+D GENES KO
#
KEGG Orthology (KO) - Lysobacter avium
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lavi00010]
D INQ42_06570 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D INQ42_02995 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D INQ42_00125 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D INQ42_03410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D INQ42_07985 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D INQ42_03335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D INQ42_03380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D INQ42_00900 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D INQ42_03775 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D INQ42_03390 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D INQ42_06685 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D INQ42_11225 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D INQ42_11030 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_02085 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D INQ42_11045 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D INQ42_01215 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D INQ42_06565 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D INQ42_00815 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D INQ42_03580 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:lavi00020]
D INQ42_03210 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D INQ42_02720 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D INQ42_06355 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D INQ42_12750 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D INQ42_09395 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D INQ42_07445 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D INQ42_07450 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_02885 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D INQ42_02880 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D INQ42_06785 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D INQ42_07810 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D INQ42_07805 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D INQ42_07820 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D INQ42_07815 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D INQ42_05870 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D INQ42_07425 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D INQ42_02715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D INQ42_03580 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D INQ42_11225 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D INQ42_11030 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:lavi00030]
D INQ42_06570 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D INQ42_06580 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D INQ42_00490 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D INQ42_06550 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D INQ42_01765 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D INQ42_03285 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D INQ42_06560 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D INQ42_06575 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D INQ42_03090 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D INQ42_11910 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D INQ42_06565 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D INQ42_00815 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D INQ42_02450 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D INQ42_01145 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D INQ42_05670 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D INQ42_03410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D INQ42_00125 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D INQ42_02995 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:lavi00040]
D INQ42_07385 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D INQ42_06255 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D INQ42_01765 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:lavi00051]
D INQ42_10565 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D INQ42_00815 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D INQ42_02995 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D INQ42_00125 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D INQ42_03410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D INQ42_07985 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D INQ42_03945 PTS fructose IIA subunit family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:lavi00052]
D INQ42_08285 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D INQ42_06255 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D INQ42_06565 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D INQ42_00815 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D INQ42_02995 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:lavi00053]
D INQ42_07385 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D INQ42_04400 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:lavi00500]
D INQ42_06255 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D INQ42_06565 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D INQ42_00815 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D INQ42_06570 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lavi00520]
D INQ42_09050 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D INQ42_10960 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D INQ42_07995 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D INQ42_10965 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D INQ42_00845 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D INQ42_05000 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D INQ42_04050 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D INQ42_04045 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D INQ42_04005 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D INQ42_04865 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D INQ42_08465 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D INQ42_06565 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D INQ42_00815 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D INQ42_06255 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D INQ42_07385 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D INQ42_08285 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D INQ42_04400 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D INQ42_03945 PTS fructose IIA subunit family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D INQ42_06570 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D INQ42_10565 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:lavi00620]
D INQ42_01215 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D INQ42_11225 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D INQ42_11030 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_02085 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D INQ42_11045 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D INQ42_05110 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D INQ42_03390 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D INQ42_08875 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D INQ42_01920 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D INQ42_01915 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D INQ42_08000 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D INQ42_06785 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D INQ42_03030 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D INQ42_09305 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D INQ42_11300 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D INQ42_02715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D INQ42_05870 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D INQ42_07425 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D INQ42_11305 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D INQ42_03580 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D INQ42_06685 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D INQ42_12145 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lavi00630]
D INQ42_12140 aceA; isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D INQ42_01215 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D INQ42_12145 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D INQ42_02715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D INQ42_03210 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D INQ42_02720 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D INQ42_06355 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_04960 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D INQ42_12690 FAD-binding oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D INQ42_10745 (Fe-S)-binding protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D INQ42_01570 catalase K03781 katE; catalase [EC:1.11.1.6]
D INQ42_04755 catalase K03781 katE; catalase [EC:1.11.1.6]
D INQ42_11615 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D INQ42_03385 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D INQ42_00400 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D INQ42_02320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D INQ42_09665 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D INQ42_11875 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11870 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D INQ42_03750 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:lavi00640]
D INQ42_01215 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D INQ42_05110 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D INQ42_01660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D INQ42_01655 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D INQ42_07835 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D INQ42_01650 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07465 YhdH/YhfP family quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D INQ42_08875 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D INQ42_01920 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D INQ42_01915 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D INQ42_08000 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D INQ42_02880 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D INQ42_02885 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D INQ42_02720 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D INQ42_02735 bifunctional 2-methylcitrate dehydratase/aconitate hydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D INQ42_05765 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D INQ42_05770 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D INQ42_12415 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:lavi00650]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_06265 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D INQ42_08580 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D INQ42_05950 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D INQ42_05945 phaE; class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE
D INQ42_03695 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D INQ42_04960 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D INQ42_07810 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D INQ42_07805 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D INQ42_07820 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D INQ42_07815 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D INQ42_06785 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D INQ42_05330 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D INQ42_10510 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D INQ42_10515 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D INQ42_04155 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D INQ42_07560 hydrogenase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D INQ42_02940 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D INQ42_02935 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:lavi00660]
D INQ42_02940 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D INQ42_02935 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D INQ42_02880 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D INQ42_02885 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D INQ42_12365 MaoC family dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D INQ42_12370 CoA ester lyase K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D INQ42_12535 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D INQ42_02915 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D INQ42_12540 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D INQ42_02910 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:lavi00562]
D INQ42_04790 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D INQ42_09810 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D INQ42_07985 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lavi00190]
D INQ42_07970 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D INQ42_07965 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D INQ42_07960 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D INQ42_07955 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D INQ42_07950 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D INQ42_07945 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D INQ42_07940 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D INQ42_07935 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D INQ42_07930 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D INQ42_07925 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D INQ42_07920 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D INQ42_07915 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D INQ42_07910 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D INQ42_07905 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D INQ42_07810 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D INQ42_07805 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D INQ42_07820 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D INQ42_07815 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D INQ42_04305 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D INQ42_04310 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D INQ42_04315 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D INQ42_11420 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D INQ42_11445 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D INQ42_11460 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D INQ42_11465 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D INQ42_11450 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D INQ42_11425 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D INQ42_10875 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D INQ42_10880 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D INQ42_10885 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D INQ42_10890 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D INQ42_07610 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D INQ42_10990 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D INQ42_10980 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D INQ42_10985 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D INQ42_10995 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D INQ42_10975 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D INQ42_11010 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D INQ42_11000 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D INQ42_11005 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D INQ42_02975 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D INQ42_09425 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lavi00710]
D INQ42_03380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D INQ42_03335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D INQ42_03410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D INQ42_00125 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D INQ42_03285 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D INQ42_06560 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D INQ42_03090 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D INQ42_07985 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D INQ42_01765 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D INQ42_06575 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D INQ42_11305 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D INQ42_11300 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D INQ42_02715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:lavi00720]
D INQ42_06685 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D INQ42_11305 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D INQ42_02715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D INQ42_05870 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D INQ42_07425 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D INQ42_07810 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D INQ42_07805 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D INQ42_07820 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D INQ42_07815 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D INQ42_02885 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D INQ42_02880 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_12750 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D INQ42_06355 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D INQ42_08875 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D INQ42_01920 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D INQ42_01915 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D INQ42_08000 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D INQ42_06720 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D INQ42_02830 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D INQ42_05110 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D INQ42_01215 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:lavi00680]
D INQ42_02085 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D INQ42_02090 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D INQ42_02320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D INQ42_03775 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D INQ42_11305 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D INQ42_02715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D INQ42_03410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D INQ42_00125 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D INQ42_02995 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D INQ42_07335 NAD(P)/FAD-dependent oxidoreductase K18277 tmm; trimethylamine monooxygenase [EC:1.14.13.148]
D INQ42_05110 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D INQ42_01215 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D INQ42_06685 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D INQ42_00900 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D INQ42_05295 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D INQ42_07585 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:lavi00910]
D INQ42_06775 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D INQ42_10860 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D INQ42_10820 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D INQ42_12420 cbb3-type cytochrome c oxidase subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D INQ42_05690 nosZ; TAT-dependent nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D INQ42_07350 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D INQ42_07170 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D INQ42_00400 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D INQ42_07230 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:lavi00920]
D INQ42_10525 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D INQ42_10520 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D INQ42_10255 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D INQ42_04075 sulfite reductase flavoprotein subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D INQ42_06630 PepSY domain-containing protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D INQ42_06445 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D INQ42_08565 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D INQ42_00485 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D INQ42_03415 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D INQ42_10840 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D INQ42_06000 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D INQ42_09805 homoserine O-succinyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D INQ42_09800 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D INQ42_04680 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lavi00061]
D INQ42_08875 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D INQ42_01920 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D INQ42_01915 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D INQ42_08000 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D INQ42_00575 acyl carrier protein K02078 acpP; acyl carrier protein
D INQ42_09165 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D INQ42_09175 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D INQ42_05640 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D INQ42_09180 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D INQ42_00635 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D INQ42_10850 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D INQ42_09160 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D INQ42_00610 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_07220 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_09170 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_12380 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_10855 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D INQ42_08845 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D INQ42_09315 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D INQ42_06310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lavi00071]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_06260 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D INQ42_06265 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D INQ42_03570 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D INQ42_07840 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D INQ42_12290 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D INQ42_06310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D INQ42_02085 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D INQ42_00575 acyl carrier protein K02078 acpP; acyl carrier protein
D INQ42_09165 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D INQ42_09175 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lavi00561]
D INQ42_11045 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D INQ42_11995 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D INQ42_10220 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:lavi00564]
D INQ42_00475 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D INQ42_11995 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D INQ42_10650 tagD; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D INQ42_10220 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D INQ42_05875 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D INQ42_08820 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D INQ42_02220 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D INQ42_05940 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D INQ42_08050 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D INQ42_07735 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D INQ42_10765 haloacid dehalogenase-like hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D INQ42_00065 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D INQ42_00640 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D INQ42_05885 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D INQ42_06765 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:lavi00565]
D INQ42_05875 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D INQ42_05875 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D INQ42_05875 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:lavi00592]
D INQ42_05875 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D INQ42_06260 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:lavi01040]
D INQ42_01185 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D INQ42_01350 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D INQ42_01530 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D INQ42_09545 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lavi00230]
D INQ42_10075 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D INQ42_10260 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D INQ42_06565 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D INQ42_00815 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D INQ42_02450 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D INQ42_02800 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D INQ42_01865 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D INQ42_04020 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D INQ42_09575 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D INQ42_02230 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D INQ42_04025 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D INQ42_04350 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D INQ42_04345 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D INQ42_01755 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D INQ42_07430 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D INQ42_01895 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D INQ42_07340 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D INQ42_03805 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D INQ42_09045 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D INQ42_06715 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D INQ42_06275 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D INQ42_03155 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D INQ42_06710 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D INQ42_12065 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D INQ42_03170 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D INQ42_03365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D INQ42_11575 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D INQ42_03360 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D INQ42_03180 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D INQ42_09430 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D INQ42_10345 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D INQ42_08900 CHASE2 domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D INQ42_09055 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D INQ42_03880 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D INQ42_11715 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D INQ42_04435 DUF3412 domain-containing protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D INQ42_03000 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D INQ42_10180 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D INQ42_10525 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D INQ42_10520 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:lavi00240]
D INQ42_07075 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D INQ42_07080 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D INQ42_09670 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D INQ42_05020 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D INQ42_04870 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D INQ42_00825 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D INQ42_02310 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D INQ42_08800 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D INQ42_06275 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D INQ42_08940 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D INQ42_06850 M48 family metallopeptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D INQ42_03765 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D INQ42_06220 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D INQ42_07340 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D INQ42_03805 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D INQ42_03640 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D INQ42_04435 DUF3412 domain-containing protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D INQ42_11740 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D INQ42_08100 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D INQ42_03365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D INQ42_11575 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D INQ42_03360 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D INQ42_09140 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D INQ42_00810 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D INQ42_01165 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D INQ42_10190 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D INQ42_02000 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lavi00250]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D INQ42_02370 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D INQ42_10225 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D INQ42_01095 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D INQ42_08395 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D INQ42_08740 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D INQ42_06060 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D INQ42_11240 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D INQ42_05055 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D INQ42_05075 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D INQ42_03880 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D INQ42_07430 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D INQ42_09670 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D INQ42_07350 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D INQ42_07170 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D INQ42_11470 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D INQ42_00400 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D INQ42_07075 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D INQ42_07080 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D INQ42_10960 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D INQ42_02800 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lavi00260]
D INQ42_02905 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D INQ42_04175 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D INQ42_08030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D INQ42_09795 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D INQ42_02900 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D INQ42_02895 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D INQ42_02320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D INQ42_00900 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D INQ42_05295 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D INQ42_07585 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D INQ42_02755 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D INQ42_02760 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D INQ42_12510 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D INQ42_09665 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D INQ42_11875 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11870 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D INQ42_02220 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D INQ42_05940 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D INQ42_10695 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D INQ42_10675 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D INQ42_09790 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D INQ42_02925 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D INQ42_12220 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D INQ42_08005 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D INQ42_08010 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:lavi00270]
D INQ42_00485 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D INQ42_03415 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D INQ42_10840 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D INQ42_10675 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D INQ42_10695 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D INQ42_07370 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D INQ42_11920 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D INQ42_07620 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D INQ42_10755 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D INQ42_12110 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D INQ42_04990 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D INQ42_09040 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D INQ42_07495 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D INQ42_05280 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D INQ42_05270 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D INQ42_05275 cupin domain-containing protein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D INQ42_07625 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D INQ42_06835 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D INQ42_10940 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D INQ42_02855 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D INQ42_02905 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D INQ42_04175 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D INQ42_08030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D INQ42_09795 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D INQ42_02900 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D INQ42_06000 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D INQ42_09805 homoserine O-succinyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D INQ42_09800 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D INQ42_02825 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D INQ42_02930 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D INQ42_11310 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D INQ42_10305 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D INQ42_00970 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D INQ42_08565 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D INQ42_02715 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D INQ42_09790 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D INQ42_05295 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D INQ42_07585 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:lavi00280]
D INQ42_02930 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D INQ42_05395 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D INQ42_01660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D INQ42_01655 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D INQ42_07835 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D INQ42_01650 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_05390 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D INQ42_06260 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D INQ42_12100 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D INQ42_05335 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D INQ42_05365 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D INQ42_05340 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D INQ42_05330 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D INQ42_10510 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D INQ42_10515 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lavi00290]
D INQ42_02925 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D INQ42_12220 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D INQ42_12535 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D INQ42_02915 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D INQ42_12540 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D INQ42_02910 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D INQ42_02940 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D INQ42_02935 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D INQ42_02945 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D INQ42_02950 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D INQ42_02930 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D INQ42_05395 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D INQ42_11240 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00300 Lysine biosynthesis [PATH:lavi00300]
D INQ42_09795 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D INQ42_02905 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D INQ42_04175 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D INQ42_08030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D INQ42_08250 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D INQ42_07085 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D INQ42_08770 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D INQ42_03040 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D INQ42_08760 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D INQ42_11785 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D INQ42_08315 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D INQ42_09960 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D INQ42_09955 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lavi00310]
D INQ42_04880 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D INQ42_07450 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07840 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D INQ42_12290 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_12560 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
C 00220 Arginine biosynthesis [PATH:lavi00220]
D INQ42_05050 N-acetylornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
D INQ42_05055 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D INQ42_05075 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D INQ42_01630 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D INQ42_00400 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D INQ42_07075 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D INQ42_07080 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D INQ42_07350 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D INQ42_07170 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D INQ42_11240 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D INQ42_05065 acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8]
D INQ42_05070 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D INQ42_03040 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D INQ42_05060 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:lavi00330]
D INQ42_11740 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D INQ42_12105 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D INQ42_06200 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D INQ42_12110 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D INQ42_07620 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D INQ42_10755 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D INQ42_12510 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D INQ42_12295 FAD-dependent oxidoreductase K21639 E1.4.3.25; L-arginine oxidase [EC:1.4.3.25]
D INQ42_12305 FAD-dependent oxidoreductase K21639 E1.4.3.25; L-arginine oxidase [EC:1.4.3.25]
D INQ42_01630 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D INQ42_09705 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D INQ42_11470 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D INQ42_05090 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D INQ42_05095 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D INQ42_10080 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:lavi00340]
D INQ42_05225 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D INQ42_05260 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D INQ42_05250 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D INQ42_05245 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D INQ42_05255 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D INQ42_05240 hisB; bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D INQ42_05235 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D INQ42_05230 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D INQ42_05210 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D INQ42_03520 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D INQ42_09485 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D INQ42_09480 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D INQ42_03750 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D INQ42_12510 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D INQ42_00215 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:lavi00350]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D INQ42_05235 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D INQ42_07625 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D INQ42_01680 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D INQ42_01685 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D INQ42_10720 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D INQ42_10725 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D INQ42_10835 pyridoxal-dependent decarboxylase K22330 tyrDC; tyrosine decarboxylase [EC:4.1.1.25]
D INQ42_12510 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D INQ42_02085 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D INQ42_03450 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:lavi00360]
D INQ42_00135 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D INQ42_12510 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D INQ42_12570 phenylacetate--CoA ligase family protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D INQ42_05235 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D INQ42_07625 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D INQ42_01680 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D INQ42_01030 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D INQ42_11270 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D INQ42_04115 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:lavi00380]
D INQ42_01665 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D INQ42_07255 FAD-dependent monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D INQ42_07250 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D INQ42_07240 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D INQ42_07245 amidohydrolase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D INQ42_07225 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D INQ42_07235 RidA family protein K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D INQ42_07450 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07840 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D INQ42_12290 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_12510 FAD-dependent oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D INQ42_01570 catalase K03781 katE; catalase [EC:1.11.1.6]
D INQ42_04755 catalase K03781 katE; catalase [EC:1.11.1.6]
D INQ42_11615 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lavi00400]
D INQ42_02695 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D INQ42_09735 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D INQ42_01925 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D INQ42_00555 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D INQ42_09730 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D INQ42_07575 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D INQ42_08035 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D INQ42_10785 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D INQ42_10780 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D INQ42_10775 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D INQ42_08015 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D INQ42_10770 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D INQ42_08005 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D INQ42_08010 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D INQ42_07580 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D INQ42_05235 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D INQ42_07625 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D INQ42_00135 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D INQ42_00570 pteridine-dependent deoxygenase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:lavi00410]
D INQ42_08160 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D INQ42_08165 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:lavi00430]
D INQ42_04740 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11275 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11285 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_07350 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D INQ42_05110 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lavi00450]
D INQ42_09800 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D INQ42_07370 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D INQ42_10675 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D INQ42_06835 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D INQ42_04125 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D INQ42_06415 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D INQ42_06640 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D INQ42_10525 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D INQ42_10520 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D INQ42_08115 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lavi00460]
D INQ42_04740 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11275 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11285 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_02370 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D INQ42_10225 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D INQ42_02320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lavi00470]
D INQ42_01035 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D INQ42_09930 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D INQ42_06325 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D INQ42_11785 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D INQ42_08315 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D INQ42_04175 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D INQ42_01030 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D INQ42_11270 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:lavi00480]
D INQ42_04740 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11275 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11285 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11310 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D INQ42_10305 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D INQ42_00970 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D INQ42_02195 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D INQ42_11610 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D INQ42_06455 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D INQ42_12455 MAPEG family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D INQ42_12750 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D INQ42_06550 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D INQ42_06580 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D INQ42_07480 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D INQ42_12110 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:lavi00540]
D INQ42_08850 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D INQ42_09910 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D INQ42_08840 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D INQ42_02815 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D INQ42_08855 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D INQ42_07760 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D INQ42_03995 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D INQ42_03770 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D INQ42_03990 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D INQ42_07755 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D INQ42_02035 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D INQ42_01120 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D INQ42_02030 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D INQ42_06585 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D INQ42_09265 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lavi00541]
D INQ42_06255 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D INQ42_08285 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D INQ42_07385 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D INQ42_04400 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D INQ42_04205 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D INQ42_04200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D INQ42_04210 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D INQ42_04215 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D INQ42_10565 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D INQ42_10965 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D INQ42_08465 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:lavi00550]
D INQ42_04005 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D INQ42_04865 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D INQ42_09935 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D INQ42_04185 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D INQ42_04180 endonuclease domain-containing protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D INQ42_09960 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D INQ42_09930 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D INQ42_09955 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D INQ42_08815 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D INQ42_00395 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D INQ42_09950 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D INQ42_09940 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D INQ42_03600 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D INQ42_03220 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D INQ42_10330 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D INQ42_11695 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D INQ42_09965 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D INQ42_11675 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D INQ42_09605 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:lavi00552]
D INQ42_00395 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lavi00730]
D INQ42_02955 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D INQ42_08275 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D INQ42_04665 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D INQ42_03475 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D INQ42_03050 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D INQ42_02365 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D INQ42_11245 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D INQ42_03710 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D INQ42_03000 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:lavi00740]
D INQ42_12200 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D INQ42_02350 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D INQ42_02330 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D INQ42_11605 HAD family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D INQ42_02355 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D INQ42_02345 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D INQ42_08490 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D INQ42_10075 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:lavi00750]
D INQ42_09720 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D INQ42_00410 pdxK; pyridoxine/pyridoxal/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D INQ42_07585 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D INQ42_10165 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D INQ42_00055 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D INQ42_02895 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lavi00760]
D INQ42_04335 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D INQ42_07340 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D INQ42_03805 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D INQ42_08955 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D INQ42_01850 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D INQ42_02065 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D INQ42_08330 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D INQ42_08455 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D INQ42_07345 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D INQ42_10035 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D INQ42_10055 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D INQ42_10030 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D INQ42_12395 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
C 00770 Pantothenate and CoA biosynthesis [PATH:lavi00770]
D INQ42_02940 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D INQ42_02935 acetolactate synthase K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D INQ42_02945 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D INQ42_02950 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D INQ42_08170 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D INQ42_08165 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D INQ42_01615 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D INQ42_04725 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D INQ42_09885 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D INQ42_01270 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D INQ42_02930 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D INQ42_08160 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:lavi00780]
D INQ42_12235 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D INQ42_00635 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D INQ42_10850 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D INQ42_09160 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D INQ42_00610 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_07220 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_09170 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_12380 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_08845 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D INQ42_09315 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D INQ42_12240 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D INQ42_12245 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D INQ42_12250 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D INQ42_01610 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lavi00785]
D INQ42_11665 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D INQ42_11660 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D INQ42_06800 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11225 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D INQ42_11030 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D INQ42_07445 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D INQ42_07450 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D INQ42_01660 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D INQ42_01655 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D INQ42_07835 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D INQ42_01650 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D INQ42_09665 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D INQ42_11875 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D INQ42_11870 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:lavi00790]
D INQ42_00205 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D INQ42_03710 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D INQ42_11390 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D INQ42_08175 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D INQ42_11380 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D INQ42_03845 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D INQ42_10185 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D INQ42_02785 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D INQ42_12200 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D INQ42_02350 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D INQ42_09155 aminodeoxychorismate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D INQ42_09150 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D INQ42_10930 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D INQ42_06155 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D INQ42_00135 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D INQ42_11370 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D INQ42_10405 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D INQ42_10400 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D INQ42_12725 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:lavi00670]
D INQ42_10185 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D INQ42_06720 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D INQ42_02320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D INQ42_04020 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D INQ42_01895 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D INQ42_01080 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D INQ42_11875 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D INQ42_07370 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D INQ42_10190 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D INQ42_02830 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D INQ42_03100 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lavi00860]
D INQ42_09515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D INQ42_02425 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D INQ42_03045 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D INQ42_00560 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D INQ42_11835 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D INQ42_00450 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D INQ42_09745 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D INQ42_00740 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D INQ42_10810 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D INQ42_03705 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D INQ42_12025 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D INQ42_00445 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D INQ42_11420 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D INQ42_11425 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D INQ42_10145 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D INQ42_01820 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D INQ42_07485 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lavi00130]
D INQ42_00570 pteridine-dependent deoxygenase K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D INQ42_12265 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D INQ42_04995 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D INQ42_10135 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D INQ42_11735 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D INQ42_10130 FAD-dependent oxidoreductase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D INQ42_10750 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D INQ42_00370 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D INQ42_02400 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D INQ42_01680 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lavi00900]
D INQ42_04665 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D INQ42_08825 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D INQ42_03785 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D INQ42_02440 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D INQ42_03790 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D INQ42_04850 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D INQ42_08475 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_08895 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D INQ42_04190 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D INQ42_08815 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:lavi00907]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D INQ42_03025 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase
D INQ42_05330 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D INQ42_06260 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D INQ42_03285 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D INQ42_06560 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:lavi00523]
D INQ42_04205 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D INQ42_04200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D INQ42_04210 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D INQ42_04215 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D INQ42_04200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:lavi00332]
D INQ42_05090 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D INQ42_05095 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:lavi00261]
D INQ42_10525 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D INQ42_10520 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D INQ42_02905 thrA; bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D INQ42_04175 bifunctional aspartate kinase/diaminopimelate decarboxylase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D INQ42_08030 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D INQ42_08250 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D INQ42_07085 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lavi00521]
D INQ42_06565 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D INQ42_00815 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D INQ42_04790 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D INQ42_04205 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D INQ42_04200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D INQ42_04210 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D INQ42_04215 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:lavi00525]
D INQ42_04205 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D INQ42_04200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:lavi00401]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D INQ42_05235 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D INQ42_07625 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D INQ42_10785 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D INQ42_10780 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D INQ42_09175 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D INQ42_00610 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_07220 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_09170 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_12380 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_09315 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D INQ42_00575 acyl carrier protein K02078 acpP; acyl carrier protein
D INQ42_09165 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:lavi00999]
D INQ42_11920 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D INQ42_00555 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lavi00362]
D INQ42_06260 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D INQ42_07225 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D INQ42_06265 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D INQ42_07840 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D INQ42_12290 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation [PATH:lavi00364]
D INQ42_05455 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D INQ42_08090 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:lavi00625]
D INQ42_02085 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:lavi00361]
D INQ42_05455 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D INQ42_08090 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:lavi00623]
D INQ42_05455 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D INQ42_08090 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D INQ42_07225 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D INQ42_06260 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:lavi00643]
D INQ42_01685 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D INQ42_10720 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D INQ42_10725 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:lavi00930]
D INQ42_09125 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:lavi00626]
D INQ42_02085 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lavi03020]
D INQ42_02525 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D INQ42_02530 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D INQ42_02680 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D INQ42_03175 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lavi03010]
D INQ42_06225 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D INQ42_08785 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D INQ42_02590 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D INQ42_02675 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D INQ42_02645 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D INQ42_07195 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D INQ42_02540 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D INQ42_02630 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D INQ42_10735 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D INQ42_02555 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D INQ42_02670 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D INQ42_02535 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D INQ42_02665 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D INQ42_02625 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D INQ42_07870 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D INQ42_04365 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D INQ42_02605 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D INQ42_07190 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D INQ42_02580 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D INQ42_08500 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D INQ42_11400 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D INQ42_02510 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D INQ42_02575 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D INQ42_02560 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D INQ42_02565 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D INQ42_02620 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D INQ42_02635 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D INQ42_02520 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D INQ42_07185 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D INQ42_02515 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D INQ42_02505 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D INQ42_10740 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D INQ42_02610 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D INQ42_02655 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D INQ42_02595 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D INQ42_02685 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D INQ42_02640 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D INQ42_04380 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D INQ42_04635 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D INQ42_08515 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D INQ42_02585 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D INQ42_02570 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D INQ42_02615 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D INQ42_02455 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D INQ42_08510 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D INQ42_01245 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D INQ42_02600 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D INQ42_02650 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D INQ42_03205 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D INQ42_09185 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D INQ42_01240 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D INQ42_12835 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D INQ42_04630 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D INQ42_06215 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D INQ42_00860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D INQ42_03065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D INQ42_03080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D INQ42_00875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D INQ42_00880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D INQ42_03085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lavi00970]
D INQ42_00865 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D INQ42_03070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D INQ42_06670 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D INQ42_04935 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D INQ42_08420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D INQ42_12270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D INQ42_09380 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D INQ42_04885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D INQ42_04475 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D INQ42_09325 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D INQ42_09330 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D INQ42_07725 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D INQ42_10730 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D INQ42_02445 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D INQ42_06665 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D INQ42_08185 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D INQ42_07730 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D INQ42_03490 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D INQ42_02475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D INQ42_09375 tRNA-His K14226 tRNA-His; tRNA His
D INQ42_00870 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D INQ42_03075 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D INQ42_08720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_07975 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_09365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_05965 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_07660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_09370 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D INQ42_10395 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D INQ42_07900 tRNA-Met K14230 tRNA-Met; tRNA Met
D INQ42_01135 tRNA-Ile K14230 tRNA-Met; tRNA Met
D INQ42_01805 tRNA-Met K14230 tRNA-Met; tRNA Met
D INQ42_04690 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D INQ42_05200 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D INQ42_04660 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D INQ42_09385 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D INQ42_08425 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D INQ42_06130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D INQ42_09280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D INQ42_09250 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D INQ42_02480 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D INQ42_01625 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D INQ42_08470 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D INQ42_02490 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D INQ42_02470 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D INQ42_09335 tRNA-Val K14237 tRNA-Val; tRNA Val
D INQ42_07640 tRNA-Val K14237 tRNA-Val; tRNA Val
D INQ42_04490 tRNA-Val K14237 tRNA-Val; tRNA Val
D INQ42_09515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D INQ42_10110 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D INQ42_08435 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D INQ42_10485 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D INQ42_07205 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D INQ42_12070 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D INQ42_12075 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D INQ42_04620 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D INQ42_06120 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D INQ42_05040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D INQ42_08115 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D INQ42_01080 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D INQ42_02205 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D INQ42_08970 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D INQ42_08485 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D INQ42_07040 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D INQ42_12090 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D INQ42_10560 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D INQ42_05205 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D INQ42_04640 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D INQ42_04645 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D INQ42_00855 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D INQ42_01645 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lavi03060]
D INQ42_02660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D INQ42_02495 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D INQ42_07980 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D INQ42_04780 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D INQ42_04785 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D INQ42_04775 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D INQ42_12825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D INQ42_09895 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D INQ42_00470 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D INQ42_04360 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D INQ42_09255 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D INQ42_04715 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D INQ42_12035 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D INQ42_12040 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D INQ42_12045 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D INQ42_09100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D INQ42_08480 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lavi04122]
D INQ42_08565 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D INQ42_06375 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D INQ42_03480 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:lavi03018]
D INQ42_01810 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D INQ42_06140 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D INQ42_00940 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D INQ42_03775 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D INQ42_07865 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D INQ42_08230 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D INQ42_08700 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D INQ42_06945 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D INQ42_10385 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D INQ42_00930 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D INQ42_07100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D INQ42_01960 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D INQ42_03855 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D INQ42_09425 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D INQ42_08180 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lavi03030]
D INQ42_09290 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_12665 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_08870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D INQ42_09245 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D INQ42_09135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D INQ42_08960 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D INQ42_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D INQ42_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D INQ42_07180 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D INQ42_11415 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D INQ42_04195 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D INQ42_09295 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D INQ42_08860 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D INQ42_00735 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D INQ42_07505 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lavi03410]
D INQ42_08590 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D INQ42_00975 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D INQ42_04705 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D INQ42_06435 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D INQ42_01180 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D INQ42_09685 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D INQ42_05495 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D INQ42_00830 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D INQ42_01285 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D INQ42_00735 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D INQ42_07060 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D INQ42_07505 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lavi03420]
D INQ42_09465 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D INQ42_06925 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D INQ42_08520 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D INQ42_04485 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D INQ42_07740 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D INQ42_00705 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D INQ42_00735 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D INQ42_07505 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lavi03430]
D INQ42_04395 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D INQ42_08135 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D INQ42_00705 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D INQ42_07260 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D INQ42_08240 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D INQ42_08890 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D INQ42_07060 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D INQ42_04195 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D INQ42_08870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D INQ42_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D INQ42_09245 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D INQ42_08960 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D INQ42_09135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D INQ42_09290 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_12665 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D INQ42_07505 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lavi03440]
D INQ42_07060 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D INQ42_04195 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D INQ42_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D INQ42_09080 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D INQ42_09235 recR; recombination protein RecR K06187 recR; recombination protein RecR
D INQ42_00735 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D INQ42_10455 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D INQ42_10445 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D INQ42_10460 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D INQ42_03190 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D INQ42_05785 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D INQ42_05780 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D INQ42_05790 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D INQ42_08870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D INQ42_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D INQ42_09245 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D INQ42_08960 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D INQ42_09135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D INQ42_09290 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_12665 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D INQ42_00990 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:lavi03450]
D INQ42_01505 Ku protein K10979 ku; DNA end-binding protein Ku
D INQ42_01510 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lavi02010]
D INQ42_06995 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D INQ42_07000 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D INQ42_07005 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D INQ42_00150 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D INQ42_00145 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D INQ42_00180 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D INQ42_00185 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D INQ42_10535 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D INQ42_00190 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D INQ42_10545 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D INQ42_00175 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D INQ42_00195 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D INQ42_10540 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D INQ42_08605 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D INQ42_08610 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D INQ42_08615 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D INQ42_08620 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D INQ42_10670 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D INQ42_10665 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D INQ42_12810 ABC transporter permease K09696 natB; sodium transport system permease protein
D INQ42_12805 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D INQ42_05810 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D INQ42_07790 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D INQ42_05815 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D INQ42_07785 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D INQ42_06030 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D INQ42_06035 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D INQ42_06040 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D INQ42_06045 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D INQ42_02190 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D INQ42_02185 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D INQ42_03975 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D INQ42_05705 ABC transporter permease K19341 nosY; Cu-processing system permease protein
D INQ42_05700 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D INQ42_00950 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D INQ42_00945 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D INQ42_07765 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:lavi02060]
D INQ42_03935 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D INQ42_03940 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D INQ42_03945 PTS fructose IIA subunit family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D INQ42_03960 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:lavi03070]
D INQ42_02040 TolC family outer membrane protein K12340 tolC; outer membrane protein
D INQ42_04545 sctJ; type III secretion inner membrane ring lipoprotein SctJ K03222 yscJ; type III secretion protein J
D INQ42_04590 EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R
D INQ42_04595 sctS; type III secretion system export apparatus subunit SctS K03227 yscS; type III secretion protein S
D INQ42_04600 sctT; type III secretion system export apparatus subunit SctT K03228 yscT; type III secretion protein T
D INQ42_04605 sctU; type III secretion system export apparatus subunit SctU K03229 yscU; type III secretion protein U
D INQ42_04565 sctV; type III secretion system export apparatus subunit SctV K03230 yscV; type III secretion protein V
D INQ42_04530 FliI/YscN family ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D INQ42_04585 sctQ; type III secretion system cytoplasmic ring protein SctQ K03225 yscQ; type III secretion protein Q
D INQ42_04535 hypothetical protein K03223 yscL; type III secretion protein L
D INQ42_02300 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D INQ42_02255 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D INQ42_10685 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D INQ42_02260 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D INQ42_02265 GspH/FimT family pseudopilin K02457 gspH; general secretion pathway protein H
D INQ42_02270 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D INQ42_02275 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D INQ42_02280 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D INQ42_02285 PilN domain-containing protein K02461 gspL; general secretion pathway protein L
D INQ42_02290 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D INQ42_02250 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D INQ42_10690 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D INQ42_04780 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D INQ42_04785 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D INQ42_02495 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D INQ42_07980 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D INQ42_02660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D INQ42_04775 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D INQ42_12825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D INQ42_09895 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D INQ42_04715 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D INQ42_00470 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D INQ42_04360 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D INQ42_12035 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D INQ42_12040 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D INQ42_12045 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D INQ42_00265 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D INQ42_09830 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D INQ42_00775 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D INQ42_00755 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D INQ42_00530 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D INQ42_00745 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D INQ42_00795 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D INQ42_08200 protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lavi02020]
D INQ42_09420 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D INQ42_09415 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D INQ42_03710 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D INQ42_08605 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D INQ42_01595 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D INQ42_01590 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D INQ42_09110 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D INQ42_11580 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D INQ42_07715 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D INQ42_07720 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D INQ42_11425 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D INQ42_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D INQ42_09605 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D INQ42_11830 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR
D INQ42_12805 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D INQ42_12810 ABC transporter permease K09696 natB; sodium transport system permease protein
D INQ42_06135 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D INQ42_08430 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D INQ42_11860 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D INQ42_08775 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D INQ42_12120 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D INQ42_00400 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_02875 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D INQ42_02870 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D INQ42_03970 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D INQ42_09835 pilin K02650 pilA; type IV pilus assembly protein PilA
D INQ42_09840 pilin K02650 pilA; type IV pilus assembly protein PilA
D INQ42_10285 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D INQ42_10290 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D INQ42_10280 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D INQ42_10300 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D INQ42_07470 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D INQ42_10295 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D INQ42_10275 chemotaxis protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D INQ42_10270 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D INQ42_10760 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D INQ42_04305 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D INQ42_04310 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D INQ42_04315 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D INQ42_10875 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D INQ42_10880 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D INQ42_10885 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D INQ42_10890 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D INQ42_07610 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D INQ42_02040 TolC family outer membrane protein K12340 tolC; outer membrane protein
D INQ42_08290 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:lavi04148]
D INQ42_01630 rocF; arginase K01476 rocF; arginase [EC:3.5.3.1]
D INQ42_04305 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lavi02024]
D INQ42_03855 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D INQ42_10785 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D INQ42_10780 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D INQ42_02695 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D INQ42_06310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D INQ42_10760 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D INQ42_09510 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D INQ42_12200 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D INQ42_02330 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D INQ42_06915 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D INQ42_12825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D INQ42_01235 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D INQ42_11980 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D INQ42_02495 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D INQ42_07980 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D INQ42_02660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D INQ42_04775 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D INQ42_09895 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D INQ42_04715 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D INQ42_00470 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D INQ42_04360 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lavi02040]
D INQ42_04570 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D INQ42_01130 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D INQ42_03970 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D INQ42_03775 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:lavi04980]
D INQ42_10145 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D INQ42_07370 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lavi01501]
D INQ42_00835 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D INQ42_09050 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D INQ42_11860 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D INQ42_04285 TetR/AcrR family transcriptional regulator K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC
D INQ42_03420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_06905 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_03425 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D INQ42_06910 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D INQ42_06915 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D INQ42_02040 TolC family outer membrane protein K12340 tolC; outer membrane protein
D INQ42_03220 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D INQ42_11695 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D INQ42_09965 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D INQ42_03725 bla; subclass B3 metallo-beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:lavi01502]
D INQ42_09930 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D INQ42_01035 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D INQ42_09955 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D INQ42_09950 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D INQ42_09940 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D INQ42_09605 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lavi01503]
D INQ42_01595 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D INQ42_01590 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D INQ42_06585 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D INQ42_08140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D INQ42_09110 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D INQ42_11580 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D INQ42_11325 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D INQ42_11330 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D INQ42_03420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_06905 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_03425 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D INQ42_06910 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D INQ42_02040 TolC family outer membrane protein K12340 tolC; outer membrane protein
D INQ42_08850 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lavi01000]
C 01001 Protein kinases [BR:lavi01001]
D INQ42_06980 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D INQ42_08200 protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D INQ42_01170 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D INQ42_01970 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D INQ42_02245 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D INQ42_05350 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D INQ42_08300 polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D INQ42_09420 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D INQ42_01595 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D INQ42_06610 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D INQ42_02875 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D INQ42_10280 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
C 01009 Protein phosphatases and associated proteins [BR:lavi01009]
D INQ42_02855 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D INQ42_03625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D INQ42_09285 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lavi01002]
D INQ42_08480 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D INQ42_09880 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D INQ42_06710 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D INQ42_12065 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D INQ42_02800 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D INQ42_10960 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D INQ42_01095 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D INQ42_08395 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D INQ42_08740 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D INQ42_05535 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D INQ42_09655 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D INQ42_06865 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D INQ42_04845 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D INQ42_05775 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D INQ42_08235 peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D INQ42_09605 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D INQ42_00520 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D INQ42_00500 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D INQ42_02195 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D INQ42_11610 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D INQ42_09490 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D INQ42_08760 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D INQ42_05625 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D INQ42_01515 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D INQ42_08780 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D INQ42_03135 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D INQ42_03130 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D INQ42_01425 beta-aspartyl-peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D INQ42_03840 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D INQ42_04970 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D INQ42_09410 M48 family metallopeptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D INQ42_08830 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D INQ42_01600 zinc-dependent peptidase K09933 mtfA; MtfA peptidase
D INQ42_08655 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D INQ42_09110 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D INQ42_11580 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D INQ42_01235 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D INQ42_11980 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D INQ42_11805 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D INQ42_11800 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D INQ42_11675 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D INQ42_09355 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D INQ42_09345 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D INQ42_05930 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D INQ42_08450 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D INQ42_09100 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D INQ42_10080 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D INQ42_00910 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D INQ42_11655 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D INQ42_01010 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D INQ42_01430 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D INQ42_04840 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D INQ42_05595 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D INQ42_11770 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D INQ42_10225 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D INQ42_04740 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11275 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_11285 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D INQ42_08915 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D INQ42_04925 TldD/PmbA family protein K03568 tldD; TldD protein
D INQ42_04930 TldD/PmbA family protein K03568 tldD; TldD protein
D INQ42_08925 tldD; metalloprotease TldD K03568 tldD; TldD protein
D INQ42_03870 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D INQ42_03865 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:lavi01003]
D INQ42_03600 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D INQ42_10330 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D INQ42_03220 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D INQ42_09435 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D INQ42_11565 cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lavi01005]
D INQ42_08850 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D INQ42_08855 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D INQ42_09910 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D INQ42_08840 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D INQ42_02815 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D INQ42_07760 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D INQ42_01120 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D INQ42_02030 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D INQ42_02035 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D INQ42_06585 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D INQ42_09265 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D INQ42_03770 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D INQ42_07755 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D INQ42_03990 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D INQ42_03995 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D INQ42_09270 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D INQ42_03605 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lavi01011]
D INQ42_04005 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D INQ42_04865 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D INQ42_09935 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D INQ42_09960 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D INQ42_09930 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D INQ42_01035 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D INQ42_05595 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D INQ42_09950 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D INQ42_09940 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D INQ42_00395 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D INQ42_08495 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D INQ42_03220 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D INQ42_10330 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D INQ42_11695 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D INQ42_09965 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D INQ42_11675 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D INQ42_03600 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D INQ42_09605 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D INQ42_01515 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D INQ42_00520 M15 family metallopeptidase K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D INQ42_11350 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D INQ42_11685 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D INQ42_08055 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D INQ42_09310 lytic transglycosylase domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D INQ42_09145 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D INQ42_11680 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D INQ42_08140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:lavi01004]
D INQ42_09175 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D INQ42_05640 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D INQ42_09180 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D INQ42_00635 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D INQ42_10850 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D INQ42_09160 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D INQ42_00610 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_07220 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_09170 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_12380 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D INQ42_10855 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D INQ42_08845 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D INQ42_09315 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D INQ42_01530 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D INQ42_09545 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D INQ42_01185 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D INQ42_01350 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D INQ42_01215 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D INQ42_06310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D INQ42_11995 plsB; glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:lavi01006]
D INQ42_08895 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D INQ42_04190 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D INQ42_08815 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D INQ42_03850 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D INQ42_12265 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D INQ42_11420 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:lavi01007]
D INQ42_09515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D INQ42_10110 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D INQ42_04965 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D INQ42_00855 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D INQ42_01645 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D INQ42_05040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D INQ42_12090 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D INQ42_08115 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D INQ42_08485 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D INQ42_02205 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D INQ42_08970 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D INQ42_07040 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D INQ42_10485 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D INQ42_07205 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D INQ42_05205 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D INQ42_12070 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D INQ42_12075 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D INQ42_06120 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D INQ42_10560 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D INQ42_04620 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D INQ42_08435 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D INQ42_04640 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D INQ42_04645 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D INQ42_02710 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D INQ42_11240 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D INQ42_07625 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D INQ42_06055 pyridoxal phosphate-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D INQ42_05235 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D INQ42_02755 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D INQ42_12245 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D INQ42_03040 acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D INQ42_03045 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D INQ42_02930 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D INQ42_07585 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lavi00194]
D INQ42_10975 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D INQ42_10980 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D INQ42_10985 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D INQ42_10990 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D INQ42_10995 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D INQ42_11000 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D INQ42_11005 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D INQ42_11010 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lavi03000]
D INQ42_02965 helix-turn-helix transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D INQ42_10100 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D INQ42_12500 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D INQ42_02050 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D INQ42_04285 TetR/AcrR family transcriptional regulator K18130 nalC; TetR/AcrR family transcriptional regulator, transcriptional repressor NalC
D INQ42_11750 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D INQ42_01025 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D INQ42_11145 helix-turn-helix domain-containing protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D INQ42_07115 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D INQ42_09510 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D INQ42_10760 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D INQ42_10815 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D INQ42_10925 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D INQ42_01610 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D INQ42_01900 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D INQ42_09860 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D INQ42_08980 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D INQ42_11470 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D INQ42_05685 regulatory protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D INQ42_02080 frmR; formaldehyde-responsive transcriptional repressor FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D INQ42_07520 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D INQ42_01255 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D INQ42_08255 glycine cleavage system protein R K03567 gcvR; glycine cleavage system transcriptional repressor
D INQ42_08725 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D INQ42_09680 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D INQ42_12745 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D INQ42_02325 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D INQ42_09980 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lavi03021]
D INQ42_02680 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D INQ42_02525 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D INQ42_02530 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D INQ42_03175 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D INQ42_01130 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D INQ42_09120 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D INQ42_01525 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D INQ42_11760 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D INQ42_00980 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D INQ42_03970 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D INQ42_07890 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D INQ42_02360 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D INQ42_02500 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D INQ42_04320 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D INQ42_04325 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D INQ42_12745 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D INQ42_07070 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D INQ42_08070 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D INQ42_00930 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:lavi03019]
D INQ42_06140 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D INQ42_08935 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D INQ42_09090 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D INQ42_08700 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D INQ42_00235 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D INQ42_06695 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D INQ42_00940 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D INQ42_08230 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D INQ42_06945 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D INQ42_10385 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D INQ42_03775 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D INQ42_07865 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D INQ42_00930 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D INQ42_07100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D INQ42_01960 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D INQ42_03855 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D INQ42_09425 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D INQ42_08180 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D INQ42_01810 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D INQ42_08430 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D INQ42_03950 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D INQ42_10355 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D INQ42_12775 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:lavi03011]
D INQ42_06225 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D INQ42_08785 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D INQ42_02590 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D INQ42_02675 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D INQ42_02645 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D INQ42_07195 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D INQ42_02540 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D INQ42_02630 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D INQ42_10735 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D INQ42_02555 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D INQ42_02670 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D INQ42_02535 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D INQ42_02665 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D INQ42_02625 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D INQ42_07870 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D INQ42_04365 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D INQ42_02605 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D INQ42_07190 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D INQ42_02580 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D INQ42_08500 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D INQ42_11400 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D INQ42_09495 30S ribosomal protein THX K19033 PSRP4; 30S ribosomal protein S31
D INQ42_02510 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D INQ42_02575 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D INQ42_02560 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D INQ42_02565 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D INQ42_02620 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D INQ42_02635 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D INQ42_07185 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D INQ42_02515 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D INQ42_02505 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D INQ42_02520 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D INQ42_10740 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D INQ42_02610 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D INQ42_02655 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D INQ42_02595 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D INQ42_02685 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D INQ42_02640 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D INQ42_04380 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D INQ42_04635 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D INQ42_08515 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D INQ42_02585 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D INQ42_02570 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D INQ42_02615 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D INQ42_08510 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D INQ42_01245 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D INQ42_02600 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D INQ42_02650 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D INQ42_03205 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D INQ42_09185 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D INQ42_01240 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D INQ42_12835 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D INQ42_04630 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D INQ42_06215 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D INQ42_02455 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D INQ42_00880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D INQ42_03085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D INQ42_00860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D INQ42_03065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D INQ42_03080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D INQ42_00875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lavi03009]
D INQ42_09090 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D INQ42_06980 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D INQ42_06695 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D INQ42_09085 era; GTPase Era K03595 era; GTPase
D INQ42_08505 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D INQ42_12745 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D INQ42_07890 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D INQ42_02360 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D INQ42_02500 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D INQ42_01555 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D INQ42_10170 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D INQ42_01085 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D INQ42_01550 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D INQ42_04720 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D INQ42_10265 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D INQ42_01265 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D INQ42_09975 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D INQ42_09990 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D INQ42_08640 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D INQ42_03835 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D INQ42_08945 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D INQ42_00160 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D INQ42_09450 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D INQ42_09530 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D INQ42_10120 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D INQ42_06280 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D INQ42_09060 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D INQ42_06950 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D INQ42_07540 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D INQ42_06145 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D INQ42_02140 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D INQ42_12760 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D INQ42_06875 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D INQ42_07035 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D INQ42_03435 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D INQ42_02210 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D INQ42_03500 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D INQ42_04370 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D INQ42_08085 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D INQ42_01910 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D INQ42_08040 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D INQ42_07435 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D INQ42_06140 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D INQ42_08935 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D INQ42_09675 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D INQ42_03670 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D INQ42_06945 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D INQ42_11245 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D INQ42_06305 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D INQ42_03860 hflX; GTPase HflX K03665 hflX; GTPase
D INQ42_01050 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D INQ42_03180 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D INQ42_07880 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D INQ42_07895 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D INQ42_03665 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D INQ42_08950 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D INQ42_04255 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D INQ42_03830 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D INQ42_08920 ribosome-associated protein K09889 yjgA; ribosome-associated protein
D INQ42_03965 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D INQ42_02465 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D INQ42_09190 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lavi03016]
D INQ42_00235 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D INQ42_11355 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D INQ42_09515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D INQ42_10560 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D INQ42_08485 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D INQ42_08970 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D INQ42_08115 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D INQ42_10110 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D INQ42_12090 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D INQ42_07040 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D INQ42_10485 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D INQ42_08435 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D INQ42_07205 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D INQ42_04620 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D INQ42_06120 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D INQ42_05040 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D INQ42_02205 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D INQ42_05205 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D INQ42_04640 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D INQ42_04645 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D INQ42_00855 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D INQ42_01645 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D INQ42_01125 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D INQ42_09230 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D INQ42_03470 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D INQ42_08020 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D INQ42_07875 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D INQ42_03795 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D INQ42_01050 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D INQ42_03850 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D INQ42_12820 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D INQ42_12210 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D INQ42_10255 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D INQ42_12830 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D INQ42_09985 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D INQ42_08630 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D INQ42_03160 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D INQ42_04940 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D INQ42_02315 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D INQ42_12070 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D INQ42_12075 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D INQ42_04965 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D INQ42_06705 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D INQ42_01575 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D INQ42_11915 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D INQ42_04295 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D INQ42_04375 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D INQ42_03435 rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D INQ42_04795 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D INQ42_00495 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D INQ42_12170 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D INQ42_06950 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D INQ42_06375 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D INQ42_07200 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D INQ42_07830 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D INQ42_04765 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D INQ42_10400 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D INQ42_10930 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D INQ42_10405 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D INQ42_12725 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D INQ42_08155 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D INQ42_04770 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D INQ42_08885 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D INQ42_10315 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D INQ42_11395 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D INQ42_08145 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D INQ42_05910 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D INQ42_08700 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D INQ42_07865 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:lavi03012]
D INQ42_07885 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D INQ42_04625 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D INQ42_02170 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D INQ42_08790 elongation factor Ts K02357 tsf; elongation factor Ts
D INQ42_02485 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D INQ42_02550 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D INQ42_02545 fusA; elongation factor G K02355 fusA; elongation factor G
D INQ42_02420 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D INQ42_08810 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D INQ42_10085 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D INQ42_02460 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D INQ42_06400 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D INQ42_04985 efp; elongation factor P K02356 efp; elongation factor P
D INQ42_05315 yeiP; elongation factor P-like protein YeiP K02356 efp; elongation factor P
D INQ42_07500 genX; EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D INQ42_04980 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D INQ42_07045 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D INQ42_03620 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D INQ42_12165 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:lavi03110]
D INQ42_06395 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D INQ42_02155 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D INQ42_09350 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D INQ42_11765 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D INQ42_03625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D INQ42_07100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D INQ42_01960 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D INQ42_07095 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D INQ42_07475 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D INQ42_03595 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D INQ42_07105 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D INQ42_01390 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D INQ42_04385 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D INQ42_01955 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D INQ42_09110 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D INQ42_11580 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D INQ42_03840 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D INQ42_11010 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D INQ42_00470 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D INQ42_08550 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D INQ42_01235 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D INQ42_11980 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D INQ42_02705 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D INQ42_09320 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D INQ42_06985 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D INQ42_07390 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D INQ42_07395 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D INQ42_03745 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D INQ42_06755 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D INQ42_10160 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D INQ42_00935 trxA; thioredoxin K03671 TXN; thioredoxin
D INQ42_06085 thioredoxin family protein K03671 TXN; thioredoxin
D INQ42_03320 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D INQ42_08990 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D INQ42_09405 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D INQ42_02125 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D INQ42_04415 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D INQ42_11325 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D INQ42_11330 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D INQ42_02690 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D INQ42_10505 thioredoxin fold domain-containing protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D INQ42_06015 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D INQ42_06100 dsbG; thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:lavi04131]
D INQ42_06275 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D INQ42_11895 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D INQ42_03410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D INQ42_03335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D INQ42_03390 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D INQ42_03625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:lavi03051]
D INQ42_03625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:lavi03032]
D INQ42_09295 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D INQ42_09340 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D INQ42_04650 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D INQ42_06230 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D INQ42_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D INQ42_07180 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D INQ42_11415 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D INQ42_04195 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D INQ42_08870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D INQ42_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D INQ42_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D INQ42_08960 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D INQ42_09135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D INQ42_09290 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_12665 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_09245 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D INQ42_08860 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D INQ42_00735 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D INQ42_07505 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D INQ42_04040 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D INQ42_07490 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D INQ42_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D INQ42_08730 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D INQ42_03755 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D INQ42_01055 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lavi03036]
D INQ42_09090 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D INQ42_03410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D INQ42_10555 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D INQ42_09340 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D INQ42_04650 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D INQ42_06230 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D INQ42_07475 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D INQ42_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D INQ42_10360 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D INQ42_01900 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D INQ42_03855 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D INQ42_01025 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D INQ42_07515 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D INQ42_07530 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D INQ42_07535 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D INQ42_09920 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D INQ42_03780 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D INQ42_00945 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D INQ42_09965 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D INQ42_06420 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D INQ42_09970 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D INQ42_09925 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D INQ42_09945 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D INQ42_00950 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D INQ42_09915 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D INQ42_07510 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D INQ42_03110 cell division protein ZapA K09888 zapA; cell division protein ZapA
D INQ42_03115 TIGR02449 family protein K09892 zapB; cell division protein ZapB
D INQ42_12720 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D INQ42_08140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D INQ42_03420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_06905 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_09635 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D INQ42_09640 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D INQ42_09645 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D INQ42_11710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D INQ42_11705 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D INQ42_11700 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D INQ42_11690 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D INQ42_00340 ParA family protein K03496 parA; chromosome partitioning protein
D INQ42_01260 ParA family protein K03496 parA; chromosome partitioning protein
D INQ42_01255 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D INQ42_08730 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D INQ42_03755 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D INQ42_12210 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D INQ42_01265 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D INQ42_11775 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D INQ42_02175 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D INQ42_08105 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D INQ42_09870 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D INQ42_11315 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:lavi03400]
D INQ42_03510 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D INQ42_01335 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D INQ42_00975 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D INQ42_06435 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D INQ42_04705 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D INQ42_08590 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D INQ42_03330 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D INQ42_03720 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D INQ42_09890 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D INQ42_00810 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D INQ42_00720 alkB; DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D INQ42_05495 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D INQ42_09685 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D INQ42_01180 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D INQ42_00830 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D INQ42_01285 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D INQ42_07060 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D INQ42_07505 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D INQ42_00735 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D INQ42_06925 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D INQ42_08520 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D INQ42_04485 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D INQ42_07740 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D INQ42_00705 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D INQ42_02525 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D INQ42_02530 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D INQ42_02680 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D INQ42_03175 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D INQ42_09465 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D INQ42_04395 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D INQ42_08135 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D INQ42_07260 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D INQ42_08240 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D INQ42_08890 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D INQ42_08870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D INQ42_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D INQ42_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D INQ42_08960 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D INQ42_09135 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D INQ42_09290 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_12665 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D INQ42_09245 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D INQ42_04195 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D INQ42_05785 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D INQ42_05780 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D INQ42_05790 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D INQ42_10455 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D INQ42_10445 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D INQ42_10460 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D INQ42_00990 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D INQ42_07320 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D INQ42_07325 sbcD; exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D INQ42_04405 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D INQ42_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D INQ42_03190 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D INQ42_09080 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D INQ42_09235 recR; recombination protein RecR K06187 recR; recombination protein RecR
D INQ42_07110 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D INQ42_12010 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D INQ42_08060 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D INQ42_01505 Ku protein K10979 ku; DNA end-binding protein Ku
D INQ42_01510 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D INQ42_07490 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D INQ42_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D INQ42_01055 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D INQ42_09340 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D INQ42_01900 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D INQ42_04650 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D INQ42_06230 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D INQ42_10385 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D INQ42_10555 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D INQ42_05935 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D INQ42_05930 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D INQ42_08450 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D INQ42_05925 imuA; translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA
D INQ42_05920 DNA polymerase Y family protein K14161 imuB; protein ImuB
D INQ42_05915 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D INQ42_08440 recX; recombination regulator RecX K03565 recX; regulatory protein
D INQ42_01155 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D INQ42_10320 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D INQ42_05735 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D INQ42_03365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D INQ42_11575 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D INQ42_03360 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:lavi03029]
D INQ42_04310 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D INQ42_07885 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D INQ42_04625 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D INQ42_08790 elongation factor Ts K02357 tsf; elongation factor Ts
D INQ42_02485 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D INQ42_02550 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D INQ42_02545 fusA; elongation factor G K02355 fusA; elongation factor G
D INQ42_09085 era; GTPase Era K03595 era; GTPase
D INQ42_00855 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D INQ42_08970 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D INQ42_10485 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D INQ42_12090 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D INQ42_04195 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D INQ42_08835 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D INQ42_07100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D INQ42_07105 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D INQ42_01960 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D INQ42_01955 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D INQ42_07095 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D INQ42_02125 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D INQ42_04415 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D INQ42_08105 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D INQ42_11420 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D INQ42_11450 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D INQ42_11425 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D INQ42_12825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D INQ42_11435 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D INQ42_08045 SCO family protein K07152 SCO1; protein SCO1
D INQ42_10870 SCO family protein K07152 SCO1; protein SCO1
D INQ42_03625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lavi02000]
D INQ42_07765 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D INQ42_05860 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D INQ42_09010 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D INQ42_06930 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D INQ42_06995 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D INQ42_07000 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D INQ42_07005 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D INQ42_00150 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D INQ42_00145 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D INQ42_00185 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D INQ42_10535 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D INQ42_00190 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D INQ42_10545 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D INQ42_00195 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D INQ42_10540 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D INQ42_00180 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D INQ42_00175 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D INQ42_08605 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D INQ42_08610 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D INQ42_08615 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D INQ42_08620 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D INQ42_09715 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D INQ42_10670 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D INQ42_10665 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D INQ42_02190 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D INQ42_02185 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D INQ42_03975 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D INQ42_12810 ABC transporter permease K09696 natB; sodium transport system permease protein
D INQ42_12805 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D INQ42_05705 ABC transporter permease K19341 nosY; Cu-processing system permease protein
D INQ42_05700 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D INQ42_06475 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein
D INQ42_06480 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D INQ42_06485 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein
D INQ42_06490 hlyD; secretion protein HlyD K25183 ybhG; membrane fusion protein YbhG
D INQ42_05810 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D INQ42_07790 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D INQ42_05815 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D INQ42_07785 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D INQ42_06030 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D INQ42_06035 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D INQ42_06040 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D INQ42_06045 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D INQ42_00950 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D INQ42_00945 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D INQ42_07415 ABC-2 transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D INQ42_08530 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D INQ42_08535 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D INQ42_12785 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D INQ42_07410 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D INQ42_12790 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D INQ42_01540 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D INQ42_10230 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D INQ42_11645 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D INQ42_11650 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D INQ42_01535 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D INQ42_10235 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D INQ42_11640 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D INQ42_04135 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D INQ42_01005 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D INQ42_01890 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D INQ42_09015 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D INQ42_11905 nucleoside permease K11537 xapB; MFS transporter, NHS family, xanthosine permease
D INQ42_01445 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D INQ42_00835 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D INQ42_09660 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D INQ42_00285 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D INQ42_01485 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D INQ42_03935 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D INQ42_03940 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D INQ42_03945 PTS fructose IIA subunit family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D INQ42_03960 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D INQ42_03035 ion transporter K10716 kch; voltage-gated potassium channel
D INQ42_07750 kch; voltage-gated potassium channel protein K10716 kch; voltage-gated potassium channel
D INQ42_06455 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D INQ42_12455 MAPEG family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D INQ42_04320 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D INQ42_03265 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D INQ42_03270 tetratricopeptide repeat protein K07114 yfbK; Ca-activated chloride channel homolog
D INQ42_05100 VWD domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D INQ42_07545 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D INQ42_03445 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D INQ42_10390 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel
D INQ42_06690 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D INQ42_11385 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D INQ42_03925 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D INQ42_12205 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D INQ42_00040 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D INQ42_07775 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D INQ42_00045 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D INQ42_00050 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D INQ42_07770 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D INQ42_10435 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D INQ42_10430 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D INQ42_04240 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D INQ42_12470 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D INQ42_04815 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D INQ42_08595 porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D INQ42_00540 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D INQ42_02740 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D INQ42_02745 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D INQ42_00920 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D INQ42_03485 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase
D INQ42_04110 catecholate siderophore receptor Fiu K16090 fiu; catecholate siderophore receptor
D INQ42_10950 btuB; TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D INQ42_04100 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D INQ42_01700 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_02160 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_02970 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_03585 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_06110 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_06900 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_09025 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_09505 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_11340 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_12300 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_12310 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_12530 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_08460 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D INQ42_06515 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D INQ42_07710 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D INQ42_11155 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D INQ42_02040 TolC family outer membrane protein K12340 tolC; outer membrane protein
D INQ42_06915 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D INQ42_08290 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D INQ42_08835 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D INQ42_06300 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D INQ42_02135 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D INQ42_07120 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D INQ42_12190 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA
D INQ42_12195 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D INQ42_05360 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D INQ42_03980 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D INQ42_03985 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D INQ42_10155 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D INQ42_08965 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D INQ42_04250 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D INQ42_08805 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D INQ42_01475 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D INQ42_06505 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein
D INQ42_11165 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D INQ42_07720 efflux RND transporter permease subunit K07787 cusA; copper/silver efflux system protein
D INQ42_02060 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D INQ42_03425 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D INQ42_06910 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D INQ42_08635 sugE; quaternary ammonium compound efflux SMR transporter SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D INQ42_03375 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D INQ42_00310 BCCT family transporter K05020 opuD; glycine betaine transporter
D INQ42_01200 cation acetate symporter K14393 actP; cation/acetate symporter
D INQ42_06790 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D INQ42_11290 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D INQ42_05290 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D INQ42_01310 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D INQ42_02165 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter
D INQ42_00690 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D INQ42_08270 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D INQ42_01735 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D INQ42_01730 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D INQ42_01725 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D INQ42_01720 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D INQ42_01715 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D INQ42_01710 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D INQ42_08495 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D INQ42_10450 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D INQ42_12440 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D INQ42_09945 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D INQ42_11895 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D INQ42_05345 cytochrome c/FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D INQ42_00035 energy transducer TonB K03832 tonB; periplasmic protein TonB
D INQ42_06150 energy transducer TonB K03832 tonB; periplasmic protein TonB
D INQ42_10310 energy transducer TonB K03832 tonB; periplasmic protein TonB
D INQ42_12815 energy transducer TonB K03832 tonB; periplasmic protein TonB
D INQ42_10415 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D INQ42_10425 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein
D INQ42_10420 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D INQ42_02990 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D INQ42_06500 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D INQ42_11160 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D INQ42_07715 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D INQ42_02055 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D INQ42_03420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_06905 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_08300 polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D INQ42_08295 hypothetical protein K25590 epsF; protein tyrosine kinase modulator
D INQ42_01695 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D INQ42_06020 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D INQ42_01560 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D INQ42_07165 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:lavi02044]
D INQ42_02040 TolC family outer membrane protein K12340 tolC; outer membrane protein
D INQ42_02300 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D INQ42_02250 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D INQ42_10690 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D INQ42_02255 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D INQ42_10685 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D INQ42_02260 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D INQ42_02265 GspH/FimT family pseudopilin K02457 gspH; general secretion pathway protein H
D INQ42_02270 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I
D INQ42_02275 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J
D INQ42_02280 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D INQ42_02285 PilN domain-containing protein K02461 gspL; general secretion pathway protein L
D INQ42_02290 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M
D INQ42_02295 general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N
D INQ42_09880 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D INQ42_09835 pilin K02650 pilA; type IV pilus assembly protein PilA
D INQ42_09840 pilin K02650 pilA; type IV pilus assembly protein PilA
D INQ42_09865 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D INQ42_09875 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D INQ42_04470 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D INQ42_06285 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D INQ42_10300 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D INQ42_07470 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D INQ42_10295 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D INQ42_10290 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D INQ42_10285 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D INQ42_03225 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D INQ42_03230 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D INQ42_03235 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D INQ42_03240 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D INQ42_03245 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D INQ42_09700 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D INQ42_09695 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D INQ42_10715 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D INQ42_04450 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D INQ42_04455 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D INQ42_04460 pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D INQ42_04465 pilus assembly protein K02674 pilY1; type IV pilus assembly protein PilY1
D INQ42_09130 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D INQ42_04445 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D INQ42_04480 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D INQ42_08025 ferrous iron transporter B K08086 fimV; pilus assembly protein FimV
D INQ42_04065 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D INQ42_07780 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D INQ42_04545 sctJ; type III secretion inner membrane ring lipoprotein SctJ K03222 yscJ; type III secretion protein J
D INQ42_04535 hypothetical protein K03223 yscL; type III secretion protein L
D INQ42_04530 FliI/YscN family ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D INQ42_04585 sctQ; type III secretion system cytoplasmic ring protein SctQ K03225 yscQ; type III secretion protein Q
D INQ42_04590 EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R
D INQ42_04595 sctS; type III secretion system export apparatus subunit SctS K03227 yscS; type III secretion protein S
D INQ42_04600 sctT; type III secretion system export apparatus subunit SctT K03228 yscT; type III secretion protein T
D INQ42_04605 sctU; type III secretion system export apparatus subunit SctU K03229 yscU; type III secretion protein U
D INQ42_04565 sctV; type III secretion system export apparatus subunit SctV K03230 yscV; type III secretion protein V
D INQ42_04570 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D INQ42_10505 thioredoxin fold domain-containing protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D INQ42_03485 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase
D INQ42_00530 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D INQ42_00745 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D INQ42_00750 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D INQ42_00790 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D INQ42_00785 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D INQ42_00780 tssE; type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF
D INQ42_00770 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D INQ42_00765 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D INQ42_01290 tssA; type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA
D INQ42_00775 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D INQ42_00265 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D INQ42_09830 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D INQ42_00755 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D INQ42_00795 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D INQ42_00535 tagF; type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM
D INQ42_08200 protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D INQ42_09895 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D INQ42_00470 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D INQ42_04780 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D INQ42_02495 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D INQ42_04785 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D INQ42_07980 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D INQ42_02660 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D INQ42_04360 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D INQ42_04715 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D INQ42_04775 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D INQ42_12825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D INQ42_12035 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D INQ42_12040 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D INQ42_12045 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:lavi02042]
D INQ42_04815 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D INQ42_06815 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lavi02022]
D INQ42_09420 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D INQ42_09415 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D INQ42_01595 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D INQ42_01590 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D INQ42_06610 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D INQ42_06615 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D INQ42_06135 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D INQ42_11830 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR
D INQ42_02845 response regulator transcription factor K02477 K02477; two-component system, LytTR family, response regulator
D INQ42_02875 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D INQ42_02870 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D INQ42_10280 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D INQ42_10300 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D INQ42_07470 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D INQ42_10295 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D INQ42_10275 chemotaxis protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
C 02035 Bacterial motility proteins [BR:lavi02035]
D INQ42_04570 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D INQ42_10300 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D INQ42_07470 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D INQ42_10295 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D INQ42_10290 purine-binding chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D INQ42_10285 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D INQ42_10280 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D INQ42_02870 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D INQ42_02875 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D INQ42_09700 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D INQ42_09695 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D INQ42_10715 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D INQ42_10275 chemotaxis protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D INQ42_10270 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D INQ42_09835 pilin K02650 pilA; type IV pilus assembly protein PilA
D INQ42_09840 pilin K02650 pilA; type IV pilus assembly protein PilA
D INQ42_09865 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D INQ42_09875 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D INQ42_09880 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D INQ42_06285 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D INQ42_03245 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D INQ42_03240 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D INQ42_03235 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D INQ42_03230 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D INQ42_03225 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D INQ42_09130 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D INQ42_04450 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D INQ42_04455 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D INQ42_04460 pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D INQ42_04465 pilus assembly protein K02674 pilY1; type IV pilus assembly protein PilY1
D INQ42_04470 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lavi04812]
D INQ42_11710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D INQ42_09915 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D INQ42_09920 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D INQ42_09635 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D INQ42_09640 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D INQ42_09645 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D INQ42_00340 ParA family protein K03496 parA; chromosome partitioning protein
D INQ42_01260 ParA family protein K03496 parA; chromosome partitioning protein
D INQ42_01255 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lavi04147]
D INQ42_03625 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D INQ42_03410 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D INQ42_03775 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D INQ42_03335 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D INQ42_03380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D INQ42_03390 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D INQ42_09490 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D INQ42_01960 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D INQ42_07100 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D INQ42_06570 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D INQ42_06715 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D INQ42_02485 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D INQ42_02550 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D INQ42_09230 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D INQ42_06310 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D INQ42_00435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_05380 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D INQ42_09655 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D INQ42_02855 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D INQ42_03000 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D INQ42_05075 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D INQ42_05055 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D INQ42_10675 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D INQ42_00125 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D INQ42_00400 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D INQ42_00560 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D INQ42_01680 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D INQ42_06155 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D INQ42_03710 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D INQ42_05295 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D INQ42_01895 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D INQ42_02335 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_07455 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_11020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D INQ42_10575 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D INQ42_06580 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D INQ42_07985 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D INQ42_05760 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:lavi02048]
D INQ42_11105 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D INQ42_11120 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D INQ42_11125 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D INQ42_05195 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D INQ42_09855 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D INQ42_09860 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D INQ42_09915 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D INQ42_11710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D INQ42_08730 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D INQ42_03755 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D INQ42_09515 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D INQ42_07795 hypothetical protein K19168 cptA; toxin CptA
D INQ42_07800 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:lavi04090]
D INQ42_09655 M2 family metallopeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:lavi01504]
D INQ42_09605 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D INQ42_01595 two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D INQ42_01590 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D INQ42_03420 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_06905 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D INQ42_03425 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D INQ42_06910 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D INQ42_06915 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D INQ42_02050 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D INQ42_02055 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system
D INQ42_02060 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D INQ42_02040 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lavi00537]
D INQ42_03710 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D INQ42_09490 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lavi03100]
D INQ42_00865 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D INQ42_03070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D INQ42_06670 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D INQ42_04935 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D INQ42_08420 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D INQ42_12270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D INQ42_09380 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D INQ42_04885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D INQ42_04475 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D INQ42_09325 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D INQ42_09330 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D INQ42_07725 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D INQ42_10730 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D INQ42_02445 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D INQ42_06665 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D INQ42_08185 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D INQ42_07730 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D INQ42_03490 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D INQ42_02475 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D INQ42_09375 tRNA-His K14226 tRNA-His; tRNA His
D INQ42_00870 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D INQ42_03075 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D INQ42_08720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_07975 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_09365 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_05965 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_07660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D INQ42_09370 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D INQ42_10395 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D INQ42_07900 tRNA-Met K14230 tRNA-Met; tRNA Met
D INQ42_01135 tRNA-Ile K14230 tRNA-Met; tRNA Met
D INQ42_01805 tRNA-Met K14230 tRNA-Met; tRNA Met
D INQ42_04690 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D INQ42_05200 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D INQ42_04660 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D INQ42_09385 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D INQ42_08425 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D INQ42_06130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D INQ42_09280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D INQ42_09250 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D INQ42_02480 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D INQ42_01625 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D INQ42_08470 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D INQ42_02490 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D INQ42_02470 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D INQ42_09335 tRNA-Val K14237 tRNA-Val; tRNA Val
D INQ42_07640 tRNA-Val K14237 tRNA-Val; tRNA Val
D INQ42_04490 tRNA-Val K14237 tRNA-Val; tRNA Val
D INQ42_00860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D INQ42_03065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D INQ42_03080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D INQ42_00875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D INQ42_00880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D INQ42_03085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D INQ42_09255 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D INQ42_09985 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D INQ42_07145 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D INQ42_12185 NAD-dependent epimerase/dehydratase family protein K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D INQ42_11545 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D INQ42_01410 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D INQ42_00325 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D INQ42_02730 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D INQ42_02385 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D INQ42_12410 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D INQ42_10095 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D INQ42_01385 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D INQ42_11510 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D INQ42_01380 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D INQ42_11505 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D INQ42_03560 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D INQ42_05550 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D INQ42_08260 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D INQ42_10090 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D INQ42_05795 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D INQ42_02010 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D INQ42_05545 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D INQ42_08745 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D INQ42_05995 cysteine dioxygenase family protein K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D INQ42_04105 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D INQ42_05840 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D INQ42_07645 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D INQ42_02045 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D INQ42_03810 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D INQ42_01365 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D INQ42_01375 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D INQ42_12000 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D INQ42_06405 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D INQ42_09220 DUF3488 domain-containing transglutaminase family protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D INQ42_09560 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D INQ42_00510 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D INQ42_10195 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D INQ42_04080 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D INQ42_05715 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D INQ42_06635 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D INQ42_06680 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D INQ42_01990 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D INQ42_06935 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D INQ42_03955 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D INQ42_09600 alpha/beta fold hydrolase K24085 estD; esterase [EC:3.1.1.1]
D INQ42_12705 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D INQ42_08525 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D INQ42_10440 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D INQ42_00345 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D INQ42_07855 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D INQ42_12780 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D INQ42_09540 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D INQ42_11555 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D INQ42_11295 amidohydrolase family protein K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D INQ42_01075 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D INQ42_09200 maf; septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D INQ42_03250 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D INQ42_04910 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D INQ42_09210 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D INQ42_12085 alpha/beta fold hydrolase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D INQ42_08150 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D INQ42_05400 methylmalonyl-CoA mutase family protein K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D INQ42_12080 AMP-binding protein K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D INQ42_01435 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D INQ42_03005 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D INQ42_08120 rnfB; Rnf electron transport complex subunit RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D INQ42_10910 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D INQ42_11175 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D INQ42_03340 ferredoxin family protein K05524 fdxA; ferredoxin
D INQ42_08190 ferredoxin family protein K05524 fdxA; ferredoxin
D INQ42_10570 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D INQ42_09725 dodecin domain-containing protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D INQ42_09030 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D INQ42_00415 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D INQ42_06235 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A
D INQ42_06240 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D INQ42_00440 heme biosynthesis protein HemY K02498 hemY; HemY protein
D INQ42_06810 ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D INQ42_12175 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D INQ42_12180 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D INQ42_12125 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
D INQ42_05480 hypothetical protein K11056 cylK; CylK protein
D INQ42_05975 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D INQ42_11825 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D INQ42_01495 cold-shock protein K03704 cspA; cold shock protein
D INQ42_05895 cold-shock protein K03704 cspA; cold shock protein
D INQ42_09035 cold-shock protein K03704 cspA; cold shock protein
D INQ42_05835 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D INQ42_05725 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D INQ42_06390 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D INQ42_09360 trigger factor K03545 tig; trigger factor
D INQ42_07135 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D INQ42_12130 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D INQ42_06160 NfuA family Fe-S biogenesis protein K07400 nfuA; Fe/S biogenesis protein NfuA
D INQ42_06075 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D INQ42_04835 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D INQ42_00800 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D INQ42_00165 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D INQ42_10000 YraN family protein K07460 yraN; putative endonuclease
D INQ42_03650 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D INQ42_01065 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D INQ42_06430 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D INQ42_00665 transposase K07486 K07486; transposase
D INQ42_05165 IS110 family transposase K07486 K07486; transposase
D INQ42_12635 transposase K07486 K07486; transposase
D INQ42_05420 IS3 family transposase K07497 K07497; putative transposase
D INQ42_08680 IS3 family transposase K07497 K07497; putative transposase
D INQ42_11090 IS3 family transposase K07497 K07497; putative transposase
D INQ42_11180 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D INQ42_09240 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D INQ42_11475 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein
D INQ42_06185 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D INQ42_11845 MFS transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D INQ42_01670 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D INQ42_06895 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D INQ42_04825 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D INQ42_05520 putP; sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family
D INQ42_05285 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D INQ42_03430 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D INQ42_00905 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D INQ42_01855 cobalamin biosynthesis protein K03807 ampE; AmpE protein
D INQ42_02700 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D INQ42_01345 cupin domain-containing protein K07167 chrR; putative transcriptional regulator
D INQ42_04260 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D INQ42_08265 PhoH family protein K07175 phoH2; PhoH-like ATPase
D INQ42_11050 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D INQ42_06425 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D INQ42_02435 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D INQ42_00170 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D INQ42_05900 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D INQ42_03820 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D INQ42_11035 OmpW family protein K07275 ompW; outer membrane protein
D INQ42_09225 Slp family lipoprotein K07285 slp; outer membrane lipoprotein
D INQ42_03615 AsmA family protein K07290 yhjG; AsmA family protein
D INQ42_11880 NfeD family protein K07340 ybbJ; inner membrane protein
D INQ42_08540 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D INQ42_05805 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D INQ42_10240 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D INQ42_06025 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D INQ42_06005 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D INQ42_06010 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D INQ42_06290 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D INQ42_08625 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D INQ42_01815 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D INQ42_09440 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D INQ42_01940 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D INQ42_10175 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D INQ42_05695 nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D INQ42_07680 copper resistance protein B K07233 pcoB; copper resistance protein B
D INQ42_10825 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D INQ42_05710 nitrous oxide reductase accessory protein NosL K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D INQ42_02795 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D INQ42_00250 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D INQ42_05130 tRNA-binding protein K06878 K06878; tRNA-binding protein
D INQ42_03350 group III truncated hemoglobin K06886 glbN; hemoglobin
D INQ42_00140 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D INQ42_11535 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D INQ42_01845 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D INQ42_04140 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D INQ42_04130 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D INQ42_02405 YihY family inner membrane protein K07058 K07058; membrane protein
D INQ42_11410 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D INQ42_05035 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D INQ42_07025 sulfurtransferase K07146 K07146; UPF0176 protein
D INQ42_06370 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D INQ42_10210 LemA family protein K03744 lemA; LemA protein
D INQ42_11855 LemA family protein K03744 lemA; LemA protein
D INQ42_07380 SlyX family protein K03745 slyX; SlyX protein
D INQ42_01060 DUF494 family protein K03747 smg; Smg protein
D INQ42_01110 PH domain-containing protein K08981 K08981; putative membrane protein
D INQ42_06820 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D INQ42_00315 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D INQ42_01305 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D INQ42_10205 YgcG family protein K06872 K06872; uncharacterized protein
D INQ42_12005 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D INQ42_01800 hypothetical protein K06950 K06950; uncharacterized protein
D INQ42_05740 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein
D INQ42_01355 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D INQ42_06880 N-acetyltransferase K06975 K06975; uncharacterized protein
D INQ42_09630 GNAT family N-acetyltransferase K06977 K06977; uncharacterized protein
D INQ42_05135 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D INQ42_00105 C39 family peptidase K06992 K06992; uncharacterized protein
D INQ42_12715 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein
D INQ42_00380 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D INQ42_12740 UPF0149 family protein K07039 K07039; uncharacterized protein
D INQ42_01870 TIGR01777 family protein K07071 K07071; uncharacterized protein
D INQ42_11345 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D INQ42_04150 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D INQ42_09995 penicillin-binding protein activator K07121 K07121; uncharacterized protein
D INQ42_01160 sel1 repeat family protein K07126 K07126; uncharacterized protein
D INQ42_03010 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D INQ42_05025 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D INQ42_03060 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D INQ42_11405 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D INQ42_11670 DUF493 family protein K09158 K09158; uncharacterized protein
D INQ42_08130 DUF1684 domain-containing protein K09164 K09164; uncharacterized protein
D INQ42_01115 PH domain-containing protein K09167 K09167; uncharacterized protein
D INQ42_01360 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D INQ42_07525 YciI family protein K09780 K09780; uncharacterized protein
D INQ42_11795 YbaN family protein K09790 K09790; uncharacterized protein
D INQ42_10920 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D INQ42_05890 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D INQ42_10700 YdcH family protein K09794 K09794; uncharacterized protein
D INQ42_10500 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D INQ42_07125 RnfH family protein K09801 K09801; uncharacterized protein
D INQ42_05445 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D INQ42_03125 UPF0149 family protein K09895 K09895; uncharacterized protein
D INQ42_01300 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D INQ42_06555 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D INQ42_06410 N-acetyltransferase K09919 K09919; uncharacterized protein
D INQ42_06675 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D INQ42_11780 DUF484 family protein K09921 K09921; uncharacterized protein
D INQ42_10905 FixH family protein K09926 K09926; uncharacterized protein
D INQ42_11490 DUF2064 domain-containing protein K09931 K09931; uncharacterized protein
D INQ42_03875 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D INQ42_04030 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein
D INQ42_04095 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D INQ42_08910 DUF4870 domain-containing protein K09940 K09940; uncharacterized protein
D INQ42_11055 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D INQ42_08125 TraB/GumN family protein K09973 K09973; uncharacterized protein
D INQ42_04070 HutD family protein K09975 K09975; uncharacterized protein
D INQ42_06730 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D INQ42_00245 ribonuclease H-like domain-containing protein K07502 yprB; uncharacterized protein
D INQ42_04820 DUF47 family protein K07220 K07220; uncharacterized protein
D INQ42_01995 mitochondrial fission ELM1 family protein K07276 K07276; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 18, 2024