_0029 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CDSE_0709 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CDSE_0392 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CDSE_0214 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CDSE_0298 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CDSE_0470 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CDSE_0660 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CDSE_0404 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CDSE_0496 class II lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CDSE_0134 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CDSE_0655 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CDSE_0867 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CDSE_0868 glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CDSE_0808 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CDSE_0005 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CDSE_0462 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CDSE_0666 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CDSE_0541 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CDSE_0542 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CDSE_0486 aromatic-amino-acid transaminase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CDSE_0480 acetylornithine/N-succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D CDSE_0229 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0700 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CDSE_0211 acetylornithine/N-succinyldiaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CDSE_0056 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CDSE_0702 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:kde00194] D CDSE_0268 F-type H+-transporting ATPase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CDSE_0267 F-type H+-transporting ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CDSE_0266 F-type H+-transporting ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CDSE_0265 F-type H+-transporting ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CDSE_0264 F-type H+-transporting ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CDSE_0263 F-type H+-transporting ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CDSE_0262 F-type H+-transporting ATPase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CDSE_0261 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CDSE_0260 ATP synthase I-like protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:kde03000] D CDSE_0419 anaerobic CRP/FNR family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CDSE_0489 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CDSE_0132 BirA family transcriptional regulator, biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CDSE_0837 Fis family transcriptional regulator, factor for inversion K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CDSE_0766 BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D CDSE_0125 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CDSE_0027 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:kde03021] D CDSE_0154 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CDSE_0188 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CDSE_0187 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CDSE_0525 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CDSE_0639 DNA-directed RNA polymerase sigma subunit RpoD K03086 rpoD; RNA polymerase primary sigma factor D CDSE_0242 RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor D CDSE_0679 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D CDSE_0517 N-utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CDSE_0194 transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG D CDSE_0220 stringent starvation protein A K03599 sspA; stringent starvation protein A D CDSE_0219 stringent starvation protein B K03600 sspB; stringent starvation protein B D CDSE_0125 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CDSE_0368 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CDSE_0670 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:kde03019] D CDSE_0751 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CDSE_0433 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D CDSE_0735 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CDSE_0615 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CDSE_0686 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CDSE_0833 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CDSE_0718 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CDSE_0799 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CDSE_0670 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CDSE_0820 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CDSE_0322 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CDSE_0651 host factor-I protein K03666 hfq; host factor-I protein D CDSE_0375 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CDSE_0864 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CDSE_0004 putative (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome C 03011 Ribosome [BR:kde03011] D CDSE_0696 small subunit ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CDSE_0569 small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CDSE_0176 small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CDSE_0155 small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CDSE_0163 small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CDSE_0635 small subunit ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CDSE_0185 small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CDSE_0166 small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CDSE_0034 small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CDSE_0183 small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CDSE_0156 small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CDSE_0186 small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CDSE_0158 small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CDSE_0167 small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CDSE_0800 small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CDSE_0664 small subunit ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CDSE_0173 small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CDSE_0633 small subunit ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CDSE_0178 small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CDSE_0529 small subunit ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CDSE_0642 small subunit ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CDSE_0192 large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CDSE_0179 large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CDSE_0182 large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CDSE_0181 large subunit ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CDSE_0168 large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CDSE_0165 large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CDSE_0632 large subunit ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CDSE_0191 large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CDSE_0193 large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CDSE_0190 large subunit ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CDSE_0035 large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CDSE_0171 large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CDSE_0161 large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CDSE_0175 large subunit ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CDSE_0153 large subunit ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CDSE_0164 large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CDSE_0688 large subunit ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CDSE_0540 large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CDSE_0060 large subunit ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CDSE_0177 large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CDSE_0180 large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CDSE_0169 large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CDSE_0061 large subunit ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CDSE_0406 large subunit ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CDSE_0174 large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CDSE_0162 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CDSE_0683 large subunit ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CDSE_0746 large subunit ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CDSE_0405 large subunit ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CDSE_0201 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CDSE_0539 large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CDSE_0316 large subunit ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CDSE_0902 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CDSE_0908 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CDSE_0905 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CDSE_0900 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0906 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0903 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0901 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CDSE_0904 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CDSE_0907 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:kde03009] D CDSE_0735 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CDSE_0686 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CDSE_0734 GTP-binding protein Era K03595 era; GTPase D CDSE_0063 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D CDSE_0125 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CDSE_0679 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA D CDSE_0517 N-utilization substance protein B K03625 nusB; transcription antitermination protein NusB D CDSE_0194 transcriptional antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG D CDSE_0326 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CDSE_0074 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CDSE_0513 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CDSE_0345 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CDSE_0198 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CDSE_0881 S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CDSE_0093 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CDSE_0749 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CDSE_0614 TrmH family RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CDSE_0370 ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D CDSE_0435 SPOUT methyltransferase superfamily protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CDSE_0717 N6-adenine-specific DNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D CDSE_0657 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CDSE_0510 TrmA family RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CDSE_0682 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CDSE_0750 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CDSE_0706 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CDSE_0663 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D CDSE_0043 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CDSE_0475 putative adenine-specific DNA-methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D CDSE_0751 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CDSE_0433 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D CDSE_0053 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CDSE_0687 ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CDSE_0652 GTP-binding protein K03977 engA; GTPase D CDSE_0650 GTP-binding protein HflX K03665 hflX; GTPase D CDSE_0356 translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CDSE_0523 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CDSE_0677 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CDSE_0680 hypothetical protein K09748 rimP; ribosome maturation factor RimP D CDSE_0434 conserved hypothetical protein of the DUF143 family K09710 ybeB; ribosome-associated protein D CDSE_0333 putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor D CDSE_0369 putative RNA-binding protein containing KH domain K07574 yhbY; RNA-binding protein D CDSE_0320 putative GTPase, translation factor K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:kde03016] D CDSE_0115 CCA-adding tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CDSE_0039 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CDSE_0005 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CDSE_0470 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CDSE_0404 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CDSE_0298 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CDSE_0843 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CDSE_0214 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CDSE_0496 class II lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CDSE_0134 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CDSE_0666 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CDSE_0462 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CDSE_0808 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CDSE_0392 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CDSE_0660 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CDSE_0655 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CDSE_0541 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CDSE_0542 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CDSE_0029 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CDSE_0709 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CDSE_0222 Hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CDSE_0460 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CDSE_0676 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CDSE_0490 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CDSE_0356 translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CDSE_0858 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CDSE_0200 tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CDSE_0199 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CDSE_0205 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CDSE_0562 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CDSE_0047 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D CDSE_0848 sulfate-transporting ATPase K06020 ettA; energy-dependent translational throttle protein EttA D CDSE_0867 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CDSE_0868 glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CDSE_0502 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CDSE_0453 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D CDSE_0336 bifunctional tRNA thiolation and methylation protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CDSE_0384 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D CDSE_0662 tRNA (guanine-N1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CDSE_0070 TrmH family, group 2 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CDSE_0619 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CDSE_0665 putative redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CDSE_0492 iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein D CDSE_0590 GcvT-like aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D CDSE_0341 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CDSE_0289 queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CDSE_0500 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CDSE_0499 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CDSE_0416 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CDSE_0671 conserved hypothetical protein of the DUF208 family K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D CDSE_0340 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CDSE_0396 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CDSE_0774 metal-dependent protease, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CDSE_0505 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CDSE_0855 putative ATPase or kinase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CDSE_0852 family 1 dinucleotide-utilizing molybdopterin and thiamine biosynthesis protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CDSE_0615 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CDSE_0799 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:kde03012] D CDSE_0678 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CDSE_0463 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CDSE_0570 elongation factor EF-Ts K02357 tsf; elongation factor Ts D CDSE_0170 elongation factor Tu K02358 tuf; elongation factor Tu D CDSE_0196 elongation factor Tu K02358 tuf; elongation factor Tu D CDSE_0184 elongation factor EF-G K02355 fusA; elongation factor G D CDSE_0284 peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1 D CDSE_0572 ribosome recycling factor K02838 frr; ribosome recycling factor D CDSE_0285 methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CDSE_0317 PTH1 family peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CDSE_0159 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CDSE_0400 elongation factor EF-P K02356 efp; elongation factor P D CDSE_0497 peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2 D CDSE_0217 peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:kde03110] D CDSE_0420 ATP-dependent Clp protease ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CDSE_0484 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CDSE_0127 ATP-dependent HslUV protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D CDSE_0293 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CDSE_0820 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CDSE_0494 molecular chaperone HscA K04044 hscA; molecular chaperone HscA D CDSE_0322 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CDSE_0819 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CDSE_0493 molecular chaperone HscB K04082 hscB; molecular chaperone HscB D CDSE_0821 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D CDSE_0323 chaperonin GroES K04078 groES; chaperonin GroES D CDSE_0738 trypsin-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CDSE_0372 cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CDSE_0261 F-type H+-transporting ATPase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CDSE_0068 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D CDSE_0391 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CDSE_0512 peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D CDSE_0767 peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D CDSE_0325 peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D CDSE_0832 Thiol-disulfide isomerase K03671 TXN; thioredoxin D CDSE_0504 thioredoxin domain-containing protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D CDSE_0286 monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D CDSE_0213 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CDSE_0566 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] C 04131 Membrane trafficking [BR:kde04131] D CDSE_0659 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CDSE_0347 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CDSE_0066 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CDSE_0293 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:kde03051] D CDSE_0293 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:kde03032] D CDSE_0017 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CDSE_0613 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CDSE_0543 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CDSE_0695 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CDSE_0206 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D CDSE_0631 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CDSE_0641 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CDSE_0139 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CDSE_0431 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CDSE_0207 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CDSE_0730 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CDSE_0402 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CDSE_0594 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CDSE_0016 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CDSE_0361 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CDSE_0583 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CDSE_0674 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CDSE_0768 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CDSE_0861 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D CDSE_0704 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CDSE_0208 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CDSE_0210 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:kde03036] D CDSE_0735 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CDSE_0613 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CDSE_0543 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CDSE_0695 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CDSE_0206 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D CDSE_0837 Fis family transcriptional regulator, factor for inversion K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CDSE_0651 host factor-I protein K03666 hfq; host factor-I protein D CDSE_0811 S-DNA-T family DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CDSE_0874 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CDSE_0002 cell division protein ZapA K09888 zapA; cell division protein ZapA D CDSE_0278 hypothetical protein K18778 zapD; cell division protein ZapD D CDSE_0856 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CDSE_0407 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D CDSE_0844 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CDSE_0846 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CDSE_0847 cell division topological specificity factor K03608 minE; cell division topological specificity factor D CDSE_0103 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CDSE_0102 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CDSE_0101 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CDSE_0099 rod shape determining protein RodA K05837 rodA; rod shape determining protein RodA D CDSE_0199 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CDSE_0198 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CDSE_0122 integrase/recombinase XerC K03733 xerC; integrase/recombinase XerC D CDSE_0357 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D CDSE_0299 chromosome partitioning ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CDSE_0150 GTP-binding protein engB K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:kde03400] D CDSE_0092 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CDSE_0110 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CDSE_0763 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CDSE_0279 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CDSE_0467 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CDSE_0773 DNA polymerase bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CDSE_0394 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CDSE_0309 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CDSE_0528 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CDSE_0108 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CDSE_0553 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CDSE_0768 DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CDSE_0674 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CDSE_0851 dual-domain excinuclease ABC subunit A uvrA K03701 uvrA; excinuclease ABC subunit A D CDSE_0141 excinuclease ABC subunit A uvrA K03701 uvrA; excinuclease ABC subunit A D CDSE_0487 excinuclease ABC subunit B uvrB K03702 uvrB; excinuclease ABC subunit B D CDSE_0413 excinuclease ABC subunit C uvrC K03703 uvrC; excinuclease ABC subunit C D CDSE_0474 DNA helicase II/ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CDSE_0188 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CDSE_0187 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CDSE_0154 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CDSE_0525 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CDSE_0777 superfamily II transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CDSE_0381 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CDSE_0857 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D CDSE_0536 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CDSE_0638 exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CDSE_0431 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CDSE_0207 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CDSE_0730 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CDSE_0402 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CDSE_0594 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CDSE_0016 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CDSE_0361 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CDSE_0139 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CDSE_0441 recombination protein RecA K03553 recA; recombination protein RecA D CDSE_0840 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CDSE_0842 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CDSE_0839 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CDSE_0270 superfamily II primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CDSE_0634 primosomal replication protein N K02686 priB; primosomal replication protein N D CDSE_0423 DNA repair protein RadA/Sms K04485 radA; DNA repair protein RadA/Sms D CDSE_0606 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CDSE_0733 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CDSE_0363 recombination protein RecR K06187 recR; recombination protein RecR D CDSE_0826 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CDSE_0704 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CDSE_0208 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CDSE_0613 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CDSE_0837 Fis family transcriptional regulator, factor for inversion K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CDSE_0543 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CDSE_0695 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CDSE_0442 regulatory protein K03565 recX; regulatory protein D CDSE_0041 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CDSE_0042 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:kde03029] D CDSE_0678 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CDSE_0463 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CDSE_0570 elongation factor EF-Ts K02357 tsf; elongation factor Ts D CDSE_0170 elongation factor Tu K02358 tuf; elongation factor Tu D CDSE_0196 elongation factor Tu K02358 tuf; elongation factor Tu D CDSE_0184 elongation factor EF-G K02355 fusA; elongation factor G D CDSE_0734 GTP-binding protein Era K03595 era; GTPase D CDSE_0029 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CDSE_0404 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CDSE_0134 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CDSE_0214 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CDSE_0105 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CDSE_0106 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CDSE_0104 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CDSE_0139 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CDSE_0576 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D CDSE_0820 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CDSE_0821 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D CDSE_0322 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CDSE_0323 chaperonin GroES K04078 groES; chaperonin GroES D CDSE_0819 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CDSE_0490 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CDSE_0493 molecular chaperone HscB K04082 hscB; molecular chaperone HscB D CDSE_0286 monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D CDSE_0299 chromosome partitioning ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CDSE_0203 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CDSE_0293 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:kde02000] D CDSE_0432 subfamily B ATP-binding cassette MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CDSE_0022 subfamily B ATP-binding cassette K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D CDSE_0080 cytochrome bd biosynthesis ABC-type transporter, ATPase and permease K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CDSE_0081 subfamily B ATP-binding cassette K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CDSE_0884 ATPase component of ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein D CDSE_0238 ABC transport system substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CDSE_0240 ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CDSE_0241 ABC transport system ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CDSE_0235 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D CDSE_0727 lipopolysaccharide export system permease protein K07091 lptF; lipopolysaccharide export system permease protein D CDSE_0051 lipopolysaccharide export system permease protein K11720 lptG; lipopolysaccharide export system permease protein D CDSE_0089 lipopolysaccharide export system ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CDSE_0555 lipoprotein-releasing system permease protein K09808 lolC_E; lipoprotein-releasing system permease protein D CDSE_0556 lipoprotein-releasing system ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CDSE_0233 antibiotic transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CDSE_0234 ABC-2 type transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CDSE_0097 Di- and tricarboxylate transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CDSE_0685 MATE family multidrug resistance protein K26939 norM; MATE family, multidrug efflux pump D CDSE_0772 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D CDSE_0415 arabinose efflux permease K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D CDSE_0465 phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D CDSE_0090 PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CDSE_0220 stringent starvation protein A K03599 sspA; stringent starvation protein A D CDSE_0732 integral membrane protein K19416 yccA; modulator of FtsH protease D CDSE_0383 small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D CDSE_0550 small-conductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel D CDSE_0327 magnesium transporter K06213 mgtE; magnesium transporter D CDSE_0006 biopolymer transport protein K03562 tolQ; biopolymer transport protein TolQ D CDSE_0705 OOP family OmpA-OmpF porin K03286 TC.OOP; OmpA-OmpF porin, OOP family D CDSE_0576 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D CDSE_0653 quinoprotein K17713 bamB; outer membrane protein assembly factor BamB D CDSE_0707 lipoprotein K05807 bamD; outer membrane protein assembly factor BamD D CDSE_0827 small protein A K06186 bamE; outer membrane protein assembly factor BamE D CDSE_0300 surface antigen K07278 tamA; translocation and assembly module TamA D CDSE_0302 conserved hypothetical protein of the DUF490 family K09800 tamB; translocation and assembly module TamB D CDSE_0324 LPS-assembly protein K04744 lptD; LPS-assembly protein D CDSE_0332 magnesium and cobalt transporter K06189 corC; hemolysin (HlyC) family protein D CDSE_0816 arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CDSE_0673 putative divalent heavy-metal cation transporter K16267 zipB; zinc and cadmium transporter D CDSE_0814 multidrug efflux protein K03297 emrE; small multidrug resistance pump D CDSE_0350 PiT family inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D CDSE_0014 ESS family glutamate:Na+ symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CDSE_0417 CPA1 family monovalent cation:H+ antiporter K03316 nhaP; Na+:H+ antiporter D CDSE_0245 CPA1 family monovalent cation:H+ antiporter K03316 nhaP; Na+:H+ antiporter D CDSE_0530 virulence factor K03980 murJ; putative peptidoglycan lipid II flippase D CDSE_0109 lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO D CDSE_0588 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D CDSE_0567 multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein D CDSE_0010 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CDSE_0009 TolB protein K03641 tolB; TolB protein D CDSE_0407 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system C 02044 Secretion system [BR:kde02044] D CDSE_0871 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CDSE_0068 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D CDSE_0338 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CDSE_0195 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CDSE_0337 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CDSE_0796 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CDSE_0160 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CDSE_0294 signal recognition particle subunit SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CDSE_0514 fused signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D CDSE_0339 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CDSE_0203 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins C 02022 Two-component system [BR:kde02022] D CDSE_0073 CheY-like receiver, AAA-type ATPase, and DNA-binding domain-containing response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:kde04812] D CDSE_0103 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CDSE_0874 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CDSE_0844 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CDSE_0846 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CDSE_0847 cell division topological specificity factor K03608 minE; cell division topological specificity factor C 04147 Exosome [BR:kde04147] D CDSE_0293 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CDSE_0718 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CDSE_0347 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CDSE_0348 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CDSE_0322 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CDSE_0820 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CDSE_0600 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CDSE_0170 elongation factor Tu K02358 tuf; elongation factor Tu D CDSE_0196 elongation factor Tu K02358 tuf; elongation factor Tu D CDSE_0222 Hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CDSE_0098 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CDSE_0531 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CDSE_0624 fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CDSE_0152 porphobilinogen synthase AlaD K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CDSE_0838 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CDSE_0549 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0710 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CDSE_0690 electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D CDSE_0797 triosephosphate isomerase TIM K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CDSE_0066 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:kde02048] D CDSE_0874 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CDSE_0103 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CDSE_0039 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CDSE_0490 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:kde01504] D CDSE_0407 membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:kde03100] D CDSE_1002 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1000 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1003 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CDSE_1007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CDSE_1005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CDSE_1008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CDSE_1006 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CDSE_1009 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CDSE_1010 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CDSE_1011 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CDSE_1012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CDSE_1013 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CDSE_1014 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CDSE_1015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CDSE_1016 tRNA-His K14226 tRNA-His; tRNA His D CDSE_1017 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CDSE_1019 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CDSE_1018 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CDSE_1021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1024 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1023 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CDSE_1025 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CDSE_1026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CDSE_1027 tRNA-Met K14230 tRNA-Met; tRNA Met D CDSE_1028 tRNA-Met K14230 tRNA-Met; tRNA Met D CDSE_1029 tRNA-Met K14230 tRNA-Met; tRNA Met D CDSE_1030 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CDSE_1031 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CDSE_1034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CDSE_1032 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CDSE_1033 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CDSE_1035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CDSE_1037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CDSE_1036 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CDSE_1038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CDSE_1039 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CDSE_1040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CDSE_1042 tRNA-Val K14237 tRNA-Val; tRNA Val D CDSE_1041 tRNA-Val K14237 tRNA-Val; tRNA Val D CDSE_0900 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0906 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0903 16S small subunit ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CDSE_0901 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CDSE_0904 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CDSE_0907 23S large subunit ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CDSE_0902 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CDSE_0908 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CDSE_0905 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CDSE_0721 electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D CDSE_0798 NADPH2:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CDSE_0628 peroxiredoxin Q/BCP K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CDSE_0775 peroxiredoxin (alkyl hydroperoxide reductase subunit C) K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D CDSE_0609 ferredoxin--NADP+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CDSE_0761 ferredoxin--NADP+ reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CDSE_0001 phosphatidylglycerol:prolipoprotein diacylglycerol transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CDSE_0584 PEP synthetase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D CDSE_0091 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D CDSE_0557 putative PHP family metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D CDSE_0595 TatD DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CDSE_0076 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CDSE_0748 septum formation protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D CDSE_0297 threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D CDSE_0762 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CDSE_0760 ferredoxin K05524 fdxA; ferredoxin D CDSE_0491 nitrogen fixation protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D CDSE_0691 electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D CDSE_0077 putative TIM-barrel fold enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D CDSE_0449 HemY protein K02498 hemY; HemY protein C 99988 Secondary metabolism D CDSE_0382 putative flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D CDSE_0037 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase D CDSE_0038 hypothetical protein K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CDSE_0481 CspA family beta-ribbon cold shock protein K03704 cspA; cold shock protein D CDSE_0538 CspA family beta-ribbon cold shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D CDSE_0482 trigger factor K03545 tig; trigger factor D CDSE_0586 SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D CDSE_0426 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D CDSE_0809 recombination factor protein RarA K07478 ycaJ; putative ATPase D CDSE_0509 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease C 99979 Viral proteins C 99998 Others D CDSE_0362 conserved hypothetical protein of the DUF149 family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CDSE_0793 porin K03285 TC.GBP; general bacterial porin, GBP family C 99978 Cell growth D CDSE_0764 intracellular septation protein K06190 ispZ; intracellular septation protein C 99993 Cell motility C 99995 Signaling proteins D CDSE_0603 carbon starvation protein K06200 cstA; carbon starvation protein D CDSE_0675 GTP-binding protein K06207 typA; GTP-binding protein D CDSE_0334 PhoH-like phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D CDSE_0810 outer membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein D CDSE_0236 lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D CDSE_0577 outer membrane protein K06142 hlpA; outer membrane protein D CDSE_0508 lipoprotein NlpD K06194 nlpD; lipoprotein NlpD C 99994 Others D CDSE_0147 CyaY protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY B B 09194 Poorly characterized C 99996 General function prediction only D CDSE_0564 membrane protein required for colicin V production K03558 cvpA; membrane protein required for colicin V production D CDSE_0032 Fe-S cluster assembly scaffold protein K15724 erpA; iron-sulfur cluster insertion protein D CDSE_0723 glycolate and propanediol utilization protein K11477 glcG; glc operon protein GlcG C 99997 Function unknown D CDSE_0280 AAA+ superfamily ATPase K06923 K06923; uncharacterized protein D CDSE_0117 Fe-S protein K06938 K06938; uncharacterized protein D CDSE_0130 putative hydrolase of the alpha/beta superfamily K07018 K07018; uncharacterized protein D CDSE_0204 conserved hypothetical protein of the DUF37 family K08998 K08998; uncharacterized protein D CDSE_0498 Yqey-like protein K09117 K09117; uncharacterized protein D CDSE_0128 conserved hypothetical protein of the DUF493 family K09158 K09158; uncharacterized protein D CDSE_0587 hypothetical protein K09801 K09801; uncharacterized protein D CDSE_0807 conserved hypothetical protein of the DUF328 family K09861 K09861; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024