+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Klebsiella oxytoca KONIH1

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D KONIH1_21745 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D KONIH1_02430 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C KONIH1_21740 GTP-binding protein Era K03595 era; GTPase C KONIH1_26235 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C KONIH1_04970 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor C KONIH1_29755 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor C KONIH1_31270 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor C KONIH1_26170 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C KONIH1_06540 nusB; transcription antiterminator NusB K03625 nusB; transcription antitermination protein NusB C KONIH1_01400 nusG; transcription antiterminator NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D KONIH1_20190 16S rRNA pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D KONIH1_04430 ksgA; 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D KONIH1_26735 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D KONIH1_03995 rsmC; 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D KONIH1_27430 rsmD; 16S rRNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D KONIH1_25000 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D KONIH1_18030 yebU; RNA methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D KONIH1_29340 gidB; 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D KONIH1_04620 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D KONIH1_26055 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D KONIH1_27725 methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] C 23S rRNA modification factors D KONIH1_17960 rrmA; 23S rRNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D KONIH1_02525 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D KONIH1_26215 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D KONIH1_09130 23S rRNA methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D KONIH1_25850 23S rRNA methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D KONIH1_08180 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D KONIH1_10370 23S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D KONIH1_27815 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D KONIH1_10235 rlmL; 23S rRNA methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D KONIH1_23715 23S rRNA methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D KONIH1_21525 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D KONIH1_23580 rumA; 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D KONIH1_09810 rumB; 23S rRNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D KONIH1_17420 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D KONIH1_04475 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D KONIH1_12155 23S rRNA pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D KONIH1_11265 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D KONIH1_21880 rluD; 23S rRNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D KONIH1_11575 23S rRNA pseudouridylate synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D KONIH1_01670 23S rRNA pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D KONIH1_21810 methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] B ribosomal protein modification factors C KONIH1_04005 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C KONIH1_11230 ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C KONIH1_09775 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] C KONIH1_13705 ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C KONIH1_22150 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C KONIH1_09330 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C KONIH1_10055 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C KONIH1_26625 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] C KONIH1_20850 SAM-dependent methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] C KONIH1_11530 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] C KONIH1_03385 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] B rRNA processing factors C KONIH1_21745 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C KONIH1_11260 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C KONIH1_26560 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] C KONIH1_25015 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C KONIH1_13125 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] C KONIH1_26135 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C KONIH1_21790 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] B GTPases C KONIH1_21740 GTP-binding protein Era K03595 era; GTPase C KONIH1_02425 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C KONIH1_21495 GTP-binding protein Der K03977 engA; GTPase C KONIH1_26235 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C KONIH1_02490 GTPase HflX K03665 hflX; GTPase B Other maturation factors C KONIH1_26710 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C KONIH1_28540 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C KONIH1_26160 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C KONIH1_26175 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP C KONIH1_07160 ribosome-associated protein K14761 rlbA; ribosome-associated protein C KONIH1_08185 ribosome-associated protein K09710 ybeB; ribosome-associated protein C KONIH1_08260 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor C KONIH1_26220 RNA-binding protein YhbY K07574 yhbY; RNA-binding protein C KONIH1_28310 hypothetical protein K14762 yibL; ribosome-associated protein C KONIH1_02785 hypothetical protein K09889 yjgA; ribosome-associated protein C KONIH1_26335 ribosome hibernation promoting factor HPF K05808 hpf; ribosome hibernation promoting factor C KONIH1_21890 translation inhibitor protein RaiA K05809 raiA; ribosome-associated inhibitor A C KONIH1_14210 30S ribosomal protein S22 K02972 sra; stationary-phase-induced ribosome-associated protein C KONIH1_17275 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase C KONIH1_11280 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024