+E Transcription factors KO
#
Transcription Factors - Labrenzia sp. THAF35
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D FIU93_22865 hhaIM; Modification methylase HhaI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D FIU93_12955 adaA; Bifunctional transcriptional activator/DNA repair enzyme AdaA K13652 K13652; AraC family transcriptional regulator
D FIU93_24440 rob; Right origin-binding protein K13652 K13652; AraC family transcriptional regulator
D FIU93_30930 tetD2; Transposon Tn10 TetD protein K07506 K07506; AraC family transcriptional regulator
D FIU93_05755 ada3; Bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D FIU93_01420 ada1; Bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D FIU93_02630 ada2; Bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D FIU93_14500 cdhR5; HTH-type transcriptional regulator CdhR K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D FIU93_14345 cdhR4; HTH-type transcriptional regulator CdhR K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D FIU93_00285 cdhR1; HTH-type transcriptional regulator CdhR K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D FIU93_04275 cdhR2; HTH-type transcriptional regulator CdhR K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D FIU93_24310 cdhR8; HTH-type transcriptional regulator CdhR K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
C LysR family
D FIU93_05155 gcvA4; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_28545 gcvA12; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_24140 gcvA9; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_29065 gcvA13; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_01980 gcvA1; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_27790 gcvA11; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_16670 gcvA7; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_11685 gcvA5; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_22435 gcvA8; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_25075 gcvA10; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_04545 gcvA3; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_02515 gcvA2; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_15175 gcvA6; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D FIU93_07110 cynR3; HTH-type transcriptional regulator CynR K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D FIU93_04880 gbpR1; HTH-type transcriptional regulator GbpR K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D FIU93_26415 benM2; HTH-type transcriptional regulator BenM K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D FIU93_09385 nhaR; Transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D FIU93_26575 oxyR3; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D FIU93_23515 oxyR2; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D FIU93_13925 dmlR14; HTH-type transcriptional regulator DmlR K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D FIU93_13970 cysL1; HTH-type transcriptional regulator CysL K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D FIU93_26170 ampR; HTH-type transcriptional activator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D FIU93_09210 dmlR9; HTH-type transcriptional regulator DmlR K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D FIU93_16080 gltC5; HTH-type transcriptional regulator GltC K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D FIU93_13920 yjiE; HTH-type transcriptional regulator YjiE K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D FIU93_31390 cysL4; HTH-type transcriptional regulator CysL K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D FIU93_23680 cysL3; HTH-type transcriptional regulator CysL K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D FIU93_18165 cysL2; HTH-type transcriptional regulator CysL K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D FIU93_10990 glpR2; Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D FIU93_10615 glpR1; Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
C LacI family
D FIU93_01790 ccpA1; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_08840 rafR1; HTH-type transcriptional regulator RafR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_08890 ccpA3; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_11900 ccpA6; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_30440 cytR6; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_09635 ccpA4; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_10940 rafR2; HTH-type transcriptional regulator RafR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_25260 rbsR1; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_11270 cytR4; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_26020 lac repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D FIU93_10010 cytR3; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D FIU93_26755 cytR5; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D FIU93_04795 cytR1; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D FIU93_26270 gntR; HTH-type transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
C GntR family
D FIU93_07430 phnF; putative transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D FIU93_11665 yurK; putative HTH-type transcriptional regulator YurK K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D FIU93_21460 yvoA1; HTH-type transcriptional repressor YvoA K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D FIU93_24975 yvoA2; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator
D FIU93_01155 pdhR1; Pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D FIU93_12655 pdhR2; Pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D FIU93_06710 lldR3; Putative L-lactate dehydrogenase operon regulatory protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D FIU93_27665 lutR3; HTH-type transcriptional regulator LutR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D FIU93_05000 lldR2; Putative L-lactate dehydrogenase operon regulatory protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D FIU93_18270 lldR4; Putative L-lactate dehydrogenase operon regulatory protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D FIU93_09525 ydfH5; putative HTH-type transcriptional regulator YdfH K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D FIU93_28815 lutR4; HTH-type transcriptional regulator LutR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D FIU93_25355 gabR3; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D FIU93_09245 gabR1; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D FIU93_14755 gabR2; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D FIU93_27340 ydfH15; putative HTH-type transcriptional regulator YdfH K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
C TetR/AcrR family
D FIU93_01735 betI1; HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D FIU93_14265 betI3; HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D FIU93_20180 rutR; HTH-type transcriptional regulator RutR K09017 rutR; TetR/AcrR family transcriptional regulator
D FIU93_08320 icaR; Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D FIU93_09405 betI2; HTH-type transcriptional regulator BetI K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D FIU93_23345 comR4; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_26430 comR6; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_18850 yxaF; putative HTH-type transcriptional regulator YxaF K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_29200 DNA-binding transcriptional regulator EnvR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_13515 acuR1; Transcriptional regulator AcuR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_13735 acuR2; Transcriptional regulator AcuR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_17165 comR2; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_25035 ttgR; HTH-type transcriptional regulator TtgR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_15055 DNA-binding transcriptional repressor AcrR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D FIU93_21625 comR3; HTH-type transcriptional repressor ComR K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
C Lrp/AsnC family
D FIU93_18065 lrpC; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FIU93_02370 lrp1; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FIU93_15265 lrp5; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FIU93_24365 lrp9; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FIU93_28375 lrp13; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FIU93_25420 lrp11; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FIU93_25430 lrp12; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FIU93_15405 lrp6; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D FIU93_20660 lrp7; Leucine-responsive regulatory protein K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D FIU93_24955 lrp10; Leucine-responsive regulatory protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D FIU93_22495 lrp8; Leucine-responsive regulatory protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D FIU93_17225 vjbR; HTH-type quorum sensing-dependent transcriptional regulator VjbR K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
C MarR family
D FIU93_08280 slyA1; Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D FIU93_30225 ohrR7; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FIU93_16505 ohrR3; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FIU93_18795 ohrR5; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FIU93_07170 ohrR1; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FIU93_30110 ohrR6; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FIU93_09810 slyA2; Transcriptional regulator SlyA K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D FIU93_12495 MarR family protein K25883 expG; MarR family transcriptional regulator, exopolysaccharide II synthesis transcriptional activator
C MerR family
D FIU93_31205 merR3; Mercuric resistance operon regulatory protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D FIU93_27305 hmrR; HTH-type transcriptional regulator HmrR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D FIU93_02025 nolA; Nodulation protein NolA K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D FIU93_25705 soxR2; Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
C Fur family
D FIU93_03985 fur1; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D FIU93_23985 zur; Zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D FIU93_05840 fur2; Ferric uptake regulation protein K09826 irr; Fur family transcriptional regulator, iron response regulator
C IclR family
D FIU93_01330 iclR1; Acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D FIU93_02005 pcaR1; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D FIU93_07010 pcaR2; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D FIU93_11135 kdgR1; Transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D FIU93_01880 crp2; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D FIU93_01040 crp1; cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D FIU93_27815 fixK2; Nitrogen fixation regulation protein FixK K15861 fixK; CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
D FIU93_29235 crp3; cAMP receptor protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
C Rrf2 family
D FIU93_01035 nsrR1; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D FIU93_30890 nsrR3; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D FIU93_01785 nsrR2; HTH-type transcriptional repressor NsrR K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator
C ArsR family
D FIU93_14715 Helix-turn-helix domain protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D FIU93_08560 sdpR2; Transcriptional repressor SdpR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D FIU93_10745 Helix-turn-helix domain protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D FIU93_13835 Helix-turn-helix domain protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D FIU93_24075 smtB2; HTH-type transcriptional repressor SmtB K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D FIU93_24135 bigR2; Biofilm growth-associated repressor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
C XRE family
D FIU93_09775 Helix-turn-helix domain protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
C PadR family
C Other families
D FIU93_31580 mntR2; Transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D FIU93_31140 mntR1; Transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D FIU93_31025 rpiR2; HTH-type transcriptional regulator RpiR K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D FIU93_03210 ybbH1; putative HTH-type transcriptional regulator YbbH K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D FIU93_11370 mecI; Methicillin resistance regulatory protein MecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D FIU93_19400 birA3; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D FIU93_28335 hypothetical protein K07724 ner; Ner family transcriptional regulator
D FIU93_13170 mopA; Molybdenum-pterin-binding protein MopA K02019 modE; molybdate transport system regulatory protein
D FIU93_17250 Helix-turn-helix protein K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
D FIU93_02365 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D FIU93_29365 yccM; Putative electron transport protein YccM K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D FIU93_08180 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D FIU93_31285 spo0C4; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FIU93_31335 parB2; Chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FIU93_29845 spo0C2; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FIU93_06815 spo0C1; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FIU93_05945 parB1; Chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FIU93_28320 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FIU93_30660 spo0C3; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D FIU93_07290 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D FIU93_05635 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D FIU93_20940 tenA2; Thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D FIU93_08530 tenA1; Thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D FIU93_20745 paaX; Transcriptional repressor PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D FIU93_29180 rnk1; Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D FIU93_29185 rnk2; Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D FIU93_00680 hypothetical protein K07735 algH; putative transcriptional regulator
D FIU93_20555 dksA2; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D FIU93_15895 dksA1; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
D FIU93_24690 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D FIU93_14800 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
D FIU93_20915 Sel1 repeat protein K25885 exoR; exopolysaccharide production negative regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0