+E Transcription factors KO #

  Transcription Factors - Leptospira biflexa serovar Patoc Patoc 1 (Paris)

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D LEPBI_I2624 Putative transcriptional regulator, AraC-type K13652 K13652; AraC family transcriptional regulator D LEPBI_I0122 Hypothetical protein K13653 K13653; AraC family transcriptional regulator D LEPBI_II0134 ada; Bifunctional protein: transcriptional regulator of DNA repair/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D LEPBI_I3010 Putative bacterial regulatory protein, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D LEPBI_I1228 Putative transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator C DeoR family C LacI family C GntR family C TetR/AcrR family D LEPBI_I0295 Putative transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D LEPBI_I1104 Putative transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D LEPBI_I3106 Putative transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D LEPBI_I0100 Transcriptional regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon C Lrp/AsnC family C LuxR family C MarR family D LEPBI_I1518 Putative transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D LEPBI_I0068 HTH-type transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D LEPBI_I0798 Putative transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D LEPBI_I2741 cueR; Transcriptional activator/repressor,heavy-metal dependent, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C Fur family D LEPBI_I2330 Putative ferric uptake regulation protein, fur family (Ferric uptake regulator) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D LEPBI_I2849 Putative ferric uptake regulation protein, Fur family (Ferric uptake regulator) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D LEPBI_I2152 Putative ferric uptake regulation protein, fur family (Ferric uptake regulator) K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D LEPBI_I0825 Putative cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_I1149 Putative cAMP-dependent protein kinase K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_I1437 Putative cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_I1438 Putative cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_I0624 Putative cyclic-nucleotide binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_I0625 Putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_I2338 Putative cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_I2466 Putative cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_II0030 Putative cyclic nucleotide binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D LEPBI_I0871 Putative transcriptional regulator, Crp family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family C ArsR family D LEPBI_I1241 Putative transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D LEPBI_I2871 arsR1; Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D LEPBI_I1981 Putative transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator C XRE family D LEPBI_I1121 Putative transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family D LEPBI_I0370 Putative transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator C Other families D LEPBI_I3273 birA; BirA bifunctional protein; biotin operon repressor/Biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D LEPBI_I2702 Putative transcriptional regulator, NadR family K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D LEPBI_I2218 Putative transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D LEPBI_I2200 Conserved hypothetical protein with helix-turn-helix motif K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D LEPBI_I2259 Putative transcription regulator containing helix turn helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D LEPBI_II0071 Putative DNA-binding protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D LEPBI_I0566 Putative two-component sensor protein K02584 nifA; Nif-specific regulatory protein B Ribbon-helix-helix C CopG family D LEPBI_I2247 Putative helix-turn-helix protein CopG K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families D LEPBI_I2913 Conserved hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB B Other transcription factors C BglG family C Others D LEPBI_I2457 Putative thioredoxin-disulfide reductase; putative membrane protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D LEPBI_I1907 Putative BolA-like protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D LEPBI_I3473 parB; Chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LEPBI_II0026 Putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LEPBI_II0002 Putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LEPBI_p0002 Putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LEPBI_I2676 Transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D LEPBI_I3381 hcrA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D LEPBI_I0967 Putative transcriptional activator, TenA family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D LEPBI_I2786 Putative transcription elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase D LEPBI_I0365 Putative negative transcriptional regulator K07734 paiB; transcriptional regulator D LEPBI_I3376 Conserved hypothetical protein K07735 algH; putative transcriptional regulator D LEPBI_II0163 Putative DnaK suppressor; putative DksA/TraR zinc finger signature K06204 dksA; RNA polymerase-binding transcription factor ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0