+E Transcription factors KO
#
Transcription Factors - Klebsiella pneumoniae subsp. pneumoniae HS11286
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D KPHS_34490 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D KPHS_07760 DNA-binding transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D KPHS_06270 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D KPHS_00670 rhaRS operon positive regulator K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D KPHS_00660 transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D KPHS_21330 DNA-binding transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D KPHS_38500 transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D KPHS_34650 AraC-type transcriptional regulator K05372 ybtA; AraC family transcriptional regulator
D KPHS_29750 regulatory protein K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KPHS_03020 DNA-binding transcriptional regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KPHS_25470 DNA-binding transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KPHS_07040 right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KPHS_02870 hypothetical protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D KPHS_13890 putative regulatory protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D KPHS_23630 DNA-binding transcriptional activator FeaR K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D KPHS_06710 putative AraC-type regulatory protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D KPHS_51970 putative AraC-type regulatory protein K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D KPHS_03470 DNA-binding transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D KPHS_20580 putative ARAC-type regulatory protein K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D KPHS_45650 hypothetical protein K13652 K13652; AraC family transcriptional regulator
D KPHS_29150 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D KPHS_29140 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D KPHS_51580 putative methylated-DNA-[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D KPHS_36990 O6-methylguanine-DNA methyltransferase, transcription activator/repressor K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D KPHS_25330 transcriptional activator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
D KPHS_14220 glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KPHS_21670 putative LysR family regulatory protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KPHS_35110 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KPHS_42400 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KPHS_01190 transcriptional activator protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D KPHS_07270 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D KPHS_01030 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D KPHS_44150 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D KPHS_07970 leucine transcriptional activator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D KPHS_33030 DNA-binding transcriptional activator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D KPHS_38020 putative LysR family regulatory protein K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D KPHS_21760 transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D KPHS_34580 transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D KPHS_22150 putative LysR family regulatory protein K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D KPHS_52510 DNA-binding transcriptional regulator DsdC K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D KPHS_24640 LysR family regulatory protein K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D KPHS_24430 putative DNA-binding transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D KPHS_18900 putative LysR-family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D KPHS_30300 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D KPHS_52200 putative LysR-family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D KPHS_20670 putative LysR-family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D KPHS_23280 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D KPHS_34590 nitrogen assimilation transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D KPHS_32900 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D KPHS_47830 putative LysR-family transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D KPHS_01100 transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
C DeoR family
D KPHS_17070 DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D KPHS_49410 DNA-binding transcriptional repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D KPHS_23460 DeoR transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D KPHS_46890 putative DEOR-type transcriptional regulator K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D KPHS_26430 DeoR transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D KPHS_42370 DNA-binding transcriptional activator FucR K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D KPHS_26460 DeoR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D KPHS_41130 DNA-binding transcriptional repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D KPHS_04310 transcriptional repressor UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
C LacI family
D KPHS_11780 lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D KPHS_25290 lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D KPHS_50920 putative xyl operon regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KPHS_43110 DNA-binding transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KPHS_00120 ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KPHS_00540 galETK operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KPHS_26760 periplasmic binding protein/LacI transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KPHS_27470 putative periplasmic binding protein/LacI transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KPHS_36520 DNA-binding transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KPHS_13170 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KPHS_50700 putative transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D KPHS_00810 DNA-binding transcriptional dual regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D KPHS_08000 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D KPHS_36050 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D KPHS_13230 putative LacI family regulatory protein K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D KPHS_05000 trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D KPHS_41230 ascBF operon repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D KPHS_29780 DNA-binding transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D KPHS_49550 gluconate (gnt) operon regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D KPHS_24170 DNA-binding transcriptional repressor MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D KPHS_26240 putative transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D KPHS_52600 GntR family transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D KPHS_16820 putative transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D KPHS_03430 putative transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D KPHS_16200 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D KPHS_33230 fatty acid metabolism regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D KPHS_08370 transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D KPHS_43130 putative regulatory protein, GntR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D KPHS_46550 DNA-binding transcriptional repressor ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D KPHS_51080 DNA-binding transcriptional repressor LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D KPHS_52710 galactonate utilization transcriptional repressor K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D KPHS_40750 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D KPHS_49800 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D KPHS_11820 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D KPHS_14010 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D KPHS_09790 DNA-binding transcriptional regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D KPHS_25010 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D KPHS_06520 GntR family transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
C TetR/AcrR family
D KPHS_p300640 tetracycline repressor protein class G K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D KPHS_14170 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D KPHS_11900 DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D KPHS_51440 nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator
D KPHS_19150 transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D KPHS_29690 putative transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D KPHS_34990 putative regulatory protein TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D KPHS_31320 hypothetical protein K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D KPHS_48250 DNA-binding transcriptional regulator EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D KPHS_23230 putative regulatory protein TetR K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D KPHS_19910 putative TetR/AcrR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D KPHS_01050 fatty acid biosynthesis regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D KPHS_16510 putative DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D KPHS_17120 putative DEOR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D KPHS_00020 DNA-binding transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D KPHS_18000 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KPHS_32040 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KPHS_18410 regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KPHS_11520 putative LRP-like transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D KPHS_34350 LuxR/UhpA-family transcriptional activator for cell division K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D KPHS_10260 putative regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D KPHS_13630 LuxR family transcriptional regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D KPHS_34420 positive regulator for ctr capsule biosynthesis, positive transcription factor K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D KPHS_44520 DNA-binding transcriptional regulator CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D KPHS_06730 2-component transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D KPHS_49400 transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D KPHS_25480 DNA-binding transcriptional repressor MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D KPHS_23890 putative regulatory protein MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D KPHS_29610 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D KPHS_06060 hypothetical protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D KPHS_40870 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D KPHS_41740 putative transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
C MerR family
D KPHS_p200220 putative transcriptional regulator MerR K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D KPHS_p200280 HTH-type transcriptional regulator merD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D KPHS_12130 copper responsive transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D KPHS_48410 zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D KPHS_03030 redox-sensing activator of soxS K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D KPHS_05780 MerR family transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D KPHS_16100 putative regulatory protein MerR K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D KPHS_15380 ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D KPHS_02700 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D KPHS_02320 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D KPHS_28460 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D KPHS_24450 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D KPHS_11280 regulatory protein, IclR K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D KPHS_31060 DNA-binding transcriptional activator MhpR K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D KPHS_33590 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D KPHS_48940 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D KPHS_24370 fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D KPHS_39340 DNA-binding transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D KPHS_04240 transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D KPHS_43730 arsenical resistance transcriptional repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D KPHS_p300510 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D KPHS_29120 putative regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D KPHS_16790 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D KPHS_33890 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D KPHS_04930 hypothetical protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D KPHS_01920 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D KPHS_48020 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D KPHS_07010 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D KPHS_47370 maltose metabolism regulator K07724 ner; Ner family transcriptional regulator
D KPHS_44810 transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator
D KPHS_44850 transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator
D KPHS_p301430 Ner-like protein K07724 ner; Ner family transcriptional regulator
D KPHS_07820 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D KPHS_06980 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D KPHS_18940 hypothetical protein K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D KPHS_26010 DNA-binding transcriptional regulator HipB K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D KPHS_06550 sigma-54 dependent transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D KPHS_40630 putative Fis-type transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D KPHS_41150 anaerobic nitric oxide reductase transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D KPHS_41420 formate hydrogen-lyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D KPHS_09110 carbohydrate diacid transcriptional activator CdaR K02647 cdaR; carbohydrate diacid regulator
D KPHS_15990 DNA-binding transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D KPHS_28640 hypothetical protein K07726 K07726; putative transcriptional regulator
D KPHS_50770 putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D KPHS_52380 putative helix-turn-helix protein K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D KPHS_50100 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D KPHS_00850 transcriptional repressor for methionine biosynthesis K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D KPHS_19180 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D KPHS_04880 bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D KPHS_36420 putative transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
C Others
D KPHS_29310 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D KPHS_11660 hypothetical protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D KPHS_11370 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D KPHS_p201300 DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KPHS_p201580 plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KPHS_p300920 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KPHS_p300250 transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KPHS_09920 transcriptional antiterminator of glycerol uptake operon K02443 glpP; glycerol uptake operon antiterminator
D KPHS_01810 transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D KPHS_47760 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D KPHS_15300 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D KPHS_24850 putative NAGC-like transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene
D KPHS_51040 mannitol repressor protein K02562 mtlR; mannitol operon repressor
D KPHS_27520 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D KPHS_26710 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D KPHS_22170 DNA-binding transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D KPHS_13070 transcriptional activator of cad operon K03765 cadC; transcriptional activator of cad operon
D KPHS_38850 transcriptional regulation of gcv operon K03567 gcvR; glycine cleavage system transcriptional repressor
D KPHS_23800 transcriptional repressor for phenylacetic acid degradation K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D KPHS_22080 phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D KPHS_22110 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D KPHS_46410 putative SorC-family transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor
D KPHS_46240 glycerol metabolism operon regulatory protein K05880 dhaR; transcriptional activator for dhaKLM operon
D KPHS_14910 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D KPHS_10060 hypothetical protein K07733 alpA; prophage regulatory protein
D KPHS_05490 phage DNA binding protein K07733 alpA; prophage regulatory protein
D KPHS_48220 phage transcriptional regulator AlpA K07733 alpA; prophage regulatory protein
D KPHS_44500 hypothetical protein K07735 algH; putative transcriptional regulator
D KPHS_08720 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D KPHS_11050 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D KPHS_09780 DNA-binding transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
D KPHS_08010 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0