+D GENES KO #

  KEGG Orthology (KO) - Leclercia adecarboxylata

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:lax00010] D APT61_06475 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APT61_21005 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APT61_00480 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APT61_13055 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APT61_20035 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APT61_00520 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APT61_07465 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APT61_20745 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APT61_04060 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APT61_00500 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APT61_13280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APT61_10210 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APT61_04055 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D APT61_15955 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APT61_19090 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APT61_21575 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APT61_04635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APT61_08605 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APT61_12870 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APT61_12935 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APT61_18490 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APT61_18485 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_09965 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APT61_11495 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APT61_10500 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APT61_09390 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APT61_11170 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APT61_10405 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D APT61_02570 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APT61_17750 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D APT61_21475 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D APT61_20780 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APT61_15950 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APT61_14445 glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D APT61_00235 alpha-D-glucose-1-phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D APT61_16215 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APT61_13285 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D APT61_01745 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APT61_13110 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_21895 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_04795 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_04155 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_07320 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_06145 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_04370 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_06335 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APT61_13945 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APT61_05985 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_12210 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_16960 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D APT61_04800 PTS cellobiose transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:lax00020] D APT61_16130 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D APT61_09565 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D APT61_18465 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APT61_13780 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D APT61_16105 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D APT61_16100 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_16090 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APT61_16095 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APT61_16115 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APT61_16110 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APT61_16125 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APT61_16120 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APT61_20425 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APT61_20430 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APT61_20435 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D APT61_20440 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D APT61_12190 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APT61_12185 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D APT61_12850 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2] D APT61_02480 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APT61_07055 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D APT61_01745 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APT61_18490 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APT61_18485 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APT61_09965 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:lax00030] D APT61_21005 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APT61_08620 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APT61_15900 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D APT61_19965 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D APT61_07805 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D APT61_01825 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D APT61_05190 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_05195 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_04045 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_06260 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_16710 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_16715 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_06265 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D APT61_19035 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D APT61_04085 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D APT61_19155 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D APT61_00075 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D APT61_21940 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D APT61_19145 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APT61_16215 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APT61_20700 ribose-phosphate pyrophosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D APT61_09170 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D APT61_08625 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D APT61_08630 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D APT61_18435 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D APT61_10320 glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D APT61_21355 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APT61_01605 gntK; gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D APT61_01205 ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D APT61_21345 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D APT61_07465 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APT61_20745 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APT61_04060 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APT61_20035 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APT61_00520 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APT61_00480 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APT61_13055 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:lax00040] D APT61_15895 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D APT61_22190 pectate lyase K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9] D APT61_04295 oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6] D APT61_04315 oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6] D APT61_04340 cupin K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D APT61_04300 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D APT61_04305 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D APT61_13080 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D APT61_03065 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D APT61_11445 altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D APT61_03070 altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D APT61_07170 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D APT61_11720 bifunctional D-altronate/D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D APT61_03865 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D APT61_11705 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D APT61_11715 oxidoreductase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380] D APT61_19415 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APT61_07810 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APT61_09375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_07755 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_20245 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APT61_20240 xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APT61_20235 araD; ribulose phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APT61_18845 araD; ribulose phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APT61_01825 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D APT61_18840 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D APT61_18835 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D APT61_21400 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D APT61_07500 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D APT61_21405 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D APT61_00435 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D APT61_00425 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D APT61_07495 D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D APT61_20740 sugar ABC transporter K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15] D APT61_19885 dehydratase K22396 yjhG; xylonate dehydratase [EC:4.2.1.82] D APT61_19890 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] D APT61_07475 ribulokinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47] D APT61_07480 glucose dehydrogenase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56] C 00051 Fructose and mannose metabolism [PATH:lax00051] D APT61_17530 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APT61_12195 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D APT61_07725 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D APT61_07720 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APT61_07700 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D APT61_07705 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D APT61_00430 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D APT61_00435 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D APT61_00425 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D APT61_08025 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D APT61_00480 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APT61_13055 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APT61_20035 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APT61_00520 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APT61_21515 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D APT61_07195 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D APT61_21405 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D APT61_07495 D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D APT61_11230 poly(beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D APT61_07465 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APT61_20745 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APT61_04060 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APT61_00500 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APT61_14600 allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-] D APT61_14605 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D APT61_14610 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D APT61_14615 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APT61_07200 PTS fructose transporter subunit EIIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APT61_08805 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APT61_08800 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D APT61_08795 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D APT61_21510 PTS mannitol transporter subunit IIABC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APT61_06805 phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D APT61_13075 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] C 00052 Galactose metabolism [PATH:lax00052] D APT61_15950 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D APT61_15945 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APT61_15940 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D APT61_15935 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APT61_20560 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APT61_09375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_07755 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_16215 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APT61_06475 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APT61_17195 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APT61_09140 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D APT61_00385 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D APT61_00480 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APT61_13055 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APT61_17495 alpha-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:lax00053] D APT61_19415 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APT61_07810 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APT61_07815 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D APT61_20250 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APT61_14585 cmtB; PTS mannitol transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APT61_20255 PTS L-ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APT61_14590 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APT61_20260 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D APT61_14595 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component D APT61_20265 L-ascorbate-6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-] D APT61_20245 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D APT61_20240 xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D APT61_20235 araD; ribulose phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APT61_18845 araD; ribulose phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D APT61_04600 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D APT61_02935 5-keto-4-deoxy-D-glucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D APT61_02925 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] C 00500 Starch and sucrose metabolism [PATH:lax00500] D APT61_05835 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D APT61_17495 alpha-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D APT61_09375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_07755 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_07365 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D APT61_03190 hypothetical protein K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D APT61_13120 PTS N N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_21900 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_21185 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_13130 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_21885 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_21180 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_04365 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_13125 PTS N N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_21890 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_19235 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_13110 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_21895 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_04795 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_04155 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_07320 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_06145 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_04370 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D APT61_01635 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D APT61_01640 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D APT61_01625 glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D APT61_01645 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APT61_01675 maltose phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D APT61_01630 glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D APT61_21435 malS; alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D APT61_08130 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D APT61_01680 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D APT61_07790 glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D APT61_09730 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D APT61_06335 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APT61_05985 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_12210 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_05980 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D APT61_11255 glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68] D APT61_11250 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D APT61_11245 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D APT61_08385 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D APT61_08380 trehalose phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D APT61_01250 treF; alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D APT61_19940 PTS maltose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APT61_19945 glucohydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D APT61_16215 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APT61_06475 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APT61_21005 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APT61_17530 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lax00520] D APT61_15170 glycoside hydrolase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D APT61_13915 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D APT61_19925 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D APT61_06335 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APT61_16260 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APT61_04815 PTS N-acetyl-D-glucosamine transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APT61_13855 N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D APT61_16270 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D APT61_16265 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D APT61_17530 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D APT61_22180 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APT61_02780 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D APT61_22185 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D APT61_05830 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D APT61_12610 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D APT61_02705 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APT61_01180 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APT61_05460 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60] D APT61_05455 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D APT61_05445 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D APT61_00860 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APT61_00865 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D APT61_14670 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D APT61_19875 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D APT61_13945 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APT61_05985 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_12210 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_16960 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D APT61_06475 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APT61_16215 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APT61_09375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_07755 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_19415 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APT61_07810 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APT61_15945 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APT61_15940 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D APT61_15935 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APT61_20560 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APT61_07815 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D APT61_08805 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APT61_08800 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D APT61_08795 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D APT61_21005 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APT61_12195 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D APT61_07725 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D APT61_07720 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APT61_07700 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D APT61_07705 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D APT61_01635 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:lax00620] D APT61_20780 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APT61_09965 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APT61_18490 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APT61_18485 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_02985 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APT61_14995 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APT61_09390 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APT61_11170 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APT61_10405 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D APT61_10500 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APT61_02570 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APT61_17750 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APT61_06790 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D APT61_06785 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APT61_08605 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APT61_12870 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APT61_18180 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APT61_02375 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APT61_02370 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APT61_06695 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APT61_14715 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D APT61_21475 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D APT61_21540 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D APT61_11495 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APT61_15145 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D APT61_09980 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D APT61_07360 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D APT61_10190 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D APT61_19660 bleomycin resistance protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D APT61_12675 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D APT61_18040 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D APT61_14880 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D APT61_14270 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APT61_21355 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APT61_11195 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D APT61_06270 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D APT61_02480 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APT61_07055 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D APT61_12190 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D APT61_12185 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D APT61_12850 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2] D APT61_20425 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APT61_20430 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APT61_20435 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D APT61_20440 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D APT61_00665 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D APT61_01745 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D APT61_12935 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APT61_21075 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_18680 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D APT61_14485 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lax00630] D APT61_21070 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D APT61_20780 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APT61_21075 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D APT61_02480 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APT61_16130 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D APT61_09565 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D APT61_18465 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_13100 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D APT61_14270 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APT61_21355 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APT61_01830 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D APT61_00180 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APT61_05880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APT61_04145 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APT61_04135 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_04140 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D APT61_02940 garR; 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D APT61_14685 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D APT61_04605 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APT61_02945 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APT61_10190 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D APT61_08630 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D APT61_00345 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APT61_00350 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APT61_00340 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D APT61_00335 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D APT61_09355 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:lax00640] D APT61_20780 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APT61_06790 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D APT61_02980 propionate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15] D APT61_06785 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_02985 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APT61_14995 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APT61_02395 quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APT61_18180 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APT61_02375 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APT61_02370 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APT61_06695 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APT61_19770 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APT61_16095 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APT61_16090 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APT61_18465 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D APT61_11495 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APT61_14740 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D APT61_03715 aldehyde reductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D APT61_00620 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:lax00650] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_10060 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_09390 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APT61_16115 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APT61_16110 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APT61_16125 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APT61_16120 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APT61_20425 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APT61_20430 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APT61_20435 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D APT61_20440 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D APT61_19770 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APT61_19515 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_19765 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_02455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_11480 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D APT61_00220 gamma-hydroxybutyrate dehydrogenase K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373] D APT61_02985 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APT61_14995 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D APT61_09965 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D APT61_21955 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_00780 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_18670 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_21950 acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APT61_18665 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APT61_00785 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:lax00660] D APT61_21955 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_00780 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_18670 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_21950 acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APT61_18665 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APT61_00785 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APT61_16095 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D APT61_16090 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D APT61_18690 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D APT61_18695 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D APT61_18685 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:lax00562] D APT61_05910 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D APT61_14640 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D APT61_00500 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:lax00190] D APT61_06830 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D APT61_06835 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D APT61_06840 NADH:ubiquinone oxidoreductase K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D APT61_06845 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D APT61_06850 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D APT61_06855 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D APT61_06860 NADH:ubiquinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D APT61_06865 NADH dehydrogenase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D APT61_06870 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D APT61_06875 NADH:ubiquinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D APT61_06880 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D APT61_06885 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D APT61_06890 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D APT61_13905 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D APT61_11160 pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D APT61_16115 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APT61_16110 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APT61_16125 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D APT61_16120 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D APT61_20425 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APT61_20430 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APT61_20435 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D APT61_20440 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D APT61_17365 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D APT61_17360 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D APT61_17355 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D APT61_17350 cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D APT61_17345 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D APT61_05345 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APT61_10645 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APT61_16070 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APT61_05340 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APT61_10640 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APT61_16065 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APT61_16060 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D APT61_22210 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D APT61_22200 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D APT61_22205 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D APT61_22215 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D APT61_22195 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D APT61_00005 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APT61_22220 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D APT61_22225 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D APT61_20070 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D APT61_11175 pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D APT61_06130 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D APT61_11110 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:lax00680] D APT61_10500 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APT61_07235 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D APT61_00345 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APT61_00350 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D APT61_00340 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D APT61_00335 formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma D APT61_20760 spermidine/putrescine ABC transporter substrate-binding protein K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D APT61_20765 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D APT61_05080 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D APT61_05060 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D APT61_05075 spermidine/putrescine ABC transporter substrate-binding protein K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D APT61_05880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APT61_04635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APT61_00665 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D APT61_02480 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APT61_07465 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D APT61_20745 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APT61_04060 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D APT61_20035 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APT61_00520 fructose 1,6-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D APT61_00480 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APT61_13055 6-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D APT61_06790 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D APT61_06785 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APT61_20780 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APT61_12935 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D APT61_15955 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APT61_19090 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APT61_21575 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APT61_04090 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APT61_14975 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APT61_19125 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:lax00910] D APT61_09290 nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APT61_11010 nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APT61_09250 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D APT61_09255 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D APT61_09260 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D APT61_09295 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APT61_11005 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APT61_09300 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APT61_11000 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APT61_09310 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APT61_10990 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APT61_09270 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D APT61_09265 nitrite reductase K00361 nasB; nitrite reductase [NAD(P)H] [EC:1.7.1.4] D APT61_01855 nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D APT61_01850 nirD; nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D APT61_15130 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D APT61_13235 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APT61_00180 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APT61_02545 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APT61_02540 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D APT61_05165 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APT61_18425 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D APT61_12825 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D APT61_02350 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:lax00920] D APT61_06305 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APT61_00485 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APT61_06310 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D APT61_06315 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D APT61_06320 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APT61_17665 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D APT61_17655 taurine transporter subunit K15552 tauC; taurine transport system permease protein D APT61_17660 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APT61_17650 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D APT61_14835 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D APT61_14845 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D APT61_14850 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APT61_14840 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D APT61_14830 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D APT61_04700 cysN; sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APT61_04695 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APT61_04705 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D APT61_20115 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D APT61_04665 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D APT61_04655 cysJ; sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D APT61_04660 sulfite reductase subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D APT61_14530 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A D APT61_14540 tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B D APT61_14535 tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C D APT61_05975 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APT61_01655 glpE; thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D APT61_21550 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D APT61_17270 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D APT61_06350 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D APT61_21080 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D APT61_00600 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APT61_15025 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D APT61_15020 dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D APT61_11750 dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D APT61_15015 dimethyl sulfoxide reductase K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:lax00061] D APT61_18180 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D APT61_02375 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D APT61_02370 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D APT61_06695 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D APT61_13980 acyl carrier protein K02078 acpP; acyl carrier protein D APT61_01395 acyl carrier protein K02078 acpP; acyl carrier protein D APT61_01400 acyl carrier protein K02078 acpP; acyl carrier protein D APT61_13990 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APT61_13995 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D APT61_01350 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APT61_06660 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APT61_13975 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APT61_01335 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APT61_09025 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_13985 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_01340 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_06100 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_16580 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_14785 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D APT61_18205 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APT61_09635 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APT61_08860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:lax00071] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_01120 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_06605 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_18010 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D APT61_08860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D APT61_04390 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D APT61_10500 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APT61_09390 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APT61_11170 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APT61_10405 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:lax00561] D APT61_04605 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APT61_02945 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D APT61_17750 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D APT61_00620 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D APT61_00525 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D APT61_16725 carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D APT61_20955 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APT61_14000 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D APT61_03510 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APT61_03690 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D APT61_20950 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D APT61_00385 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:lax00564] D APT61_21555 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D APT61_01650 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D APT61_06965 glycerol-3-phosphate dehydrogenase, anaerobic, A subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D APT61_06960 anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D APT61_06955 glpC; glycerol-3-phosphate dehydrogenase, anaerobic, C subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D APT61_20955 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APT61_03510 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APT61_03690 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D APT61_20950 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D APT61_01010 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D APT61_01030 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D APT61_01570 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D APT61_06975 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D APT61_04390 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D APT61_00490 CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D APT61_18230 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D APT61_05715 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D APT61_20400 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D APT61_08215 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D APT61_09575 phosphatidylglycerophosphatase K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D APT61_05840 hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D APT61_01320 HAD family hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D APT61_09430 cls; cardiolipin synthase A K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D APT61_15785 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D APT61_14210 hypothetical protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:lax00565] D APT61_01010 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:lax00600] D APT61_17195 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APT61_00385 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D APT61_19925 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism D APT61_01010 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D APT61_01010 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:lax00592] D APT61_01010 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D APT61_01120 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_06605 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:lax01040] D APT61_17030 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D APT61_17240 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D APT61_09450 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:lax00230] D APT61_03605 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D APT61_01770 nudE; adenosine nucleotide hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D APT61_19145 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D APT61_16215 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APT61_09170 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D APT61_06715 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D APT61_21110 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D APT61_06135 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D APT61_08635 phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D APT61_05850 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D APT61_06140 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D APT61_17005 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D APT61_17000 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D APT61_06200 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D APT61_13805 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D APT61_21105 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APT61_17135 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D APT61_17085 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APT61_04735 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APT61_16280 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APT61_01760 GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D APT61_17100 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D APT61_19140 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D APT61_17540 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D APT61_05665 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D APT61_18430 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D APT61_06075 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D APT61_06000 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APT61_19095 yjjX; inositol monophosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D APT61_03960 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D APT61_17940 xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D APT61_17855 xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D APT61_17850 xanthine dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D APT61_17845 aldehyde oxidoreductase K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D APT61_06080 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D APT61_18545 guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D APT61_21735 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D APT61_05100 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APT61_06990 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APT61_05095 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APT61_06985 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APT61_19950 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D APT61_18295 dgt; dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D APT61_06815 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D APT61_21745 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D APT61_00830 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D APT61_06125 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D APT61_04620 relA; (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D APT61_00955 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D APT61_20320 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D APT61_12520 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D APT61_07925 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D APT61_04555 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D APT61_20120 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D APT61_17110 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D APT61_04625 mazG; nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APT61_03615 diguanylate phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D APT61_11265 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D APT61_18895 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D APT61_04705 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D APT61_04700 cysN; sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APT61_04695 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APT61_21840 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D APT61_03485 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D APT61_03490 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D APT61_03495 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D APT61_05165 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:lax00240] D APT61_18930 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D APT61_18935 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D APT61_19905 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D APT61_19910 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D APT61_14140 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D APT61_19980 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D APT61_14825 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D APT61_21705 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D APT61_09590 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D APT61_18250 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D APT61_06000 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APT61_04625 mazG; nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APT61_02420 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D APT61_03090 metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D APT61_04630 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D APT61_14965 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D APT61_13225 NTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65] D APT61_07635 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D APT61_17085 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APT61_04735 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APT61_16280 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APT61_19190 dUMP phosphatase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D APT61_01060 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D APT61_17540 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D APT61_06150 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D APT61_20120 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D APT61_16375 rihA; ribonucleoside hydrolase K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D APT61_04555 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D APT61_07280 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D APT61_01860 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D APT61_19950 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D APT61_07640 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D APT61_05100 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APT61_06990 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APT61_05095 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APT61_06985 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APT61_06815 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D APT61_13960 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D APT61_21695 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D APT61_19150 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D APT61_09385 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D APT61_04430 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D APT61_11025 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D APT61_14385 pyrimidine utilization protein A K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46] D APT61_09035 flavin reductase K09024 rutF; flavin reductase [EC:1.5.1.-] D APT61_14410 FMN reductase K09024 rutF; flavin reductase [EC:1.5.1.-] D APT61_14390 pyrimidine utilization protein B K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110] D APT61_14395 pyrimidine utilization protein C K09021 rutC; aminoacrylate peracid reductase D APT61_14400 pyrimidine utilization protein D K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-] D APT61_11685 NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D APT61_14405 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:lax00250] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APT61_05760 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D APT61_13260 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APT61_15555 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APT61_00035 asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D APT61_16285 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D APT61_18015 carbon-nitrogen hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D APT61_06820 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APT61_20505 aspA; class II fumarate hydratase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D APT61_02795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APT61_00685 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APT61_20320 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D APT61_13805 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D APT61_19905 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D APT61_19910 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D APT61_19770 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APT61_19515 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_19765 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_02455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_11480 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D APT61_02545 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APT61_02540 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D APT61_13235 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APT61_14370 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APT61_00180 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APT61_18930 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D APT61_18935 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D APT61_11470 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D APT61_22180 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APT61_06715 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:lax00260] D APT61_21010 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D APT61_19065 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APT61_00605 metL; bifunctional aspartokinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APT61_01620 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APT61_19060 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D APT61_19055 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D APT61_15150 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D APT61_05880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APT61_14270 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D APT61_21355 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D APT61_04605 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APT61_02945 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D APT61_15955 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APT61_19090 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APT61_21575 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D APT61_04090 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APT61_14975 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APT61_19125 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D APT61_11685 NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D APT61_21600 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D APT61_21595 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D APT61_10015 tynA; tyramine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D APT61_04145 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APT61_04135 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_04140 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D APT61_05715 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D APT61_18770 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D APT61_04545 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APT61_08820 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APT61_00800 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APT61_02970 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APT61_21990 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D APT61_04345 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D APT61_09485 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D APT61_09490 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D APT61_07445 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D APT61_07440 2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] C 00270 Cysteine and methionine metabolism [PATH:lax00270] D APT61_21550 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D APT61_17270 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D APT61_06350 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D APT61_03730 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APT61_12215 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APT61_17770 homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D APT61_21050 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APT61_01050 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D APT61_10455 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D APT61_04025 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APT61_18455 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D APT61_18450 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D APT61_18300 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D APT61_16550 methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D APT61_05665 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D APT61_16545 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D APT61_16530 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D APT61_16535 haloacid dehalogenase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D APT61_16540 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D APT61_20890 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APT61_08720 Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D APT61_07995 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APT61_04915 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D APT61_21010 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D APT61_19065 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APT61_00605 metL; bifunctional aspartokinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APT61_01620 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APT61_21080 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D APT61_00600 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APT61_00790 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APT61_04910 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D APT61_04000 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APT61_05975 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APT61_11495 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APT61_04345 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D APT61_08180 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D APT61_02480 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D APT61_04545 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APT61_08820 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D APT61_06325 cysM; cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D APT61_04090 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APT61_14975 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:lax00280] D APT61_00790 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APT61_01120 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_06605 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D APT61_19770 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lax00290] D APT61_00800 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APT61_02970 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D APT61_18690 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D APT61_18695 leuD; isopropylmalate isomerase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D APT61_18685 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D APT61_21955 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_00780 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_18670 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_21950 acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APT61_18665 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APT61_00785 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APT61_00810 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D APT61_00795 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D APT61_00790 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APT61_21440 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D APT61_06820 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APT61_18680 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D APT61_14485 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:lax00300] D APT61_21010 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D APT61_19065 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APT61_00605 metL; bifunctional aspartokinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APT61_01620 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APT61_17810 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APT61_11520 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APT61_10245 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APT61_06190 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APT61_18940 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D APT61_18275 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D APT61_01885 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APT61_06225 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D APT61_00970 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D APT61_11370 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D APT61_04355 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D APT61_11330 GntR family transcriptional regulator K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D APT61_18635 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APT61_18630 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:lax00310] D APT61_16100 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_04345 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D APT61_18175 lysine decarboxylase LdcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D APT61_03145 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APT61_10690 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APT61_19745 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APT61_19770 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APT61_19515 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_19765 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_02455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_19755 carbon starvation induced protein K15737 csiD; glutarate dioxygenase [EC:1.14.11.64] D APT61_19760 hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D APT61_10525 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D APT61_12920 hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:lax00220] D APT61_19860 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D APT61_02795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APT61_00685 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APT61_11770 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D APT61_11765 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D APT61_03485 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D APT61_03490 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D APT61_03495 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D APT61_11470 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D APT61_00180 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APT61_18930 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D APT61_18935 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D APT61_05165 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D APT61_13235 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APT61_06820 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APT61_04475 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D APT61_00680 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D APT61_00675 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D APT61_01885 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APT61_00670 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:lax00330] D APT61_01860 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D APT61_04030 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D APT61_04035 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D APT61_03910 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APT61_18450 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D APT61_18455 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D APT61_03145 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D APT61_10690 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APT61_19745 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APT61_08995 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D APT61_12770 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D APT61_13175 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D APT61_13165 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D APT61_13180 acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D APT61_13170 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D APT61_13160 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D APT61_17805 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D APT61_17565 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D APT61_14370 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APT61_17920 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D APT61_17915 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:lax00340] D APT61_07860 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D APT61_07825 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D APT61_07835 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D APT61_07840 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D APT61_07830 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D APT61_07845 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D APT61_07850 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APT61_07855 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D APT61_15870 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D APT61_15875 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D APT61_15890 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D APT61_15885 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:lax00350] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APT61_07850 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APT61_20890 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APT61_10015 tynA; tyramine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D APT61_10010 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D APT61_10500 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APT61_09390 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APT61_11170 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APT61_10405 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D APT61_19365 Pyoverdin chromophore biosynthetic protein pvcC K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D APT61_19370 hpaC; 4-hydroxyphenylacetate 3-monooxygenase K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D APT61_19315 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D APT61_19310 2-hydroxymuconic semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D APT61_19320 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D APT61_19305 4-hydroxyphenylacetate degradation protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D APT61_19325 2-oxo-hepta-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D APT61_19330 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D APT61_12815 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D APT61_19515 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_19765 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_02455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:lax00360] D APT61_10015 tynA; tyramine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D APT61_10010 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D APT61_10075 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D APT61_10065 acyl-CoA thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D APT61_10025 paaA; AAA family ATPase K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D APT61_10030 paaB; phenylacetate-CoA oxygenase subunit PaaB K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D APT61_10035 phenylacetic acid degradation protein K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D APT61_10040 phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D APT61_10045 phenylacetic acid degradation protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D APT61_10055 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D APT61_10020 enoyl-CoA hydratase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D APT61_10070 beta-ketoadipyl CoA thiolase K02615 paaJ; 3-oxo-5,6-didehydrosuberyl-CoA/3-oxoadipyl-CoA thiolase [EC:2.3.1.223 2.3.1.174] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_10060 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APT61_07850 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APT61_20890 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APT61_01585 acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D APT61_08920 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D APT61_00615 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D APT61_08995 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D APT61_12770 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:lax00380] D APT61_16100 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_22105 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D APT61_06465 indolepyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74] D APT61_08995 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D APT61_12770 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D APT61_11295 indole acetimide hydrolase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-] D APT61_13100 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D APT61_00615 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lax00400] D APT61_05630 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APT61_12945 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APT61_15960 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APT61_01810 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D APT61_02380 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D APT61_02245 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D APT61_15515 quinate dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D APT61_10515 glucose dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D APT61_17555 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D APT61_01805 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D APT61_14970 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D APT61_06630 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D APT61_09505 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D APT61_09500 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] D APT61_09495 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D APT61_09485 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D APT61_09490 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D APT61_05635 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D APT61_05645 pheA; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APT61_07850 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APT61_20890 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:lax00410] D APT61_18400 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D APT61_19770 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APT61_10015 tynA; tyramine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D APT61_10690 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APT61_19745 gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D APT61_18395 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D APT61_11025 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00430 Taurine and hypotaurine metabolism [PATH:lax00430] D APT61_01580 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APT61_17650 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D APT61_06785 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D APT61_06790 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:lax00440] D APT61_20705 aminoalkylphosphonic acid N-acetyltransferase K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280] D APT61_20675 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D APT61_20665 phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D APT61_20670 phnH; carbon-phosphorus lyase subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D APT61_20690 phosphonate ABC transporter ATP-binding protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D APT61_20695 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D APT61_20680 carbon-phosphorus lyase complex subunit PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D APT61_20710 phnP; phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:lax00450] D APT61_00600 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D APT61_03730 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APT61_12215 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APT61_21050 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APT61_01050 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D APT61_10455 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D APT61_12890 cysteine sulfinate desulfinase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D APT61_15055 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D APT61_11745 dimethyl sulfoxide reductase subunit A K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9] D APT61_04700 cysN; sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APT61_04695 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APT61_13245 selenide,water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D APT61_19975 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D APT61_21490 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D APT61_07410 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:lax00460] D APT61_07365 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D APT61_01580 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APT61_13260 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D APT61_15555 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APT61_00035 asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D APT61_05880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:lax00470] D APT61_08925 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APT61_20895 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APT61_17600 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APT61_18600 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APT61_04345 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D APT61_11470 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D APT61_00720 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D APT61_18620 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APT61_09770 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D APT61_21990 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D APT61_08180 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D APT61_00970 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D APT61_11370 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D APT61_04355 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D APT61_08920 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:lax00480] D APT61_01580 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APT61_09225 transporter K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D APT61_16155 lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D APT61_16165 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D APT61_16160 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D APT61_16805 gamma-glutamyl ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D APT61_04910 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D APT61_04000 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D APT61_02590 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D APT61_05960 aminopeptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D APT61_14855 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D APT61_17945 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D APT61_20835 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_15450 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_06770 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_12585 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_11985 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_01270 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D APT61_13780 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D APT61_07805 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D APT61_08620 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APT61_13000 btuE; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D APT61_11970 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D APT61_03910 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D APT61_18450 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:lax00511] D APT61_17195 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D APT61_19925 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D APT61_10090 glycoside hydrolase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25] C 00540 Lipopolysaccharide biosynthesis [PATH:lax00540] D APT61_18200 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D APT61_18580 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D APT61_18210 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D APT61_16985 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D APT61_18195 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D APT61_14940 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D APT61_02665 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APT61_09210 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D APT61_02660 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D APT61_14925 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D APT61_21655 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D APT61_14175 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D APT61_08600 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D APT61_07155 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D APT61_12660 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APT61_21300 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APT61_16475 pagP; phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APT61_06500 lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D APT61_18005 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D APT61_03545 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D APT61_18105 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D APT61_21605 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D APT61_21615 ADP-heptose--LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D APT61_21610 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D APT61_21620 heptosyltransferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D APT61_21640 glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D APT61_21625 glycosyl transferase family 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis [PATH:lax00542] D APT61_00850 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lax00541] D APT61_09375 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_07755 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D APT61_15935 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APT61_20560 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D APT61_19415 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APT61_07810 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D APT61_07815 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D APT61_19450 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APT61_07770 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APT61_19440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APT61_07760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APT61_19455 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D APT61_19445 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D APT61_07765 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D APT61_00875 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D APT61_00870 TDP-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D APT61_12195 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D APT61_07725 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D APT61_07720 cpsB; mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D APT61_07700 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D APT61_07705 GDP-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D APT61_22185 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D APT61_00860 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APT61_00865 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:lax00550] D APT61_02705 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APT61_01180 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APT61_18605 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D APT61_18620 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APT61_18635 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APT61_17600 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APT61_18600 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APT61_18630 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D APT61_18235 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D APT61_03520 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APT61_15435 UDP pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APT61_18625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APT61_18610 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D APT61_02615 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D APT61_01775 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APT61_18350 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APT61_05995 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APT61_16415 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APT61_08775 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APT61_18640 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APT61_07885 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_15445 peptidase M15 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_16430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_02750 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:lax00552] D APT61_03520 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APT61_15435 UDP pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APT61_00850 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:lax00543] D APT61_07730 UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D APT61_07715 colanic acid biosynthesis glycosyltransferase WcaI K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI D APT61_07695 colanic acid biosynthesis acetyltransferase WcaF K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D APT61_07690 colanic acid biosynthesis glycosyltransferase WcaE K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D APT61_07680 colanic acid biosynthesis glycosyltransferase WcaC K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D APT61_07675 colanic acid biosynthesis acetyltransferase WcaB K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-] D APT61_07670 colanic acid biosynthesis glycosyltransferase WcaA K25875 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA D APT61_07745 colanic acid biosynthesis glycosyltransferase WcaL K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D APT61_07740 colanic acid biosynthesis pyruvyl transferase WcaK K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ D APT61_00850 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D APT61_00895 UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D APT61_00885 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D APT61_11895 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D APT61_11890 poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD D APT61_21550 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:lax00730] D APT61_21150 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D APT61_07460 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D APT61_21160 molybdopterin biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D APT61_05925 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APT61_17390 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APT61_21175 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D APT61_17405 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D APT61_21170 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D APT61_07455 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D APT61_21155 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D APT61_17415 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D APT61_20395 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D APT61_17580 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APT61_13920 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89] D APT61_17110 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:lax00740] D APT61_09570 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APT61_17430 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D APT61_15420 sugar-phosphatase K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D APT61_00985 flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D APT61_03555 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D APT61_17425 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D APT61_12725 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D APT61_18975 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D APT61_20885 aphA; acid phosphatase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2] D APT61_19370 hpaC; 4-hydroxyphenylacetate 3-monooxygenase K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D APT61_01115 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D APT61_14830 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D APT61_15525 NADPH-dependent oxidoreductase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] D APT61_07455 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D APT61_03605 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D APT61_13790 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D APT61_06720 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APT61_17835 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:lax00750] D APT61_12600 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D APT61_06330 pdxK; pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D APT61_12590 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D APT61_11935 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D APT61_04050 gapA; glyceraldehyde-3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D APT61_06675 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D APT61_14975 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APT61_18880 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D APT61_05810 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D APT61_19055 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:lax00760] D APT61_05760 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D APT61_15980 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D APT61_18525 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D APT61_14860 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D APT61_19140 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D APT61_19115 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D APT61_17085 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D APT61_04735 surE; stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D APT61_16280 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D APT61_16400 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D APT61_04625 mazG; nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APT61_21140 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D APT61_13140 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D APT61_04850 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D APT61_13265 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D APT61_13850 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D APT61_05560 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D APT61_00695 pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D APT61_12130 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D APT61_12125 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D APT61_19515 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_19765 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_02455 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D APT61_11480 succinate dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:lax00770] D APT61_21955 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_00780 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_18670 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D APT61_21950 acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APT61_18665 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D APT61_00785 ilvM; acetolactate synthase 2 regulatory subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D APT61_00810 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D APT61_00795 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D APT61_18390 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D APT61_17380 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D APT61_18395 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D APT61_21255 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D APT61_21690 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D APT61_04625 mazG; nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D APT61_21665 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D APT61_18550 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D APT61_05815 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D APT61_01330 ACP synthase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D APT61_17485 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D APT61_00790 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APT61_11025 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D APT61_18400 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:lax00780] D APT61_15845 malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D APT61_01350 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APT61_06660 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APT61_13975 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APT61_01335 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APT61_09025 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_13985 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_01340 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_06100 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_16580 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_18205 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APT61_09635 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APT61_01700 pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D APT61_15850 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APT61_15860 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D APT61_15840 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D APT61_12020 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D APT61_15855 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D APT61_01185 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D APT61_21325 trimethylamine N-oxide reductase I catalytic subunit K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:lax00785] D APT61_16440 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D APT61_16450 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D APT61_19135 lplA; lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_18490 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D APT61_18485 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D APT61_16105 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D APT61_16100 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D APT61_04145 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D APT61_04135 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APT61_04140 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:lax00790] D APT61_07245 folE; type I GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D APT61_17580 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APT61_08555 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D APT61_03515 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D APT61_18385 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D APT61_02775 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D APT61_18900 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D APT61_06700 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D APT61_09570 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APT61_01880 anthranilate synthase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D APT61_08830 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D APT61_13970 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D APT61_06760 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D APT61_12145 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D APT61_04650 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D APT61_04645 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D APT61_17285 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D APT61_04560 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D APT61_15820 moaA; cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D APT61_15810 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D APT61_15800 moaE; molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D APT61_19030 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D APT61_15815 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D APT61_15560 molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D APT61_17865 molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D APT61_00125 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:lax00670] D APT61_18900 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D APT61_12145 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D APT61_16950 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D APT61_05880 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D APT61_06135 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D APT61_21105 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APT61_02215 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D APT61_04135 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D APT61_21050 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D APT61_04430 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D APT61_09355 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D APT61_00610 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D APT61_04095 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:lax00860] D APT61_06415 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APT61_09185 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D APT61_18325 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D APT61_17640 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D APT61_00950 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D APT61_00945 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D APT61_21135 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D APT61_06275 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D APT61_00165 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D APT61_01145 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D APT61_17105 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D APT61_00940 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D APT61_04690 sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D APT61_01840 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D APT61_17365 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D APT61_09535 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D APT61_02045 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lax00130] D APT61_20965 ubiC; chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D APT61_20960 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D APT61_01110 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D APT61_06720 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APT61_17835 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APT61_04125 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D APT61_06995 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D APT61_04120 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D APT61_01070 ubiE; ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D APT61_16325 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D APT61_06915 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D APT61_16630 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D APT61_06920 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D APT61_06925 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D APT61_06935 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D APT61_06940 2-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D APT61_06930 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D APT61_12915 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D APT61_00555 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D APT61_11120 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D APT61_14430 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D APT61_20175 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D APT61_18725 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:lax00900] D APT61_17405 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D APT61_18240 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D APT61_04720 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D APT61_09175 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D APT61_04725 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D APT61_06015 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D APT61_18955 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_06720 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APT61_17835 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APT61_04220 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D APT61_15385 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D APT61_17400 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D APT61_15390 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D APT61_02715 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D APT61_18235 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:lax00906] D APT61_15370 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D APT61_15375 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D APT61_15380 lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] D APT61_15365 beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] D APT61_04640 zeaxanthin glucosyltransferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:lax00907] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APT61_02570 alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D APT61_01120 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_06605 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D APT61_05190 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_05195 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_04045 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_06260 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_16710 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D APT61_16715 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:lax00523] D APT61_19450 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APT61_07770 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APT61_19440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APT61_07760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APT61_19455 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D APT61_19445 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D APT61_07765 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:lax01053] D APT61_06915 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D APT61_16630 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D APT61_16620 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D APT61_16615 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D APT61_16680 enterobactin synthase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D APT61_16625 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D APT61_16660 entF; non-ribosomal peptide synthetase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D APT61_16610 thioesterase K24147 entH; proofreading thioesterase EntH C 01055 Biosynthesis of vancomycin group antibiotics D APT61_19440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APT61_07760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:lax00946] D APT61_07365 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D APT61_19510 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:lax00332] D APT61_17920 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D APT61_17915 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:lax00261] D APT61_04700 cysN; sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D APT61_04695 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D APT61_21010 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D APT61_19065 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D APT61_00605 metL; bifunctional aspartokinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D APT61_01620 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D APT61_17810 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APT61_11520 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APT61_10245 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APT61_06190 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D APT61_18940 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:lax00521] D APT61_06475 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D APT61_16215 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D APT61_05910 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D APT61_14640 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D APT61_19450 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APT61_07770 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APT61_19440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APT61_07760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APT61_19455 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D APT61_19445 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D APT61_07765 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D APT61_06475 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:lax00525] D APT61_19450 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APT61_07770 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D APT61_19440 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D APT61_07760 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:lax00401] D APT61_05635 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APT61_07850 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APT61_20890 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis [PATH:lax00405] D APT61_10450 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D APT61_09505 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D APT61_13990 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APT61_09025 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_13985 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_01340 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_06100 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_16580 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_09635 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D APT61_13980 acyl carrier protein K02078 acpP; acyl carrier protein D APT61_01395 acyl carrier protein K02078 acpP; acyl carrier protein D APT61_01400 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:lax00999] D APT61_04025 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D APT61_02245 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D APT61_07365 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:lax00362] D APT61_09070 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D APT61_09060 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D APT61_09065 muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D APT61_09055 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D APT61_09045 3-oxoadipate CoA-transferase K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D APT61_09050 3-oxoadipate CoA-transferase K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D APT61_01120 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_06605 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_10870 Tautomerase PptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D APT61_14475 carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_10060 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:lax00627] D APT61_08995 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D APT61_12770 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D APT61_14715 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D APT61_06720 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APT61_17835 phenolic acid decarboxylase subunit B K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:lax00364] D APT61_09070 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D APT61_01055 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APT61_03780 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APT61_09060 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:lax00625] D APT61_11170 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APT61_10405 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D APT61_10500 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APT61_09390 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D APT61_19590 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:lax00361] D APT61_09070 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D APT61_01055 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APT61_03780 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APT61_09060 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00623 Toluene degradation [PATH:lax00623] D APT61_09070 catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D APT61_09060 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D APT61_01055 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D APT61_03780 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation D APT61_10870 Tautomerase PptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:lax00633] D APT61_15340 NADPH-dependent oxidoreductase K10678 nfsA; nitroreductase [EC:1.-.-.-] D APT61_16860 NAD(P)H-dependent oxidoreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D APT61_12670 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D APT61_01120 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D APT61_06605 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:lax00643] D APT61_10010 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D APT61_08995 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D APT61_12770 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation [PATH:lax00791] D APT61_11765 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D APT61_11770 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D APT61_03485 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D APT61_03490 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D APT61_03495 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:lax00930] D APT61_10050 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D APT61_01125 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D APT61_06610 fadJ; multifunctional fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D APT61_10870 Tautomerase PptA K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:lax00626] D APT61_11170 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D APT61_10405 alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D APT61_10500 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D APT61_09390 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:lax03020] D APT61_21195 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APT61_21190 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APT61_02180 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APT61_21740 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:lax03010] D APT61_14960 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D APT61_18260 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D APT61_02090 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D APT61_02175 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D APT61_02145 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D APT61_20225 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D APT61_02025 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D APT61_02130 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D APT61_02510 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D APT61_02055 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D APT61_02170 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D APT61_02020 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D APT61_02165 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D APT61_02125 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D APT61_02830 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D APT61_05585 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D APT61_02105 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D APT61_20215 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D APT61_02080 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D APT61_18980 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D APT61_03450 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D APT61_21210 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D APT61_02075 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D APT61_02060 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D APT61_02065 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D APT61_02120 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D APT61_02135 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D APT61_21200 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D APT61_20210 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D APT61_21205 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D APT61_21215 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D APT61_02505 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D APT61_02110 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D APT61_02155 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D APT61_02095 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D APT61_02185 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D APT61_02140 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D APT61_05600 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D APT61_13025 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D APT61_02720 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D APT61_02085 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D APT61_02070 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D APT61_02115 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D APT61_07100 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D APT61_02725 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D APT61_21680 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D APT61_02100 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D APT61_02150 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D APT61_00585 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D APT61_14005 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D APT61_21675 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D APT61_13030 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D APT61_21100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_18100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_03875 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_02265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_00730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_00100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_01155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_05680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_01170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_03880 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_02275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_05690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_21090 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_00110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_00745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_18085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_02280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_01175 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_00115 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_02290 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_21085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_00750 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_03885 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_05695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_18080 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:lax00970] D APT61_01165 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_06430 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_00740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_06435 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_18090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_00905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_04880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_04895 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_06580 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_16945 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_04885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_04890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_07905 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APT61_07955 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APT61_07915 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APT61_07940 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APT61_00755 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APT61_18020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APT61_18075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APT61_08225 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D APT61_16315 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APT61_16300 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APT61_16305 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APT61_16320 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APT61_00105 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APT61_02270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APT61_05685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APT61_21095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APT61_08220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_04230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_21240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_20375 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_20385 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_20380 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_00910 tRNA-His K14226 tRNA-His; tRNA His D APT61_00735 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APT61_01160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APT61_18095 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APT61_19840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_16295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_02790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_19210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_19215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_19220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_00915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_08230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_16015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_06395 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_16000 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_15985 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_15990 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_03430 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_16290 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_04485 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_04490 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_04495 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_16310 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_02800 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_03900 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APT61_20540 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APT61_21295 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APT61_07080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APT61_00920 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APT61_07965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_04875 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_14275 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_14315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_14620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_14695 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_02285 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APT61_17905 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APT61_21235 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APT61_21250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APT61_00760 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D APT61_21245 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APT61_09340 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APT61_09350 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APT61_12740 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_12735 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_06410 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_06405 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_16005 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_06400 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_21785 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D APT61_06415 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APT61_16255 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APT61_04865 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APT61_18945 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APT61_08550 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APT61_14865 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APT61_21385 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APT61_21380 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APT61_13040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APT61_15030 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APT61_19975 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D APT61_21490 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D APT61_16975 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APT61_07410 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APT61_02215 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D APT61_02580 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APT61_16385 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APT61_18970 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APT61_04215 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APT61_08510 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APT61_18135 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APT61_06020 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APT61_13020 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APT61_13015 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APT61_12595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APT61_01835 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:lax03060] D APT61_02160 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D APT61_21225 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D APT61_02785 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D APT61_17465 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D APT61_17460 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D APT61_17470 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D APT61_22095 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APT61_18570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APT61_21560 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APT61_18575 SecA regulator SecM K13301 secM; secretion monitor D APT61_05580 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APT61_17225 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D APT61_01485 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D APT61_01085 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D APT61_01090 preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D APT61_01095 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D APT61_16455 tatE; preprotein translocase subunit SecE K03425 tatE; sec-independent protein translocase protein TatE D APT61_05790 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D APT61_18965 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:lax04122] D APT61_05925 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APT61_05975 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D APT61_01440 tRNA 2-thiouridine(34) synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D APT61_02015 tRNA 2-thiouridine(34) synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D APT61_02010 tRNA 2-thiouridine(34) synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D APT61_02005 tRNA 2-thiouridine(34) synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D APT61_14710 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D APT61_13795 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D APT61_15800 moaE; molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D APT61_15820 moaA; cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D APT61_15805 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D APT61_13210 thiosulfate sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11] D APT61_15565 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D APT61_15810 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D APT61_19030 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D APT61_15815 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D APT61_17390 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APT61_21165 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D APT61_21160 molybdopterin biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:lax03018] D APT61_04415 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D APT61_14025 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D APT61_00835 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D APT61_04635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APT61_02835 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APT61_15745 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D APT61_20310 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APT61_02845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APT61_01015 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APT61_00845 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APT61_00480 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APT61_19000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APT61_20485 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APT61_20340 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D APT61_06130 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D APT61_11110 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D APT61_18380 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:lax03030] D APT61_08665 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APT61_18025 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APT61_18185 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APT61_17130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APT61_13955 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APT61_16395 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APT61_19200 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APT61_02585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APT61_22080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APT61_20900 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D APT61_03445 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D APT61_20865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_13370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_18030 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D APT61_18190 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D APT61_00150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APT61_21730 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_06365 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:lax03410] D APT61_12575 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D APT61_05740 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D APT61_03930 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D APT61_21670 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D APT61_16135 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D APT61_07625 3-methyladenine DNA glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D APT61_21315 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D APT61_03435 formamidopyrimidine-DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D APT61_13185 exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D APT61_07210 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D APT61_00150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APT61_04205 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APT61_21730 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_06365 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:lax03420] D APT61_13880 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D APT61_20870 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D APT61_15830 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D APT61_08210 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D APT61_00990 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APT61_00150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APT61_21730 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_06365 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:lax03430] D APT61_04760 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D APT61_20350 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D APT61_04410 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D APT61_00990 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APT61_07880 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D APT61_06070 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D APT61_17395 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D APT61_08655 DNA polymerase III subunit epsilon K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D APT61_04205 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APT61_20865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_13370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_18185 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APT61_22080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APT61_17130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APT61_16395 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APT61_13955 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APT61_18025 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APT61_08665 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APT61_02585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APT61_19200 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APT61_21730 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_06365 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_01820 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APT61_03265 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:lax03440] D APT61_04205 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APT61_20865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_13370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_22075 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D APT61_05805 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D APT61_17120 recR; recombination protein RecR K06187 recR; recombination protein RecR D APT61_04855 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D APT61_00150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APT61_08570 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D APT61_08575 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D APT61_08565 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D APT61_21755 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D APT61_04465 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D APT61_04455 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D APT61_04470 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D APT61_18185 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APT61_22080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APT61_17130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APT61_16395 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APT61_13955 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APT61_18025 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APT61_08665 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APT61_02585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APT61_19200 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APT61_00580 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D APT61_20220 primosomal replication protein N K02686 priB; primosomal replication protein N D APT61_17145 primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D APT61_19275 primosomal protein DnaI K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:lax03250] D APT61_01870 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda [PATH:lax03258] D APT61_13620 phage tail protein K26967 Z; Enterobacteria phage tail completion protein D APT61_13610 phage tail protein K26969 V; Enterobacteria phage tail tube protein D APT61_13595 phage tail tape measure protein K26972 H; Enterobacteria phage tape measure protein # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:lax02010] D APT61_06305 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APT61_00485 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APT61_06310 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D APT61_06315 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D APT61_06320 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APT61_09250 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D APT61_09255 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D APT61_09260 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D APT61_17665 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D APT61_17655 taurine transporter subunit K15552 tauC; taurine transport system permease protein D APT61_17660 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APT61_14835 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D APT61_14845 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D APT61_14850 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APT61_15920 modA; molybdate transporter K02020 modA; molybdate transport system substrate-binding protein D APT61_15915 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D APT61_15910 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D APT61_15930 molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D APT61_17685 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D APT61_14635 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D APT61_10965 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D APT61_17690 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D APT61_14625 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D APT61_10970 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D APT61_17695 fbpC; ferric transporter ATP-binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D APT61_14630 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D APT61_10960 ABC transporter substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D APT61_18810 tbpA; thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D APT61_18815 thiP; thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein D APT61_18820 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D APT61_13845 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D APT61_13840 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D APT61_13835 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D APT61_13830 potA; Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D APT61_15325 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D APT61_15310 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D APT61_15315 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D APT61_15320 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D APT61_04940 proX; glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D APT61_04945 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D APT61_04950 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D APT61_07370 osmoprotectant uptake system substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D APT61_12000 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D APT61_07375 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D APT61_07385 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D APT61_11995 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D APT61_12005 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D APT61_07380 ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D APT61_12010 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D APT61_20985 malE; maltose ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APT61_20990 malF; maltose transporter K10109 malF; maltose/maltodextrin transport system permease protein D APT61_20995 malG; maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein D APT61_20980 maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APT61_09735 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APT61_04320 sugar ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein D APT61_20805 sugar ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein D APT61_04335 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein D APT61_04330 sugar ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein D APT61_04325 sugar ABC transporter ATP-binding protein K10195 togA; oligogalacturonide transport system ATP-binding protein D APT61_02690 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D APT61_02685 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D APT61_02680 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D APT61_02695 phospholipid ABC transporter substrate-binding protein K07122 mlaB; phospholipid transport system transporter-binding protein D APT61_02675 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D APT61_00070 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D APT61_20735 transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D APT61_00065 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D APT61_20730 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D APT61_00060 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APT61_20725 D-ribose transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APT61_00055 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D APT61_08365 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D APT61_08375 araH; L-arabinose transporter permease K10538 araH; L-arabinose transport system permease protein D APT61_08370 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D APT61_20065 sugar ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D APT61_20050 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D APT61_20055 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D APT61_20060 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D APT61_07260 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D APT61_07270 mglC; beta-methylgalactoside transporter permease K10541 mglC; methyl-galactoside transport system permease protein D APT61_07265 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D APT61_21410 xylF; D-xylose transporter subunit XylF K10543 xylF; D-xylose transport system substrate-binding protein D APT61_21420 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D APT61_21415 D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D APT61_00420 ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D APT61_00410 branched-chain amino acid ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D APT61_00405 branched-chain amino acid ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D APT61_00415 D-ribose transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D APT61_16685 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D APT61_16700 sugar ABC transporter permease K17203 eryF; erythritol transport system permease protein D APT61_16695 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D APT61_01550 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D APT61_01555 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D APT61_01560 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D APT61_01565 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D APT61_22175 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D APT61_22170 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D APT61_22165 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D APT61_22160 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D APT61_20650 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D APT61_20655 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D APT61_20645 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D APT61_04270 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APT61_06725 histidine ABC transporter substrate-binding protein HisJ K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APT61_10545 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APT61_06740 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D APT61_06735 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D APT61_06745 amino acid transporter K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D APT61_06730 histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein D APT61_15660 glnH; glutamine ABC transporter substrate-bindnig protein K10036 glnH; glutamine transport system substrate-binding protein D APT61_15665 glnP; glutamine ABC transporter permease K10037 glnP; glutamine transport system permease protein D APT61_15670 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D APT61_15285 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D APT61_15270 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D APT61_15280 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D APT61_15275 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D APT61_15265 arginine ABC transporter ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D APT61_16355 amino acid transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APT61_16365 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D APT61_16360 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D APT61_16370 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APT61_02310 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D APT61_02305 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D APT61_02300 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D APT61_02295 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D APT61_08175 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D APT61_08185 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D APT61_08190 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D APT61_01505 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_11035 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_08300 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_01525 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_11055 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D APT61_08295 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APT61_01530 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APT61_01535 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D APT61_11050 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D APT61_08290 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D APT61_11045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_08285 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_01540 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_01545 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_11040 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_08280 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_21855 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D APT61_18120 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein D APT61_12855 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D APT61_18115 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D APT61_12860 methionine import system permease MetP K02072 metI; D-methionine transport system permease protein D APT61_18110 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein D APT61_12865 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D APT61_11635 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D APT61_11630 urea ABC transporter permease K11960 urtB; urea transport system permease protein D APT61_11625 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D APT61_11620 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D APT61_11615 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D APT61_15835 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D APT61_09400 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_09780 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_14700 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_09405 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D APT61_09410 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D APT61_09415 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein D APT61_09420 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D APT61_21280 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_10600 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_10730 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_21275 peptide transporter K12369 dppB; dipeptide transport system permease protein D APT61_21270 peptide transporter K12370 dppC; dipeptide transport system permease protein D APT61_21265 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D APT61_21260 dppF; peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D APT61_09660 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D APT61_09655 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D APT61_09650 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D APT61_09645 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D APT61_09640 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D APT61_15545 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D APT61_15540 glutathione ABC transporter permease K13890 gsiC; glutathione transport system permease protein D APT61_15535 glutathione ABC transporter permease K13891 gsiD; glutathione transport system permease protein D APT61_15550 glutathione ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D APT61_07135 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D APT61_07130 microcin ABC transporter permease K13895 yejE; microcin C transport system permease protein D APT61_07125 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D APT61_16635 iron-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D APT61_16645 iron-enterobactin transporter K23186 fepD; iron-siderophore transport system permease protein D APT61_16650 iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein D APT61_16655 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D APT61_18335 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D APT61_18330 iron ABC transporter K23228 fhuB; ferric hydroxamate transport system permease protein D APT61_18340 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D APT61_18305 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D APT61_13005 Vitamin B12 import system permease BtuC K06073 btuC; vitamin B12 transport system permease protein D APT61_12995 vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D APT61_08590 znuA; zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D APT61_08580 znuB; high-affinity zinc transporter membrane component K09816 znuB; zinc transport system permease protein D APT61_08585 znuC; Mn2+/Zn2+ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D APT61_03130 autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein D APT61_03120 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D APT61_03125 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein D APT61_03115 ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D APT61_19395 sugar transporter K10107 kpsE; capsular polysaccharide transport system permease protein D APT61_19385 ABC transporter K09688 kpsM; capsular polysaccharide transport system permease protein D APT61_19390 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D APT61_13860 outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D APT61_13870 outer membrane-specific lipoprotein transporter subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D APT61_13865 lolD; lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D APT61_02595 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D APT61_02600 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D APT61_02645 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D APT61_01495 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D APT61_01490 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APT61_14945 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D APT61_17260 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D APT61_17255 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D APT61_05415 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D APT61_06555 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D APT61_15065 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D APT61_15060 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D APT61_15100 macrolide transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D APT61_07040 multidrug transporter membrane component/ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:lax02060] D APT61_06340 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D APT61_06345 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr D APT61_16960 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D APT61_06335 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APT61_13945 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APT61_16260 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APT61_04815 PTS N-acetyl-D-glucosamine transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APT61_05985 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_12210 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_05835 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D APT61_07315 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D APT61_03870 PTS sugar transporter K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D APT61_04800 PTS cellobiose transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D APT61_19940 PTS maltose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APT61_21510 PTS mannitol transporter subunit IIABC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APT61_16080 PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195] D APT61_13120 PTS N N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_21900 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_21185 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_13130 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_21885 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_21180 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_04365 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_13125 PTS N N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_21890 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_19235 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_08805 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APT61_08800 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D APT61_08795 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D APT61_15495 PTS sugar transporter K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-] D APT61_15490 PTS sugar transporter K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-] D APT61_15485 PTS sugar transporter K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component D APT61_15480 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component D APT61_20250 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APT61_14585 cmtB; PTS mannitol transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APT61_20255 PTS L-ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APT61_14590 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APT61_20260 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D APT61_14595 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component D APT61_07190 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D APT61_14615 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APT61_07200 PTS fructose transporter subunit EIIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APT61_14610 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D APT61_14605 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D APT61_07195 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D APT61_04420 phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D APT61_02620 phosphohistidinoprotein-hexose phosphotransferase K08485 ptsO; phosphocarrier protein NPr D APT61_02630 transcriptional regulator K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:lax03070] D APT61_03600 hypothetical protein K12340 tolC; outer membrane protein D APT61_15225 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D APT61_15230 type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D APT61_15215 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D APT61_15210 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D APT61_15205 type II secretion system protein GspH K02457 gspH; general secretion pathway protein H D APT61_15200 type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D APT61_15195 type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D APT61_15190 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D APT61_15185 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D APT61_15220 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APT61_15175 general secretion pathway protein GspO K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APT61_17465 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D APT61_17460 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D APT61_21225 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D APT61_02785 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D APT61_02160 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D APT61_17470 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D APT61_22095 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APT61_18570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APT61_18575 SecA regulator SecM K13301 secM; secretion monitor D APT61_01485 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D APT61_21560 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APT61_05580 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APT61_01085 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D APT61_01090 preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D APT61_01095 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D APT61_16455 tatE; preprotein translocase subunit SecE K03425 tatE; sec-independent protein translocase protein TatE D APT61_10875 type VI secretion protein Vgr K11904 vgrG; type VI secretion system secreted protein VgrG D APT61_04670 Hcp family T6SS protein CtsH1 K11903 hcp; type VI secretion system secreted protein Hcp D APT61_21960 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D APT61_09525 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D APT61_09825 Hcp family T6SS protein CtsH1 K11903 hcp; type VI secretion system secreted protein Hcp D APT61_10655 Hcp family T6SS protein CtsH1 K11903 hcp; type VI secretion system secreted protein Hcp D APT61_19520 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D APT61_11595 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D APT61_09895 type VI secretion protein K11906 vasD; type VI secretion system protein VasD D APT61_09875 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D APT61_09815 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK D APT61_09830 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:lax02020] D APT61_17510 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APT61_17515 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D APT61_17580 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APT61_22175 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D APT61_13815 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APT61_13810 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D APT61_00255 virulence protein K07804 pagC; putatice virulence related protein PagC D APT61_05210 virulence protein K07804 pagC; putatice virulence related protein PagC D APT61_01740 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APT61_01735 ompR; two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D APT61_07020 hypothetical protein K09475 ompC; outer membrane pore protein C D APT61_07980 hypothetical protein K09476 ompF; outer membrane pore protein F D APT61_14870 hypothetical protein K09476 ompF; outer membrane pore protein F D APT61_00460 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APT61_00465 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APT61_03045 EnvZ/OmpR regulon moderator K25864 mzrA; modulator protein MzrA D APT61_12175 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APT61_12155 two-component system response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D APT61_18290 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D APT61_07595 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APT61_07590 two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D APT61_07615 efflux transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D APT61_07610 multidrug transporter K07788 mdtB; multidrug efflux pump D APT61_07605 multidrug transporter K07789 mdtC; multidrug efflux pump D APT61_07600 transporter K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D APT61_06235 multidrug transporter K18324 acrD; multidrug efflux pump D APT61_02740 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APT61_02745 XRE family transcriptional regulator K07771 basR; two-component system, OmpR family, response regulator BasR D APT61_03670 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APT61_03675 two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D APT61_08395 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D APT61_08400 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D APT61_10695 flagellin K02406 fliC; flagellin D APT61_08150 flagellin K02406 fliC; flagellin D APT61_08165 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D APT61_08405 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D APT61_16205 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APT61_16210 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APT61_16190 potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D APT61_16195 potassium-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D APT61_16200 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D APT61_02605 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APT61_19075 two-component system response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D APT61_22085 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D APT61_16675 outer membrane receptor protein K19611 fepA; ferric enterobactin receptor D APT61_07975 histidine kinase K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APT61_07970 transcriptional regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR D APT61_08350 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D APT61_11195 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D APT61_09285 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APT61_09280 two-component system response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D APT61_06240 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APT61_09295 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APT61_11005 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APT61_09300 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APT61_11000 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APT61_09310 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APT61_10990 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APT61_09305 nitrate reductase K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D APT61_10995 nitrate reductase K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D APT61_11090 sulfate ABC transporter substrate-binding protein K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APT61_11095 formate dehydrogenase K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APT61_11100 formate dehydrogenase K08349 fdnH; formate dehydrogenase-N, beta subunit D APT61_11105 formate dehydrogenase K08350 fdnI; formate dehydrogenase-N, gamma subunit D APT61_20425 fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D APT61_20430 fumarate reductase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D APT61_20435 fumarate reductase K00246 frdC; succinate dehydrogenase subunit C D APT61_20440 fumarate reductase K00247 frdD; succinate dehydrogenase subunit D D APT61_17680 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D APT61_17675 MASE1 sensor histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D APT61_17670 two-component system response regulator K20264 fusR; two-component system, NarL family, response regulator FusR D APT61_18125 rcsF; colanic acid biosynthesis protein RcsF K06080 rcsF; RcsF protein D APT61_07005 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APT61_07015 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APT61_08040 rcsA; helix-turn-helix transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APT61_07010 two-component system response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APT61_03460 hypothetical protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APT61_08205 sirA; two-component system response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D APT61_08195 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APT61_04870 carbon storage regulator K03563 csrA; carbon storage regulator D APT61_08450 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D APT61_08435 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D APT61_08430 polyketide synthase K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D APT61_08440 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D APT61_08445 fimbrial assembly protein K07347 fimD; outer membrane usher protein D APT61_15725 fimbrial assembly protein K07347 fimD; outer membrane usher protein D APT61_18270 bifunctional uridylyltransferase/uridylyl-removing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D APT61_05870 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1 D APT61_00175 glnL; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APT61_00170 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D APT61_00180 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_01195 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D APT61_02640 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D APT61_05855 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APT61_05865 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D APT61_08465 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APT61_20290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_09235 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_03790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_11475 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_19295 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_20180 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_20045 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_08455 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APT61_03155 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APT61_10505 chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APT61_11240 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APT61_08460 methyl-accepting protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D APT61_03150 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D APT61_10815 chemotaxis protein K03776 aer; aerotaxis receptor D APT61_08420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D APT61_08415 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APT61_08475 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APT61_08470 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APT61_06895 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D APT61_14545 histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D APT61_14550 two-component system response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D APT61_14530 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A D APT61_14540 tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B D APT61_14535 tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C D APT61_16370 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APT61_16365 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D APT61_16360 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D APT61_16355 amino acid transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APT61_01895 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APT61_09615 enoyl-CoA hydratase K13816 rpfF; DSF synthase D APT61_11470 glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2] D APT61_05345 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APT61_10645 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APT61_16070 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D APT61_05340 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APT61_10640 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APT61_16065 cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D APT61_16060 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D APT61_03600 hypothetical protein K12340 tolC; outer membrane protein D APT61_07425 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D APT61_07655 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D APT61_07660 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D APT61_07430 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D APT61_07435 protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APT61_07665 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APT61_00860 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D APT61_00865 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D APT61_15895 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D APT61_14100 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D APT61_03910 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:lax02024] D APT61_04915 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D APT61_20340 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D APT61_09505 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D APT61_05630 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APT61_12945 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APT61_15960 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D APT61_10450 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D APT61_03670 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APT61_03675 two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D APT61_05855 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APT61_05865 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D APT61_08395 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D APT61_08400 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D APT61_16210 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APT61_17675 MASE1 sensor histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D APT61_17670 two-component system response regulator K20264 fusR; two-component system, NarL family, response regulator FusR D APT61_08195 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APT61_03130 autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein D APT61_03120 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D APT61_03125 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein D APT61_03115 ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D APT61_03105 autoinducer-2 kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189] D APT61_03110 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor D APT61_03135 autoinducer 2 aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] D APT61_03140 autoinducer-2 (AI-2) modifying protein LsrG K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D APT61_10670 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D APT61_10685 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D APT61_10680 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D APT61_10675 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D APT61_01505 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_11035 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_08300 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_01525 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_11055 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D APT61_08295 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APT61_01530 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APT61_01535 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D APT61_11050 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D APT61_08290 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D APT61_11045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_08285 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_01540 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_01545 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_11040 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_08280 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_08040 rcsA; helix-turn-helix transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APT61_09615 enoyl-CoA hydratase K13816 rpfF; DSF synthase D APT61_09620 RNase II stability modulator K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D APT61_05425 hypothetical protein K20276 bapA; large repetitive protein D APT61_13500 hypothetical protein K20276 bapA; large repetitive protein D APT61_08860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D APT61_01895 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APT61_20930 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D APT61_09570 ribA; GTP cyclohydrolase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D APT61_17430 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D APT61_05380 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APT61_05385 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APT61_10740 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APT61_10165 transporter K18139 oprM; outer membrane protein, multidrug efflux system D APT61_09400 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_09780 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_14700 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_09405 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D APT61_09410 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D APT61_09415 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein D APT61_09420 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D APT61_16765 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APT61_11155 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APT61_07515 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APT61_03820 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APT61_16770 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D APT61_11150 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D APT61_07520 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D APT61_03825 peptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D APT61_16775 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APT61_11145 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APT61_07525 D-ala-D-ala transporter subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APT61_03830 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APT61_11140 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APT61_07530 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APT61_16780 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APT61_03835 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APT61_07535 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D APT61_16785 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D APT61_03840 peptide ABC transporter substrate-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D APT61_22095 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APT61_21225 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D APT61_02785 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D APT61_02160 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D APT61_17470 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D APT61_18570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APT61_01485 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D APT61_21560 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APT61_05580 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:lax02030] D APT61_20290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_09235 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_03790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_11475 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_19295 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_20180 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_20045 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_08455 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APT61_03155 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APT61_10505 chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APT61_11240 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APT61_08460 methyl-accepting protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D APT61_03150 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D APT61_10815 chemotaxis protein K03776 aer; aerotaxis receptor D APT61_20985 malE; maltose ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APT61_00070 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D APT61_20735 transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D APT61_07260 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D APT61_21280 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_10600 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_10730 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_08415 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APT61_08420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D APT61_08475 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APT61_08480 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D APT61_08470 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APT61_06895 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D APT61_08465 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APT61_08100 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APT61_08070 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D APT61_08065 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D APT61_08405 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D APT61_08410 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:lax02040] D APT61_08110 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D APT61_08105 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D APT61_08100 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APT61_08095 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D APT61_08090 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APT61_08085 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D APT61_08080 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D APT61_08075 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D APT61_08070 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D APT61_08065 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D APT61_08060 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D APT61_08055 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D APT61_08050 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APT61_08045 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APT61_08495 flagellar protein flhE K03516 flhE; flagellar protein FlhE D APT61_08490 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APT61_08485 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D APT61_14095 flgA; flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D APT61_14090 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D APT61_14085 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D APT61_14080 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D APT61_14075 flgE; flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D APT61_14070 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D APT61_14065 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D APT61_14060 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D APT61_14055 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D APT61_14050 flgJ; flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D APT61_14045 flgK; flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D APT61_14040 flgL; flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D APT61_10695 flagellin K02406 fliC; flagellin D APT61_08150 flagellin K02406 fliC; flagellin D APT61_08145 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2 D APT61_08140 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D APT61_08135 flagellar biosynthesis protein FliT K02423 fliT; flagellar protein FliT D APT61_08405 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D APT61_08410 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D APT61_14100 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D APT61_14105 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D APT61_08175 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D APT61_08170 flagellar regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D APT61_03440 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D APT61_08395 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D APT61_08400 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D APT61_02640 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D APT61_08165 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D APT61_04635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D APT61_21050 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:lax01501] D APT61_07980 hypothetical protein K09476 ompF; outer membrane pore protein F D APT61_14870 hypothetical protein K09476 ompF; outer membrane pore protein F D APT61_07020 hypothetical protein K09475 ompC; outer membrane pore protein C D APT61_17340 ampG; AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D APT61_13915 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D APT61_09400 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_09780 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_14700 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_09405 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D APT61_09410 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D APT61_09415 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein D APT61_09420 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D APT61_17160 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D APT61_17165 multidrug transporter K18138 acrB; multidrug efflux pump D APT61_16810 multidrug RND transporter K18138 acrB; multidrug efflux pump D APT61_10165 transporter K18139 oprM; outer membrane protein, multidrug efflux system D APT61_03600 hypothetical protein K12340 tolC; outer membrane protein D APT61_01775 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APT61_16415 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APT61_08775 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APT61_18640 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:lax01502] D APT61_17600 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APT61_18600 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APT61_08925 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APT61_20895 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APT61_18630 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D APT61_18625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APT61_18610 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lax01503] D APT61_13815 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APT61_13810 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D APT61_21300 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APT61_16475 pagP; phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APT61_02740 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APT61_02745 XRE family transcriptional regulator K07771 basR; two-component system, OmpR family, response regulator BasR D APT61_12660 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APT61_09660 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D APT61_09655 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D APT61_09650 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D APT61_09645 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D APT61_09640 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D APT61_18140 lipoporotein NlpE K06079 cutF; copper homeostasis protein (lipoprotein) D APT61_00460 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APT61_00465 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APT61_04480 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_06280 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_20355 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_13885 peptigoglycan-binding protein LysM K19236 ycfS; L,D-transpeptidase YcfS D APT61_18290 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D APT61_00140 protein disulfide isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D APT61_01870 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APT61_11575 transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APT61_17160 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D APT61_17165 multidrug transporter K18138 acrB; multidrug efflux pump D APT61_16810 multidrug RND transporter K18138 acrB; multidrug efflux pump D APT61_03600 hypothetical protein K12340 tolC; outer membrane protein D APT61_18200 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:lax01000] C 01001 Protein kinases [BR:lax01001] D APT61_05470 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D APT61_11315 serine/threonine protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APT61_10145 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D APT61_07435 protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APT61_07665 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APT61_20595 capsular biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D APT61_17510 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APT61_13815 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APT61_01740 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APT61_12175 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APT61_00460 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APT61_07595 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APT61_02740 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APT61_03670 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APT61_16205 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APT61_02605 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APT61_09285 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APT61_06240 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APT61_17675 MASE1 sensor histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D APT61_07015 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APT61_07005 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APT61_07975 histidine kinase K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APT61_06485 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APT61_07395 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APT61_00175 glnL; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APT61_05855 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APT61_08415 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APT61_14545 histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:lax01009] D APT61_00480 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APT61_17115 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D APT61_19125 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:lax01002] D APT61_18965 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D APT61_15175 general secretion pathway protein GspO K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APT61_02050 peptidase A24 K02506 hofD; leader peptidase HopD [EC:3.4.23.43] D APT61_05025 hycI; hydrogenase 3 maturation endopeptidase HyCI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D APT61_16140 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D APT61_06080 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D APT61_07150 spr; lipoprotein Spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D APT61_12690 endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D APT61_12990 endopeptidase K13695 nlpC; probable lipoprotein NlpC D APT61_06715 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D APT61_02545 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D APT61_22180 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D APT61_16285 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D APT61_09915 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D APT61_02890 general stress protein K05520 yhbO; deglycase [EC:3.5.1.124] D APT61_17385 oxidative-stress-resistance chaperone K03152 thiJ; protein deglycase [EC:3.5.1.124] D APT61_07935 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK D APT61_12880 murein L,D-transpeptidase K19234 ynhG; L,D-transpeptidase YnhG D APT61_15600 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D APT61_13885 peptigoglycan-binding protein LysM K19236 ycfS; L,D-transpeptidase YcfS D APT61_14890 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D APT61_14855 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D APT61_01280 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D APT61_11680 dipeptidyl carboxypeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D APT61_04460 protease K01407 ptrA; protease III [EC:3.4.24.55] D APT61_02590 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D APT61_05960 aminopeptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D APT61_16605 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11] D APT61_06225 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D APT61_13825 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D APT61_10595 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D APT61_17945 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D APT61_04275 amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D APT61_12090 peptidase M20 K12940 abgA; aminobenzoyl-glutamate utilization protein A D APT61_12095 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D APT61_08595 peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D APT61_18265 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D APT61_07300 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D APT61_01130 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D APT61_04115 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D APT61_07920 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D APT61_04685 Zn-dependent exopeptidase M28 K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D APT61_12040 peptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D APT61_02770 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D APT61_08735 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D APT61_04040 metalloprotease K07387 K07387; metalloprotease [EC:3.4.24.-] D APT61_06170 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D APT61_18225 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D APT61_06635 mepA; murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D APT61_07960 DgsA anti-repressor MtfA K09933 mtfA; MtfA peptidase D APT61_12050 serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-] D APT61_18290 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D APT61_02490 serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D APT61_02485 outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D APT61_08650 protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D APT61_07885 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_15445 peptidase M15 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_16430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_07350 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D APT61_17625 beta-lactam-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D APT61_02750 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D APT61_17320 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D APT61_17310 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D APT61_14780 Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D APT61_20945 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D APT61_10250 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D APT61_05790 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D APT61_08730 carboxy-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D APT61_19510 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D APT61_13255 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D APT61_09545 protease K04774 sohB; serine protease SohB [EC:3.4.21.-] D APT61_01660 rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D APT61_08935 ldcA; LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D APT61_00565 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D APT61_15555 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D APT61_01580 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D APT61_07550 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D APT61_10630 protease K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D APT61_02860 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D APT61_02865 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D APT61_20020 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein D APT61_02435 tldD; metalloprotease TldD K03568 tldD; TldD protein D APT61_07060 ecotin K08276 eco; ecotin D APT61_05990 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D APT61_20325 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D APT61_20330 cell division protein FtsH K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:lax01003] D APT61_01640 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D APT61_07790 glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D APT61_03190 hypothetical protein K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D APT61_02615 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D APT61_05995 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APT61_18350 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APT61_01775 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APT61_07690 colanic acid biosynthesis glycosyltransferase WcaE K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D APT61_07680 colanic acid biosynthesis glycosyltransferase WcaC K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D APT61_00895 UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D APT61_00885 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D APT61_00850 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D APT61_14195 glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D APT61_13315 cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D APT61_11895 poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D APT61_04640 zeaxanthin glucosyltransferase K14596 crtX; zeaxanthin glucosyltransferase [EC:2.4.1.276] D APT61_08385 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D APT61_07745 colanic acid biosynthesis glycosyltransferase WcaL K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:lax01005] D APT61_18200 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D APT61_18195 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D APT61_18580 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D APT61_18210 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D APT61_16985 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D APT61_14940 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D APT61_14175 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D APT61_08600 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D APT61_06500 lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D APT61_07155 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D APT61_21655 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D APT61_16475 pagP; phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D APT61_12660 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D APT61_21300 phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D APT61_09210 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D APT61_14925 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D APT61_02660 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D APT61_02665 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D APT61_21615 ADP-heptose--LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D APT61_21660 lipopolysaccharide biosynthesis protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D APT61_21610 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D APT61_21625 glycosyl transferase family 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D APT61_21640 glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D APT61_21620 heptosyltransferase K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D APT61_18005 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D APT61_18105 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D APT61_03545 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D APT61_21605 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D APT61_00890 enterobacterial common antigen polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D APT61_07820 chain length determination protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D APT61_00850 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lax01011] D APT61_02705 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D APT61_01180 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D APT61_18605 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D APT61_18620 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D APT61_18635 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D APT61_17600 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APT61_18600 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D APT61_08925 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APT61_20895 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D APT61_00720 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D APT61_08935 ldcA; LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D APT61_18625 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D APT61_18610 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D APT61_03520 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D APT61_15435 UDP pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D APT61_14110 murein biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D APT61_01775 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D APT61_18350 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D APT61_05995 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D APT61_16415 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D APT61_08775 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APT61_18640 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APT61_07885 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_15445 peptidase M15 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_16430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D APT61_02750 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D APT61_17625 beta-lactam-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D APT61_07350 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D APT61_02615 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D APT61_07935 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK D APT61_12880 murein L,D-transpeptidase K19234 ynhG; L,D-transpeptidase YnhG D APT61_15600 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D APT61_13885 peptigoglycan-binding protein LysM K19236 ycfS; L,D-transpeptidase YcfS D APT61_14890 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D APT61_06635 mepA; murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D APT61_12690 endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D APT61_07150 spr; lipoprotein Spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D APT61_08595 peptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D APT61_19105 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D APT61_04500 mltA; murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D APT61_04845 murein hydrolase effector LrgB K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D APT61_03920 mltC; murein transglycosylase K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D APT61_18045 mltD; lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D APT61_08940 lytic murein transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D APT61_05845 lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D APT61_13965 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D APT61_16425 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D APT61_04480 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_06280 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_20355 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_15250 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_18520 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_12875 murein lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:lax01004] D APT61_13990 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D APT61_13995 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D APT61_01350 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APT61_06660 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D APT61_13975 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APT61_01335 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D APT61_09025 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_13985 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_01340 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_06100 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_16580 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D APT61_14785 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D APT61_18205 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D APT61_09635 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D APT61_17030 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D APT61_17240 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D APT61_09450 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D APT61_17290 thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D APT61_20780 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D APT61_08860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D APT61_20955 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D APT61_14000 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D APT61_03510 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D APT61_03690 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:lax01008] D APT61_16620 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D APT61_16680 enterobactin synthase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D APT61_16625 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D APT61_16660 entF; non-ribosomal peptide synthetase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D APT61_16610 thioesterase K24147 entH; proofreading thioesterase EntH C 01006 Prenyltransferases [BR:lax01006] D APT61_17400 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D APT61_15390 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D APT61_02715 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D APT61_18235 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D APT61_15370 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D APT61_20345 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D APT61_00555 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D APT61_20960 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D APT61_17365 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:lax01007] D APT61_06415 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APT61_16255 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APT61_18375 tRNA glutamyl-Q synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D APT61_12595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APT61_01835 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D APT61_16975 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APT61_08510 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APT61_07410 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APT61_18970 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APT61_02580 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APT61_16385 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APT61_04215 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APT61_08550 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APT61_14865 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APT61_06020 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APT61_21385 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APT61_21380 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APT61_15030 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APT61_18135 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APT61_13040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APT61_04865 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APT61_18945 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APT61_13020 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APT61_13015 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APT61_14875 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D APT61_21440 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D APT61_06820 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D APT61_06490 glutamate-pyruvate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D APT61_20890 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D APT61_16525 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D APT61_10540 aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D APT61_07850 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D APT61_21600 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D APT61_15850 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D APT61_12215 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D APT61_01885 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D APT61_13180 acetylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D APT61_19770 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D APT61_07445 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D APT61_03145 putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D APT61_15860 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D APT61_18325 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D APT61_00790 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D APT61_14975 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D APT61_00875 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:lax00194] D APT61_22195 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D APT61_22200 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D APT61_22205 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D APT61_22210 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D APT61_22215 ATP F0F1 synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D APT61_22220 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D APT61_22225 ATP F0F1 synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D APT61_00005 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APT61_00010 ATP F0F1 synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:lax03000] D APT61_07995 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APT61_18830 transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D APT61_19340 4-hydroxyphenylacetate catabolism regulator HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D APT61_00445 transcriptional regulator K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D APT61_00440 AraC family transcriptional regulator K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D APT61_13115 transcriptional regulator K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon D APT61_20845 transcriptional regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D APT61_11575 transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APT61_19085 transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D APT61_16840 transcriptional regulator K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator D APT61_10005 transcriptional regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB D APT61_13455 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT D APT61_10615 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D APT61_07030 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D APT61_09125 ftrA; transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D APT61_04525 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APT61_11850 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APT61_10385 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APT61_10535 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APT61_05175 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APT61_11060 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D APT61_00805 transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D APT61_01045 transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D APT61_18985 nhaR; transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D APT61_00690 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D APT61_04080 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D APT61_18675 leuO; transcriptional regulator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D APT61_02965 transcriptional regulator K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator D APT61_09560 cysB; LysR family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D APT61_07950 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D APT61_01960 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D APT61_12085 transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon D APT61_10935 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D APT61_07945 nitrogen assimilation transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D APT61_02440 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D APT61_00765 transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D APT61_21945 DeoR family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D APT61_15440 DeoR family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D APT61_01665 transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D APT61_03795 transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D APT61_20270 transcriptional repressor UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor D APT61_00230 DeoR family transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor D APT61_17200 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D APT61_00080 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APT61_04385 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APT61_00380 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APT61_14690 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APT61_07255 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APT61_21425 XylR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D APT61_21335 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D APT61_00575 transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D APT61_18660 transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D APT61_07485 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D APT61_19935 treR; trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D APT61_04805 transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor D APT61_12705 transcriptional regulator K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D APT61_01600 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D APT61_16965 LacI family transcriptional regulator K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D APT61_12205 transcriptional regulator K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D APT61_20660 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D APT61_15880 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D APT61_16085 transcriptional regulator K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D APT61_03860 GntR family transcriptional regulator K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor D APT61_08910 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D APT61_18495 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D APT61_04375 transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D APT61_22065 GntR family transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D APT61_03055 transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D APT61_21535 transcriptional regulator K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D APT61_05440 transcriptional regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor D APT61_19605 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D APT61_11825 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D APT61_11365 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D APT61_10760 GntR family transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator D APT61_19775 transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D APT61_11690 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor D APT61_17155 transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D APT61_21700 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator D APT61_14380 pyrimidine utilization regulatory protein R K09017 rutR; TetR/AcrR family transcriptional regulator D APT61_21865 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D APT61_12665 transcriptional repressor NemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D APT61_18765 hypothetical protein K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D APT61_02330 transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D APT61_13895 TetR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D APT61_00700 transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D APT61_15750 transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D APT61_15410 DNA-binding transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D APT61_00030 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D APT61_09320 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APT61_15050 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APT61_10440 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APT61_17265 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D APT61_08195 LuxR family transcriptional regulator K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D APT61_08040 rcsA; helix-turn-helix transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D APT61_14235 helix-turn-helix transcriptional regulator K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D APT61_19245 helix-turn-helix transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides D APT61_01670 helix-turn-helix transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D APT61_11570 transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR D APT61_12625 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D APT61_19555 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D APT61_04930 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D APT61_17830 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D APT61_18775 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D APT61_08990 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D APT61_17065 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D APT61_02195 zntR; heavy metal-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D APT61_20840 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D APT61_07390 helix-turn-helix-type transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D APT61_07585 helix-turn-helix-type transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes D APT61_16240 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D APT61_20930 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D APT61_21055 transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D APT61_08745 transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D APT61_19870 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D APT61_01895 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D APT61_12110 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D APT61_13760 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D APT61_05920 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D APT61_20315 transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D APT61_20130 arsenite transporter K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D APT61_10625 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D APT61_15630 manganese transport regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D APT61_08610 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D APT61_01185 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D APT61_02340 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APT61_19100 transcriptional regulator K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D APT61_02710 transcriptional regulator K07724 ner; Ner family transcriptional regulator D APT61_18805 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator D APT61_19115 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D APT61_11310 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APT61_13745 transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D APT61_12475 regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D APT61_15500 Fis family transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D APT61_04830 nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator D APT61_04955 transcriptional regulator K15836 fhlA; formate hydrogenlyase transcriptional activator D APT61_18285 transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D APT61_15925 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein D APT61_21370 transcriptional regulator K07726 K07726; putative transcriptional regulator D APT61_00595 transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D APT61_14370 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D APT61_07310 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D APT61_10495 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D APT61_17330 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D APT61_01105 rfaH; transcriptional regulator K05785 rfaH; transcriptional antiterminator RfaH D APT61_02475 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D APT61_16275 transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D APT61_12025 transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D APT61_21520 mtlR; mannitol repressor protein K02562 mtlR; mannitol operon repressor D APT61_09760 TyrR family transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D APT61_06185 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D APT61_10080 phenylacetic acid degradation protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D APT61_09665 pspF; psp operon transcriptional activator PspF K03974 pspF; psp operon transcriptional activator D APT61_09680 phage shock protein C K03973 pspC; phage shock protein C D APT61_03110 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor D APT61_16495 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D APT61_13410 hypothetical protein K07733 alpA; prophage regulatory protein D APT61_03995 hypothetical protein K07735 algH; putative transcriptional regulator D APT61_18370 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D APT61_17435 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D APT61_17930 sigma factor-binding protein Crl K11926 crl; sigma factor-binding protein Crl D APT61_21025 transcriptional regulator K14414 rtcR; transcriptional regulatory protein RtcR D APT61_18655 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:lax03021] D APT61_02180 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APT61_21195 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APT61_21190 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APT61_21740 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D APT61_03440 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D APT61_04750 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D APT61_05765 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D APT61_01500 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D APT61_02640 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D APT61_08165 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D APT61_18855 RNA polymerase-binding ATPase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D APT61_02810 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D APT61_17420 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D APT61_21220 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D APT61_02515 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D APT61_02520 stringent starvation protein B K03600 sspB; stringent starvation protein B D APT61_10135 response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D APT61_10140 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D APT61_10145 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D APT61_05770 anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA D APT61_05775 rseB; anti-sigma E factor K03598 rseB; sigma-E factor negative regulatory protein RseB D APT61_05780 SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D APT61_18370 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D APT61_02755 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D APT61_01730 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D APT61_00845 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APT61_18160 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:lax03019] D APT61_14025 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D APT61_02425 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D APT61_05795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APT61_20310 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APT61_20390 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D APT61_00835 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D APT61_15745 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D APT61_02845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APT61_01015 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APT61_04635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APT61_02835 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APT61_00845 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D APT61_00480 ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D APT61_19000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APT61_20485 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APT61_20340 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D APT61_06130 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D APT61_11110 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D APT61_18380 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D APT61_04415 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D APT61_04870 carbon storage regulator K03563 csrA; carbon storage regulator D APT61_02400 transcriptional regulator K18765 csrD; RNase E specificity factor CsrD D APT61_00550 ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D APT61_19855 RNase E inhibitor protein K09893 rraB; regulator of ribonuclease activity B D APT61_02625 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ D APT61_10155 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D APT61_18355 ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D APT61_12930 rprA; antisense sRNA RprA K18518 rprA; small regulatory RNA RprA C 03041 Spliceosome C 03011 Ribosome [BR:lax03011] D APT61_14960 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D APT61_18260 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D APT61_02090 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D APT61_02175 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D APT61_02145 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D APT61_20225 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D APT61_02025 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D APT61_02130 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D APT61_02510 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D APT61_02055 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D APT61_02170 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D APT61_02020 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D APT61_02165 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D APT61_02125 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D APT61_02830 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D APT61_05585 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D APT61_02105 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D APT61_20215 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D APT61_02080 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D APT61_18980 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D APT61_03450 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D APT61_21210 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D APT61_02075 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D APT61_02060 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D APT61_02065 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D APT61_02120 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D APT61_02135 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D APT61_20210 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D APT61_21205 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D APT61_21215 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D APT61_21200 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D APT61_02505 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D APT61_02110 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D APT61_02155 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D APT61_02095 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D APT61_02185 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D APT61_02140 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D APT61_05600 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D APT61_13025 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D APT61_02720 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D APT61_02085 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D APT61_02070 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D APT61_02115 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D APT61_02725 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D APT61_21680 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D APT61_02100 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D APT61_02150 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D APT61_00585 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D APT61_14005 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D APT61_21675 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D APT61_13030 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D APT61_07100 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D APT61_02280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_01175 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_00115 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_02290 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_21085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_00750 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_03885 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_05695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_18080 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_21100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_18100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_03875 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_02265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_00730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_00100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_01155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_05680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_01170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_03880 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_02275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_05690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_21090 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_00110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_00745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_18085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:lax03009] D APT61_05795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APT61_05470 kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D APT61_20390 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D APT61_05800 GTPase Era K03595 era; GTPase D APT61_02735 obgE; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D APT61_18370 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor D APT61_02810 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D APT61_17420 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D APT61_21220 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D APT61_07110 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D APT61_18885 ksgA; 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D APT61_02210 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D APT61_19205 rsmC; 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D APT61_01480 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D APT61_04005 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D APT61_08705 yebU; 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D APT61_00015 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D APT61_18650 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D APT61_02920 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D APT61_01285 methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D APT61_08780 rrmA; 23S rRNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D APT61_20305 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D APT61_02765 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D APT61_15680 23S rRNA methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D APT61_03095 23S rRNA (guanine(1835)-N(2))-methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D APT61_16410 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D APT61_14720 23S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D APT61_01275 rRNA methyltransferase K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D APT61_14810 rlmL; 23S rRNA methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D APT61_04535 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D APT61_06005 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D APT61_04615 rumA; 23S rRNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D APT61_15300 rumB; 23S rRNA (uracil(747)-C(5))-methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D APT61_05375 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D APT61_18860 bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D APT61_09530 23S rRNA pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D APT61_14020 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D APT61_05660 rluD; 23S rRNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D APT61_13785 23S rRNA pseudouridylate synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D APT61_21040 23S rRNA pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D APT61_05735 methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D APT61_19195 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D APT61_14125 ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D APT61_15335 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D APT61_10555 ribosomal-protein-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D APT61_05590 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D APT61_15465 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D APT61_14985 ribosomal protein S12 methylthiotransferase accessory factor YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D APT61_02355 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D APT61_06625 ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D APT61_13820 50S ribosomal protein L16 arginine hydroxylase K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D APT61_19640 50S ribosomal protein L16 arginine hydroxylase K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D APT61_14025 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D APT61_02425 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D APT61_03990 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D APT61_09935 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D APT61_02845 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D APT61_05750 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D APT61_20395 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D APT61_06035 ribosome biogenesis GTPase Der K03977 engA; GTPase D APT61_20335 GTPase HflX K03665 hflX; GTPase D APT61_02240 L-threonylcarbamoyladenylate synthase TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D APT61_21745 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D APT61_02820 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D APT61_02805 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D APT61_16955 ribosome-associated protein K14761 rlbA; ribosome-associated protein D APT61_16405 ribosome silencing factor K09710 ybeB; ribosome-associated protein D APT61_16340 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D APT61_02760 RNA-binding protein K07574 yhbY; RNA-binding protein D APT61_21525 hypothetical protein K14762 yibL; ribosome-associated protein D APT61_20025 hypothetical protein K09889 yjgA; ribosome-associated protein D APT61_02635 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D APT61_05650 translation inhibitor protein RaiA K05809 raiA; ribosome-associated inhibitor A D APT61_11200 30S ribosomal protein S22 K02972 sra; stationary-phase-induced ribosome-associated protein D APT61_09145 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase D APT61_14010 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:lax03016] D APT61_06900 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D APT61_03525 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D APT61_21020 RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D APT61_06415 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APT61_18135 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D APT61_18970 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D APT61_16385 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APT61_07410 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D APT61_16255 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D APT61_08510 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APT61_04215 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D APT61_08550 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APT61_04865 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APT61_18945 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D APT61_14865 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D APT61_13040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D APT61_15030 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D APT61_16975 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D APT61_02580 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D APT61_06020 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D APT61_13020 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D APT61_13015 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D APT61_12595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APT61_01835 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D APT61_00245 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D APT61_13935 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D APT61_03935 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D APT61_18130 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D APT61_06685 truA; tRNA pseudouridine(38,39,40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D APT61_02825 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D APT61_04730 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D APT61_05925 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APT61_02240 L-threonylcarbamoyladenylate synthase TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D APT61_20345 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D APT61_22100 trmE; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D APT61_00020 gidA; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D APT61_13245 selenide,water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D APT61_20115 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D APT61_22090 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D APT61_02950 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D APT61_12680 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D APT61_21710 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D APT61_16485 ribonuclease I K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21] D APT61_09625 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D APT61_08865 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D APT61_18360 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D APT61_19110 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D APT61_21385 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D APT61_21380 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D APT61_18375 tRNA glutamyl-Q synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D APT61_17080 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D APT61_20915 tRNA dihydrouridine synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D APT61_02345 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D APT61_07305 tRNA dihydrouridine synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D APT61_16330 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D APT61_08530 tRNA (uridine-5-oxyacetic acid methyl ester)(34) synthase TrmP K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D APT61_08525 tRNA 5-methoxyuridine(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D APT61_14910 SAM-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D APT61_19070 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D APT61_00710 tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D APT61_05595 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D APT61_05735 methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D APT61_21750 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D APT61_05915 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D APT61_21545 tRNA (cytosine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D APT61_05755 tRNA (adenosine(37)-N6)-methyltransferase TrmM K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D APT61_04580 tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D APT61_05375 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D APT61_18860 bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D APT61_13795 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D APT61_09940 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D APT61_01440 tRNA 2-thiouridine(34) synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D APT61_02015 tRNA 2-thiouridine(34) synthase TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D APT61_02010 tRNA 2-thiouridine(34) synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D APT61_02005 tRNA 2-thiouridine(34) synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D APT61_14710 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D APT61_05935 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D APT61_04175 ygfZ; global regulator K06980 ygfZ; tRNA-modifying protein YgfZ D APT61_19850 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D APT61_06655 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmD/FAD-dependent cmnm(5)s(2)U34 oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D APT61_17480 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D APT61_17285 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D APT61_04650 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D APT61_04645 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D APT61_04560 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D APT61_20370 tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D APT61_17010 tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D APT61_17475 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D APT61_17390 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D APT61_18165 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D APT61_06210 tRNA cytosine(34) acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D APT61_08850 tRNA N6-adenosine(37)-N6-threonylcarbamoyltransferase complex dimerization subunit TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D APT61_03455 tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D APT61_20360 tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D APT61_04505 sulfur acceptor protein CsdL K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D APT61_20310 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D APT61_02835 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D APT61_18710 twitching motility protein PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:lax03012] D APT61_09595 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D APT61_02815 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D APT61_13035 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D APT61_01965 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D APT61_11180 ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D APT61_18255 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D APT61_02035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D APT61_21230 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D APT61_02030 fusA; elongation factor G K02355 fusA; elongation factor G D APT61_10945 fusA; elongation factor G K02355 fusA; elongation factor G D APT61_21485 selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor D APT61_09190 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D APT61_18245 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D APT61_09195 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D APT61_09150 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D APT61_15075 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D APT61_07175 elongation factor P-like protein YeiP K02356 efp; elongation factor P D APT61_20470 elongation factor P K02356 efp; elongation factor P D APT61_20420 poxB regulator PoxA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D APT61_20475 EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D APT61_06645 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D APT61_04210 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D APT61_19185 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D APT61_18145 hypothetical protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:lax03110] D APT61_15085 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D APT61_05670 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D APT61_17315 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D APT61_00560 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D APT61_17115 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D APT61_19000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APT61_05945 hscA; molecular chaperone HscA K04044 hscA; molecular chaperone HscA D APT61_07620 molecular chaperone K04046 yegD; hypothetical chaperone protein D APT61_20485 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APT61_18995 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D APT61_18865 djlA; molecular chaperone DjlA K05801 djlA; DnaJ like chaperone protein D APT61_05940 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D APT61_01750 hslO; molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D APT61_05565 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D APT61_22020 heat-shock protein IbpA K04080 ibpA; molecular chaperone IbpA D APT61_22015 heat-shock protein K04081 ibpB; molecular chaperone IbpB D APT61_01755 heat-shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D APT61_20490 groES; molecular chaperone GroES K04078 groES; chaperonin GroES D APT61_18290 serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D APT61_02770 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D APT61_00005 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D APT61_08440 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D APT61_21560 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APT61_13155 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D APT61_00470 cpxP; repressor CpxP K06006 cpxP; periplasmic protein CpxP/Spy D APT61_04980 hypA; hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D APT61_04975 hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D APT61_11760 twin-argninine leader-binding protein DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D APT61_19925 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D APT61_01870 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APT61_16980 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D APT61_17300 molecular chaperone K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D APT61_01995 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D APT61_20195 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D APT61_18960 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D APT61_01985 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D APT61_00815 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D APT61_00820 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D APT61_18875 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D APT61_00840 trxA; thioredoxin K03671 TXN; thioredoxin D APT61_05730 thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D APT61_17040 co-chaperone YbbN K05838 ybbN; putative thioredoxin D APT61_15345 glutaredoxin K03674 grxA; glutaredoxin 1 D APT61_11375 glutaredoxin 2 K03675 grxB; glutaredoxin 2 D APT61_21565 glutaredoxin K03676 grxC; glutaredoxin 3 D APT61_12685 glutaredoxin K07390 grxD; monothiol glutaredoxin D APT61_00140 protein disulfide isomerase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D APT61_08900 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D APT61_04200 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D APT61_20520 dipZ; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D APT61_10325 dsbG; disulfide isomerase K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:lax04131] D APT61_06000 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D APT61_13280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APT61_10210 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APT61_15955 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APT61_08605 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APT61_12870 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APT61_17115 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:lax04121] C 03051 Proteasome [BR:lax03051] D APT61_17115 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:lax03032] D APT61_18030 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D APT61_07995 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APT61_21120 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D APT61_17305 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D APT61_13010 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D APT61_14955 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D APT61_22085 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D APT61_20900 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D APT61_19280 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D APT61_03445 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D APT61_20865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_13370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_18185 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APT61_22080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APT61_02585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APT61_16395 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APT61_13955 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APT61_18025 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APT61_17130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APT61_19200 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APT61_08665 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APT61_18190 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D APT61_00150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APT61_21730 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_06365 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_12180 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein D APT61_01820 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APT61_03265 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APT61_16220 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D APT61_06160 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D APT61_07000 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D APT61_22070 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D APT61_03685 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APT61_03625 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APT61_09555 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D APT61_13240 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:lax03036] D APT61_07995 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APT61_05795 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D APT61_09380 transcriptional regulator K03746 hns; DNA-binding protein H-NS D APT61_05130 DNA-binding protein K11685 stpA; DNA-binding protein StpA D APT61_21120 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D APT61_17305 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D APT61_13010 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D APT61_14955 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D APT61_19085 transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D APT61_22085 dnaA; chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D APT61_02905 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D APT61_14725 heat-shock protein HspQ K11940 hspQ; heat shock protein HspQ D APT61_15655 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D APT61_02340 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APT61_20340 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D APT61_04080 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D APT61_09320 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APT61_15050 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APT61_10440 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D APT61_07095 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein D APT61_14895 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB D APT61_14900 condensin subunit E K03804 mukE; chromosome partition protein MukE D APT61_14905 chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF D APT61_18590 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D APT61_04715 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D APT61_01490 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APT61_08775 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APT61_18640 cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D APT61_15045 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D APT61_18645 cell division protein FtsL K03586 ftsL; cell division protein FtsL D APT61_00570 cell division protein FtsN K03591 ftsN; cell division protein FtsN D APT61_18595 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D APT61_18615 cell division protein FtsW K03588 ftsW; cell division protein FtsW D APT61_01495 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D APT61_18585 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APT61_06360 cell division protein ZipA K03528 zipA; cell division protein ZipA D APT61_04105 Z-ring-associated protein K09888 zapA; cell division protein ZapA D APT61_00535 septal ring assembly protein ZapB K09892 zapB; cell division protein ZapB D APT61_14820 cell division protein ZapC K18657 zapC; cell division protein ZapC D APT61_18555 cell division protein ZapD K18778 zapD; cell division protein ZapD D APT61_02500 hypothetical protein K06916 zapE; cell division protein ZapE D APT61_20200 hypothetical protein K07269 ytfB; cell division protein YtfB D APT61_04480 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_06280 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_20355 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D APT61_17160 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D APT61_08880 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D APT61_08875 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D APT61_08870 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D APT61_14765 SOS cell division inhibitor K13053 sulA; cell division inhibitor SulA D APT61_21700 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator D APT61_16220 replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D APT61_02405 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APT61_02410 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D APT61_02415 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D APT61_16420 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D APT61_03685 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APT61_03625 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APT61_00020 gidA; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D APT61_00015 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D APT61_00980 xerC; recombinase XerC K03733 xerC; integrase/recombinase XerC D APT61_04195 xerD; recombinase XerD K04763 xerD; integrase/recombinase XerD D APT61_07415 antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D APT61_01875 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D APT61_00155 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:lax03400] D APT61_12105 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D APT61_16175 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D APT61_05740 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D APT61_03930 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D APT61_12575 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D APT61_18565 nucleoside triphosphate hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D APT61_21695 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D APT61_07030 6-O-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D APT61_07035 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D APT61_03435 formamidopyrimidine-DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D APT61_07625 3-methyladenine DNA glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D APT61_21315 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D APT61_21670 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D APT61_16135 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D APT61_13185 exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D APT61_07210 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D APT61_21130 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D APT61_04205 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D APT61_21730 ligB; aromatic ring-opening dioxygenase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_06365 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D APT61_00150 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D APT61_20870 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D APT61_15830 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D APT61_08210 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D APT61_13145 endonuclease K05984 cho; excinuclease Cho [EC:3.1.25.-] D APT61_00990 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D APT61_21195 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D APT61_21190 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D APT61_02180 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D APT61_21740 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D APT61_13880 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D APT61_04760 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D APT61_20350 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D APT61_04410 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D APT61_07880 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D APT61_06070 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D APT61_17395 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D APT61_08655 DNA polymerase III subunit epsilon K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D APT61_18185 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D APT61_22080 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D APT61_02585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D APT61_16395 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D APT61_13955 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D APT61_18025 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D APT61_17130 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D APT61_19200 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D APT61_08665 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D APT61_20865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_13370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_01820 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APT61_03265 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APT61_08000 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D APT61_04465 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D APT61_04455 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D APT61_04470 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D APT61_04855 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D APT61_08570 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D APT61_08575 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D APT61_08565 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D APT61_12410 endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D APT61_00580 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D APT61_20220 primosomal replication protein N K02686 priB; primosomal replication protein N D APT61_17145 primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D APT61_19275 primosomal protein DnaI K02317 dnaT; DNA replication protein DnaT D APT61_17525 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D APT61_17520 exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D APT61_19120 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D APT61_22075 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D APT61_21755 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D APT61_05805 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D APT61_17120 recR; recombination protein RecR K06187 recR; recombination protein RecR D APT61_05555 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D APT61_17535 recombination associated protein K03554 rdgC; recombination associated protein RdgC D APT61_07105 ATP-dependent helicase K19789 radD; DNA repair protein RadD D APT61_02560 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D APT61_07000 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D APT61_22070 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D APT61_09555 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D APT61_21120 DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D APT61_17305 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D APT61_13765 hypothetical protein K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-] D APT61_12495 hypothetical protein K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-] D APT61_02340 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D APT61_13010 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D APT61_14955 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D APT61_01015 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D APT61_09380 transcriptional regulator K03746 hns; DNA-binding protein H-NS D APT61_17950 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D APT61_10265 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D APT61_10250 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D APT61_20945 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D APT61_18850 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D APT61_14145 damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I D APT61_13705 XRE family transcriptional regulator K12149 dinI; DNA-damage-inducible protein I D APT61_03280 damage-inducible protein DinI K12149 dinI; DNA-damage-inducible protein I D APT61_04860 recX; recombination regulator RecX K03565 recX; regulatory protein D APT61_00825 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D APT61_14745 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D APT61_08845 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D APT61_15740 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D APT61_05510 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D APT61_05100 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APT61_06990 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D APT61_05095 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D APT61_06985 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:lax03029] D APT61_02815 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D APT61_13035 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D APT61_18255 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D APT61_02035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D APT61_21230 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D APT61_02030 fusA; elongation factor G K02355 fusA; elongation factor G D APT61_10945 fusA; elongation factor G K02355 fusA; elongation factor G D APT61_05800 GTPase Era K03595 era; GTPase D APT61_12595 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D APT61_16385 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D APT61_08550 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D APT61_08510 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D APT61_20865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_13370 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D APT61_18220 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D APT61_19000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APT61_05565 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D APT61_20485 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APT61_20490 groES; molecular chaperone GroES K04078 groES; chaperonin GroES D APT61_18995 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D APT61_05925 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D APT61_05940 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D APT61_12685 glutaredoxin K07390 grxD; monothiol glutaredoxin D APT61_07415 antiporter K03593 mrp; ATP-binding protein involved in chromosome partitioning D APT61_17365 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D APT61_22095 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APT61_17115 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:lax02000] D APT61_14945 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D APT61_17260 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D APT61_17255 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D APT61_05415 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D APT61_06555 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D APT61_15065 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D APT61_15060 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D APT61_15100 macrolide transporter K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D APT61_07040 multidrug transporter membrane component/ATP-binding component K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D APT61_14805 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D APT61_06305 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D APT61_00485 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D APT61_06310 sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D APT61_06315 cysW; sulfate/thiosulfate transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein D APT61_06320 sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D APT61_15920 modA; molybdate transporter K02020 modA; molybdate transport system substrate-binding protein D APT61_15915 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein D APT61_15910 modC; molybdate transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D APT61_15930 molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D APT61_09250 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D APT61_09255 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D APT61_09260 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D APT61_17665 tauA; taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D APT61_17655 taurine transporter subunit K15552 tauC; taurine transport system permease protein D APT61_17660 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D APT61_14835 alkanesulfonate transporter substrate-binding subunit K15553 ssuA; sulfonate transport system substrate-binding protein D APT61_14845 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D APT61_14850 ssuB; aliphatic sulfonate ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D APT61_17685 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D APT61_14635 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D APT61_10965 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D APT61_17690 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D APT61_14625 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D APT61_10970 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D APT61_17695 fbpC; ferric transporter ATP-binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D APT61_14630 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D APT61_10960 ABC transporter substrate-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D APT61_18810 tbpA; thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein D APT61_18815 thiP; thiamine ABC transporter permease K02063 thiP; thiamine transport system permease protein D APT61_18820 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D APT61_13845 potD; spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D APT61_13840 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D APT61_13835 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D APT61_13830 potA; Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D APT61_15325 spermidine/putrescine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D APT61_15310 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D APT61_15315 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D APT61_15320 potG; putrescine transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D APT61_10670 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D APT61_10685 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D APT61_10680 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D APT61_10675 polyamine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D APT61_04940 proX; glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D APT61_04945 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D APT61_04950 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D APT61_07370 osmoprotectant uptake system substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D APT61_12000 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D APT61_07375 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D APT61_07385 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D APT61_11995 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D APT61_12005 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D APT61_07380 ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D APT61_12010 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D APT61_13195 hypothetical protein K05777 ynjB; putative thiamine transport system substrate-binding protein D APT61_13200 thiamine ABC transporter permease K05778 ynjC; putative thiamine transport system permease protein D APT61_13205 sulfate ABC transporter ATP-binding protein K05779 ynjD; putative thiamine transport system ATP-binding protein D APT61_11795 lipid kinase K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D APT61_11790 lipid kinase K02050 ABC.SN.P; NitT/TauT family transport system permease protein D APT61_11785 lauroyl acyltransferase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D APT61_20985 malE; maltose ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D APT61_20990 malF; maltose transporter K10109 malF; maltose/maltodextrin transport system permease protein D APT61_20995 malG; maltose transporter permease K10110 malG; maltose/maltodextrin transport system permease protein D APT61_20980 maltose/maltodextrin transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APT61_09735 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D APT61_08365 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D APT61_08375 araH; L-arabinose transporter permease K10538 araH; L-arabinose transport system permease protein D APT61_08370 araG; L-arabinose transporter ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D APT61_04320 sugar ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein D APT61_20805 sugar ABC transporter substrate-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein D APT61_04335 sugar ABC transporter permease K10193 togM; oligogalacturonide transport system permease protein D APT61_04330 sugar ABC transporter permease K10194 togN; oligogalacturonide transport system permease protein D APT61_04325 sugar ABC transporter ATP-binding protein K10195 togA; oligogalacturonide transport system ATP-binding protein D APT61_07260 sugar ABC transporter substrate-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein D APT61_07270 mglC; beta-methylgalactoside transporter permease K10541 mglC; methyl-galactoside transport system permease protein D APT61_07265 sugar ABC transporter ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D APT61_21410 xylF; D-xylose transporter subunit XylF K10543 xylF; D-xylose transport system substrate-binding protein D APT61_21420 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D APT61_21415 D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D APT61_00420 ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D APT61_00410 branched-chain amino acid ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D APT61_00405 branched-chain amino acid ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D APT61_00415 D-ribose transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D APT61_00070 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D APT61_20735 transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D APT61_00065 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D APT61_20730 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D APT61_00060 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APT61_20725 D-ribose transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D APT61_20065 sugar ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D APT61_20050 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D APT61_20055 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D APT61_20060 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D APT61_16685 D-ribose ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D APT61_16700 sugar ABC transporter permease K17203 eryF; erythritol transport system permease protein D APT61_16695 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D APT61_01550 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D APT61_01555 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D APT61_01560 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D APT61_01565 ugpC; glycerol-3-phosphate transporter ATP-binding subunit K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D APT61_03130 autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein D APT61_03120 ABC transporter permease K10556 lsrC; AI-2 transport system permease protein D APT61_03125 autoinducer 2 import system permease LsrD K10557 lsrD; AI-2 transport system permease protein D APT61_03115 ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein D APT61_02685 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D APT61_02680 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D APT61_02675 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D APT61_02690 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D APT61_02695 phospholipid ABC transporter substrate-binding protein K07122 mlaB; phospholipid transport system transporter-binding protein D APT61_09695 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D APT61_09705 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D APT61_08255 LacI family transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D APT61_16560 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D APT61_16565 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D APT61_08240 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D APT61_08245 sugar ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D APT61_08250 lipase K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D APT61_16570 ABC transporter K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D APT61_22175 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D APT61_22170 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D APT61_22165 pstA; phosphate transporter permease subunit PtsA K02038 pstA; phosphate transport system permease protein D APT61_22160 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D APT61_20650 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D APT61_20655 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein D APT61_20645 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D APT61_04270 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APT61_06725 histidine ABC transporter substrate-binding protein HisJ K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APT61_10545 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D APT61_06740 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D APT61_06735 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D APT61_06745 amino acid transporter K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D APT61_06730 histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein D APT61_15660 glnH; glutamine ABC transporter substrate-bindnig protein K10036 glnH; glutamine transport system substrate-binding protein D APT61_15665 glnP; glutamine ABC transporter permease K10037 glnP; glutamine transport system permease protein D APT61_15670 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D APT61_15285 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D APT61_15270 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D APT61_15280 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D APT61_15275 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D APT61_15265 arginine ABC transporter ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D APT61_16355 amino acid transporter K10001 gltI; glutamate/aspartate transport system substrate-binding protein D APT61_16365 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D APT61_16360 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D APT61_16370 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D APT61_02310 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D APT61_02305 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D APT61_02300 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D APT61_02295 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D APT61_08175 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D APT61_08185 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D APT61_08190 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D APT61_01505 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_11035 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_08300 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_01525 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D APT61_11055 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D APT61_08295 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APT61_01530 branched-chain amino acid transporter permease subunit LivH K01997 livH; branched-chain amino acid transport system permease protein D APT61_01535 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D APT61_11050 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein D APT61_08290 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D APT61_11045 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_08285 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_01540 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D APT61_01545 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_11040 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_08280 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D APT61_21855 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein D APT61_18120 metQ; DL-methionine transporter substrate-binding subunit K02073 metQ; D-methionine transport system substrate-binding protein D APT61_12855 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D APT61_18115 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D APT61_12860 methionine import system permease MetP K02072 metI; D-methionine transport system permease protein D APT61_18110 metN; DL-methionine transporter ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein D APT61_12865 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D APT61_11635 branched-chain amino acid ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D APT61_11630 urea ABC transporter permease K11960 urtB; urea transport system permease protein D APT61_11625 urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D APT61_11620 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D APT61_11615 urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D APT61_15835 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D APT61_10840 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D APT61_10860 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D APT61_10850 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D APT61_10855 ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D APT61_09400 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_09780 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_14700 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D APT61_09405 oppB; oligopeptide transporter permease K15581 oppB; oligopeptide transport system permease protein D APT61_09410 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D APT61_09415 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein D APT61_09420 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D APT61_21280 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_10600 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_10730 peptide ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D APT61_21275 peptide transporter K12369 dppB; dipeptide transport system permease protein D APT61_21270 peptide transporter K12370 dppC; dipeptide transport system permease protein D APT61_21265 dppD; peptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D APT61_21260 dppF; peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D APT61_09660 peptide ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D APT61_09655 peptide ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D APT61_09650 peptide ABC transporter permease K19228 sapC; cationic peptide transport system permease protein D APT61_09645 peptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D APT61_09640 peptide ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D APT61_15545 glutathione ABC transporter substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D APT61_15540 glutathione ABC transporter permease K13890 gsiC; glutathione transport system permease protein D APT61_15535 glutathione ABC transporter permease K13891 gsiD; glutathione transport system permease protein D APT61_15550 glutathione ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D APT61_16765 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APT61_11155 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APT61_07515 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APT61_03820 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D APT61_16770 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D APT61_11150 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D APT61_07520 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D APT61_03825 peptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D APT61_16775 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APT61_11145 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APT61_07525 D-ala-D-ala transporter subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APT61_03830 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D APT61_11140 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APT61_07530 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APT61_16780 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APT61_03835 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D APT61_07535 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D APT61_16785 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D APT61_03840 peptide ABC transporter substrate-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D APT61_07135 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D APT61_07130 microcin ABC transporter permease K13895 yejE; microcin C transport system permease protein D APT61_07125 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D APT61_18335 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D APT61_18330 iron ABC transporter K23228 fhuB; ferric hydroxamate transport system permease protein D APT61_18340 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D APT61_12965 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D APT61_12970 iron ABC transporter K25133 hmuU; heme transport system permease protein D APT61_12975 hmuV; hemin importer ATP-binding subunit K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D APT61_16635 iron-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D APT61_16645 iron-enterobactin transporter K23186 fepD; iron-siderophore transport system permease protein D APT61_16650 iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein D APT61_16655 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D APT61_04790 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D APT61_19020 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D APT61_12160 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D APT61_03805 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D APT61_04785 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D APT61_19010 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D APT61_12165 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D APT61_04780 sugar ABC transporter substrate-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D APT61_19015 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D APT61_12170 histidinol phosphatase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D APT61_18305 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D APT61_13005 Vitamin B12 import system permease BtuC K06073 btuC; vitamin B12 transport system permease protein D APT61_12995 vitamin B12-transporter ATPase K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D APT61_08590 znuA; zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D APT61_08580 znuB; high-affinity zinc transporter membrane component K09816 znuB; zinc transport system permease protein D APT61_08585 znuC; Mn2+/Zn2+ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D APT61_19385 ABC transporter K09688 kpsM; capsular polysaccharide transport system permease protein D APT61_19395 sugar transporter K10107 kpsE; capsular polysaccharide transport system permease protein D APT61_19390 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D APT61_02595 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D APT61_02600 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D APT61_02645 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D APT61_15770 hypothetical protein K25180 ybhR; drug efflux transport system permease protein D APT61_15765 hypothetical protein K25181 ybhS; drug efflux transport system permease protein D APT61_15760 multidrug ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D APT61_15755 efflux transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG D APT61_13860 outer membrane-specific lipoprotein transporter subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D APT61_13870 outer membrane-specific lipoprotein transporter subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D APT61_13865 lolD; lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D APT61_01495 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D APT61_01490 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D APT61_18415 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D APT61_18420 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D APT61_17020 sugar ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D APT61_17025 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D APT61_12900 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D APT61_06375 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D APT61_12730 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D APT61_20940 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D APT61_07910 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D APT61_04020 D-galactose transporter GalP K08137 galP; MFS transporter, SP family, galactose:H+ symporter D APT61_04310 arabinose:proton symporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D APT61_00390 lacY; galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D APT61_09135 galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D APT61_03640 MFS sugar transporter K02532 lacY; MFS transporter, OHS family, lactose permease D APT61_21935 sugar:proton symporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D APT61_07185 sugar transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D APT61_18800 sugar transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D APT61_03915 nucleoside permease K03289 nupG; MFS transporter, NHS family, nucleoside permease D APT61_05705 alpha-ketoglutarate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D APT61_20615 glycine/betaine ABC transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D APT61_10220 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D APT61_20300 metabolite-proton symporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D APT61_19025 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D APT61_07930 shikimate transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D APT61_11710 MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D APT61_21305 hypothetical protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D APT61_05450 sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter D APT61_04590 glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D APT61_22040 hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D APT61_03060 hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D APT61_14675 hypothetical protein K13021 ttuB; MFS transporter, ACS family, tartrate transporter D APT61_08985 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease D APT61_19335 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease D APT61_02930 galactonate transporter K12299 garP; MFS transporter, ACS family, probable galactarate transporter D APT61_13460 hypothetical protein K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D APT61_05890 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D APT61_06970 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D APT61_17680 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D APT61_09290 nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APT61_11010 nitrate/nitrite transporter NarK K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D APT61_04395 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D APT61_16640 enterobactin transporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D APT61_17340 ampG; AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D APT61_07115 bicyclomycin/multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D APT61_18745 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D APT61_21985 emrD; multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D APT61_11115 MFS transporter K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein D APT61_11560 arabinose transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D APT61_15425 multidrug transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D APT61_17590 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D APT61_14180 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D APT61_14130 multidrug resistance protein MdtH K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D APT61_22115 multidrug transporter K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein D APT61_21915 nepI; ribonucleoside transporter K03445 nepI; MFS transporter, DHA1 family, purine ribonucleoside efflux pump D APT61_12700 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D APT61_10445 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D APT61_18060 MFS sugar transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D APT61_04920 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D APT61_11815 disulfide bond formation protein DsbA K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D APT61_15615 disulfide bond formation protein DsbA K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D APT61_11020 methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D APT61_08740 multidrug MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D APT61_11340 transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D APT61_07600 transporter K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D APT61_17090 Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D APT61_12035 hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D APT61_15010 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D APT61_01865 transporter K06141 tsgA; MFS transporter, TsgA protein D APT61_17820 metabolite transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D APT61_06340 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D APT61_04420 phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D APT61_06345 PTS sugar transporter K02784 ptsH; phosphocarrier protein HPr D APT61_02620 phosphohistidinoprotein-hexose phosphotransferase K08485 ptsO; phosphocarrier protein NPr D APT61_00630 multifunctional phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system fructose-like transporter subunit IIA K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-] D APT61_07190 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D APT61_06335 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D APT61_13945 PTS glucose-specific subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D APT61_16960 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D APT61_16260 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APT61_04815 PTS N-acetyl-D-glucosamine transporter K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D APT61_05985 PTS glucose transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_12210 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D APT61_05835 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D APT61_07315 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D APT61_03870 PTS sugar transporter K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D APT61_04800 PTS cellobiose transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D APT61_19940 PTS maltose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D APT61_14605 PTS fructose transporter subunit IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D APT61_14615 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APT61_07200 PTS fructose transporter subunit EIIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D APT61_14610 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202] D APT61_00640 PTS fructose-like transporter subunit EIIB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D APT61_00655 PTS fructose-like transporter subunit EIIB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D APT61_00635 PTS fructose-like transporter subunit EIIC K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D APT61_21510 PTS mannitol transporter subunit IIABC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D APT61_16080 PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195] D APT61_13120 PTS N N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_21900 molecular chaperone TorD K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_21185 PTS lactose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D APT61_13130 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_21885 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_21180 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D APT61_04365 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_13125 PTS N N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_21890 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_19235 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D APT61_08805 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D APT61_08800 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D APT61_08795 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D APT61_15495 PTS sugar transporter K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-] D APT61_15490 PTS sugar transporter K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-] D APT61_15485 PTS sugar transporter K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component D APT61_15480 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component D APT61_20250 PTS ascorbate-specific transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APT61_14585 cmtB; PTS mannitol transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D APT61_20255 PTS L-ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APT61_14590 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D APT61_20260 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D APT61_14595 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component D APT61_02630 transcriptional regulator K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D APT61_15120 aquaporin Z K06188 aqpZ; aquaporin Z D APT61_00530 aquaporin K02440 glpF; glycerol uptake facilitator D APT61_17245 ammonium transporter K03320 amt; ammonium transporter, Amt family D APT61_20835 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_15450 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_06770 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_12585 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_11985 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D APT61_02515 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A D APT61_14705 hypothetical protein K19416 yccA; modulator of FtsH protease D APT61_14990 formate transporter FocA K06212 focA; formate transporter D APT61_01845 nitrite transporter NirC K02598 nirC; nitrite transporter D APT61_02200 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D APT61_17150 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel D APT61_20405 mechanosensitive channel protein K22051 mscM; miniconductance mechanosensitive channel D APT61_04065 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D APT61_15675 mechanosensitive channel protein K22044 ybiO; moderate conductance mechanosensitive channel D APT61_16885 miniconductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel D APT61_07045 dihydroorotate dehydrogenase K06213 mgtE; magnesium transporter D APT61_08405 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D APT61_08410 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D APT61_03740 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D APT61_03745 protein TolR K03559 exbD; biopolymer transport protein ExbD D APT61_16045 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D APT61_16040 protein TolR K03560 tolR; biopolymer transport protein TolR D APT61_00995 magnesium transporter CorA K03284 corA; magnesium transporter D APT61_09930 zntB; zinc transporter K16074 zntB; zinc transporter D APT61_16465 camphor resistance protein CrcB K06199 crcB; fluoride exporter D APT61_11440 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D APT61_08265 hypothetical protein K08363 merT; mercuric ion transport protein D APT61_08270 heavy metal transporter K08364 merP; periplasmic mercuric ion binding protein D APT61_20100 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APT61_05570 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APT61_07980 hypothetical protein K09476 ompF; outer membrane pore protein F D APT61_14870 hypothetical protein K09476 ompF; outer membrane pore protein F D APT61_17925 porin K11929 phoE; outer membrane pore protein E D APT61_07020 hypothetical protein K09475 ompC; outer membrane pore protein C D APT61_09960 porin K14062 ompN; outer membrane protein N D APT61_21905 lactam utilization protein LamB K02024 lamB; maltoporin D APT61_20975 lamB; maltoporin K02024 lamB; maltoporin D APT61_14660 lactam utilization protein LamB K02024 lamB; maltoporin D APT61_17720 porin K16077 scrY; sucrose porin D APT61_22150 porin K10124 bglH; carbohydrate-specific outer membrane porin D APT61_14770 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D APT61_15645 ompX; outer membrane protein OmpX K11934 ompX; outer membrane protein X D APT61_06595 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein D APT61_17445 nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D APT61_08445 fimbrial assembly protein K07347 fimD; outer membrane usher protein D APT61_15725 fimbrial assembly protein K07347 fimD; outer membrane usher protein D APT61_16675 outer membrane receptor protein K19611 fepA; ferric enterobactin receptor D APT61_15690 catecholate siderophore receptor Fiu K16090 fiu; catecholate siderophore receptor D APT61_00715 btuB; vitamin B12/cobalamin outer membrane transporter K16092 btuB; vitamin B12 transporter D APT61_13940 ferric-rhodotorulic acid transporter K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D APT61_07230 catecholate siderophore receptor CirA K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D APT61_11325 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D APT61_12955 ligand-gated channel protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D APT61_13440 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APT61_18345 ferrichrome ABC transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APT61_10765 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APT61_16835 ferrichrysobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APT61_19620 ferrioxamine B receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APT61_11960 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APT61_16930 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D APT61_03600 hypothetical protein K12340 tolC; outer membrane protein D APT61_05420 type I secretion protein TolC K12543 lapE; outer membrane protein, adhesin transport system D APT61_13515 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system D APT61_06550 channel protein TolC K12543 lapE; outer membrane protein, adhesin transport system D APT61_10165 transporter K18139 oprM; outer membrane protein, multidrug efflux system D APT61_15610 RND transporter K18904 nodT; outer membrane protein, multidrug efflux system D APT61_20600 capsular biosynthesis protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D APT61_07425 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D APT61_07655 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D APT61_09740 hypothetical protein K14053 ompG; outer membrane protein G D APT61_18220 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D APT61_06030 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D APT61_06195 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC D APT61_05655 membrane biogenesis protein K05807 bamD; outer membrane protein assembly factor BamD D APT61_05550 membrane biogenesis protein K06186 bamE; outer membrane protein assembly factor BamE D APT61_20090 hypothetical protein K07278 tamA; translocation and assembly module TamA D APT61_20085 translocation and assembly module TamB K09800 tamB; translocation and assembly module TamB D APT61_04290 porin K22110 kdgM; oligogalacturonate-specific porin family protein D APT61_00590 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein D APT61_00190 ompL; porin K22110 kdgM; oligogalacturonate-specific porin family protein D APT61_02650 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D APT61_02655 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D APT61_18870 LPS biosynthesis protein K04744 lptD; LPS-assembly protein D APT61_16390 LPS biosynthesis protein K03643 lptE; LPS-assembly lipoprotein D APT61_03200 hypothetical protein K20543 bcsC; cellulose synthase operon protein C D APT61_20605 capsular biosynthesis protein K20920 vpsM; polysaccharide biosynthesis protein VpsM D APT61_16345 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D APT61_20815 murein hydrolase regulator LrgA K06518 cidA; holin-like protein D APT61_07290 hypothetical protein K06518 cidA; holin-like protein D APT61_08500 MFS transporter K16210 togT; oligogalacturonide transporter D APT61_16920 aromatic amino acid transporter K11732 pheP; phenylalanine-specific permease D APT61_07225 lysine transporter K11733 lysP; lysine-specific permease D APT61_18500 amino acid permease K11734 aroP; aromatic amino acid transport protein AroP D APT61_17500 proY; proline-specific permease K11736 proY; proline-specific permease ProY D APT61_20190 amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter D APT61_10785 L-asparagine permease K11738 ansP; L-asparagine permease D APT61_17775 amino acid transporter K16235 mmuP; S-methylmethionine transporter D APT61_12140 arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D APT61_20495 transporter K16263 yjeH; amino acid efflux transporter D APT61_15970 zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein D APT61_00475 fieF; cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF D APT61_03580 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D APT61_17165 multidrug transporter K18138 acrB; multidrug efflux pump D APT61_16810 multidrug RND transporter K18138 acrB; multidrug efflux pump D APT61_06235 multidrug transporter K18324 acrD; multidrug efflux pump D APT61_02320 multidrug transporter K18142 acrF; multidrug efflux pump D APT61_07610 multidrug transporter K07788 mdtB; multidrug efflux pump D APT61_07605 multidrug transporter K07789 mdtC; multidrug efflux pump D APT61_20450 multidrug transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D APT61_12060 multidrug transporter K11742 mdtI; spermidine export protein MdtI D APT61_12065 multidrug transporter K11743 mdtJ; spermidine export protein MdtJ D APT61_11585 acetylserine transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D APT61_15650 threonine transporter K11939 rhtA; inner membrane transporter RhtA D APT61_01000 chloramphenical resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD D APT61_05380 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APT61_05385 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APT61_10740 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D APT61_11725 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D APT61_01685 gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter D APT61_01610 gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D APT61_20620 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D APT61_20510 C4-dicarboxylate ABC transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D APT61_08350 C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D APT61_21530 L-lactate permease K00427 lldP; L-lactate permease D APT61_10565 potassium-tellurite ethidium and proflavin transporter K03304 tehA; tellurite resistance protein D APT61_09215 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter D APT61_02670 calcium:proton antiporter K07301 yrbG; cation:H+ antiporter D APT61_01305 phosphate transporter PitA K16322 pit; low-affinity inorganic phosphate transporter D APT61_02360 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter D APT61_14365 proline:sodium symporter PutP K11928 putP; sodium/proline symporter D APT61_20790 actP; cation acetate symporter K14393 actP; cation/acetate symporter D APT61_20775 glutamate:protein symporter K11102 gltP; proton glutamate symport protein D APT61_01195 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein D APT61_03075 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D APT61_21760 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D APT61_18990 nhaA; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D APT61_08905 nhaB; Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D APT61_20825 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D APT61_08930 cvrA; K+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D APT61_18905 potassium transporter KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC D APT61_18910 potassium transporter KefF K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF D APT61_01975 potassium transporter KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D APT61_01970 glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D APT61_17095 cation:proton antiport protein K26735 KEA4_5_6; K+:H+ antiporter D APT61_01140 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D APT61_02205 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein D APT61_06155 uracil/xanthine transporter K02824 uraA; uracil permease D APT61_14415 pyrimidine utilization transport protein G K09016 rutG; putative pyrimidine permease RutG D APT61_21765 xanthine permease XanP K16345 xanP; xanthine permease XanP D APT61_22135 adenine permease PurP K06901 pbuG; adenine/guanine/hypoxanthine permease D APT61_05160 xanthine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D APT61_20830 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D APT61_06445 nucleoside permease K11535 nupC; nucleoside transport protein D APT61_08310 tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein D APT61_02850 tryptophan permease K03835 mtr; tryptophan-specific transport protein D APT61_22110 tryptophan permease K03836 tnaB; low affinity tryptophan permease D APT61_04550 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D APT61_10355 AAA family ATPase K03837 sdaC; serine transporter D APT61_02975 HAAAP family serine/threonine permease K03838 tdcC; threonine transporter D APT61_02990 hypothetical protein K26604 cyuP; cysteine uptake transport protein D APT61_10620 benzoate transporter K05782 benE; benzoate membrane transport protein D APT61_18320 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family D APT61_12015 voltage-gated chloride channel protein ClcB K03281 clcA; chloride channel protein, CIC family D APT61_06470 ion channel protein K03281 clcA; chloride channel protein, CIC family D APT61_05070 nickel transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D APT61_09165 transporter K03321 TC.SULP; sulfate permease, SulP family D APT61_07050 transporter K03321 TC.SULP; sulfate permease, SulP family D APT61_06450 divalent metal cation transporter K03322 mntH; manganese transport protein D APT61_21045 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D APT61_20135 arsenic transporter K03893 arsB; arsenical pump membrane protein D APT61_16480 dcuC; anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D APT61_00880 O-antigen translocase K16693 wzxE; enterobacterial common antigen flippase D APT61_07735 colanic acid transporter K16695 wzxC; lipopolysaccharide exporter D APT61_14110 murein biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D APT61_01945 transporter K13936 mdcF; malonate transporter and related proteins D APT61_00050 trkD; potassium transport protein Kup K03549 kup; KUP system potassium uptake protein D APT61_04070 arginine transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D APT61_01025 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D APT61_01020 threonine transporter K05835 rhtC; threonine efflux protein D APT61_19535 threonine transporter RhtB K05835 rhtC; threonine efflux protein D APT61_09435 leucine efflux protein K11250 leuE; leucine efflux protein D APT61_00370 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D APT61_09080 branched-chain amino acid permease K26605 azlC; branched chain amino acid efflux pump D APT61_00365 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D APT61_09085 branched-chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump D APT61_02450 p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB D APT61_06175 permease K03548 perM; putative permease D APT61_01435 hypothetical protein K09125 yhhQ; queuosine precursor transporter D APT61_11565 hypothetical protein K05595 marC; multiple antibiotic resistance protein D APT61_18615 cell division protein FtsW K03588 ftsW; cell division protein FtsW D APT61_08785 hypothetical protein K23242 mntP; manganese efflux pump family protein D APT61_14350 iron permease K07243 FTR; high-affinity iron transporter D APT61_14345 ferrous iron transporter K07224 efeO; iron uptake system component EfeO D APT61_14340 peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D APT61_05905 nickel transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D APT61_19490 carbon starvation protein A K23676 btsT; pyruvate/proton symporter D APT61_09445 energy transducer TonB K03832 tonB; periplasmic protein TonB D APT61_16025 peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D APT61_16035 tolA; protein TolA K03646 tolA; colicin import membrane protein D APT61_16030 tolB; translocation protein TolB K03641 tolB; TolB protein D APT61_01920 malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D APT61_01930 malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D APT61_10330 copper resistance protein K08344 scsB; suppressor for copper-sensitivity B D APT61_09295 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APT61_11005 narZ; nitrate reductase K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D APT61_09300 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APT61_11000 narH; nitrate reductase K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D APT61_09310 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APT61_10990 narI; nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D APT61_11090 sulfate ABC transporter substrate-binding protein K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APT61_11095 formate dehydrogenase K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D APT61_11100 formate dehydrogenase K08349 fdnH; formate dehydrogenase-N, beta subunit D APT61_11105 formate dehydrogenase K08350 fdnI; formate dehydrogenase-N, gamma subunit D APT61_11755 dimethylsulfoxide reductase K07312 ynfH; Tat-targeted selenate reductase subunit YnfH D APT61_11745 dimethyl sulfoxide reductase subunit A K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9] D APT61_15025 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D APT61_15020 dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D APT61_11750 dimethyl sulfoxide reductase subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D APT61_15015 dimethyl sulfoxide reductase K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C D APT61_21325 trimethylamine N-oxide reductase I catalytic subunit K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D APT61_14530 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A D APT61_14540 tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B D APT61_14535 tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C D APT61_04925 multidrug transporter K03543 emrA; membrane fusion protein, multidrug efflux system D APT61_11820 efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D APT61_15620 multidrug export protein EmrA K03543 emrA; membrane fusion protein, multidrug efflux system D APT61_05410 secretion protein HlyD K12542 lapC; membrane fusion protein, adhesin transport system D APT61_13505 hemolysin secretion protein D K12542 lapC; membrane fusion protein, adhesin transport system D APT61_06560 hemolysin secretion protein D K12542 lapC; membrane fusion protein, adhesin transport system D APT61_17160 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D APT61_02325 efflux transporter periplasmic adaptor subunit K18141 acrE; membrane fusion protein, multidrug efflux system D APT61_07615 efflux transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D APT61_15105 efflux transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D APT61_02445 efflux transporter periplasmic adaptor subunit K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA D APT61_20595 capsular biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D APT61_07435 protein-tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APT61_07665 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D APT61_15975 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D APT61_01720 feoA; ferrous iron transporter A K04758 feoA; ferrous iron transport protein A D APT61_01715 feoB; ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D APT61_01710 ferrous iron transporter C K07490 feoC; ferrous iron transport protein C D APT61_17620 microcin B17 transporter K17938 sbmA; peptide/bleomycin uptake transporter D APT61_01295 universal stress protein UspB K06144 uspB; universal stress protein B D APT61_20465 entericidin K16347 ecnA; entericidin A D APT61_20460 entericidin B membrane lipoprotein K16348 ecnB; entericidin B D APT61_21840 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D APT61_08675 hypothetical protein K07245 pcoD; copper resistance protein D D APT61_08670 hypothetical protein K07156 copC; copper resistance protein C D APT61_13425 MltA-interacting protein MipA K07274 mipA; MipA family protein D APT61_21465 hypothetical protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:lax02044] D APT61_03600 hypothetical protein K12340 tolC; outer membrane protein D APT61_05415 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D APT61_06555 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D APT61_05410 secretion protein HlyD K12542 lapC; membrane fusion protein, adhesin transport system D APT61_13505 hemolysin secretion protein D K12542 lapC; membrane fusion protein, adhesin transport system D APT61_06560 hemolysin secretion protein D K12542 lapC; membrane fusion protein, adhesin transport system D APT61_05420 type I secretion protein TolC K12543 lapE; outer membrane protein, adhesin transport system D APT61_13515 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system D APT61_06550 channel protein TolC K12543 lapE; outer membrane protein, adhesin transport system D APT61_15235 peptidoglycan-binding protein K02450 gspA; general secretion pathway protein A D APT61_15230 type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D APT61_15225 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D APT61_15220 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D APT61_15215 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D APT61_15210 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D APT61_15205 type II secretion system protein GspH K02457 gspH; general secretion pathway protein H D APT61_15200 type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D APT61_15195 type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D APT61_15190 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D APT61_15185 type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D APT61_15175 general secretion pathway protein GspO K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D APT61_03980 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D APT61_04435 hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A D APT61_04440 hypothetical protein K02680 ppdB; prepilin peptidase dependent protein B D APT61_04450 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C D APT61_18530 pilus assembly protein K02682 ppdD; prepilin peptidase dependent protein D D APT61_18535 hypothetical protein K02504 hofB; protein transport protein HofB D APT61_18540 type IV pilin biogenesis protein K02505 hofC; protein transport protein HofC D APT61_01780 DNA utilization protein HofM K12288 hofM; pilus assembly protein HofM D APT61_01785 hypothetical protein K12289 hofN; pilus assembly protein HofN D APT61_01790 hypothetical protein K12290 hofO; pilus assembly protein HofO D APT61_01795 hypothetical protein K12291 hofP; pilus assembly protein HofP D APT61_01800 hofQ; porin K02507 hofQ; protein transport protein HofQ D APT61_03970 hypothetical protein K02221 yggT; YggT family protein D APT61_17295 hypothetical protein K02237 comEA; competence protein ComEA D APT61_14950 competence protein ComEC K02238 comEC; competence protein ComEC D APT61_08490 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APT61_08485 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D APT61_08105 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D APT61_08095 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D APT61_08090 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APT61_08065 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D APT61_08060 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D APT61_08055 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D APT61_08050 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APT61_08045 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APT61_04200 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D APT61_09875 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D APT61_09815 type VI secretion system protein ImpK K11892 impK; type VI secretion system protein ImpK D APT61_09810 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D APT61_09890 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D APT61_09885 type VI secretion protein ImpG K11896 impG; type VI secretion system protein ImpG D APT61_09805 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D APT61_09800 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D APT61_04670 Hcp family T6SS protein CtsH1 K11903 hcp; type VI secretion system secreted protein Hcp D APT61_21960 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D APT61_09525 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D APT61_09825 Hcp family T6SS protein CtsH1 K11903 hcp; type VI secretion system secreted protein Hcp D APT61_10655 Hcp family T6SS protein CtsH1 K11903 hcp; type VI secretion system secreted protein Hcp D APT61_19520 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D APT61_11595 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D APT61_10875 type VI secretion protein Vgr K11904 vgrG; type VI secretion system secreted protein VgrG D APT61_09900 type VI secretion system lysozyme-like protein K11905 K11905; type VI secretion system protein D APT61_09895 type VI secretion protein K11906 vasD; type VI secretion system protein VasD D APT61_09830 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D APT61_09880 type VI secretion protein K11910 vasJ; type VI secretion system protein VasJ D APT61_09905 hypothetical protein K11911 vasL; type VI secretion system protein VasL D APT61_15715 ferrous iron transporter B K07345 fimA; major type 1 subunit fimbrin (pilin) D APT61_08440 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D APT61_08445 fimbrial assembly protein K07347 fimD; outer membrane usher protein D APT61_15725 fimbrial assembly protein K07347 fimD; outer membrane usher protein D APT61_15735 ferrous iron transporter B K07349 fimG; minor fimbrial subunit D APT61_08450 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D APT61_08435 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D APT61_08430 polyketide synthase K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D APT61_14225 csgA; curlin K04334 csgA; major curlin subunit D APT61_14230 csgB; curlin subunit CsgB K04335 csgB; minor curlin subunit D APT61_14240 curli assembly protein CsgE K04337 csgE; curli production assembly/transport component CsgE D APT61_14245 curli assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF D APT61_14250 curli production assembly/transport protein CsgG K06214 csgG; curli production assembly/transport component CsgG D APT61_18570 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D APT61_21560 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D APT61_17465 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D APT61_21225 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D APT61_17460 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D APT61_02785 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D APT61_18575 SecA regulator SecM K13301 secM; secretion monitor D APT61_02160 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D APT61_05580 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D APT61_01485 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D APT61_17470 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D APT61_22095 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D APT61_01085 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D APT61_01090 preprotein translocase K03117 tatB; sec-independent protein translocase protein TatB D APT61_01095 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D APT61_16455 tatE; preprotein translocase subunit SecE K03425 tatE; sec-independent protein translocase protein TatE C 02042 Bacterial toxins [BR:lax02042] D APT61_20100 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APT61_05570 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D APT61_04170 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:lax02022] D APT61_17510 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D APT61_17515 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D APT61_13815 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APT61_13810 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D APT61_01740 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D APT61_01735 ompR; two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D APT61_12175 sensor protein RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D APT61_12155 two-component system response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D APT61_00460 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D APT61_00465 two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D APT61_07595 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D APT61_07590 two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D APT61_02740 sensor protein BasS/PmrB K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D APT61_02745 XRE family transcriptional regulator K07771 basR; two-component system, OmpR family, response regulator BasR D APT61_03670 sensor protein QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D APT61_03675 two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D APT61_16205 sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D APT61_16210 two-component system response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D APT61_02605 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D APT61_19075 two-component system response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D APT61_11430 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D APT61_15295 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D APT61_09285 nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D APT61_09280 two-component system response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D APT61_06240 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D APT61_17675 MASE1 sensor histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D APT61_17670 two-component system response regulator K20264 fusR; two-component system, NarL family, response regulator FusR D APT61_07005 hybrid sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D APT61_07015 phosphotransfer intermediate protein in two-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D APT61_07010 two-component system response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APT61_03460 hypothetical protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D APT61_08205 sirA; two-component system response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D APT61_07975 histidine kinase K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D APT61_07970 transcriptional regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR D APT61_06485 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APT61_07395 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D APT61_06480 LytTR family transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator D APT61_07400 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator D APT61_00175 glnL; PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D APT61_00170 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D APT61_05855 histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D APT61_05865 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D APT61_08415 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APT61_08475 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APT61_08470 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APT61_06895 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D APT61_14545 histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D APT61_14550 two-component system response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D APT61_09370 response regulator of RpoS K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:lax02035] D APT61_08415 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D APT61_08420 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D APT61_08465 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D APT61_08470 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D APT61_08475 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D APT61_08480 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D APT61_06895 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D APT61_20290 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_09235 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_03790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D APT61_11475 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_19295 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_20180 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_20045 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D APT61_08455 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APT61_03155 chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D APT61_10505 chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APT61_11240 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D APT61_08460 methyl-accepting protein IV K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D APT61_03150 aerotaxis receptor Aer K03776 aer; aerotaxis receptor D APT61_10815 chemotaxis protein K03776 aer; aerotaxis receptor D APT61_08095 fliH; flagellar assembly protein H K02411 fliH; flagellar assembly protein FliH D APT61_08090 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D APT61_08085 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D APT61_08060 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ D APT61_08055 fliP; flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D APT61_08050 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D APT61_08045 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D APT61_08490 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D APT61_08485 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D APT61_08495 flagellar protein flhE K03516 flhE; flagellar protein FlhE D APT61_08100 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG D APT61_08070 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D APT61_08065 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D APT61_08105 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D APT61_14055 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D APT61_14095 flgA; flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D APT61_14060 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D APT61_08075 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D APT61_08110 fliE; flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D APT61_08080 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D APT61_14090 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D APT61_14085 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D APT61_14080 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D APT61_14070 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D APT61_14065 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D APT61_14050 flgJ; flagellar biosynthesis protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D APT61_14075 flgE; flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D APT61_14045 flgK; flagellar biosynthesis protein FlgK K02396 flgK; flagellar hook-associated protein 1 D APT61_14040 flgL; flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D APT61_14105 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D APT61_10695 flagellin K02406 fliC; flagellin D APT61_08150 flagellin K02406 fliC; flagellin D APT61_08145 flagellar cap protein FliD K02407 fliD; flagellar hook-associated protein 2 D APT61_08140 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D APT61_08135 flagellar biosynthesis protein FliT K02423 fliT; flagellar protein FliT D APT61_08395 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D APT61_08400 transcriptional regulator K02402 flhC; flagellar transcriptional activator FlhC D APT61_08165 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D APT61_08405 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D APT61_08410 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D APT61_08175 cystine transporter subunit K02424 tcyA; L-cystine transport system substrate-binding protein D APT61_08170 flagellar regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D APT61_14100 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D APT61_03980 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D APT61_15715 ferrous iron transporter B K07345 fimA; major type 1 subunit fimbrin (pilin) D APT61_08440 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D APT61_08445 fimbrial assembly protein K07347 fimD; outer membrane usher protein D APT61_15725 fimbrial assembly protein K07347 fimD; outer membrane usher protein D APT61_15735 ferrous iron transporter B K07349 fimG; minor fimbrial subunit D APT61_08450 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D APT61_08435 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D APT61_08430 polyketide synthase K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:lax04812] D APT61_02405 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APT61_18585 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APT61_18590 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D APT61_08880 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D APT61_08875 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D APT61_08870 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor C 04147 Exosome [BR:lax04147] D APT61_17115 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D APT61_04635 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D APT61_13280 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APT61_10210 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D APT61_04055 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D APT61_08605 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APT61_12870 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D APT61_01870 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D APT61_17490 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D APT61_20485 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D APT61_19000 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D APT61_21005 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D APT61_06075 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D APT61_02035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D APT61_21230 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D APT61_13935 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D APT61_11495 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D APT61_06375 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D APT61_08860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D APT61_04280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D APT61_17110 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D APT61_17135 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D APT61_00685 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D APT61_02795 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D APT61_20035 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D APT61_15945 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D APT61_01625 glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D APT61_00525 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D APT61_16725 carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D APT61_00180 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D APT61_17640 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D APT61_17580 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APT61_04090 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D APT61_21105 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D APT61_18480 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D APT61_08620 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D APT61_00500 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D APT61_15955 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D APT61_21830 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein D APT61_20445 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:lax02048] D APT61_16750 type I-F CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D APT61_16745 type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1 D APT61_16740 type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2 D APT61_16735 type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D APT61_16730 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] D APT61_01820 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APT61_03265 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D APT61_07995 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D APT61_19735 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D APT61_19740 restriction endonuclease K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D APT61_18700 small toxic polypeptide K18920 hokA; protein HokA D APT61_21810 hypothetical protein K19048 symE; toxic protein SymE D APT61_04765 hypothetical protein K19048 symE; toxic protein SymE D APT61_19780 hypothetical protein K19048 symE; toxic protein SymE D APT61_21975 type I toxin-antitoxin system toxin TisB K19148 tisB; small toxic protein TisB D APT61_10980 toxin MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D APT61_10985 PbsX family transcriptional regulator K07172 mazE; antitoxin MazE D APT61_11315 serine/threonine protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D APT61_11310 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D APT61_17175 transcriptional regulator K05839 hha; haemolysin expression modulating protein D APT61_17170 Hha toxicity attenuator K19162 tomB; hha toxicity modulator TomB D APT61_09680 phage shock protein C K03973 pspC; phage shock protein C D APT61_09675 pspB; phage shock protein B K03970 pspB; phage shock protein B D APT61_18710 twitching motility protein PilT K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D APT61_18705 virulence factor K18829 mvpT; antitoxin VapB D APT61_19895 toxin-antitoxin biofilm protein TabA K19334 tabA; biofilm protein TabA D APT61_15685 hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A D APT61_14150 bssS; transcriptional regulator K12148 bssS; biofilm regulator BssS D APT61_15460 bssR; transcriptional regulator K19688 bssR; biofilm regulator BssR D APT61_13890 multiple stress resistance protein BhsA K12151 bhsA; multiple stress resistance protein BhsA D APT61_06090 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA D APT61_18585 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D APT61_02405 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D APT61_03685 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D APT61_03625 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D APT61_06415 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D APT61_05490 antitoxin of toxin-antitoxin stability system K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins D APT61_04185 hypothetical protein K19168 cptA; toxin CptA D APT61_04180 hypothetical protein K09159 cptB; antitoxin CptB D APT61_05925 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:lax01504] D APT61_15425 multidrug transporter K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D APT61_17900 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D APT61_11020 methyl viologen resistance protein SmvA K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D APT61_19715 glutathione transferase K21264 fosA2; glutathione S-transferase fosA2 [EC:2.5.1.18] D APT61_13815 sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D APT61_13810 two-component system response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D APT61_17160 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D APT61_17165 multidrug transporter K18138 acrB; multidrug efflux pump D APT61_16810 multidrug RND transporter K18138 acrB; multidrug efflux pump D APT61_10165 transporter K18139 oprM; outer membrane protein, multidrug efflux system D APT61_17065 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D APT61_02330 transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D APT61_02325 efflux transporter periplasmic adaptor subunit K18141 acrE; membrane fusion protein, multidrug efflux system D APT61_02320 multidrug transporter K18142 acrF; multidrug efflux pump D APT61_03600 hypothetical protein K12340 tolC; outer membrane protein D APT61_10935 transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D APT61_11575 transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D APT61_07980 hypothetical protein K09476 ompF; outer membrane pore protein F D APT61_14870 hypothetical protein K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:lax00536] D APT61_00315 filamentous hemagglutinin K15125 fhaB; filamentous hemagglutinin D APT61_05300 filamentous hemagglutinin K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lax00537] D APT61_17580 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D APT61_01250 treF; alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:lax03200] D APT61_13620 phage tail protein K26967 Z; Enterobacteria phage tail completion protein D APT61_13610 phage tail protein K26969 V; Enterobacteria phage tail tube protein D APT61_13595 phage tail tape measure protein K26972 H; Enterobacteria phage tape measure protein C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:lax03100] D APT61_01165 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_06430 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_00740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_06435 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_18090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D APT61_00905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_04880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_04895 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_06580 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_16945 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_04885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_04890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D APT61_07905 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APT61_07955 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APT61_07915 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APT61_07940 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D APT61_00755 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APT61_18020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APT61_18075 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D APT61_08225 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D APT61_16315 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APT61_16300 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APT61_16305 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APT61_16320 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D APT61_00105 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APT61_02270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APT61_05685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APT61_21095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D APT61_08220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_04230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_21240 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_20375 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_20385 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_20380 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D APT61_00910 tRNA-His K14226 tRNA-His; tRNA His D APT61_00735 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APT61_01160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APT61_18095 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D APT61_19840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_16295 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_02790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_19210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_19215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_19220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_00915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_08230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D APT61_16015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_06395 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_16000 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_15985 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_15990 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D APT61_03430 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_16290 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_04485 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_04490 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_04495 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_16310 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_02800 tRNA-Met K14230 tRNA-Met; tRNA Met D APT61_03900 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APT61_20540 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D APT61_21295 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APT61_07080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APT61_00920 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D APT61_07965 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_04875 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_14275 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_14315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_14620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_14695 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D APT61_02285 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APT61_17905 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APT61_21235 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APT61_21250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D APT61_00760 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D APT61_21245 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APT61_09340 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APT61_09350 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D APT61_12740 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_12735 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_06410 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_06405 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_16005 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_06400 tRNA-Val K14237 tRNA-Val; tRNA Val D APT61_21785 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D APT61_21100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_18100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_03875 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_02265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_00730 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_00100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_01155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_05680 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D APT61_01170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_03880 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_02275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_05690 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_21090 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_00110 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_00745 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_18085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D APT61_02280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_01175 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_00115 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_02290 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_21085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_00750 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_03885 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_05695 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_18080 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D APT61_17225 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D APT61_02950 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D APT61_05530 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA D APT61_12930 rprA; antisense sRNA RprA K18518 rprA; small regulatory RNA RprA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D APT61_12775 histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D APT61_12800 histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] D APT61_03710 dkgA; 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D APT61_18070 dkgB; 2,5-diketo-D-gluconic acid reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D APT61_11505 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D APT61_16575 oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-] D APT61_06460 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D APT61_03775 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D APT61_15455 oxidoreductase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D APT61_17410 oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D APT61_03100 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D APT61_10755 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D APT61_14155 solA; N-methyltryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-] D APT61_20905 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D APT61_03665 NADPH quinone reductase MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D APT61_10150 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D APT61_11835 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D APT61_16510 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D APT61_20095 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D APT61_13275 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D APT61_06765 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D APT61_03815 glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D APT61_03015 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D APT61_02390 mononuclear molybdenum enzyme YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D APT61_10215 cytochrome B K12262 cybB; superoxide oxidase [EC:1.10.3.17] D APT61_07560 cytochrome B K12262 cybB; superoxide oxidase [EC:1.10.3.17] D APT61_05350 Mn-containing catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D APT61_11335 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D APT61_19710 arylesterase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D APT61_06180 bcp; thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D APT61_09765 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D APT61_16515 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D APT61_11215 osmotically inducible protein OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D APT61_19270 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D APT61_06300 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D APT61_01595 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D APT61_14305 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D APT61_15695 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D APT61_05875 nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D APT61_09000 acyl-CoA dehydrogenase K22027 iacA; indole-3-acetate monooxygenase [EC:1.14.13.235] D APT61_03165 FMN reductase K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9] D APT61_08325 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D APT61_18440 copper oxidase K14588 cueO; cuproxidase [EC:1.16.3.4] D APT61_00515 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D APT61_04820 NADH:flavorubredoxin oxidoreductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-] D APT61_20140 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D APT61_06165 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D APT61_19955 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D APT61_00650 [formate-C-acetyltransferase]-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APT61_15000 pflA; pyruvate formate lyase-activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APT61_15575 pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D APT61_15135 hybrid-cluster NAD(P)-dependent oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D APT61_04740 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D APT61_12720 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D APT61_11415 trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D APT61_10570 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D APT61_14205 opgC; glucans biosynthesis protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-] D APT61_01955 malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D APT61_10975 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D APT61_16350 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D APT61_02875 acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D APT61_21320 acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D APT61_21815 GCN5 family acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D APT61_02575 acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D APT61_11490 GCN5 family acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D APT61_10745 acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D APT61_15070 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D APT61_09725 glycosyl hydrolase family 65 K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D APT61_09690 sugar phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D APT61_01925 triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D APT61_05725 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D APT61_04425 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D APT61_21480 sugar kinase K18673 bglK; beta-glucoside kinase [EC:2.7.1.85] D APT61_07025 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D APT61_00225 sugar kinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D APT61_11510 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D APT61_12940 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D APT61_03540 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D APT61_13445 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D APT61_13480 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D APT61_01950 phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D APT61_12980 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D APT61_19290 phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D APT61_21065 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D APT61_14215 RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D APT61_16670 enterobactin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D APT61_10530 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D APT61_16050 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D APT61_01370 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D APT61_08690 serine/threonine protein phosphatase K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16] D APT61_15585 sugar-phosphatase K07757 ybiV; sugar-phosphatase [EC:3.1.3.23] D APT61_09510 S-adenosylmethionine tRNA ribosyltransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D APT61_06615 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D APT61_07145 phage resistance protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APT61_20850 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APT61_17185 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APT61_06440 hypothetical protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APT61_06120 c-di-GMP phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APT61_01190 biofilm formation regulator HmsP K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D APT61_18785 hypothetical protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D APT61_04010 deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D APT61_01100 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APT61_13950 DNAse K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APT61_19170 deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D APT61_16225 acyl-CoA esterase K01175 ybfF; esterase [EC:3.1.-.-] D APT61_17935 frsA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-] D APT61_03210 endoglucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D APT61_13675 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APT61_03335 glycoside hydrolase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D APT61_08505 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D APT61_21775 alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D APT61_03645 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180] D APT61_00205 alpha-glucosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199] D APT61_16075 alpha-mannosidase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-] D APT61_02220 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D APT61_13105 hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105] D APT61_16460 hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D APT61_04165 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D APT61_19915 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D APT61_11955 enamine deaminase RidA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D APT61_03535 hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D APT61_07710 GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D APT61_17275 thiamin pyrimidine pyrophosphate hydrolase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-] D APT61_06250 GDP-mannose pyrophosphatase K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-] D APT61_14015 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D APT61_00045 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D APT61_01935 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D APT61_01940 biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D APT61_00215 aldolase K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57] D APT61_15570 fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-] D APT61_00625 fructose-6-phosphate aldolase K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-] D APT61_20365 bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D APT61_04515 cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D APT61_00395 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D APT61_04835 arabinose-5-phosphate isomerase K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] D APT61_00210 sugar isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D APT61_20030 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D APT61_12560 rnfD; electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D APT61_12555 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D APT61_12550 electron transporter RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D APT61_17990 NADH:ubiquinone reductase (Na(+)-transporting) subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D APT61_17985 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D APT61_17980 NADH:ubiquinone reductase (Na(+)-transporting) subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D APT61_17975 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D APT61_17970 NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D APT61_17965 NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D APT61_01460 zntA; zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D APT61_19930 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D APT61_18365 transcriptional regulator K06206 sfsA; sugar fermentation stimulation protein A D APT61_15475 glucosamine--fructose-6-phosphate aminotransferase K19504 gfrE; glucoselysine-6-phosphate deglycase D APT61_15470 glucosamine--fructose-6-phosphate aminotransferase K19510 gfrF; fructoselysine-6-phosphate deglycase C 99982 Energy metabolism D APT61_00355 sufurtransferase FdhD K02379 fdhD; FdhD protein D APT61_05950 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D APT61_06980 2Fe-2S ferredoxin K11107 yfaE; ferredoxin D APT61_12565 electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D APT61_12570 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D APT61_12545 electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D APT61_05055 formate dehydrogenase K05796 hydN; electron transport protein HydN D APT61_00025 FMN-binding protein MioC K06205 mioC; MioC protein D APT61_04190 flavodoxin FldB K03840 fldB; flavodoxin II D APT61_05930 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins D APT61_20015 cytochrome b562 K15536 cybC; soluble cytochrome b562 D APT61_04990 formate hydrogenlyase K15827 hycB; formate hydrogenlyase subunit 2 D APT61_04995 formate hydrogenlyase subunit 3 K15828 hycC; formate hydrogenlyase subunit 3 D APT61_05000 hycD; hydrogenase 3 membrane subunit K15829 hycD; formate hydrogenlyase subunit 4 D APT61_05005 hycE; hydrogenase 3 large subunit K15830 hycE; formate hydrogenlyase subunit 5 D APT61_05010 formate hydrogenlyase complex iron-sulfur subunit K15831 hycF; formate hydrogenlyase subunit 6 D APT61_05015 formate hydrogenlyase K15832 hycG; formate hydrogenlyase subunit 7 D APT61_04825 nitric oxide reductase K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D APT61_16235 flavodoxin FldA K03839 fldA; flavodoxin I C 99983 Lipid metabolism D APT61_20295 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D APT61_05105 nrdI; ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D APT61_06355 sulfate transporter CysZ K06203 cysZ; CysZ protein D APT61_18170 lyase K08234 yaeR; glyoxylase I family protein D APT61_09775 murein peptide amidase A K14054 mpaA; murein peptide amidase A D APT61_03975 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein D APT61_02995 hypothetical protein K26607 cyuA; putative L-cysteine desulfidase C 99986 Glycan metabolism D APT61_07685 wcaD; putative colanic acid polymerase WcaD K13620 wcaD; putative colanic acid polymerase D APT61_07750 wcaM; colanic acid biosynthesis protein WcaM K16711 wcaM; colanic acid biosynthesis protein WcaM D APT61_09580 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D APT61_09585 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B D APT61_15790 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D APT61_03195 cellulose synthase K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D APT61_00935 protoheme IX biogenesis protein K02498 hemY; HemY protein D APT61_01080 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D APT61_01075 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D APT61_03550 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D APT61_02870 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D APT61_00120 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D APT61_12100 transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D APT61_03695 cell division protein FtsI K04753 sufI; suppressor of ftsI D APT61_22130 hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D APT61_15140 GntR family transcriptional regulator K15977 K15977; putative oxidoreductase D APT61_05885 hypothetical protein K15977 K15977; putative oxidoreductase D APT61_19700 LysR family transcriptional regulator K15977 K15977; putative oxidoreductase D APT61_03020 hypothetical protein K15977 K15977; putative oxidoreductase D APT61_06215 hydrolase K06999 K06999; phospholipase/carboxylesterase D APT61_05720 protein acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D APT61_02460 hypothetical protein K03623 yhcO; ribonuclease inhibitor D APT61_08770 cold-shock protein K03704 cspA; cold shock protein D APT61_13305 cold-shock protein K03704 cspA; cold shock protein D APT61_13310 cold-shock protein K03704 cspA; cold shock protein D APT61_05085 cold-shock protein K03704 cspA; cold shock protein D APT61_15095 cold shock domain protein CspD K03704 cspA; cold shock protein D APT61_21360 cold-shock protein K03704 cspA; cold shock protein D APT61_16470 cold-shock protein K03704 cspA; cold shock protein D APT61_21145 anti-sigma factor K07740 rsd; regulator of sigma D D APT61_13400 antA/AntB antirepressor family protein K07741 antB; anti-repressor protein D APT61_04985 hypothetical protein K15833 hycA; formate hydrogenlyase regulatory protein HycA D APT61_05020 formate hydrogenlyase maturation protein HycH K15834 hycH; formate hydrogenlyase maturation protein HycH D APT61_17250 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D APT61_01725 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D APT61_09975 heat-inducible protein K03668 hslJ; heat shock protein HslJ D APT61_15090 clpS; ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D APT61_17325 trigger factor K03545 tig; trigger factor D APT61_02385 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D APT61_00330 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D APT61_03480 urease accessory protein UreE K03187 ureE; urease accessory protein D APT61_03470 urease accessory protein UreF K03188 ureF; urease accessory protein D APT61_03465 urease accessory protein UreG K03189 ureG; urease accessory protein D APT61_03500 urease accessory protein UreD K03190 ureD; urease accessory protein D APT61_03475 urease accessory protein UreJ K03192 ureJ; urease accessory protein D APT61_05535 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D APT61_04970 hydrogenase assembly chaperone K04653 hypC; hydrogenase expression/formation protein HypC D APT61_04965 hydrogenase isoenzyme formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D APT61_04960 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D APT61_05065 carbamoyl phosphate phosphatase K04656 hypF; hydrogenase maturation protein HypF D APT61_05110 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH D APT61_00775 ATP-dependent protease K07391 comM; magnesium chelatase family protein D APT61_01900 hypothetical protein K07397 yhfA; putative redox protein D APT61_01690 Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D APT61_17860 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D APT61_10865 glutathione S-transferase K11208 yncG; GST-like protein C 99976 Replication and repair D APT61_17230 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D APT61_04540 endonuclease K01146 xni; protein Xni D APT61_05045 hypothetical protein K07454 K07454; putative restriction endonuclease D APT61_21685 hypothetical protein K03630 radC; DNA repair protein RadC D APT61_01065 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC D APT61_15115 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D APT61_02910 hypothetical protein K07460 yraN; putative endonuclease D APT61_02880 hypothetical protein K07461 K07461; putative endonuclease D APT61_02225 DNA processing protein DprA K04096 smf; DNA processing protein D APT61_07890 DNA gyrase inhibitor K07470 sbmC; DNA gyrase inhibitor D APT61_12360 terminase small subunit K07474 xtmA; phage terminase small subunit D APT61_15035 recombination factor protein RarA K07478 ycaJ; putative ATPase D APT61_12455 DNA replication protein DnaC K10762 ydaV; putative replication protein D APT61_13375 DNA primase K06919 K06919; putative DNA primase/helicase D APT61_18795 DNA-binding protein K07483 K07483; transposase D APT61_18790 transposase K07497 K07497; putative transposase D APT61_12515 integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D APT61_09670 phage shock protein A K03969 pspA; phage shock protein A D APT61_09685 phage shock protein D K03971 pspD; phage shock protein D D APT61_17125 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D APT61_06585 hypothetical protein K21990 yfdC; formate-nitrite transporter family protein D APT61_21780 transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APT61_00195 sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APT61_00200 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APT61_14665 Na+/xyloside symporter related transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APT61_18505 permease K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APT61_19880 symporter YagG K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APT61_21455 permease K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D APT61_00900 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family D APT61_12580 tppB; peptide ABC transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APT61_06040 amino acid transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D APT61_11525 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D APT61_19040 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D APT61_17505 branched-chain amino acid ABC transporter substrate-binding protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D APT61_10360 hypothetical protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D APT61_21030 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D APT61_09115 sulfonate ABC transporter substrate-binding protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D APT61_14355 nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family D APT61_22010 transporter K07085 K07085; putative transport protein D APT61_15355 transporter K07085 K07085; putative transport protein D APT61_07420 nickel/cobalt homeostasis protein RcnB K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D APT61_09455 septation protein A K06190 ispZ; intracellular septation protein D APT61_01430 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB D APT61_20185 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D APT61_13095 cell division modulator K15722 cedA; cell division activator D APT61_12530 beta-lactam resistance protein K22718 blr; divisome-associated membrane protein D APT61_21580 AmiB activator K22719 envC; murein hydrolase activator C 99993 Cell motility D APT61_13925 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D APT61_14760 competence protein K07343 tfoX; DNA transformation protein and related proteins D APT61_04565 secretion protein K15723 syd; SecY interacting protein Syd D APT61_13525 hypothetical protein K22720 glgS; surface composition regulator C 99995 Signaling proteins D APT61_18515 transcriptional regulator K03807 ampE; AmpE protein D APT61_08725 RNA chaperone ProQ K03607 proQ; ProP effector D APT61_01290 universal stress global response regulator UspA K06149 uspA; universal stress protein A D APT61_08390 universal stress protein UspC K14064 uspC; universal stress protein C D APT61_12115 universal stress protein UspE K14055 uspE; universal stress protein E D APT61_11695 universal stress protein UspG K11932 uspG; universal stress protein G D APT61_16505 universal stress protein UspG K11932 uspG; universal stress protein G D APT61_16590 carbon starvation protein A K06200 cstA; carbon starvation protein D APT61_00185 GTP-binding protein TypA K06207 typA; GTP-binding protein D APT61_14335 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D APT61_16335 nucleoside triphosphate hydrolase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D APT61_13430 serine protein kinase PrkA K07180 prkA; serine protein kinase D APT61_03530 hypothetical protein K07184 ygiM; SH3 domain protein D APT61_19130 hypothetical protein K07186 smp; membrane protein D APT61_11580 hypothetical protein K13630 marB; multiple antibiotic resistance protein MarB D APT61_17375 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein D APT61_07545 hypothetical protein K21638 iraM; anti-adapter protein IraM D APT61_19865 hypothetical protein K21638 iraM; anti-adapter protein IraM D APT61_13540 diguanylate phosphodiesterase K21973 bluF; blue light- and temperature-responsive anti-repressor D APT61_11235 diguanylate phosphodiesterase K21973 bluF; blue light- and temperature-responsive anti-repressor D APT61_07580 diguanylate phosphodiesterase K21973 bluF; blue light- and temperature-responsive anti-repressor D APT61_07575 two-component-system connector protein YcgZ K21974 ycgZ; probable RcsB/C two-component-system connector D APT61_10480 two-component-system connector protein YcgZ K21974 ycgZ; probable RcsB/C two-component-system connector D APT61_07570 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D APT61_10485 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D APT61_10490 two-component-system connector protein AriR K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance D APT61_07565 two-component-system connector protein AriR K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance C 99992 Structural proteins D APT61_15040 lolA; outer-membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D APT61_09180 lolB; lipoprotein localization factor LolB K02494 lolB; outer membrane lipoprotein LolB D APT61_06590 ABC transporter permease K04754 mlaA; phospholipid-binding lipoprotein MlaA D APT61_00855 lipopolysaccharide biosynthesis protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D APT61_12615 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D APT61_18215 molecular chaperone K06142 hlpA; outer membrane protein D APT61_04745 nlpD; lipoprotein NlpD K06194 nlpD; lipoprotein NlpD D APT61_04225 hypothetical protein K12943 ygeR; lipoprotein YgeR D APT61_02840 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D APT61_19465 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein D APT61_19460 capsular biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D APT61_09465 hypothetical protein K07275 ompW; outer membrane protein D APT61_11910 hypothetical protein K07280 K07280; outer membrane protein D APT61_13050 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D APT61_08855 hypothetical protein K07285 slp; outer membrane lipoprotein D APT61_17335 hypothetical protein K07286 yajG; uncharacterized lipoprotein D APT61_07645 outer membrane assembly protein AsmA K07289 asmA; AsmA protein D APT61_01215 hypothetical protein K07290 yhjG; AsmA family protein D APT61_17050 hypothetical protein K07340 ybbJ; inner membrane protein D APT61_12070 tqsA; pheromone autoinducer 2 transporter K11744 tqsA; AI-2 transport protein TqsA D APT61_09600 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D APT61_13135 transcriptional regulator K04064 osmE; osmotically inducible lipoprotein OsmE D APT61_06010 cytoskeletal protein RodZ K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D APT61_22155 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein D APT61_08355 ferritin K02255 ftnB; ferritin-like protein 2 D APT61_02040 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D APT61_14200 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D APT61_01315 tellurium resistance protein TerC K05794 terC; tellurite resistance protein TerC D APT61_20515 cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D APT61_08520 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D APT61_20685 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D APT61_18890 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D APT61_00960 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D APT61_12960 hemin transporter K07225 hmuS; putative hemin transport protein D APT61_09240 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D APT61_06710 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D APT61_21430 hypothetical protein K03796 bax; Bax protein D APT61_14795 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B D APT61_14115 virulence factor MviM K03810 mviM; virulence factor D APT61_06905 acyltransferase K02348 elaA; ElaA protein D APT61_05710 hypothetical protein K05811 yfiM; putative lipoprotein D APT61_09220 chaB; cation transport regulator K06197 chaB; cation transport regulator D APT61_10085 phenylacetic acid degradation protein PaaY K02617 paaY; phenylacetic acid degradation protein D APT61_19180 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D APT61_14265 hydrolase K04477 ycdX; putative hydrolase D APT61_05745 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor D APT61_09365 hypothetical protein K07001 K07001; NTE family protein D APT61_18315 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D APT61_12910 sufA; Fe-S cluster assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA D APT61_12905 FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D APT61_12895 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D APT61_13085 hypothetical protein K07038 K07038; inner membrane protein D APT61_16970 hypothetical protein K07038 K07038; inner membrane protein D APT61_01225 inner membrane protein YhjD K07058 K07058; membrane protein D APT61_00240 hypothetical protein K07058 K07058; membrane protein D APT61_20500 fxsA; suppressor FxsA K07113 fxsA; UPF0716 protein FxsA D APT61_04510 CsdA-binding activator K02426 sufE; cysteine desulfuration protein SufE D APT61_12885 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D APT61_14170 hypothetical protein K07146 K07146; UPF0176 protein D APT61_13800 lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D APT61_20640 hypothetical protein K04750 phnB; PhnB protein D APT61_20125 arsenic resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D APT61_14185 secY/secA suppressor protein K12147 msyB; acidic protein MsyB D APT61_19230 iron reductase K13255 fhuF; ferric iron reductase protein FhuF D APT61_04595 glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein D APT61_01515 hypothetical protein K03744 lemA; LemA protein D APT61_01990 lysis protein K03745 slyX; SlyX protein D APT61_02230 hypothetical protein K03747 smg; Smg protein D APT61_19080 hypothetical protein K05805 creA; CreA protein D APT61_04015 SprT family protein K02742 sprT; SprT protein D APT61_06705 cell division protein DedD K03749 dedD; DedD protein D APT61_01815 cell division protein DamX K03112 damX; DamX protein D APT61_07275 vancomycin high temperature exclusion protein K03748 sanA; SanA protein D APT61_06690 hypothetical protein K03975 dedA; membrane-associated protein D APT61_08715 hypothetical protein K03808 pqiA; paraquat-inducible protein A D APT61_14800 paraquat-inducible protein K03808 pqiA; paraquat-inducible protein A D APT61_06910 protein ElaB K05594 elaB; ElaB protein D APT61_22005 hypothetical protein K00389 yidH; putative membrane protein D APT61_03845 hypothetical protein K08984 yjdF; putative membrane protein D APT61_09755 hypothetical protein K08990 ycjF; putative membrane protein D APT61_01475 hypothetical protein K08993 yhhL; putative membrane protein D APT61_10285 hypothetical protein K08995 K08995; putative membrane protein D APT61_09360 hypothetical protein K09858 K09858; SEC-C motif domain protein D APT61_17235 hypothetical protein K09914 K09914; putative lipoprotein D APT61_08235 cupin K11312 K11312; cupin 2 domain-containing protein D APT61_20970 maltose operon protein MalM K05775 malM; maltose operon periplasmic protein D APT61_21000 phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE D APT61_17545 AroM protein K14591 aroM; protein AroM D APT61_20635 hypothetical protein K06193 phnA; protein PhnA C 99997 Function unknown D APT61_05145 hypothetical protein K06867 K06867; uncharacterized protein D APT61_21995 hypothetical protein K06871 K06871; uncharacterized protein D APT61_05365 stress-induced bacterial acidophilic repeat motif K06884 K06884; uncharacterized protein D APT61_10230 stress-induced bacterial acidophilic repeat motif K06884 K06884; uncharacterized protein D APT61_17745 hypothetical protein K06889 K06889; uncharacterized protein D APT61_20275 esterase K06889 K06889; uncharacterized protein D APT61_15795 hypothetical protein K06890 K06890; uncharacterized protein D APT61_03370 baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D APT61_03425 late control protein D K06905 D; Bacteriophage probable baseplate hub protein D APT61_03420 phage tail protein K06906 gpU; phage tail protein D APT61_03395 phage tail protein K06907 FI; Bacteriophage tail sheath protein D APT61_03400 phage tail protein K06908 FII; Bacteriophage tail tube protein D APT61_09750 hypothetical protein K06918 K06918; uncharacterized protein D APT61_14730 hypothetical protein K06929 K06929; uncharacterized protein D APT61_19485 flagellin N-methylase K06940 K06940; uncharacterized protein D APT61_07180 Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein D APT61_07990 hydrolase K06950 K06950; uncharacterized protein D APT61_13090 L-cystine transporter tcyP K06956 K06956; uncharacterized protein D APT61_04245 hypothetical protein K06975 K06975; uncharacterized protein D APT61_17455 glyoxalase K06996 K06996; uncharacterized protein D APT61_13910 hypothetical protein K07000 K07000; uncharacterized protein D APT61_03620 esterase YqiA K07000 K07000; uncharacterized protein D APT61_07085 hypothetical protein K07014 K07014; uncharacterized protein D APT61_01915 hydrolase K07019 K07019; uncharacterized protein D APT61_19005 hypothetical protein K07034 K07034; uncharacterized protein D APT61_08305 hypothetical protein K07039 K07039; uncharacterized protein D APT61_06205 hypothetical protein K07054 K07054; uncharacterized protein D APT61_01980 hypothetical protein K07070 K07070; uncharacterized protein D APT61_06755 epimerase K07071 K07071; uncharacterized protein D APT61_21015 nucleotidyltransferase K07074 K07074; uncharacterized protein D APT61_06640 hypothetical protein K07090 K07090; uncharacterized protein D APT61_16925 Tat pathway signal protein K07093 K07093; uncharacterized protein D APT61_06775 phosphodiesterase K07095 K07095; uncharacterized protein D APT61_20110 hypothetical protein K07109 K07109; uncharacterized protein D APT61_09480 hypothetical protein K07112 K07112; uncharacterized protein D APT61_11380 hypothetical protein K07112 K07112; uncharacterized protein D APT61_11385 YeeE/YedE family protein K07112 K07112; uncharacterized protein D APT61_02915 penicillin-binding protein K07121 K07121; uncharacterized protein D APT61_20770 hypothetical protein K07126 K07126; uncharacterized protein D APT61_08535 hypothetical protein K07136 K07136; uncharacterized protein D APT61_02555 radical SAM protein K07139 K07139; uncharacterized protein D APT61_14815 hypothetical protein K07140 K07140; MOSC domain-containing protein D APT61_07250 hypothetical protein K07148 K07148; uncharacterized protein D APT61_03905 hypothetical protein K07150 K07150; uncharacterized protein D APT61_03965 hypothetical protein K09131 K09131; uncharacterized protein D APT61_16435 hypothetical protein K09158 K09158; uncharacterized protein D APT61_08895 hypothetical protein K09160 K09160; uncharacterized protein D APT61_06800 hypothetical protein K09161 K09161; uncharacterized protein D APT61_14440 hypothetical protein K09702 K09702; uncharacterized protein D APT61_17560 hypothetical protein K09768 K09768; uncharacterized protein D APT61_09440 hypothetical protein K09780 K09780; uncharacterized protein D APT61_08010 hypothetical protein K09781 K09781; uncharacterized protein D APT61_13435 hypothetical protein K09786 K09786; uncharacterized protein D APT61_17140 hypothetical protein K09790 K09790; uncharacterized protein D APT61_14930 hypothetical protein K09791 K09791; uncharacterized protein D APT61_21585 hypothetical protein K09798 K09798; uncharacterized protein D APT61_05545 RnfH family protein K09801 K09801; uncharacterized protein D APT61_07900 hypothetical protein K09802 K09802; uncharacterized protein D APT61_08685 virulence factor VirK K09824 virK; uncharacterized protein D APT61_15110 hypothetical protein K09824 virK; uncharacterized protein D APT61_17960 hypothetical protein K05952 K05952; uncharacterized protein D APT61_14790 hypothetical protein K09857 K09857; uncharacterized protein D APT61_19045 hypothetical protein K09861 K09861; uncharacterized protein D APT61_18560 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D APT61_21125 hypothetical protein K09891 K09891; uncharacterized protein D APT61_00160 GTPase activator K09894 K09894; uncharacterized protein D APT61_04110 hypothetical protein K09895 K09895; uncharacterized protein D APT61_00130 hypothetical protein K09896 K09896; uncharacterized protein D APT61_00770 hypothetical protein K09897 K09897; uncharacterized protein D APT61_01910 hypothetical protein K09898 K09898; uncharacterized protein D APT61_06795 hypothetical protein K09899 K09899; uncharacterized protein D APT61_09425 dsDNA-mimic protein K09901 K09901; uncharacterized protein D APT61_08885 hypothetical protein K09902 K09902; uncharacterized protein D APT61_07090 hypothetical protein K09904 K09904; uncharacterized protein D APT61_08515 metalloprotein K09907 K09907; uncharacterized protein D APT61_02495 hypothetical protein K09908 K09908; uncharacterized protein D APT61_14735 hypothetical protein K09909 K09909; uncharacterized protein D APT61_18460 hypothetical protein K09910 K09910; uncharacterized protein D APT61_14775 macrodomain Ter protein K09911 K09911; uncharacterized protein D APT61_06565 hypothetical protein K09912 K09912; uncharacterized protein D APT61_14120 hypothetical protein K09915 K09915; uncharacterized protein D APT61_13270 hypothetical protein K09916 K09916; uncharacterized protein D APT61_08835 hypothetical protein K09917 K09917; uncharacterized protein D APT61_11975 DNA damage-inducible SOS regulon protein K09918 K09918; uncharacterized protein D APT61_03610 dehydrogenase K09920 K09920; uncharacterized protein D APT61_00975 hypothetical protein K09921 K09921; uncharacterized protein D APT61_03940 hypothetical protein K09923 K09923; uncharacterized protein D APT61_14935 hypothetical protein K09927 K09927; uncharacterized protein D APT61_06370 hypothetical protein K09954 K09954; uncharacterized protein D APT61_21460 hypothetical protein K09955 K09955; uncharacterized protein D APT61_17890 hypothetical protein K09958 K09958; uncharacterized protein D APT61_15395 hypothetical protein K09965 K09965; uncharacterized protein D APT61_11775 urea carboxylase K09967 K09967; uncharacterized protein D APT61_11780 urea carboxylase K09967 K09967; uncharacterized protein D APT61_17075 conjugal transfer protein TraB K09973 K09973; uncharacterized protein D APT61_13150 hypothetical protein K09975 K09975; uncharacterized protein D APT61_09110 hutD family protein K09975 K09975; uncharacterized protein D APT61_10000 hypothetical protein K09978 K09978; uncharacterized protein D APT61_02885 hypothetical protein K09979 K09979; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 4, 2024