+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Laccaria bicolor
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D LACBIDRAFT_185280 rRNA methyltransferase NOP1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D LACBIDRAFT_182923 hypothetical protein K14564 NOP56; nucleolar protein 56
D LACBIDRAFT_191218 hypothetical protein K14565 NOP58; nucleolar protein 58
D LACBIDRAFT_176816 small nucleolar ribonucleoprotein SNU13 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
C Box H/ACA snoRNPs
D LACBIDRAFT_186907 hypothetical protein K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D LACBIDRAFT_243973 hypothetical protein K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D LACBIDRAFT_245726 hypothetical protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D LACBIDRAFT_185754 hypothetical protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D LACBIDRAFT_320875 hypothetical protein K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
D LACBIDRAFT_247458 hypothetical protein K14764 SHQ1; protein SHQ1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D LACBIDRAFT_191260 hypothetical protein K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D LACBIDRAFT_311694 hypothetical protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D LACBIDRAFT_300687 hypothetical protein K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D LACBIDRAFT_324992 hypothetical protein K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D LACBIDRAFT_311268 hypothetical protein K14545 RRP7; ribosomal RNA-processing protein 7
D LACBIDRAFT_311426 hypothetical protein K14766 NOP14; nucleolar protein 14
D LACBIDRAFT_323023 hypothetical protein K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D LACBIDRAFT_301791 hypothetical protein K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D LACBIDRAFT_300921 hypothetical protein K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D LACBIDRAFT_296464 hypothetical protein K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D LACBIDRAFT_387147 hypothetical protein K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D LACBIDRAFT_318934 hypothetical protein K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D LACBIDRAFT_320789 hypothetical protein K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D LACBIDRAFT_311835 hypothetical protein K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D LACBIDRAFT_301133 hypothetical protein K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D LACBIDRAFT_304153 hypothetical protein K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D LACBIDRAFT_297788 hypothetical protein K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D LACBIDRAFT_256076 hypothetical protein K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D LACBIDRAFT_307361 hypothetical protein K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D LACBIDRAFT_300423 hypothetical protein K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D LACBIDRAFT_319868 hypothetical protein K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D LACBIDRAFT_246783 hypothetical protein K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D LACBIDRAFT_230477 hypothetical protein K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D LACBIDRAFT_248227 hypothetical protein K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D LACBIDRAFT_242726 hypothetical protein K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D LACBIDRAFT_324897 hypothetical protein K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D LACBIDRAFT_246981 hypothetical protein K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D LACBIDRAFT_319888 hypothetical protein K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D LACBIDRAFT_152287 hypothetical protein K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D LACBIDRAFT_243044 hypothetical protein K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D LACBIDRAFT_234758 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D LACBIDRAFT_325530 hypothetical protein K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D LACBIDRAFT_230870 hypothetical protein K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D LACBIDRAFT_311642 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D LACBIDRAFT_182886 hypothetical protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D LACBIDRAFT_245157 hypothetical protein K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D LACBIDRAFT_311389 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LACBIDRAFT_242884 hypothetical protein K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D LACBIDRAFT_300342 hypothetical protein K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D LACBIDRAFT_301878 hypothetical protein K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
D LACBIDRAFT_143120 hypothetical protein K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
D LACBIDRAFT_186329 hypothetical protein K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D LACBIDRAFT_291869 hypothetical protein K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
C Other 90S particles
D LACBIDRAFT_302798 hypothetical protein K14782 AATF; protein AATF/BFR2
D LACBIDRAFT_252281 hypothetical protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D LACBIDRAFT_298290 hypothetical protein K14786 KRI1; protein KRI1
D LACBIDRAFT_303740 90S preribosome/SSU processome component KRR1 K06961 KRR1; ribosomal RNA assembly protein
D LACBIDRAFT_180331 hypothetical protein K14787 MRD1; multiple RNA-binding domain-containing protein 1
D LACBIDRAFT_318965 hypothetical protein K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D LACBIDRAFT_385746 NUC153 and WD40 repeat-containing nucleolar rRNA processing-related protein K14788 NOL10; ribosome biogenesis protein ENP2
D LACBIDRAFT_301058 hypothetical protein K14789 NOP6; nucleolar protein 6
D LACBIDRAFT_303745 hypothetical protein K14790 NOP9; nucleolar protein 9
D LACBIDRAFT_313850 hypothetical protein K11135 PINX1; Pin2-interacting protein X1
D LACBIDRAFT_190410 hypothetical protein K14791 PWP1; periodic tryptophan protein 1
D LACBIDRAFT_306168 hypothetical protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D LACBIDRAFT_187086 hypothetical protein K14792 RRP5; rRNA biogenesis protein RRP5
D LACBIDRAFT_313827 rRNA processing protein RRP12 K14794 RRP12; ribosomal RNA-processing protein 12
D LACBIDRAFT_300621 hypothetical protein K14795 RRP36; ribosomal RNA-processing protein 36
D LACBIDRAFT_301693 glycosyltransferase family 32 protein K11806 DCAF13; DDB1- and CUL4-associated factor 13
D LACBIDRAFT_316979 glycosyltransferase family 32 protein K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D LACBIDRAFT_228340 hypothetical protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D LACBIDRAFT_167793 hypothetical protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D LACBIDRAFT_145649 hypothetical protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D LACBIDRAFT_227800 hypothetical protein K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D LACBIDRAFT_248976 hypothetical protein K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D LACBIDRAFT_244288 hypothetical protein K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D LACBIDRAFT_254044 hypothetical protein K14797 ENP1; essential nuclear protein 1
D LACBIDRAFT_301251 hypothetical protein K14798 LTV1; protein LTV1
D LACBIDRAFT_311593 hypothetical protein K11883 NOB1; RNA-binding protein NOB1
D LACBIDRAFT_229936 hypothetical protein K11884 PNO1; RNA-binding protein PNO1
D LACBIDRAFT_292340 hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran
D LACBIDRAFT_228884 hypothetical protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D LACBIDRAFT_178122 hypothetical protein K14800 TSR2; pre-rRNA-processing protein TSR2
D LACBIDRAFT_244871 hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D LACBIDRAFT_302768 hypothetical protein K14801 TSR4; pre-rRNA-processing protein TSR4
D LACBIDRAFT_315997 hypothetical protein K14290 XPO1; exportin-1
D LACBIDRAFT_190101 hypothetical protein K14293 KPNB1; importin subunit beta-1
D LACBIDRAFT_240538 hypothetical protein K18752 TNPO1; transportin-1
D LACBIDRAFT_305517 hypothetical protein K20221 IPO4; importin-4
D LACBIDRAFT_296576 hypothetical protein K20222 IPO5; importin-5
D LACBIDRAFT_183170 hypothetical protein K20223 IPO7; importin-7
D LACBIDRAFT_242896 hypothetical protein K20224 IPO9; importin-9
C Other pre-40S particles
D LACBIDRAFT_189016 aminophospholipid-transporting P-type ATPase K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D LACBIDRAFT_318032 hypothetical protein K03245 EIF3J; translation initiation factor 3 subunit J
D LACBIDRAFT_322816 hypothetical protein K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16]
D LACBIDRAFT_300761 hypothetical protein K14804 SLX9; ribosome biogenesis protein SLX9
B Pre-60S particles
C Helicases
D LACBIDRAFT_184803 hypothetical protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D LACBIDRAFT_242726 hypothetical protein K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D LACBIDRAFT_235491 hypothetical protein K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D LACBIDRAFT_290659 hypothetical protein K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D LACBIDRAFT_305106 hypothetical protein K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D LACBIDRAFT_249620 hypothetical protein K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D LACBIDRAFT_249916 hypothetical protein K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D LACBIDRAFT_231284 hypothetical protein K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D LACBIDRAFT_319316 hypothetical protein K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D LACBIDRAFT_181543 hypothetical protein K14811 DBP3; ATP-dependent RNA helicase DBP3 [EC:5.6.2.7]
D LACBIDRAFT_255896 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D LACBIDRAFT_302159 hypothetical protein K14538 NUG1; nuclear GTP-binding protein
D LACBIDRAFT_303781 hypothetical protein K14538 NUG1; nuclear GTP-binding protein
D LACBIDRAFT_309066 hypothetical protein K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D LACBIDRAFT_300740 hypothetical protein K14812 NGL2; RNA exonuclease NGL2 [EC:3.1.-.-]
D LACBIDRAFT_311877 hypothetical protein K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D LACBIDRAFT_247011 hypothetical protein K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D LACBIDRAFT_311236 hypothetical protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D LACBIDRAFT_303165 hypothetical protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D LACBIDRAFT_303224 hypothetical protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D RNase MRP
E LACBIDRAFT_230763 hypothetical protein K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E LACBIDRAFT_301127 hypothetical protein K14522 POP3; ribonuclease P/MRP protein subunit POP3 [EC:3.1.26.5]
E LACBIDRAFT_327347 hypothetical protein K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E LACBIDRAFT_315812 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E LACBIDRAFT_315765 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E LACBIDRAFT_305235 hypothetical protein K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Kinases
D LACBIDRAFT_228340 hypothetical protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D LACBIDRAFT_167793 hypothetical protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D LACBIDRAFT_145649 hypothetical protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
D LACBIDRAFT_317098 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D LACBIDRAFT_256579 hypothetical protein K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D LACBIDRAFT_297317 hypothetical protein K09506 DNAJA5; DnaJ homolog subfamily A member 5
D LACBIDRAFT_297224 hypothetical protein K03264 EIF6; translation initiation factor 6
D LACBIDRAFT_171471 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D LACBIDRAFT_291002 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D LACBIDRAFT_192317 hypothetical protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D LACBIDRAFT_308977 hypothetical protein K14815 MRT4; mRNA turnover protein 4
D LACBIDRAFT_191444 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D LACBIDRAFT_296945 hypothetical protein K14284 NXF; nuclear RNA export factor
D LACBIDRAFT_301207 hypothetical protein K14285 NXT1_2; NTF2-related export protein 1/2
D LACBIDRAFT_292340 hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran
D LACBIDRAFT_313569 hypothetical protein K14816 REI1; pre-60S factor REI1
D LACBIDRAFT_242892 hypothetical protein K14574 SDO1; ribosome maturation protein SDO1
D LACBIDRAFT_315997 hypothetical protein K14290 XPO1; exportin-1
D LACBIDRAFT_190101 hypothetical protein K14293 KPNB1; importin subunit beta-1
D LACBIDRAFT_240538 hypothetical protein K18752 TNPO1; transportin-1
D LACBIDRAFT_305517 hypothetical protein K20221 IPO4; importin-4
D LACBIDRAFT_296576 hypothetical protein K20222 IPO5; importin-5
D LACBIDRAFT_183170 hypothetical protein K20223 IPO7; importin-7
D LACBIDRAFT_242896 hypothetical protein K20224 IPO9; importin-9
D LACBIDRAFT_311623 hypothetical protein K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
D LACBIDRAFT_297771 hypothetical protein K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D LACBIDRAFT_300729 hypothetical protein K14827 IPI1; pre-rRNA-processing protein IPI1
D LACBIDRAFT_305466 hypothetical protein K14829 IPI3; pre-rRNA-processing protein IPI3
D LACBIDRAFT_300943 hypothetical protein K16912 LAS1; ribosomal biogenesis protein LAS1
C Ribosome quality control proteins
D LACBIDRAFT_304430 hypothetical protein K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D LACBIDRAFT_310912 hypothetical protein K24970 TCF25; transcription factor 25
D LACBIDRAFT_187856 hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase
D LACBIDRAFT_301719 hypothetical protein K14015 NPLOC4; nuclear protein localization protein 4
D LACBIDRAFT_302801 hypothetical protein K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D LACBIDRAFT_229254 ribosome biogenesis protein BRX1 K14820 BRX1; ribosome biogenesis protein BRX1
D LACBIDRAFT_174921 hypothetical protein K14821 BUD20; bud site selection protein 20
D LACBIDRAFT_300990 hypothetical protein K14822 CGR1; rRNA-processing protein CGR1
D LACBIDRAFT_292389 hypothetical protein K14823 EBP2; rRNA-processing protein EBP2
D LACBIDRAFT_173603 hypothetical protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8]
D LACBIDRAFT_316196 hypothetical protein K14832 MAK21; ribosome biogenesis protein MAK21
D LACBIDRAFT_188301 midasin nuclear AAA ATPase K14572 MDN1; midasin
D LACBIDRAFT_300987 ribosome biogenesis protein NIP7 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D LACBIDRAFT_249040 hypothetical protein K14833 NOC2; nucleolar complex protein 2
D LACBIDRAFT_305953 hypothetical protein K14834 NOC3; nucleolar complex protein 3
D LACBIDRAFT_229516 hypothetical protein K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D LACBIDRAFT_308620 hypothetical protein K14837 NOP12; nucleolar protein 12
D LACBIDRAFT_297290 hypothetical protein K14838 NOP15; nucleolar protein 15
D LACBIDRAFT_192580 hypothetical protein K14839 NOP16; nucleolar protein 16
D LACBIDRAFT_292782 hypothetical protein K14840 NOP53; nucleolar protein 53
D LACBIDRAFT_305942 hypothetical protein K14841 NSA1; ribosome biogenesis protein NSA1
D LACBIDRAFT_316454 ribosome biogenesis protein NSA2 K14842 NSA2; ribosome biogenesis protein NSA2
D LACBIDRAFT_243679 hypothetical protein K14843 PES1; pescadillo
D LACBIDRAFT_317976 hypothetical protein K14844 PUF6; pumilio homology domain family member 6
D LACBIDRAFT_190410 hypothetical protein K14791 PWP1; periodic tryptophan protein 1
D LACBIDRAFT_292824 hypothetical protein K14828 RIX1; pre-rRNA-processing protein RIX1
D LACBIDRAFT_306417 hypothetical protein K14571 RIX7; ribosome biogenesis ATPase
D LACBIDRAFT_305420 hypothetical protein K14846 RPF1; ribosome production factor 1
D LACBIDRAFT_303856 hypothetical protein K14847 RPF2; ribosome production factor 2
D LACBIDRAFT_243182 glutamate-rich WD repeat containing K14848 RRB1; ribosome assembly protein RRB1
D LACBIDRAFT_301120 rRNA processing protein RRP1 K14849 RRP1; ribosomal RNA-processing protein 1
D LACBIDRAFT_246167 rRNA processing protein RRP8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D LACBIDRAFT_313827 rRNA processing protein RRP12 K14794 RRP12; ribosomal RNA-processing protein 12
D LACBIDRAFT_296276 hypothetical protein K14851 RRP17; ribosomal RNA-processing protein 17
D LACBIDRAFT_323440 hypothetical protein K14852 RRS1; regulator of ribosome biosynthesis
D LACBIDRAFT_318347 hypothetical protein K14854 RSA3; ribosome assembly protein 3
D LACBIDRAFT_247709 protein required for actin cytoskeleton organization and cell cycle progression K14856 SDA1; protein SDA1
D LACBIDRAFT_316066 hypothetical protein K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D LACBIDRAFT_162683 hypothetical protein K14860 TMA16; translation machinery-associated protein 16
D LACBIDRAFT_297053 hypothetical protein K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D LACBIDRAFT_395637 microtubule binding protein YTM1 K14863 WDR12; ribosome biogenesis protein
D LACBIDRAFT_313928 hypothetical protein K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C LACBIDRAFT_297904 hypothetical protein K15262 BCP1; protein BCP1
C LACBIDRAFT_318058 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein
C LACBIDRAFT_184877 hypothetical protein K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C LACBIDRAFT_189592 hypothetical protein K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C LACBIDRAFT_228395 hypothetical protein K19307 BMT5; 25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]
C LACBIDRAFT_245637 hypothetical protein K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6]
C LACBIDRAFT_190518 hypothetical protein K26736 PA2G4; ERBB-3 binding protein
C LACBIDRAFT_327303 hypothetical protein K19828 MTG1; mitochondrial GTPase 1
C LACBIDRAFT_313997 hypothetical protein K15267 MTEF1; mitochondrial transcription factor 1
C LACBIDRAFT_189982 hypothetical protein K18803 HPM1; protein-histidine N-methyltransferase [EC:2.1.1.85]
C LACBIDRAFT_305970 hypothetical protein K27349 RKM2; ribosomal lysine N-methyltransferase 2 [EC:2.1.1.-]
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D LACBIDRAFT_182923 hypothetical protein K14564 NOP56; nucleolar protein 56
D LACBIDRAFT_303186 hypothetical protein K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D LACBIDRAFT_316579 60S ribosomal protein L8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D LACBIDRAFT_237670 60S ribosomal protein L8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D LACBIDRAFT_252413 60S ribosomal protein L8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D LACBIDRAFT_186907 hypothetical protein K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D LACBIDRAFT_185754 hypothetical protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
D LACBIDRAFT_248603 RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
B ribosomal protein modification factors
B rRNA processing factors
C LACBIDRAFT_311389 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
B Other maturation factors
C LACBIDRAFT_145463 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024