+D GENES KO #

  KEGG Orthology (KO) - Kosmotoga olearia

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:kol00010] D Kole_1176 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_1870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_0178 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Kole_1624 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Kole_0851 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Kole_1014 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_1696 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_0646 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Kole_1652 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Kole_2022 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Kole_2020 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Kole_0996 glyceraldehyde-3-phosphate dehydrogenase, type II K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Kole_0995 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Kole_2021 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Kole_0519 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Kole_1526 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Kole_1705 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Kole_1625 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Kole_0918 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Kole_1743 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_0381 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Kole_0382 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Kole_0379 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Kole_2137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_2160 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_1740 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_0320 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2136 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2159 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_0912 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Kole_1524 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Kole_1918 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Kole_0847 hypothetical protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:kol00020] D Kole_1230 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Kole_1227 Isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_2137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_2160 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_1740 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_0320 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2136 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2159 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_0319 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Kole_2158 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Kole_2161 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Kole_1741 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Kole_2094 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Kole_2093 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Kole_0847 hypothetical protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Kole_0381 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Kole_0382 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Kole_0379 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:kol00030] D Kole_0178 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Kole_1941 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Kole_0992 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Kole_0993 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Kole_0893 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Kole_1872 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Kole_0020 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Kole_1687 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Kole_0407 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15] D Kole_0601 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D Kole_0581 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15] D Kole_0045 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Kole_1918 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Kole_1733 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Kole_1088 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Kole_1768 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Kole_1652 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Kole_0646 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Kole_1624 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Kole_0851 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Kole_1014 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_1696 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:kol00040] D Kole_1941 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Kole_0162 carbohydrate kinase FGGY K00854 xylB; xylulokinase [EC:2.7.1.17] D Kole_0939 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Kole_1643 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:kol00051] D Kole_0610 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Kole_1070 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Kole_0030 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Kole_1022 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Kole_0460 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Kole_1643 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Kole_1624 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Kole_0851 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Kole_1014 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_1696 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_0646 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Kole_0346 PfkB domain protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D Kole_0939 Alcohol dehydrogenase GroES domain protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D Kole_1652 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Kole_2022 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Kole_0020 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:kol00052] D Kole_0950 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Kole_0949 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Kole_1921 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Kole_0202 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Kole_1918 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Kole_1176 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_1870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_0522 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D Kole_1624 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Kole_0851 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Kole_1014 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_1696 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_0737 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D Kole_0686 D-tagatose-bisphosphate aldolase class II accessory protein AgaZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D Kole_0585 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Kole_1174 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:kol00500] D Kole_1069 Sucrose-phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D Kole_0585 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Kole_1174 alpha amylase catalytic region K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D Kole_1034 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Kole_0409 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Kole_0899 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Kole_0900 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Kole_1922 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Kole_0378 Domain of unknown function DUF1957 K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Kole_0242 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Kole_1663 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D Kole_1455 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41] D Kole_0843 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1] D Kole_2007 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Kole_0186 alpha amylase catalytic region K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D Kole_1039 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D Kole_0299 glycosyl transferase group 1 K13057 treT; trehalose synthase [EC:2.4.1.245] D Kole_1918 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Kole_1176 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_1870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_0178 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Kole_0610 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Kole_1070 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:kol00520] D Kole_0876 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Kole_1989 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Kole_0731 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D Kole_0610 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Kole_1070 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Kole_0736 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_1537 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_0688 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_1185 sugar isomerase (SIS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_0047 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Kole_1734 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Kole_1365 Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Kole_1988 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D Kole_0878 glucokinase regulatory-like protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D Kole_0880 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D Kole_1771 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Kole_0261 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Kole_1183 N-acylglucosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D Kole_1361 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Kole_1639 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Kole_1641 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Kole_1631 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D Kole_1176 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_1870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_1918 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Kole_0950 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Kole_0949 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Kole_1921 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Kole_0202 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Kole_0178 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Kole_0030 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Kole_0460 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Kole_1022 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Kole_1760 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Kole_0899 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Kole_0900 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:kol00620] D Kole_0381 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Kole_0382 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Kole_0379 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Kole_2137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_2160 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_1740 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_0320 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2136 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2159 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_1524 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Kole_1651 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Kole_0239 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Kole_1625 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Kole_0918 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Kole_0583 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Kole_0912 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Kole_1005 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Kole_0994 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1] D Kole_0487 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Kole_1395 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Kole_1742 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Kole_2094 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Kole_2093 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Kole_0847 hypothetical protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Kole_1743 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:kol00630] D Kole_1230 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Kole_0962 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Kole_1369 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Kole_1371 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Kole_1372 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Kole_0882 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D Kole_2169 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81] D Kole_0290 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1744 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1456 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Kole_1620 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Kole_1619 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Kole_1622 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_1621 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Kole_1768 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Kole_0991 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] C 00640 Propanoate metabolism [PATH:kol00640] D Kole_1651 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Kole_0239 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_0381 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Kole_0382 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Kole_0379 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Kole_1369 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Kole_1371 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Kole_1372 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Kole_0912 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Kole_0399 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D Kole_0505 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:kol00650] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Kole_0597 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Kole_0596 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Kole_2163 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Kole_2165 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7] D Kole_1438 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Kole_2164 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D Kole_0962 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Kole_1742 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Kole_1366 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Kole_1367 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Kole_0991 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D Kole_0381 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Kole_0382 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Kole_0379 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Kole_2137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_2160 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_1740 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_0320 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2136 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2159 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_0163 short-chain dehydrogenase/reductase SDR K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:kol00660] D Kole_1229 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Kole_1228 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] C 00562 Inositol phosphate metabolism [PATH:kol00562] D Kole_2144 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Kole_0167 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Kole_1436 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Kole_0987 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D Kole_0988 Myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D Kole_0989 thiamine pyrophosphate protein central region K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D Kole_0990 Myo-inositol catabolism IolB domain protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D Kole_2022 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:kol00190] D Kole_2054 NADH ubiquinone oxidoreductase 20 kDa subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Kole_2053 NADH dehydrogenase (ubiquinone) 30 kDa subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Kole_2052 NADH dehydrogenase (quinone) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Kole_0180 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Kole_0183 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Kole_0182 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Kole_2055 respiratory-chain NADH dehydrogenase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Kole_0571 respiratory-chain NADH dehydrogenase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Kole_0220 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Kole_0218 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Kole_0219 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Kole_0221 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Kole_0217 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Kole_0224 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Kole_0222 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Kole_0223 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Kole_1132 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Kole_0517 hypothetical protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:kol00710] D Kole_0995 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Kole_2021 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Kole_2020 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Kole_0996 glyceraldehyde-3-phosphate dehydrogenase, type II K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Kole_1652 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Kole_0646 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Kole_0992 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Kole_0993 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Kole_0893 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Kole_0020 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Kole_2022 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Kole_1941 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Kole_1872 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Kole_0847 hypothetical protein K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D Kole_1743 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] C 00720 Other carbon fixation pathways [PATH:kol00720] D Kole_0381 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Kole_0382 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Kole_0379 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Kole_1743 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Kole_2094 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Kole_2093 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Kole_2137 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_2160 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_1740 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D Kole_0320 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2136 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_2159 thiamine pyrophosphate protein domain protein TPP-binding K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D Kole_0319 pyruvate ferredoxin/flavodoxin oxidoreductase K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Kole_2158 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D Kole_2161 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Kole_1741 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D Kole_1227 Isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Kole_1369 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Kole_1372 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Kole_1371 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Kole_2114 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Kole_2113 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Kole_1686 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Kole_0239 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Kole_1651 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:kol00680] D Kole_1456 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Kole_1768 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Kole_1705 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Kole_1652 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Kole_0646 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D Kole_1624 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Kole_0851 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D Kole_1014 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_1696 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Kole_1651 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Kole_0381 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Kole_0382 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Kole_0379 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Kole_0519 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Kole_1526 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Kole_1931 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Kole_1930 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D Kole_0919 protein of unknown function DUF129 K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] C 00910 Nitrogen metabolism [PATH:kol00910] D Kole_1154 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Kole_0485 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Kole_1402 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Kole_0297 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Kole_0290 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1744 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_2051 4Fe-4S ferredoxin iron-sulfur binding domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Kole_1828 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Kole_1432 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:kol00920] D Kole_1473 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Kole_1345 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Kole_1344 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Kole_2086 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:kol00061] D Kole_0972 acyl carrier protein K02078 acpP; acyl carrier protein D Kole_1475 acyl carrier protein K02078 acpP; acyl carrier protein D Kole_0971 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Kole_0969 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Kole_0973 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Kole_0050 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Kole_0968 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Kole_0970 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:kol00071] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Kole_1524 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:kol00561] D Kole_1768 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Kole_0505 iron-containing alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D Kole_0534 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Kole_1536 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Kole_0216 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Kole_1443 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Kole_1111 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Kole_0752 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Kole_1108 glycosyl transferase family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D Kole_0750 glycosyl transferase group 1 K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208] D Kole_0522 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:kol00564] D Kole_0002 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Kole_0159 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Kole_0216 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Kole_1443 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Kole_1111 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Kole_1008 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Kole_1607 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Kole_1562 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:kol00600] D Kole_0522 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:kol00230] D Kole_1715 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Kole_0045 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D Kole_1918 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Kole_1733 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Kole_0291 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)-like protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Kole_0179 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Kole_0902 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Kole_0744 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Kole_1712 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Kole_1474 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Kole_0004 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Kole_0896 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Kole_1940 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Kole_0818 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Kole_1848 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Kole_0530 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Kole_1955 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Kole_1666 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D Kole_0304 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D Kole_2088 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Kole_1113 5'-Nucleotidase domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Kole_1881 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Kole_0858 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Kole_1432 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:kol00240] D Kole_1706 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Kole_0896 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Kole_0858 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Kole_1690 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Kole_0274 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Kole_0212 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Kole_0384 Phosphoribulokinase / Uridine kinase family protein K00876 udk; uridine kinase [EC:2.7.1.48] D Kole_1557 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D Kole_0902 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Kole_0744 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Kole_1255 purine or other phosphorylase family 1 K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Kole_1457 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D Kole_1113 5'-Nucleotidase domain protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D Kole_1400 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D Kole_1573 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D Kole_1716 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D Kole_0530 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Kole_1666 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D Kole_0304 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D Kole_0321 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Kole_2040 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Kole_1459 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D Kole_0028 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Kole_2072 amidohydrolase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:kol00250] D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_0509 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Kole_0248 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Kole_1285 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Kole_0820 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K13566 NIT2; omega-amidase [EC:3.5.1.3] D Kole_0398 fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Kole_0092 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Kole_0093 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Kole_2051 4Fe-4S ferredoxin iron-sulfur binding domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Kole_1828 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Kole_1402 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Kole_0297 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Kole_1012 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Kole_0290 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1744 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_0736 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_1537 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_0688 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_1185 sugar isomerase (SIS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:kol00260] D Kole_0103 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Kole_0108 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Kole_2075 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Kole_1456 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Kole_2169 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81] D Kole_1768 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Kole_0519 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Kole_1526 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Kole_1931 Phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3] D Kole_2168 aminotransferase class V K13290 K13290; serine---pyruvate transaminase [EC:2.6.1.51] D Kole_2126 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Kole_2125 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D Kole_1620 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Kole_1619 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Kole_1622 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_1621 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Kole_0695 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:kol00270] D Kole_1345 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Kole_1344 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Kole_2086 Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 cysK; cysteine synthase [EC:2.5.1.47] D Kole_0146 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Kole_0285 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Kole_0270 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Kole_0271 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Kole_2130 Adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D Kole_2044 Cytosine deaminase and related metal-dependent hydrolase-like protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Kole_1454 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Kole_0404 Cystathionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Kole_1583 putative GAF sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D Kole_0103 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Kole_0108 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Kole_0349 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_0912 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00280 Valine, leucine and isoleucine degradation [PATH:kol00280] D Kole_0349 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_1369 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D Kole_1371 cobalamin B12-binding domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D Kole_1372 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:kol00290] D Kole_1229 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Kole_1228 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Kole_0349 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:kol00300] D Kole_0103 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Kole_0108 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Kole_0106 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Kole_0105 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Kole_0097 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Kole_0102 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Kole_1021 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Kole_0107 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Kole_0871 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Kole_0104 Tetrahydrodipicolinate succinyltransferase domain protein K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89] D Kole_0532 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D Kole_2166 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D Kole_1383 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Kole_0511 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Kole_1382 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Kole_0512 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:kol00310] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Kole_0963 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] D Kole_0959 D-Lysine 56-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3] D Kole_0958 cobalamin B12-binding domain protein K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3] D Kole_0964 zinc-binding alcohol dehydrogenase K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11] D Kole_0965 protein of unknown function DUF849 K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D Kole_0966 thioesterase superfamily protein K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14] D Kole_0597 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Kole_0596 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Kole_0356 dihydrodipicolinate reductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] D Kole_0085 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:kol00220] D Kole_1433 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Kole_0092 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Kole_0093 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Kole_0290 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1744 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1432 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D Kole_1402 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Kole_0297 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_0095 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Kole_0096 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Kole_0094 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Kole_0097 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Kole_0102 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:kol00330] D Kole_1584 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Kole_0271 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Kole_0270 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Kole_1186 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D Kole_1107 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Kole_1012 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D Kole_1419 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Kole_1418 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_0085 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Kole_0356 dihydrodipicolinate reductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] C 00340 Histidine metabolism [PATH:kol00340] D Kole_0127 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D Kole_0448 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D Kole_1719 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D Kole_1720 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] C 00350 Tyrosine metabolism [PATH:kol00350] D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1524 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:kol00360] D Kole_0623 Coenzyme F390 synthetase-like protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1086 GCN5-related N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D Kole_0085 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00380 Tryptophan metabolism [PATH:kol00380] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:kol00400] D Kole_0037 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Kole_0695 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:kol00410] D Kole_1543 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Kole_1649 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Kole_2072 amidohydrolase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] C 00430 Taurine and hypotaurine metabolism [PATH:kol00430] D Kole_0239 Propanediol utilization protein K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D Kole_1651 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:kol00450] D Kole_0146 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Kole_0404 Cystathionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D Kole_1489 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Kole_0306 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Kole_2068 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Kole_2082 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D Kole_0017 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:kol00460] D Kole_1034 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Kole_0409 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Kole_0248 Asparaginase/glutaminase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D Kole_1456 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:kol00470] D Kole_1659 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Kole_0085 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Kole_0926 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Kole_1656 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Kole_2025 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Kole_1380 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Kole_1746 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Kole_0509 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Kole_0107 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Kole_0871 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Kole_0959 D-Lysine 56-aminomutase alpha subunit K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3] D Kole_0958 cobalamin B12-binding domain protein K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3] D Kole_0356 dihydrodipicolinate reductase K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26] D Kole_1596 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12] D Kole_0360 D-Lysine 56-aminomutase alpha subunit K17898 oraE; D-ornithine 4,5-aminomutase subunit beta [EC:5.4.3.5] D Kole_0359 hypothetical protein K17899 oraS; D-ornithine 4,5-aminomutase subunit alpha [EC:5.4.3.5] C 00480 Glutathione metabolism [PATH:kol00480] D Kole_1227 Isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Kole_1584 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D Kole_0271 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:kol00511] D Kole_0478 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:kol00541] D Kole_0202 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Kole_0030 Phosphomannose isomerase-like protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D Kole_1022 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Kole_1760 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D Kole_1734 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Kole_1365 Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Kole_1361 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Kole_1639 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D Kole_1641 oxidoreductase domain protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D Kole_1631 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:kol00550] D Kole_1771 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Kole_0261 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Kole_1377 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Kole_1380 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Kole_1383 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Kole_0511 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Kole_0926 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Kole_1656 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Kole_1382 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Kole_0512 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Kole_1608 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Kole_1924 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Kole_1381 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Kole_1378 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Kole_0266 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Kole_0872 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Kole_0879 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:kol00552] D Kole_1924 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Kole_2045 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Kole_1580 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D Kole_0752 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:kol00543] D Kole_1345 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:kol00730] D Kole_0998 UBA/THIF-type NAD/FAD binding protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D Kole_1851 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Kole_1444 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Kole_0394 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Kole_2112 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Kole_1942 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Kole_0638 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Kole_1359 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Kole_1407 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D Kole_1881 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:kol00740] D Kole_1233 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Kole_1231 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Kole_1234 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Kole_1232 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Kole_2101 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Kole_1715 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:kol00750] D Kole_2075 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Kole_0804 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Kole_0803 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:kol00760] D Kole_0805 Quinolinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Kole_1712 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Kole_1474 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Kole_0902 5'-Nucleotidase domain protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Kole_0744 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Kole_2123 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Kole_0858 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Kole_1677 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Kole_1614 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Kole_0806 isochorismatase hydrolase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D Kole_0862 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Kole_0206 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:kol00770] D Kole_1724 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Kole_1649 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Kole_1748 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Kole_1846 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Kole_0858 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Kole_1708 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Kole_0176 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Kole_1853 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Kole_0349 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Kole_2072 amidohydrolase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Kole_1543 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:kol00780] D Kole_0973 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Kole_0050 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Kole_0968 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Kole_0396 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Kole_1726 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:kol00785] D Kole_0477 biotin/lipoate A/B protein ligase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Kole_0475 Radical SAM domain protein K09711 lipS1; lipoyl synthase D Kole_0476 Radical SAM domain protein K24689 lipS2; lipoyl synthase D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_1620 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Kole_1619 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Kole_1622 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Kole_1621 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:kol00790] D Kole_1468 protein of unknown function DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Kole_1359 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Kole_1750 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Kole_0275 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Kole_2036 FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Kole_1736 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Kole_0510 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Kole_1233 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Kole_1946 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Kole_0930 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Kole_0702 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Kole_0703 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Kole_0704 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Kole_0699 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Kole_2077 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] C 00670 One carbon pool by folate [PATH:kol00670] D Kole_2036 FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Kole_2114 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Kole_2113 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Kole_1686 Formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D Kole_1456 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Kole_0291 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)-like protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Kole_1720 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2] D Kole_0746 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Kole_1622 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Kole_0028 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:kol00860] D Kole_0641 Flavodoxin-like protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D Kole_1050 Radical SAM domain protein K22226 ahbC; Fe-coproporphyrin III synthase D Kole_0446 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Kole_0599 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Kole_0454 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Kole_0456 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Kole_0453 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D Kole_0682 Mandelate racemase/muconate lactonizing protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:kol00900] D Kole_2112 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Kole_0909 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Kole_1589 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Kole_1867 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Kole_0911 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Kole_0213 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Kole_1441 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Kole_1608 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Kole_0992 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Kole_0993 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Kole_0893 Transketolase domain protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:kol01054] D Kole_0509 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:kol00946] D Kole_1034 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Kole_0409 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:kol00332] D Kole_1419 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Kole_1418 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:kol00261] D Kole_0103 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Kole_0108 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Kole_0106 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Kole_0105 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:kol00521] D Kole_1176 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_1870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_1918 Glucose-1,6-bisphosphate synthase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Kole_2144 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Kole_0167 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Kole_1436 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Kole_0987 oxidoreductase domain protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Kole_1176 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D Kole_1870 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D Kole_0971 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Kole_0050 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Kole_0972 acyl carrier protein K02078 acpP; acyl carrier protein D Kole_1475 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:kol00999] D Kole_0285 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Kole_1034 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Kole_0409 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites D Kole_1596 alanine racemase domain protein K21898 orr; ornithine racemase [EC:5.1.1.12] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:kol00362] D Kole_1742 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Kole_1366 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Kole_1367 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:kol00627] D Kole_0583 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Kole_0597 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Kole_0596 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:kol00625] D Kole_1524 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Kole_1763 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D Kole_1763 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation D Kole_0381 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Kole_0382 thiamine pyrophosphate protein domain protein TPP-binding K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Kole_0379 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:kol00626] D Kole_1524 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:kol03020] D Kole_1838 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Kole_1837 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Kole_1874 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Kole_1847 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:kol03010] D Kole_0214 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1 D Kole_1539 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Kole_1896 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Kole_1875 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Kole_1885 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Kole_0315 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Kole_1906 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Kole_1888 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Kole_0341 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Kole_1903 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Kole_1876 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Kole_1907 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Kole_1877 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Kole_1889 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Kole_1645 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Kole_1461 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Kole_1893 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Kole_0313 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Kole_1898 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Kole_0286 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Kole_1841 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Kole_1899 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Kole_1902 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Kole_1901 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Kole_1890 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Kole_1887 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Kole_1839 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Kole_0312 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Kole_1840 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Kole_1842 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Kole_0340 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Kole_1892 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Kole_1883 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Kole_1895 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Kole_1873 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Kole_1886 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Kole_1466 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Kole_1451 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Kole_0338 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Kole_1897 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Kole_1900 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Kole_1891 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Kole_1732 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Kole_0339 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Kole_1660 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Kole_1894 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Kole_1884 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Kole_0244 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Kole_1535 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Kole_1845 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Kole_0258 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Kole_1450 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Kole_1878 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Kole_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Kole_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Kole_R0025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Kole_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Kole_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Kole_R0044 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:kol00970] D Kole_R0042 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Kole_R0004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Kole_R0038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Kole_R0013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0009 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Kole_R0028 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Kole_R0027 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Kole_R0017 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Kole_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Kole_R0055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Kole_R0001 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Kole_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Kole_R0046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Kole_R0012 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Kole_R0014 tRNA-His K14226 tRNA-His; tRNA His D Kole_R0041 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Kole_R0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Kole_R0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Kole_R0031 tRNA-Met K14230 tRNA-Met; tRNA Met D Kole_R0029 tRNA-Met K14230 tRNA-Met; tRNA Met D Kole_R0032 tRNA-Met K14230 tRNA-Met; tRNA Met D Kole_R0003 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Kole_R0011 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Kole_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Kole_R0007 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Kole_R0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Kole_R0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Kole_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Kole_R0016 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Kole_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Kole_R0052 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Kole_R0039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Kole_R0050 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Kole_R0051 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Kole_R0045 tRNA-Val K14237 tRNA-Val; tRNA Val D Kole_R0020 tRNA-Val K14237 tRNA-Val; tRNA Val D Kole_R0002 tRNA-Val K14237 tRNA-Val; tRNA Val D Kole_1714 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Kole_1950 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Kole_0326 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Kole_0325 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Kole_1920 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Kole_1606 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Kole_1514 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Kole_0211 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Kole_0209 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Kole_1826 tRNA synthetase class II (D K and N) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Kole_2109 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Kole_2108 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Kole_2089 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Kole_0854 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Kole_1713 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Kole_1196 cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D Kole_0017 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Kole_0746 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Kole_1737 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Kole_0173 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Kole_0011 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Kole_2033 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Kole_1434 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Kole_1711 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Kole_0376 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Kole_2146 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Kole_2145 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Kole_1499 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Kole_0864 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:kol03060] D Kole_1882 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Kole_1844 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Kole_1498 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Kole_1611 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Kole_1612 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Kole_1610 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Kole_0255 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Kole_1913 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Kole_1460 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Kole_R0010 ffs; SRP RNA; RNA component of signal recognitionparti cle K01983 ffs; SRP RNA D Kole_1710 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Kole_1467 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Kole_1934 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:kol04122] D Kole_1851 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Kole_0121 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Kole_0702 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Kole_0703 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Kole_0704 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Kole_1444 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Kole_1439 thiamineS protein K03154 thiS; sulfur carrier protein D Kole_0998 UBA/THIF-type NAD/FAD binding protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:kol03018] D Kole_1705 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Kole_1646 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Kole_1697 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Kole_0922 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Kole_1871 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Kole_1566 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Kole_1624 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Kole_0886 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Kole_1627 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Kole_0281 RNA chaperone Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:kol03030] D Kole_0234 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_0531 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_1932 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Kole_0890 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Kole_2018 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Kole_0895 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Kole_1908 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Kole_1868 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Kole_1515 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Kole_0342 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Kole_0314 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Kole_0857 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Kole_0226 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Kole_1852 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:kol03410] D Kole_0032 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Kole_2152 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Kole_0203 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Kole_0273 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Kole_0226 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Kole_1481 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Kole_1852 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:kol03420] D Kole_2155 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Kole_0046 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Kole_1730 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Kole_0329 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Kole_0133 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Kole_0226 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Kole_1852 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:kol03430] D Kole_2119 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Kole_1854 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Kole_0960 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Kole_1603 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Kole_0133 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Kole_1542 Exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Kole_1481 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Kole_0314 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Kole_1932 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Kole_0890 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Kole_1868 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Kole_2018 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Kole_1908 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Kole_0895 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Kole_0234 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_0531 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_1852 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:kol03440] D Kole_1481 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Kole_0314 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Kole_1564 recA protein K03553 recA; recombination protein RecA D Kole_0226 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Kole_1735 RuvA domain protein K03550 ruvA; holliday junction DNA helicase RuvA D Kole_0208 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Kole_0891 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Kole_0006 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Kole_1932 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Kole_0890 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Kole_1868 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Kole_2018 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Kole_1908 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Kole_0895 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Kole_0234 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_0531 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_1545 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:kol02010] D Kole_0700 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Kole_0701 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Kole_1985 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Kole_1984 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Kole_1983 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Kole_2154 ABC transporter, periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein D Kole_2153 binding-protein-dependent transport systems inner membrane component K02063 thiP; thiamine transport system permease protein D Kole_1394 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein D Kole_1393 binding-protein-dependent transport systems inner membrane component K10109 malF; maltose/maltodextrin transport system permease protein D Kole_1392 binding-protein-dependent transport systems inner membrane component K10110 malG; maltose/maltodextrin transport system permease protein D Kole_0287 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Kole_1219 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Kole_0869 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Kole_1171 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein D Kole_1172 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein D Kole_1173 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein D Kole_1181 extracellular solute-binding protein family 1 K17244 chiE; putative chitobiose transport system substrate-binding protein D Kole_1180 binding-protein-dependent transport systems inner membrane component K17245 chiF; putative chitobiose transport system permease protein D Kole_1179 binding-protein-dependent transport systems inner membrane component K17246 chiG; putative chitobiose transport system permease protein D Kole_0465 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Kole_1250 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Kole_1554 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Kole_0951 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Kole_1252 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Kole_1552 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Kole_0463 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Kole_0952 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Kole_0462 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Kole_1253 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Kole_1551 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Kole_0953 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Kole_1553 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Kole_1251 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Kole_0464 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Kole_0954 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Kole_2003 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein D Kole_2002 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein D Kole_2001 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein D Kole_0602 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Kole_0603 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Kole_0604 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Kole_0600 RbsD or FucU transport K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D Kole_0986 extracellular solute-binding protein family 1 K17237 inoE; inositol-phosphate transport system substrate-binding protein D Kole_0985 binding-protein-dependent transport systems inner membrane component K17238 inoF; inositol-phosphate transport system permease protein D Kole_0984 binding-protein-dependent transport systems inner membrane component K17239 inoG; inositol-phosphate transport system permease protein D Kole_0983 ABC transporter related K17240 inoK; inositol-phosphate transport system ATP-binding protein D Kole_1422 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Kole_0936 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Kole_1421 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Kole_1420 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Kole_0711 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Kole_0710 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Kole_0709 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Kole_0708 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Kole_1102 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Kole_1103 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Kole_1104 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Kole_1105 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Kole_1106 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Kole_0149 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Kole_0147 ABC-3 protein K09816 znuB; zinc transport system permease protein D Kole_0148 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Kole_0361 BioY protein K03523 bioY; biotin transport system substrate-specific component D Kole_1947 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Kole_2133 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Kole_2134 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Kole_0296 basic membrane lipoprotein K23510 rfuA; riboflavin transport system substrate-binding protein D Kole_1835 inner-membrane translocator K23511 rfuC; riboflavin transport system permease protein D Kole_1834 inner-membrane translocator K23512 rfuD; riboflavin transport system permease protein D Kole_1836 ABC transporter related K23513 rfuB; riboflavin transport system ATP-binding protein D Kole_1193 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Kole_1581 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Kole_1582 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Kole_1952 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Kole_2105 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Kole_2106 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) D Kole_0346 PfkB domain protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:kol03070] D Kole_0696 hypothetical protein K02456 gspG; general secretion pathway protein G D Kole_1611 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Kole_1612 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Kole_1844 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Kole_1498 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Kole_1882 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Kole_1610 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Kole_0255 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Kole_1913 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Kole_1710 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Kole_1460 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:kol02020] D Kole_1572 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Kole_1359 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Kole_0711 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Kole_1599 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Kole_1428 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Kole_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Kole_0916 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Kole_0915 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR D Kole_0487 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Kole_1193 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Kole_0808 hypothetical protein K11621 liaG; lia operon protein LiaG D Kole_0290 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1744 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_0597 3-oxoacid CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D Kole_0596 3-oxoacid CoA-transferase, B subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Kole_1408 sigma-54 DNA-binding domain protein K03092 rpoN; RNA polymerase sigma-54 factor D Kole_0722 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_1240 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_0117 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_1167 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_1016 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK D Kole_1593 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Kole_0012 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Kole_1361 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Kole_1584 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:kol02024] D Kole_0281 RNA chaperone Hfq K03666 hfq; host factor-I protein D Kole_1102 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Kole_1103 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Kole_1104 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Kole_1105 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Kole_1106 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Kole_1923 beta-lactamase domain protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D Kole_1231 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Kole_2046 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Kole_1511 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Kole_1550 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Kole_2047 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Kole_1510 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Kole_1549 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Kole_2048 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Kole_1509 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Kole_1548 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Kole_2049 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Kole_1513 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Kole_1547 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Kole_1512 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Kole_0737 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D Kole_0255 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D Kole_1844 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Kole_1498 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Kole_1882 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Kole_1610 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Kole_1913 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Kole_1710 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Kole_1460 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:kol02030] D Kole_1394 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein D Kole_0602 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly [PATH:kol02040] D Kole_0343 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Kole_1408 sigma-54 DNA-binding domain protein K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Kole_1705 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:kol04980] D Kole_0446 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Kole_1370 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:kol01501] D Kole_0876 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Kole_1989 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Kole_0266 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:kol01502] D Kole_0926 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Kole_1656 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Kole_1659 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Kole_1382 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Kole_0512 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Kole_1381 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Kole_1378 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:kol01503] D Kole_1997 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Kole_1599 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:kol01000] C 01001 Protein kinases [BR:kol01001] D Kole_1440 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Kole_0443 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Kole_0014 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Kole_1572 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Kole_1428 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Kole_0916 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Kole_0705 PAS/PAC sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Kole_1119 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Kole_1593 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:kol01009] D Kole_1624 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:kol01002] D Kole_1934 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Kole_1699 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Kole_0560 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D Kole_0819 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D Kole_0818 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Kole_0736 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_1537 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_0688 Glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_1185 sugar isomerase (SIS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Kole_1285 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Kole_1006 conserved hypothetical protein K14358 SCRN; secernin D Kole_1809 Abortive infection protein K07052 K07052; CAAX protease family protein D Kole_1030 Abortive infection protein K07052 K07052; CAAX protease family protein D Kole_2017 peptidase M3A and M3B thimet/oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Kole_0402 oligoendopeptidase, M3 family K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D Kole_0419 M6 family metalloprotease domain protein K09607 ina; immune inhibitor A [EC:3.4.24.-] D Kole_0735 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D Kole_1021 dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Kole_0532 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D Kole_1880 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Kole_1833 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D Kole_0645 isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D Kole_1568 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Kole_0588 peptidase M42 family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-] D Kole_1142 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Kole_0910 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Kole_0265 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D Kole_1599 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Kole_0879 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Kole_0872 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Kole_2120 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Kole_0536 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Kole_0019 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Kole_1467 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Kole_0387 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Kole_1401 Rhomboid family protein K07059 K07059; rhomboid family protein D Kole_0305 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Kole_1655 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Kole_1003 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Kole_0554 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Kole_1004 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein D Kole_0553 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein D Kole_0493 alpha-2-macroglobulin domain protein K06894 yfhM; alpha-2-macroglobulin D Kole_0263 HflC protein K04087 hflC; modulator of FtsH protease HflC D Kole_0262 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:kol01003] D Kole_0752 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Kole_1108 glycosyl transferase family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D Kole_0750 glycosyl transferase group 1 K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208] D Kole_1922 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Kole_2045 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D Kole_1218 glycosyl transferase group 1 K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:kol01005] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:kol01011] D Kole_1771 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Kole_0261 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Kole_1377 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Kole_1380 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Kole_1383 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Kole_0511 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Kole_0926 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Kole_1656 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Kole_1659 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Kole_2025 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Kole_0305 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Kole_1381 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Kole_1378 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Kole_1924 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Kole_2011 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Kole_1635 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D Kole_0266 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Kole_0872 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Kole_0879 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Kole_1997 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:kol01004] D Kole_0971 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Kole_0969 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Kole_0973 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Kole_0050 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Kole_0968 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Kole_0970 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D Kole_1536 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Kole_0216 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Kole_1443 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Kole_1111 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:kol01008] D Kole_0509 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:kol01006] D Kole_1441 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Kole_1608 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Kole_0280 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:kol01007] D Kole_1714 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Kole_1950 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Kole_1499 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Kole_0864 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Kole_1713 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Kole_1434 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Kole_0017 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Kole_0011 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Kole_1737 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Kole_0173 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Kole_2033 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Kole_0211 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Kole_0209 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Kole_1826 tRNA synthetase class II (D K and N) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Kole_0376 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Kole_2109 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Kole_2108 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Kole_0854 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Kole_1711 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Kole_2089 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Kole_1606 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Kole_1514 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Kole_2146 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Kole_2145 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Kole_1196 cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D Kole_1927 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_1492 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Kole_2126 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D Kole_0146 aminotransferase class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Kole_0097 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Kole_0102 aminotransferase class-III K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Kole_0085 aminotransferase class IV K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Kole_0349 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Kole_1760 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:kol00194] D Kole_0217 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Kole_0218 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Kole_0219 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Kole_0220 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Kole_0221 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Kole_0222 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Kole_0223 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Kole_0224 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Kole_0225 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:kol03000] D Kole_0694 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Kole_1074 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Kole_0997 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Kole_0605 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Kole_1170 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Kole_0484 transcriptional regulator, GntR family with LacI sensor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D Kole_0877 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D Kole_1987 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D Kole_1348 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D Kole_0856 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Kole_1528 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Kole_0150 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Kole_2147 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Kole_1157 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Kole_1156 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Kole_1709 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Kole_0547 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Kole_1122 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator D Kole_0716 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Kole_0295 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Kole_0815 transcriptional regulator, RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D Kole_1726 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Kole_1307 plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Kole_1558 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Kole_0827 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Kole_0608 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D Kole_1085 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Kole_0385 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Kole_0168 glycerol-3-phosphate responsive antiterminator, GlpP K02443 glpP; glycerol uptake operon antiterminator D Kole_1384 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Kole_0955 phage shock protein C, PspC K03973 pspC; phage shock protein C D Kole_0940 transcriptional regulator, DeoR family K05346 deoR; deoxyribonucleoside regulator D Kole_2031 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:kol03021] D Kole_1411 beta-lactamase domain protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] D Kole_1874 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Kole_1838 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Kole_1837 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Kole_1847 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Kole_0343 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Kole_1408 sigma-54 DNA-binding domain protein K03092 rpoN; RNA polymerase sigma-54 factor D Kole_1529 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Kole_2115 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Kole_1843 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Kole_0440 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Kole_0441 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist D Kole_0443 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Kole_1855 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Kole_2032 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Kole_1871 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:kol03019] D Kole_1411 beta-lactamase domain protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] D Kole_0546 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Kole_0892 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Kole_1566 RNA binding metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Kole_1697 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Kole_1658 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Kole_1206 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D Kole_0922 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Kole_1705 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Kole_1646 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Kole_1871 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Kole_1624 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Kole_0886 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Kole_1627 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Kole_0281 RNA chaperone Hfq K03666 hfq; host factor-I protein D Kole_2026 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:kol03011] D Kole_0214 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1 D Kole_1539 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Kole_1896 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Kole_1875 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Kole_1885 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Kole_0315 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Kole_1906 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Kole_1888 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Kole_0341 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Kole_1903 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Kole_1876 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Kole_1907 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Kole_1877 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Kole_1889 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Kole_1645 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Kole_1461 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Kole_1893 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Kole_0313 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Kole_1898 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Kole_0286 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Kole_1841 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Kole_1899 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Kole_1902 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Kole_1901 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Kole_1890 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Kole_1887 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Kole_0312 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Kole_1840 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Kole_1842 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Kole_1839 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Kole_0340 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Kole_1892 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Kole_1883 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Kole_1895 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Kole_1873 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Kole_1886 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Kole_1466 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Kole_1451 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Kole_0338 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Kole_1897 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Kole_1900 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Kole_1891 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Kole_0339 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Kole_1660 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Kole_1894 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Kole_1884 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Kole_0244 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Kole_1535 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Kole_1845 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Kole_0258 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Kole_1450 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Kole_1878 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D Kole_1732 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Kole_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Kole_R0044 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Kole_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Kole_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Kole_R0025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Kole_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:kol03009] D Kole_0892 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Kole_2107 GTP-binding protein Era K03595 era; GTPase D Kole_2122 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Kole_1529 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Kole_2115 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Kole_1843 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Kole_1480 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Kole_0048 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Kole_1944 NusB/RsmB/TIM44 K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Kole_2132 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Kole_0007 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Kole_0853 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Kole_1469 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Kole_1911 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Kole_1470 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Kole_1915 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Kole_1604 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Kole_1718 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Kole_1523 protein of unknown function Met10 K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Kole_0897 methyltransferase small K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Kole_2069 Fe-S-cluster redox enzyme-like protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Kole_1943 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Kole_1435 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Kole_0867 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Kole_1476 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Kole_1933 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Kole_1463 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Kole_1561 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Kole_0327 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Kole_0546 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Kole_1605 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D Kole_0922 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Kole_1942 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Kole_0638 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Kole_0215 small GTP-binding protein K03977 engA; GTPase D Kole_0929 GTP-binding protein HSR1-related K14540 rbgA; ribosome biogenesis GTPase A D Kole_0282 GTP-binding proten HflX K03665 hflX; GTPase D Kole_0238 GTP-binding protein HSR1-related K06948 yqeH; 30S ribosome assembly GTPase D Kole_0944 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Kole_1955 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Kole_2103 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Kole_1530 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Kole_1538 Iojap-related protein K09710 ybeB; ribosome-associated protein D Kole_1783 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Kole_1140 hypothetical protein K09889 yjgA; ribosome-associated protein D Kole_0545 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Kole_0229 Protein of unknown function DUF933 K06942 ychF; ribosome-binding ATPase D Kole_1534 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:kol03016] D Kole_0311 conserved hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Kole_1591 CBS domain containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Kole_1045 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Kole_1711 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Kole_0011 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Kole_0173 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Kole_0017 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Kole_1434 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Kole_2033 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Kole_0211 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Kole_1606 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Kole_1514 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Kole_0209 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Kole_1826 tRNA synthetase class II (D K and N) K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D Kole_2089 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Kole_0854 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Kole_1713 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Kole_1737 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Kole_0376 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Kole_2146 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Kole_2145 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Kole_1499 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Kole_0864 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Kole_1954 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Kole_2131 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Kole_0386 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Kole_0003 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Kole_1916 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Kole_2102 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Kole_1851 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Kole_0944 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Kole_0280 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Kole_2156 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Kole_1396 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Kole_0257 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Kole_R0049 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Kole_1563 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Kole_2109 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Kole_2108 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Kole_1196 cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D Kole_1714 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Kole_1950 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D Kole_2124 dihydrouridine synthase DuS K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Kole_1540 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Kole_0348 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Kole_0031 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Kole_1464 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Kole_0121 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Kole_1722 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Kole_0246 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Kole_1946 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Kole_0034 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Kole_1685 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Kole_1444 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Kole_1567 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Kole_1388 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Kole_0251 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Kole_0535 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Kole_1544 cytidyltransferase-related domain protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D Kole_1697 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Kole_1646 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:kol03012] D Kole_1403 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Kole_1449 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Kole_1165 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Kole_0868 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Kole_1707 translation elongation factor Ts K02357 tsf; elongation factor Ts D Kole_1904 translation elongation factor Tu K02358 tuf; elongation factor Tu D Kole_1905 translation elongation factor G K02355 fusA; elongation factor G D Kole_1575 translation elongation factor G K02355 fusA; elongation factor G D Kole_0841 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Kole_1609 ribosome recycling factor K02838 frr; ribosome recycling factor D Kole_0861 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Kole_1731 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Kole_1879 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Kole_2117 translation elongation factor P K02356 efp; elongation factor P D Kole_1912 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:kol03110] D Kole_2041 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Kole_0884 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Kole_0250 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Kole_1654 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Kole_0886 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Kole_1627 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Kole_1386 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Kole_1385 GrpE protein K03687 GRPE; molecular chaperone GrpE D Kole_0885 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Kole_1626 chaperonin Cpn10 K04078 groES; chaperonin GroES D Kole_1599 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Kole_1568 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Kole_0224 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Kole_0555 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)-like protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Kole_1682 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Kole_0383 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Kole_0832 Thioredoxin domain protein K03671 TXN; thioredoxin D Kole_0948 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:kol04131] D Kole_0896 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Kole_0478 glycoside hydrolase family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D Kole_2020 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Kole_0519 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Kole_1625 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Kole_0918 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:kol03032] D Kole_0330 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Kole_1356 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Kole_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Kole_1515 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Kole_0342 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Kole_0314 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Kole_1932 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Kole_0890 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Kole_1868 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Kole_1908 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Kole_0895 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Kole_0234 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_0531 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_2018 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Kole_0857 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Kole_0226 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Kole_1852 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Kole_0018 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Kole_0351 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Kole_1657 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:kol03036] D Kole_0892 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Kole_0330 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Kole_1356 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Kole_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Kole_0281 RNA chaperone Hfq K03666 hfq; host factor-I protein D Kole_0189 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Kole_0865 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Kole_0866 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Kole_0353 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Kole_1379 cell cycle protein K03588 ftsW; cell division protein FtsW D Kole_0354 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Kole_1997 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Kole_0041 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Kole_1522 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Kole_0269 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Kole_1484 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Kole_1721 cell cycle protein K05837 rodA; rod shape determining protein RodA D Kole_1396 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Kole_1469 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Kole_0031 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Kole_1958 integrase family protein K04763 xerD; integrase/recombinase XerD D Kole_1453 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning D Kole_0537 small GTP-binding protein K03978 engB; GTP-binding protein D Kole_2030 protein of unknown function DUF199 K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:kol03400] D Kole_0188 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Kole_0032 8-oxoguanine DNA glycosylase domain protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Kole_2152 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Kole_0520 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Kole_0544 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Kole_0203 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Kole_0273 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Kole_1869 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Kole_1481 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Kole_1852 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Kole_0226 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Kole_0046 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Kole_1730 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Kole_0329 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Kole_0133 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Kole_1838 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Kole_1837 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Kole_1874 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Kole_1847 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Kole_2155 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Kole_2119 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Kole_1854 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Kole_0960 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2 D Kole_1603 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Kole_1542 Exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Kole_1932 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Kole_0890 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D Kole_1868 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Kole_1908 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Kole_0895 DNA polymerase III gamma/tau subunits-like protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Kole_0234 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_0531 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Kole_2018 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Kole_0314 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Kole_1564 recA protein K03553 recA; recombination protein RecA D Kole_1735 RuvA domain protein K03550 ruvA; holliday junction DNA helicase RuvA D Kole_0208 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Kole_0891 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Kole_1545 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Kole_2042 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Kole_0006 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Kole_0259 SMC domain protein K03631 recN; DNA repair protein RecN (Recombination protein N) D Kole_0669 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Kole_0018 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Kole_0351 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Kole_1657 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Kole_0330 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Kole_1356 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Kole_1261 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Kole_0019 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Kole_1565 regulatory protein RecX K03565 recX; regulatory protein D Kole_0458 DNA polymerase IV (family X)-like protein K02347 polX; DNA polymerase (family X) D Kole_0748 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Kole_0471 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Kole_1473 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:kol03029] D Kole_1403 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Kole_1449 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Kole_1707 translation elongation factor Ts K02357 tsf; elongation factor Ts D Kole_1904 translation elongation factor Tu K02358 tuf; elongation factor Tu D Kole_1905 translation elongation factor G K02355 fusA; elongation factor G D Kole_1575 translation elongation factor G K02355 fusA; elongation factor G D Kole_2107 GTP-binding protein Era K03595 era; GTPase D Kole_1499 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Kole_0173 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Kole_0211 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Kole_1434 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Kole_0326 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Kole_0325 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Kole_1920 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Kole_0314 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Kole_0022 surface antigen variable number repeat protein K07277 SAM50; outer membrane protein insertion porin family D Kole_0886 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Kole_1385 GrpE protein K03687 GRPE; molecular chaperone GrpE D Kole_1627 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Kole_1626 chaperonin Cpn10 K04078 groES; chaperonin GroES D Kole_1386 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Kole_1851 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Kole_1453 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning D Kole_0255 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:kol02000] D Kole_2105 ABC transporter related K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D Kole_2106 ABC transporter related K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D Kole_0798 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Kole_0758 ABC transporter related K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Kole_0700 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Kole_0701 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein D Kole_1985 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Kole_1984 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Kole_1983 ABC transporter related K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Kole_2154 ABC transporter, periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein D Kole_2153 binding-protein-dependent transport systems inner membrane component K02063 thiP; thiamine transport system permease protein D Kole_1531 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Kole_1532 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Kole_1533 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Kole_1394 extracellular solute-binding protein family 1 K10108 malE; maltose/maltodextrin transport system substrate-binding protein D Kole_1393 binding-protein-dependent transport systems inner membrane component K10109 malF; maltose/maltodextrin transport system permease protein D Kole_1392 binding-protein-dependent transport systems inner membrane component K10110 malG; maltose/maltodextrin transport system permease protein D Kole_0287 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Kole_1219 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Kole_0869 ABC transporter related K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D Kole_2003 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein D Kole_2002 binding-protein-dependent transport systems inner membrane component K17316 gtsB; glucose/mannose transport system permease protein D Kole_2001 binding-protein-dependent transport systems inner membrane component K17317 gtsC; glucose/mannose transport system permease protein D Kole_1171 extracellular solute-binding protein family 1 K10236 thuE; trehalose/maltose transport system substrate-binding protein D Kole_1172 binding-protein-dependent transport systems inner membrane component K10237 thuF; trehalose/maltose transport system permease protein D Kole_1173 binding-protein-dependent transport systems inner membrane component K10238 thuG; trehalose/maltose transport system permease protein D Kole_1181 extracellular solute-binding protein family 1 K17244 chiE; putative chitobiose transport system substrate-binding protein D Kole_1180 binding-protein-dependent transport systems inner membrane component K17245 chiF; putative chitobiose transport system permease protein D Kole_1179 binding-protein-dependent transport systems inner membrane component K17246 chiG; putative chitobiose transport system permease protein D Kole_0602 periplasmic binding protein/LacI transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D Kole_0603 inner-membrane translocator K10440 rbsC; ribose transport system permease protein D Kole_0604 ABC transporter related K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D Kole_0986 extracellular solute-binding protein family 1 K17237 inoE; inositol-phosphate transport system substrate-binding protein D Kole_0985 binding-protein-dependent transport systems inner membrane component K17238 inoF; inositol-phosphate transport system permease protein D Kole_0984 binding-protein-dependent transport systems inner membrane component K17239 inoG; inositol-phosphate transport system permease protein D Kole_0983 ABC transporter related K17240 inoK; inositol-phosphate transport system ATP-binding protein D Kole_1422 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Kole_0936 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Kole_1421 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Kole_1420 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Kole_0465 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Kole_1250 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Kole_1554 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Kole_0951 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D Kole_1252 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Kole_1552 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Kole_0463 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Kole_0952 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein D Kole_0462 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Kole_1253 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Kole_1551 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Kole_0953 inner-membrane translocator K23536 nupC; general nucleoside transport system permease protein D Kole_1553 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Kole_1251 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Kole_0464 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Kole_0954 ABC transporter related K23537 nupA; general nucleoside transport system ATP-binding protein D Kole_0296 basic membrane lipoprotein K23510 rfuA; riboflavin transport system substrate-binding protein D Kole_1835 inner-membrane translocator K23511 rfuC; riboflavin transport system permease protein D Kole_1834 inner-membrane translocator K23512 rfuD; riboflavin transport system permease protein D Kole_1836 ABC transporter related K23513 rfuB; riboflavin transport system ATP-binding protein D Kole_0811 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_0693 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_1201 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_1073 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_1976 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_1222 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_0479 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_0175 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_1992 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_0875 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_0165 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_0303 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_1038 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Kole_1037 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_1072 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0681 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0938 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0276 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0692 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_2084 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0480 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0874 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_1221 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0166 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0302 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_0812 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_1974 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_1993 binding-protein-dependent transport systems inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein D Kole_1036 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0680 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0277 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0691 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0481 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0873 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_1220 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0164 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0301 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0813 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0937 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_1071 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_1203 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_1975 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D Kole_0711 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein D Kole_0710 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Kole_0709 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Kole_0708 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Kole_1102 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Kole_1103 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Kole_1104 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Kole_1105 ABC transporter related K01995 livG; branched-chain amino acid transport system ATP-binding protein D Kole_1106 ABC transporter related K01996 livF; branched-chain amino acid transport system ATP-binding protein D Kole_0080 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D Kole_0081 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein D Kole_0082 ABC transporter related K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D Kole_0123 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Kole_1671 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Kole_0124 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Kole_0126 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Kole_1672 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Kole_0125 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Kole_1673 ABC transporter related K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Kole_2046 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Kole_1511 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Kole_1550 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Kole_2047 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Kole_1510 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Kole_1549 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Kole_2048 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Kole_1509 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Kole_1548 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Kole_2049 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Kole_1513 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Kole_1547 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Kole_1512 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Kole_1602 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Kole_1601 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Kole_1600 ABC transporter related K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Kole_0149 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Kole_0147 ABC-3 protein K09816 znuB; zinc transport system permease protein D Kole_0148 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Kole_0361 BioY protein K03523 bioY; biotin transport system substrate-specific component D Kole_1947 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Kole_2133 ABC transporter related K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Kole_2134 ABC transporter related K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Kole_1952 ABC transporter related K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Kole_1193 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D Kole_0467 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein D Kole_0466 ABC transporter related K25148 berA; beta-exotoxin I transport system ATP-binding protein D Kole_1581 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein D Kole_1582 ABC transporter related K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Kole_1115 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein D Kole_1114 ABC-type uncharacterized transport system permease component-like protein K25155 evrB; viologen exporter family transport system permease protein D Kole_1116 ABC transporter related K25156 evrA; viologen exporter family transport system ATP-binding protein D Kole_0151 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_1150 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_0755 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_1517 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_0776 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_0821 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_1164 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_1342 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_1343 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_0155 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_0792 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Kole_1516 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0152 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0153 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0658 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0768 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0775 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0793 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0822 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_1149 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_1163 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_1341 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0779 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0797 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Kole_0835 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Kole_0439 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Kole_0438 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Kole_0836 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Kole_1486 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Kole_0586 ABC transporter related K09013 sufC; Fe-S cluster assembly ATP-binding protein D Kole_0754 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D Kole_0368 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Kole_1668 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D Kole_2013 major facilitator superfamily MFS_1 K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter D Kole_1236 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Kole_0043 major facilitator superfamily MFS_1 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D Kole_0132 TrkA-N domain protein K10716 kch; voltage-gated potassium channel D Kole_0200 ammonium transporter K03320 amt; ammonium transporter, Amt family D Kole_0418 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Kole_1725 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Kole_1762 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Kole_1680 CrcB protein K06199 crcB; fluoride exporter D Kole_1717 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Kole_0012 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Kole_0022 surface antigen variable number repeat protein K07277 SAM50; outer membrane protein insertion porin family D Kole_0424 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D Kole_0015 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family D Kole_1769 gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D Kole_2127 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Kole_0431 Na+/glutamate symporter-like protein K03312 gltS; glutamate:Na+ symporter, ESS family D Kole_1412 Na+/glutamate symporter-like protein K03312 gltS; glutamate:Na+ symporter, ESS family D Kole_0375 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Kole_0373 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Kole_0374 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Kole_0434 Chromate transporter K07240 chrA; chromate transporter D Kole_0435 Chromate transporter K07240 chrA; chromate transporter D Kole_1777 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D Kole_2059 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D Kole_0566 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Kole_1778 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Kole_2058 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Kole_1779 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Kole_0565 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Kole_2057 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Kole_2063 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Kole_0564 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Kole_2062 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Kole_0563 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Kole_2061 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Kole_0562 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Kole_1775 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Kole_2011 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Kole_1635 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D Kole_1398 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter D Kole_0198 protein of unknown function DUF125 transmembrane K22736 VIT; vacuolar iron transporter family protein D Kole_1379 cell cycle protein K03588 ftsW; cell division protein FtsW D Kole_0134 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Kole_1742 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Kole_1395 Conserved carboxylase region K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Kole_1368 carboxyl transferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D Kole_1366 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Kole_1367 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D Kole_0196 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Kole_0014 capsular exopolysaccharide family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Kole_0369 FeoA family protein K04758 feoA; ferrous iron transport protein A D Kole_0717 FeoA family protein K04758 feoA; ferrous iron transport protein A D Kole_0370 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Kole_0718 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Kole_0366 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:kol02044] D Kole_0696 hypothetical protein K02456 gspG; general secretion pathway protein G D Kole_1699 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Kole_0722 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_1240 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_0117 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_1167 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_0355 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Kole_1866 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Kole_0842 twitching motility protein K02669 pilT; twitching motility protein PilT D Kole_0207 protein of unknown function YGGT K02221 yggT; YggT family protein D Kole_0035 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Kole_0321 CMP/dCMP deaminase zinc-binding K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Kole_1527 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC D Kole_0749 phosphoribosyltransferase K02242 comFC; competence protein ComFC D Kole_1913 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Kole_1611 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D Kole_1844 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Kole_1612 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D Kole_1498 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Kole_1882 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Kole_1460 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Kole_1710 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Kole_1610 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Kole_0255 60 kDa inner membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:kol02042] D Kole_1717 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Kole_0611 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:kol02022] D Kole_1572 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Kole_1428 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Kole_0916 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D Kole_0915 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR D Kole_0705 PAS/PAC sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Kole_1857 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Kole_0706 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Kole_1119 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Kole_1118 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator D Kole_1016 response regulator receiver protein K11443 divK; two-component system, cell cycle response regulator DivK D Kole_1593 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:kol02035] D Kole_1593 histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Kole_0842 twitching motility protein K02669 pilT; twitching motility protein PilT D Kole_0722 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_1240 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_0117 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_1167 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Kole_0355 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Kole_1866 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Kole_1699 peptidase A24A domain protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:kol04812] D Kole_1859 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein D Kole_0269 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Kole_1484 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Kole_0354 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Kole_0353 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Kole_0041 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Kole_1522 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD C 04147 Exosome [BR:kol04147] D Kole_1705 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Kole_2020 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Kole_0995 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Kole_2021 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Kole_1625 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Kole_0918 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Kole_1121 Peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Kole_1627 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Kole_0886 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Kole_0178 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Kole_1904 translation elongation factor Tu K02358 tuf; elongation factor Tu D Kole_2131 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Kole_0912 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D Kole_0598 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Kole_1881 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Kole_0179 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Kole_0093 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Kole_0092 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Kole_2072 amidohydrolase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D Kole_0950 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D Kole_0534 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Kole_0290 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1744 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Kole_1359 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Kole_0291 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)-like protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Kole_1390 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Kole_1999 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Kole_1402 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Kole_0297 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Kole_2022 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Kole_0519 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:kol02048] D Kole_0669 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Kole_0661 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Kole_0668 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Kole_0671 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Kole_0670 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Kole_0488 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Kole_0675 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Kole_0674 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1 D Kole_0673 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2 D Kole_0672 CRISPR-associated protein Cas5, Hmari subtype K19116 cas5h; CRISPR-associated protein Cas5h D Kole_0667 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1 D Kole_1270 protein of unknown function DUF324 K19076 cmr2; CRISPR-associated protein Cmr2 D Kole_0666 protein of unknown function DUF324 K19076 cmr2; CRISPR-associated protein Cmr2 D Kole_0664 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4 D Kole_1268 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4 D Kole_1971 conserved hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Kole_0116 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D Kole_0061 Type III site-specific deoxyribonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D Kole_0062 DNA methylase N-4/N-6 domain protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Kole_1813 McrBC 5-methylcytosine restriction system component-like protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D Kole_1306 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Kole_1257 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D Kole_1060 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Kole_0955 phage shock protein C, PspC K03973 pspC; phage shock protein C D Kole_1308 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D Kole_1307 plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D Kole_0354 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Kole_0269 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Kole_1484 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Kole_1851 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:kol01504] D Kole_1428 histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:kol00536] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:kol00537] D Kole_1359 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:kol03100] D Kole_R0042 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Kole_R0004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Kole_R0038 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Kole_R0013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Kole_R0009 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Kole_R0028 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Kole_R0027 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Kole_R0017 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Kole_R0022 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Kole_R0055 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Kole_R0001 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Kole_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Kole_R0046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Kole_R0012 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Kole_R0014 tRNA-His K14226 tRNA-His; tRNA His D Kole_R0041 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Kole_R0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0033 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Kole_R0048 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Kole_R0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Kole_R0031 tRNA-Met K14230 tRNA-Met; tRNA Met D Kole_R0029 tRNA-Met K14230 tRNA-Met; tRNA Met D Kole_R0032 tRNA-Met K14230 tRNA-Met; tRNA Met D Kole_R0003 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Kole_R0011 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Kole_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Kole_R0007 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Kole_R0035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Kole_R0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Kole_R0005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Kole_R0016 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Kole_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Kole_R0052 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Kole_R0039 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Kole_R0050 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Kole_R0051 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Kole_R0045 tRNA-Val K14237 tRNA-Val; tRNA Val D Kole_R0020 tRNA-Val K14237 tRNA-Val; tRNA Val D Kole_R0002 tRNA-Val K14237 tRNA-Val; tRNA Val D Kole_R0024 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Kole_R0040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Kole_R0025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Kole_R0043 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Kole_R0026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Kole_R0044 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Kole_R0010 ffs; SRP RNA; RNA component of signal recognitionparti cle K01983 ffs; SRP RNA D Kole_R0049 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA D Kole_R0006 ssrA; tmRNA as predicted by Rfam (RF00023), score 187.00 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Kole_2076 (2Fe-2S)-binding domain protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D Kole_0924 NAD/NADP octopine/nopaline dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28] D Kole_1249 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Kole_0181 NADP-reducing hydrogenase, subunit B K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3] D Kole_0184 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3] D Kole_0172 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3] D Kole_0568 NADH-ubiquinone oxidoreductase chain 49kDa K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2] D Kole_0570 NADH ubiquinone oxidoreductase 20 kDa subunit K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2] D Kole_2139 Desulfoferrodoxin ferrous iron-binding region K05919 dfx; superoxide reductase [EC:1.15.1.2] D Kole_0144 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2] D Kole_1827 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Kole_1694 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Kole_0529 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Kole_1772 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Kole_1001 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Kole_0725 Coproporphyrinogen dehydrogenase K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350] D Kole_1814 GCN5-related N-acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D Kole_0357 hypothetical protein K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263] D Kole_0358 Pyridoxal-5'-phosphate-dependent protein beta subunit K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263] D Kole_2143 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Kole_0814 glycosyl transferase family 2 K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268] D Kole_0712 glycosidase PH1107-related K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D Kole_1939 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Kole_1693 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Kole_2110 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18] D Kole_0140 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Kole_1245 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Kole_1043 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Kole_1311 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Kole_1336 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Kole_1112 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65] D Kole_2043 protein of unknown function DUF147 K07067 disA; diadenylate cyclase [EC:2.7.7.85] D Kole_1618 alpha/beta hydrolase fold protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D Kole_0199 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Kole_0013 capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D Kole_2140 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Kole_0237 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-] D Kole_0849 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D Kole_1782 metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D Kole_0228 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Kole_0136 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D Kole_1977 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D Kole_0745 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Kole_2066 amidohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D Kole_2090 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D Kole_0426 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Kole_1594 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Kole_1409 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Kole_2141 phosphoadenosine phosphosulfate reductase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Kole_0904 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Kole_0903 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Kole_0908 Fe-S cluster domain protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] C 99981 Carbohydrate metabolism D Kole_1246 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Kole_1925 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D Kole_2170 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 fer; ferredoxin D Kole_0905 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Kole_0906 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Kole_0907 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Kole_0561 4Fe-4S ferredoxin iron-sulfur binding domain protein K12143 hyfH; hydrogenase-4 component H D Kole_1490 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins D Kole_2060 putative monovalent cation/H+ antiporter subunit B K14113 ehbD; energy-converting hydrogenase B subunit D D Kole_0413 4Fe-4S ferredoxin iron-sulfur binding domain protein K02574 napH; ferredoxin-type protein NapH C 99983 Lipid metabolism D Kole_1832 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Kole_0826 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Kole_1780 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Kole_2065 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit D Kole_0433 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Kole_0816 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Kole_0751 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D Kole_1101 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D Kole_1110 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism D Kole_0508 Poly(3-hydroxybutyrate) depolymerase-like protein K03932 lpqC; polyhydroxybutyrate depolymerase C 99999 Others D Kole_1260 metallophosphoesterase K22390 ACP7; acid phosphatase type 7 B B 09192 Unclassified: genetic information processing C 99973 Transcription D Kole_2064 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Kole_0109 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Kole_1491 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Kole_0917 RNA binding S1 domain protein K06959 tex; protein Tex D Kole_1849 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D Kole_0243 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D Kole_1938 trigger factor K03545 tig; trigger factor D Kole_1729 SsrA-binding protein K03664 smpB; SsrA-binding protein D Kole_0558 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Kole_0557 hydrogenase formation HypD protein K04654 hypD; hydrogenase expression/formation protein HypD D Kole_0556 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Kole_0559 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Kole_0393 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Kole_1452 OsmC family protein K07397 yhfA; putative redox protein D Kole_2078 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Kole_0644 Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D Kole_0056 hypothetical protein K07454 K07454; putative restriction endonuclease D Kole_1767 ribonuclease H K06993 K06993; ribonuclease H-related protein D Kole_0848 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Kole_1389 HhH-GPD family protein K07457 K07457; endonuclease III related protein D Kole_1919 protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Kole_0139 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Kole_1653 DNA protecting protein DprA K04096 smf; DNA processing protein D Kole_0201 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Kole_1786 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_1237 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_1373 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_0114 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_0332 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_0523 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_0627 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_0767 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_0785 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_0071 transposase IS3/IS911 family protein K07483 K07483; transposase D Kole_1275 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase D Kole_1264 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase D Kole_1137 transposase mutator type K07493 K07493; putative transposase D Kole_1375 transposase mutator type K07493 K07493; putative transposase D Kole_0100 transposase mutator type K07493 K07493; putative transposase D Kole_0765 transposase mutator type K07493 K07493; putative transposase D Kole_1044 transposase mutator type K07493 K07493; putative transposase D Kole_1141 transposase mutator type K07493 K07493; putative transposase D Kole_0060 transposase K07493 K07493; putative transposase D Kole_0628 Integrase catalytic region K07497 K07497; putative transposase D Kole_0766 Integrase catalytic region K07497 K07497; putative transposase D Kole_1787 Integrase catalytic region K07497 K07497; putative transposase D Kole_1238 Integrase catalytic region K07497 K07497; putative transposase D Kole_0333 Integrase catalytic region K07497 K07497; putative transposase D Kole_0784 Integrase catalytic region K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Kole_2019 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Kole_0408 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Kole_0888 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Kole_1776 hypothetical protein K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B C 99978 Cell growth D Kole_0254 single-stranded nucleic acid binding R3H domain protein K06346 jag; spoIIIJ-associated protein D Kole_0336 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S D Kole_1739 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S C 99993 Cell motility C 99995 Signaling proteins D Kole_1117 carbon starvation protein CstA K06200 cstA; carbon starvation protein D Kole_1781 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Kole_0235 PhoH family protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D Kole_1953 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein C 99994 Others D Kole_0205 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Kole_0707 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D Kole_1960 Patatin K07001 K07001; NTE family protein D Kole_0928 Lysophospholipase K07001 K07001; NTE family protein D Kole_2104 Patatin K07001 K07001; NTE family protein D Kole_0406 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily D Kole_1487 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D Kole_1143 LemA family protein K03744 lemA; LemA protein D Kole_0400 conserved hypothetical protein K03095 sprL; SprT-like protein D Kole_0119 protein of unknown function DUF202 K00389 yidH; putative membrane protein D Kole_1485 protein of unknown function DUF368 K08974 K08974; putative membrane protein D Kole_1213 conserved hypothetical protein K08982 K08982; putative membrane protein D Kole_1214 conserved hypothetical protein K08982 K08982; putative membrane protein C 99997 Function unknown D Kole_0761 Radical SAM domain protein K06871 K06871; uncharacterized protein D Kole_0769 Radical SAM domain protein K06871 K06871; uncharacterized protein D Kole_0770 Radical SAM domain protein K06871 K06871; uncharacterized protein D Kole_1300 ATPase K06921 K06921; uncharacterized protein D Kole_1301 ATPase K06921 K06921; uncharacterized protein D Kole_0490 ATPase K06921 K06921; uncharacterized protein D Kole_2008 ATPase K06921 K06921; uncharacterized protein D Kole_1317 ATPase K06921 K06921; uncharacterized protein D Kole_2012 protein of unknown function DUF296 K06934 K06934; uncharacterized protein D Kole_0743 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Kole_1462 KH, type 1 K06960 K06960; uncharacterized protein D Kole_0161 photosystem I assembly BtpA K06971 K06971; uncharacterized protein D Kole_1945 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein D Kole_0390 exporter of the RND superfamily protein-like protein K07003 K07003; uncharacterized protein D Kole_0587 SufBD protein K07033 K07033; uncharacterized protein D Kole_1313 PilT protein domain protein K07063 K07063; uncharacterized protein D Kole_0233 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein D Kole_0548 permease K07089 K07089; uncharacterized protein D Kole_1956 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Kole_1937 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Kole_1406 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Kole_0947 metallophosphoesterase K07098 K07098; uncharacterized protein D Kole_0042 3H domain protein K07105 K07105; uncharacterized protein D Kole_1816 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein D Kole_2006 ATPase K07133 K07133; uncharacterized protein D Kole_0074 AAA ATPase K07133 K07133; uncharacterized protein D Kole_0231 conserved hypothetical protein K07133 K07133; uncharacterized protein D Kole_0079 AAA ATPase K07133 K07133; uncharacterized protein D Kole_0073 conserved hypothetical protein K07133 K07133; uncharacterized protein D Kole_1259 ATPase (AAA+ superfamily)-like protein K07133 K07133; uncharacterized protein D Kole_0069 AAA ATPase K07133 K07133; uncharacterized protein D Kole_1081 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 K07138; uncharacterized protein D Kole_1752 conserved hypothetical protein K07139 K07139; uncharacterized protein D Kole_2135 protein of unknown function DUF554 K07150 K07150; uncharacterized protein D Kole_0256 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Kole_1442 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D Kole_0328 protein of unknown function DUF501 K09009 K09009; uncharacterized protein D Kole_2034 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D Kole_0008 protein of unknown function DUF82 K09122 K09122; uncharacterized protein D Kole_0044 putative cytoplasmic protein K09126 K09126; uncharacterized protein D Kole_1205 protein of unknown function DUF401 K09133 K09133; uncharacterized protein D Kole_1681 protein of unknown function DUF190 K09137 K09137; uncharacterized protein D Kole_2085 protein of unknown function DUF364 K09138 K09138; uncharacterized protein D Kole_1695 AMMECR1 domain protein K09141 K09141; uncharacterized protein D Kole_1155 Hemerythrin HHE cation binding domain protein K09155 K09155; uncharacterized protein D Kole_1577 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D Kole_0067 conserved hypothetical protein K09805 K09805; uncharacterized protein D Kole_0494 protein of unknown function DUF1175 K09934 K09934; uncharacterized protein D Kole_0377 conserved hypothetical protein K09942 K09942; uncharacterized protein D Kole_0539 protein of unknown function DUF47 K07220 K07220; uncharacterized protein D Kole_0887 protein of unknown function DUF47 K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024