+D GENES KO
#
KEGG Orthology (KO) - Lysobacter caseinilyticus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lcas00010]
D LYSCAS_22830 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LYSCAS_23910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LYSCAS_16910 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LYSCAS_12250 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LYSCAS_06120 putative fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LYSCAS_25060 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LYSCAS_17510 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LYSCAS_06170 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LYSCAS_14150 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LYSCAS_03750 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LYSCAS_06150 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LYSCAS_28300 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LYSCAS_14830 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LYSCAS_15790 phdB; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_14510 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LYSCAS_22410 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LYSCAS_11880 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LYSCAS_16980 hypothetical protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D LYSCAS_14020 hypothetical protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LYSCAS_18060 pckG; phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:lcas00020]
D LYSCAS_17290 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LYSCAS_04630 prpC; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D LYSCAS_28670 rpfA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LYSCAS_12620 icd_2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LYSCAS_02780 icd_1; isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D LYSCAS_30370 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LYSCAS_30380 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_07600 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LYSCAS_07610 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LYSCAS_24770 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LYSCAS_24780 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LYSCAS_24750 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LYSCAS_24760 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LYSCAS_24550 fumB; fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D LYSCAS_30320 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LYSCAS_04660 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LYSCAS_18060 pckG; phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D LYSCAS_14830 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LYSCAS_15790 phdB; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:lcas00030]
D LYSCAS_23910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LYSCAS_22800 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LYSCAS_22810 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D LYSCAS_09140 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LYSCAS_17440 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LYSCAS_17070 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D LYSCAS_17830 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D LYSCAS_14020 hypothetical protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LYSCAS_05210 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LYSCAS_22820 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D LYSCAS_22840 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LYSCAS_06120 putative fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LYSCAS_12250 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LYSCAS_16910 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:lcas00040]
D LYSCAS_30250 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LYSCAS_28020 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LYSCAS_09140 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:lcas00051]
D LYSCAS_08670 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LYSCAS_14020 hypothetical protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LYSCAS_07680 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LYSCAS_07690 wcaG; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LYSCAS_16910 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LYSCAS_12250 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LYSCAS_06120 putative fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LYSCAS_25060 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LYSCAS_18520 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D LYSCAS_14970 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:lcas00052]
D LYSCAS_06580 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LYSCAS_28020 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LYSCAS_14020 hypothetical protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LYSCAS_22830 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LYSCAS_16910 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LYSCAS_21180 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D LYSCAS_22900 aglA; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:lcas00053]
D LYSCAS_30250 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LYSCAS_11830 wbnF; nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:lcas00500]
D LYSCAS_21180 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D LYSCAS_22900 aglA; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D LYSCAS_28020 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LYSCAS_30560 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D LYSCAS_13580 ostA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D LYSCAS_13560 ostB; trehalose 6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D LYSCAS_14020 hypothetical protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LYSCAS_22830 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LYSCAS_23910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lcas00520]
D LYSCAS_02110 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LYSCAS_15980 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LYSCAS_24260 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D LYSCAS_15910 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LYSCAS_14080 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D LYSCAS_01370 gph; phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D LYSCAS_18730 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D LYSCAS_18720 glgC; mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D LYSCAS_18640 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LYSCAS_23750 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LYSCAS_25730 wbpA; UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D LYSCAS_22830 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LYSCAS_14020 hypothetical protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LYSCAS_28020 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LYSCAS_30250 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LYSCAS_06580 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LYSCAS_11830 wbnF; nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D LYSCAS_18520 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D LYSCAS_23910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LYSCAS_08670 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LYSCAS_07680 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LYSCAS_07690 wcaG; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:lcas00620]
D LYSCAS_11880 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LYSCAS_14830 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LYSCAS_15790 phdB; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_14510 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LYSCAS_22410 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LYSCAS_06150 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LYSCAS_21170 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LYSCAS_16490 bccP; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LYSCAS_16480 accC_2; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LYSCAS_24250 accD_2; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LYSCAS_05310 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D LYSCAS_16970 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D LYSCAS_02620 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D LYSCAS_14770 maeB; malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LYSCAS_04660 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LYSCAS_24550 fumB; fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D LYSCAS_30320 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LYSCAS_18060 pckG; phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D LYSCAS_28300 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LYSCAS_13790 mls; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lcas00630]
D LYSCAS_13800 aceA; isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D LYSCAS_11880 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LYSCAS_13790 mls; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D LYSCAS_04660 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LYSCAS_17290 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LYSCAS_04630 prpC; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D LYSCAS_28670 rpfA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_01460 phbB; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LYSCAS_01480 phbB-1; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LYSCAS_13500 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LYSCAS_08200 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LYSCAS_19080 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LYSCAS_17930 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_17940 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LYSCAS_22840 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LYSCAS_03810 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:lcas00640]
D LYSCAS_11880 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LYSCAS_09310 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LYSCAS_09320 pdhB_1; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LYSCAS_24720 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LYSCAS_09330 pdhB_2; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30420 quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LYSCAS_21170 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LYSCAS_16490 bccP; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LYSCAS_16480 accC_2; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LYSCAS_24250 accD_2; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LYSCAS_07610 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LYSCAS_07600 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LYSCAS_04630 prpC; citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D LYSCAS_04570 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D LYSCAS_04650 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:lcas00650]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_28060 fadB_2; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LYSCAS_23140 crt; enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D LYSCAS_24990 phbC; poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LYSCAS_24980 phaE; class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE
D LYSCAS_01460 phbB; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LYSCAS_01480 phbB-1; beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LYSCAS_24770 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LYSCAS_24780 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LYSCAS_24750 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LYSCAS_24760 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LYSCAS_21710 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LYSCAS_00900 mvaB; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LYSCAS_08660 lpsI; succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D LYSCAS_08650 lpsJ; succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D LYSCAS_24950 hbdH1; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D LYSCAS_24960 D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
C 00660 C5-Branched dibasic acid metabolism
D LYSCAS_07610 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LYSCAS_07600 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:lcas00562]
D LYSCAS_20640 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LYSCAS_18220 phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D LYSCAS_01190 hypothetical protein K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D LYSCAS_25060 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lcas00190]
D LYSCAS_25080 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D LYSCAS_25090 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D LYSCAS_25100 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D LYSCAS_25110 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D LYSCAS_25120 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D LYSCAS_25130 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D LYSCAS_25140 nuoG; NADH-quinone oxidoreductase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D LYSCAS_25150 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D LYSCAS_25160 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D LYSCAS_25170 nuoJ; NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D LYSCAS_25180 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D LYSCAS_25190 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D LYSCAS_25200 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D LYSCAS_25210 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D LYSCAS_10390 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D LYSCAS_24770 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LYSCAS_24780 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LYSCAS_24750 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LYSCAS_24760 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LYSCAS_19880 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LYSCAS_19890 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LYSCAS_19900 petC; cytochrome c K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LYSCAS_14320 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LYSCAS_14270 cox3; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D LYSCAS_14240 ctaD; cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D LYSCAS_14230 ctaC; cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D LYSCAS_14260 cox11; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LYSCAS_14310 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LYSCAS_27560 cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D LYSCAS_27570 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D LYSCAS_27580 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D LYSCAS_27590 ccoP1; Cbb3-type cytochrome c oxidase subunit K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D LYSCAS_10690 cydA-2; cytochrome bd oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LYSCAS_10700 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LYSCAS_15860 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LYSCAS_15880 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LYSCAS_15870 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LYSCAS_15850 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LYSCAS_15890 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LYSCAS_15820 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LYSCAS_15840 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LYSCAS_15830 atpE-1; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LYSCAS_16840 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D LYSCAS_02840 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LYSCAS_05300 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LYSCAS_29400 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lcas00710]
D LYSCAS_06170 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LYSCAS_17510 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LYSCAS_06120 putative fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LYSCAS_12250 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LYSCAS_17440 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LYSCAS_17070 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D LYSCAS_25060 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LYSCAS_09140 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LYSCAS_14770 maeB; malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LYSCAS_04660 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:lcas00720]
D LYSCAS_28300 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LYSCAS_04660 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LYSCAS_24550 fumB; fumarate hydratase class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D LYSCAS_30320 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LYSCAS_24770 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LYSCAS_24780 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LYSCAS_24750 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LYSCAS_24760 sdhD; succinate dehydrogenase membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LYSCAS_07600 sucD; succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LYSCAS_07610 sucC; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_12620 icd_2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LYSCAS_28670 rpfA; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LYSCAS_21170 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LYSCAS_16490 bccP; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LYSCAS_16480 accC_2; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LYSCAS_24250 accD_2; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LYSCAS_28220 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LYSCAS_17780 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D LYSCAS_11880 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:lcas00680]
D LYSCAS_14510 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LYSCAS_14520 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D LYSCAS_08200 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LYSCAS_03750 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LYSCAS_04660 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LYSCAS_06120 putative fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LYSCAS_12250 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LYSCAS_16910 pfkA; pyrophosphate--fructose 6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LYSCAS_11880 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LYSCAS_28300 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LYSCAS_14150 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LYSCAS_04480 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LYSCAS_27440 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:lcas00910]
D LYSCAS_07210 anaerobically induced outer membrane protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D LYSCAS_07270 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D LYSCAS_29360 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D LYSCAS_30170 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LYSCAS_13500 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LYSCAS_26330 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LYSCAS_29960 yadF; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LYSCAS_22510 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:lcas00920]
D LYSCAS_18760 nodQ; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D LYSCAS_18750 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LYSCAS_17570 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D LYSCAS_11020 formate dehydrogenase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D LYSCAS_11010 ferredoxin K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D LYSCAS_10990 DMSO reductase K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D LYSCAS_23190 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LYSCAS_06070 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LYSCAS_07240 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LYSCAS_11740 hypothetical protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LYSCAS_18230 metA; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LYSCAS_30830 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LYSCAS_18240 metB_2; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LYSCAS_19270 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lcas00061]
D LYSCAS_21170 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LYSCAS_16490 bccP; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LYSCAS_16480 accC_2; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LYSCAS_24250 accD_2; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LYSCAS_02320 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D LYSCAS_11560 acpC; acyl carrier protein K02078 acpP; acyl carrier protein
D LYSCAS_02340 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LYSCAS_01910 fabH_1; protein GumO K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LYSCAS_02350 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LYSCAS_11440 fabF_2; beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LYSCAS_02310 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LYSCAS_02330 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_11490 fabG_3; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_29940 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_21260 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LYSCAS_02640 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LYSCAS_28690 rpfB; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lcas00071]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_28050 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LYSCAS_28060 fadB_2; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LYSCAS_18040 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D LYSCAS_24680 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LYSCAS_28690 rpfB; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LYSCAS_14510 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D LYSCAS_02320 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D LYSCAS_11560 acpC; acyl carrier protein K02078 acpP; acyl carrier protein
D LYSCAS_02340 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lcas00561]
D LYSCAS_22410 zinc-binding dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LYSCAS_11990 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D LYSCAS_07520 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LYSCAS_05930 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LYSCAS_29810 hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D LYSCAS_19680 hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D LYSCAS_06410 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:lcas00564]
D LYSCAS_11240 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D LYSCAS_11990 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D LYSCAS_07520 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LYSCAS_05930 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D LYSCAS_03040 SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D LYSCAS_21310 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LYSCAS_08570 pssA_1; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LYSCAS_24970 pssA_2; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LYSCAS_24140 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D LYSCAS_25370 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LYSCAS_09020 hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D LYSCAS_12290 cls_1; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LYSCAS_24580 cls_3; cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LYSCAS_31240 clsB; cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D LYSCAS_30690 hypothetical protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D LYSCAS_19180 arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1]
D LYSCAS_22350 arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:lcas00592]
D LYSCAS_28050 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:lcas01040]
D LYSCAS_06450 desC; delta 9 acyl-lipid fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LYSCAS_11900 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LYSCAS_03090 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lcas00230]
D LYSCAS_05530 DNA mismatch repair protein MutT K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D LYSCAS_17560 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D LYSCAS_14020 hypothetical protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LYSCAS_05210 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LYSCAS_04440 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LYSCAS_16410 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D LYSCAS_18670 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LYSCAS_03140 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D LYSCAS_08370 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D LYSCAS_18680 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D LYSCAS_19980 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D LYSCAS_19970 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D LYSCAS_09160 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D LYSCAS_30330 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LYSCAS_16420 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LYSCAS_30140 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LYSCAS_03690 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LYSCAS_07550 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LYSCAS_02100 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D LYSCAS_28230 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LYSCAS_28080 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LYSCAS_17190 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D LYSCAS_12130 guaA_1; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LYSCAS_28240 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LYSCAS_17220 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D LYSCAS_09960 nrdJa; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LYSCAS_13860 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LYSCAS_13870 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LYSCAS_17240 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LYSCAS_02850 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D LYSCAS_06340 relA; ATP--GTP 3'-pyrophosphotransferase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D LYSCAS_03610 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LYSCAS_10950 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LYSCAS_21120 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LYSCAS_26050 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LYSCAS_26500 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LYSCAS_03500 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LYSCAS_10320 sugar kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D LYSCAS_14630 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D LYSCAS_20040 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D LYSCAS_16920 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LYSCAS_17580 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D LYSCAS_05830 apaH; bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D LYSCAS_18760 nodQ; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D LYSCAS_18750 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:lcas00240]
D LYSCAS_28820 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LYSCAS_28850 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LYSCAS_18460 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LYSCAS_01330 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D LYSCAS_23760 pyrD; dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D LYSCAS_14040 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D LYSCAS_08220 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D LYSCAS_21350 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D LYSCAS_28080 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LYSCAS_17580 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D LYSCAS_21030 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D LYSCAS_26180 metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D LYSCAS_03770 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D LYSCAS_27950 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D LYSCAS_30140 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LYSCAS_03690 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LYSCAS_20040 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D LYSCAS_24030 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D LYSCAS_09960 nrdJa; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LYSCAS_13860 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LYSCAS_13870 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LYSCAS_02270 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D LYSCAS_14010 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LYSCAS_11940 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D LYSCAS_05870 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LYSCAS_16650 putative NADH dehydrogenase/NAD(P)H nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lcas00250]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LYSCAS_05360 aspG; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LYSCAS_05950 ansA; isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LYSCAS_23430 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LYSCAS_23440 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LYSCAS_30710 hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D LYSCAS_14730 aspC; aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LYSCAS_28560 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LYSCAS_01250 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LYSCAS_01200 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LYSCAS_03500 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LYSCAS_30330 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LYSCAS_18460 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LYSCAS_21710 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LYSCAS_30170 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LYSCAS_14210 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LYSCAS_13500 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LYSCAS_28820 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LYSCAS_28850 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LYSCAS_15980 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LYSCAS_04440 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lcas00260]
D LYSCAS_19030 lysA; aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LYSCAS_24180 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LYSCAS_18250 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LYSCAS_16800 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D LYSCAS_15310 hypothetical protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D LYSCAS_08200 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LYSCAS_14150 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LYSCAS_04480 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LYSCAS_27440 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LYSCAS_04530 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LYSCAS_04520 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D LYSCAS_19080 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LYSCAS_17930 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_17940 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LYSCAS_08570 pssA_1; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LYSCAS_24970 pssA_2; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LYSCAS_08850 cysB; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D LYSCAS_08840 metB_1; cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D LYSCAS_18270 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LYSCAS_12220 ilvA; serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LYSCAS_24240 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LYSCAS_24220 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:lcas00270]
D LYSCAS_06070 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LYSCAS_07240 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LYSCAS_11740 hypothetical protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LYSCAS_08840 metB_1; cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D LYSCAS_08850 cysB; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D LYSCAS_30210 metH2; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LYSCAS_30200 metH1; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LYSCAS_17800 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LYSCAS_08990 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D LYSCAS_09840 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
D LYSCAS_13920 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D LYSCAS_07550 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LYSCAS_01390 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D LYSCAS_02090 putative S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D LYSCAS_30490 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D LYSCAS_00980 mtnB; methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D LYSCAS_01000 mtnC; enolase-phosphatase E1 K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D LYSCAS_00990 mtnD; acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D LYSCAS_16040 diguanylate cyclase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D LYSCAS_17790 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LYSCAS_19030 lysA; aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LYSCAS_24180 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LYSCAS_18250 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LYSCAS_16800 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D LYSCAS_18230 metA; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LYSCAS_30830 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LYSCAS_18240 metB_2; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LYSCAS_17750 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LYSCAS_14490 gsh1; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LYSCAS_06250 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LYSCAS_23190 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LYSCAS_04660 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LYSCAS_18270 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LYSCAS_04480 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LYSCAS_27440 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:lcas00280]
D LYSCAS_17750 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LYSCAS_00770 leu; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D LYSCAS_09310 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LYSCAS_09320 pdhB_1; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LYSCAS_24720 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LYSCAS_09330 pdhB_2; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_00780 acdA_1; acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LYSCAS_28050 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LYSCAS_00890 accC_1; 3-methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D LYSCAS_00820 accD_1; methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D LYSCAS_00880 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D LYSCAS_00900 mvaB; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LYSCAS_08660 lpsI; succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D LYSCAS_08650 lpsJ; succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lcas00290]
D LYSCAS_12220 ilvA; serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LYSCAS_17750 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LYSCAS_00770 leu; leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D LYSCAS_14730 aspC; aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00300 Lysine biosynthesis [PATH:lcas00300]
D LYSCAS_18250 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D LYSCAS_19030 lysA; aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LYSCAS_24180 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LYSCAS_23830 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LYSCAS_28860 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D LYSCAS_21430 hypothetical protein K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D LYSCAS_21450 dapE_2; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LYSCAS_11090 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LYSCAS_08000 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LYSCAS_07990 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lcas00310]
D LYSCAS_23770 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D LYSCAS_30380 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_24680 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_21710 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:lcas00220]
D LYSCAS_01260 argF'; N-acetylornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
D LYSCAS_01250 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LYSCAS_01200 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LYSCAS_09400 argI; arginase K01476 rocF; arginase [EC:3.5.3.1]
D LYSCAS_13500 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LYSCAS_28820 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LYSCAS_28850 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LYSCAS_30170 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LYSCAS_14730 aspC; aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LYSCAS_01230 argB; acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8]
D LYSCAS_01210 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D LYSCAS_01240 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:lcas00330]
D LYSCAS_29530 ldcC; arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D LYSCAS_29540 adi; arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D LYSCAS_13930 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D LYSCAS_27920 apolipoprotein acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D LYSCAS_29590 amino acid decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D LYSCAS_09840 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
D LYSCAS_13920 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D LYSCAS_08990 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D LYSCAS_04740 gatAX; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LYSCAS_28040 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D LYSCAS_09400 argI; arginase K01476 rocF; arginase [EC:3.5.3.1]
D LYSCAS_18400 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D LYSCAS_14210 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LYSCAS_05540 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LYSCAS_09760 pepL; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:lcas00340]
D LYSCAS_01090 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D LYSCAS_01020 hisI; histidine biosynthesis bifunctional protein HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D LYSCAS_01040 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D LYSCAS_01050 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D LYSCAS_01030 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D LYSCAS_01060 hisB; histidine biosynthesis bifunctional protein HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D LYSCAS_01070 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_27460 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_01080 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D LYSCAS_01110 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D LYSCAS_04280 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D LYSCAS_04360 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D LYSCAS_04350 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D LYSCAS_03810 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:lcas00350]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LYSCAS_01070 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_27460 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_09260 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LYSCAS_09250 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D LYSCAS_08900 uptB; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D LYSCAS_08910 uptA; fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D LYSCAS_14510 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LYSCAS_21710 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LYSCAS_17630 fumarylacetoacetase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:lcas00360]
D LYSCAS_12800 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LYSCAS_01070 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_27460 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_09260 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LYSCAS_03820 dadA; D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D LYSCAS_04740 gatAX; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LYSCAS_18840 bedB; benzene 1,2-dioxygenase ferredoxin K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:lcas00380]
D LYSCAS_09290 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D LYSCAS_30070 kmo; kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D LYSCAS_30060 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D LYSCAS_29980 nbaC; 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D LYSCAS_30050 amidohydrolase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D LYSCAS_29950 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D LYSCAS_29970 RutC family protein K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D LYSCAS_30380 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_24680 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_04740 gatAX; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lcas00400]
D LYSCAS_04760 dhs1; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LYSCAS_18350 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D LYSCAS_16500 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D LYSCAS_11640 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D LYSCAS_18360 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D LYSCAS_27470 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D LYSCAS_24170 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D LYSCAS_09130 trpE_2; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LYSCAS_09060 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LYSCAS_09050 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D LYSCAS_24210 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D LYSCAS_09030 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D LYSCAS_24240 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LYSCAS_24220 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LYSCAS_27450 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LYSCAS_01070 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_27460 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_12800 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LYSCAS_11580 rapK; pteridine-dependent deoxygenase like protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:lcas00410]
D LYSCAS_23900 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LYSCAS_23890 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:lcas00430]
D LYSCAS_20540 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LYSCAS_28560 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LYSCAS_30170 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lcas00450]
D LYSCAS_18240 metB_2; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D LYSCAS_30210 metH2; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LYSCAS_30200 metH1; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LYSCAS_08840 metB_1; cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D LYSCAS_18860 nifS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D LYSCAS_13000 pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LYSCAS_28570 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LYSCAS_18760 nodQ; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D LYSCAS_18750 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LYSCAS_24000 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lcas00460]
D LYSCAS_30560 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D LYSCAS_20540 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LYSCAS_05360 aspG; asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LYSCAS_05950 ansA; isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LYSCAS_08200 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lcas00470]
D LYSCAS_29830 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LYSCAS_07940 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LYSCAS_10880 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D LYSCAS_10850 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D LYSCAS_22640 tcbD; dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D LYSCAS_11090 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LYSCAS_19030 lysA; aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LYSCAS_03820 dadA; D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:lcas00480]
D LYSCAS_20540 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LYSCAS_14490 gsh1; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LYSCAS_06250 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LYSCAS_08440 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LYSCAS_10030 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LYSCAS_04620 gst_1; glutathione S-transferase GST-4.5 K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_05650 gst_2; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_06700 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_24700 gst_3; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_26000 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_31060 gst_4; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_12620 icd_2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LYSCAS_22800 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LYSCAS_24320 gpo; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D LYSCAS_30450 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D LYSCAS_29590 amino acid decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D LYSCAS_09840 speE1; polyamine aminopropyltransferase 1 K00797 speE; spermidine synthase [EC:2.5.1.16]
D LYSCAS_13920 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:lcas00540]
D LYSCAS_21250 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LYSCAS_07900 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LYSCAS_21270 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LYSCAS_04420 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LYSCAS_21240 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LYSCAS_25330 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LYSCAS_18620 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LYSCAS_03760 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LYSCAS_18610 haloacid dehalogenase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LYSCAS_25340 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LYSCAS_16730 kdtA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LYSCAS_10650 htrB_1; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LYSCAS_16720 htrB_2; lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LYSCAS_30860 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LYSCAS_02540 kdkA; 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D LYSCAS_08790 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LYSCAS_08770 hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D LYSCAS_08800 dehydrogenase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D LYSCAS_08780 hddC; D-glycero-D-manno-heptose 1-phosphate guanosyltransferase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lcas00541]
D LYSCAS_28020 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LYSCAS_06580 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LYSCAS_30250 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LYSCAS_11830 wbnF; nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D LYSCAS_19140 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LYSCAS_19130 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LYSCAS_19150 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LYSCAS_19160 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LYSCAS_08670 xanB; xanthan biosynthesis protein XanB K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LYSCAS_07680 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LYSCAS_07690 wcaG; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LYSCAS_15910 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LYSCAS_25730 wbpA; UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:lcas00550]
D LYSCAS_18640 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LYSCAS_23750 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LYSCAS_07950 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LYSCAS_19050 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D LYSCAS_19040 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D LYSCAS_08000 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LYSCAS_07940 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LYSCAS_07990 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LYSCAS_21320 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LYSCAS_13470 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LYSCAS_02910 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LYSCAS_07980 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LYSCAS_07960 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LYSCAS_18140 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D LYSCAS_17310 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LYSCAS_06310 ponB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D LYSCAS_30460 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LYSCAS_10280 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LYSCAS_08010 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LYSCAS_10240 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LYSCAS_03200 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:lcas00552]
D LYSCAS_13470 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LYSCAS_02910 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LYSCAS_06410 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lcas00730]
D LYSCAS_16810 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D LYSCAS_23790 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D LYSCAS_19240 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LYSCAS_17680 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D LYSCAS_17000 thiE; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D LYSCAS_08100 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D LYSCAS_14740 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LYSCAS_03920 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LYSCAS_16920 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:lcas00740]
D LYSCAS_08130 ribA; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LYSCAS_08160 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LYSCAS_10020 hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D LYSCAS_08120 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LYSCAS_08140 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D LYSCAS_23290 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D LYSCAS_06990 hypothetical protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D LYSCAS_05530 DNA mismatch repair protein MutT K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:lcas00750]
D LYSCAS_18370 pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D LYSCAS_27440 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LYSCAS_05800 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D LYSCAS_12310 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lcas00760]
D LYSCAS_19950 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D LYSCAS_30140 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D LYSCAS_03690 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LYSCAS_20970 hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D LYSCAS_17580 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D LYSCAS_16330 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D LYSCAS_07580 nadE; NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D LYSCAS_23680 competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D LYSCAS_30150 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LYSCAS_05440 NAD(P)(+) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LYSCAS_05490 putative NAD(P) transhydrogenase, alpha1 subunit PntAA K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LYSCAS_05430 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D LYSCAS_21710 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:lcas00770]
D LYSCAS_23880 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D LYSCAS_23890 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LYSCAS_09430 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D LYSCAS_14000 hypothetical protein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D LYSCAS_17580 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D LYSCAS_20510 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D LYSCAS_07850 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D LYSCAS_11790 hetI; 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D LYSCAS_17750 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LYSCAS_23900 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:lcas00780]
D LYSCAS_12760 bioC; malonyl-[acyl-carrier protein] O-methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D LYSCAS_11440 fabF_2; beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LYSCAS_02310 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LYSCAS_02330 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_11490 fabG_3; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_29940 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_21260 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LYSCAS_02640 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LYSCAS_12750 bioH_1; pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D LYSCAS_12730 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LYSCAS_17550 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LYSCAS_16060 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D LYSCAS_12720 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D LYSCAS_09440 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lcas00785]
D LYSCAS_10210 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D LYSCAS_10200 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_14830 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LYSCAS_15790 phdB; acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LYSCAS_30370 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LYSCAS_30380 sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LYSCAS_09310 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LYSCAS_09320 pdhB_1; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LYSCAS_24720 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LYSCAS_09330 pdhB_2; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LYSCAS_19080 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D LYSCAS_17930 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LYSCAS_17940 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:lcas00790]
D LYSCAS_12990 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D LYSCAS_01350 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D LYSCAS_03920 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LYSCAS_26340 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D LYSCAS_14370 folB; 7,8-dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D LYSCAS_02760 hypothetical protein K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D LYSCAS_14380 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D LYSCAS_23870 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D LYSCAS_03590 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D LYSCAS_05840 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LYSCAS_04460 folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D LYSCAS_08130 ribA; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LYSCAS_02300 trpE_1; hypothetical protein K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D LYSCAS_02290 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D LYSCAS_16220 ptps; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LYSCAS_27810 phhB; putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LYSCAS_12800 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LYSCAS_14390 ptr1; pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D LYSCAS_07320 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LYSCAS_07310 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LYSCAS_12650 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LYSCAS_02520 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D LYSCAS_02510 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D LYSCAS_02490 moaE; molybdopterin-converting factor chain 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D LYSCAS_05280 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D LYSCAS_28160 moeA; molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D LYSCAS_28150 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:lcas00670]
D LYSCAS_05840 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LYSCAS_28220 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LYSCAS_08200 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LYSCAS_18670 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LYSCAS_16420 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LYSCAS_10580 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LYSCAS_17930 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LYSCAS_30210 metH2; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LYSCAS_30200 metH1; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LYSCAS_05870 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LYSCAS_17780 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D LYSCAS_17090 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lcas00860]
D LYSCAS_04410 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LYSCAS_05250 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D LYSCAS_16990 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LYSCAS_11620 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LYSCAS_10980 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D LYSCAS_11290 hemD; uroporphyrinogen III methyltransferase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D LYSCAS_18330 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D LYSCAS_11320 hemF; oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D LYSCAS_07290 coproporphyrinogen-III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D LYSCAS_03940 membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D LYSCAS_12070 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D LYSCAS_11300 uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D LYSCAS_14320 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LYSCAS_14310 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LYSCAS_05750 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D LYSCAS_16260 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lcas00130]
D LYSCAS_11580 rapK; pteridine-dependent deoxygenase like protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D LYSCAS_12700 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LYSCAS_01380 ubiG; ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D LYSCAS_05730 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D LYSCAS_11190 ubiE; ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D LYSCAS_05720 visC; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D LYSCAS_08980 coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D LYSCAS_13420 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D LYSCAS_05340 NAD(P)H dehydrogenase (quinone) K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LYSCAS_09260 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lcas00900]
D LYSCAS_19240 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D LYSCAS_21300 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D LYSCAS_03730 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D LYSCAS_05220 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D LYSCAS_03720 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D LYSCAS_01960 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D LYSCAS_23320 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_21130 ispA; farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LYSCAS_19070 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LYSCAS_21320 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:lcas00907]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LYSCAS_16960 short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase
D LYSCAS_00900 mvaB; hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LYSCAS_28050 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D LYSCAS_17440 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:lcas00523]
D LYSCAS_19140 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LYSCAS_19130 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LYSCAS_19150 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LYSCAS_19160 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D LYSCAS_19130 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:lcas00946]
D LYSCAS_30560 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D LYSCAS_21460 acyII; penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:lcas00261]
D LYSCAS_18760 nodQ; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D LYSCAS_18750 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D LYSCAS_19030 lysA; aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LYSCAS_24180 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LYSCAS_23830 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LYSCAS_28860 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lcas00521]
D LYSCAS_22830 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D LYSCAS_14020 hypothetical protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LYSCAS_20640 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LYSCAS_19140 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LYSCAS_19130 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LYSCAS_19150 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LYSCAS_19160 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D LYSCAS_22830 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:lcas00525]
D LYSCAS_19140 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LYSCAS_19130 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:lcas00401]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LYSCAS_01070 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_27460 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D LYSCAS_09130 trpE_2; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LYSCAS_09060 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D LYSCAS_02340 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LYSCAS_02330 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_11490 fabG_3; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_29940 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_02640 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D LYSCAS_02320 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D LYSCAS_11560 acpC; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:lcas00999]
D LYSCAS_17800 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LYSCAS_11640 aroE; shikimate dehydrogenase (NADP(+)) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D LYSCAS_30560 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lcas00362]
D LYSCAS_28050 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LYSCAS_29950 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D LYSCAS_04330 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LYSCAS_28060 fadB_2; 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LYSCAS_24680 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:lcas00627]
D LYSCAS_04740 gatAX; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LYSCAS_05310 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation [PATH:lcas00364]
D LYSCAS_24060 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:lcas00625]
D LYSCAS_14510 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:lcas00361]
D LYSCAS_24060 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:lcas00623]
D LYSCAS_24060 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D LYSCAS_29950 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D LYSCAS_28050 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:lcas00643]
D LYSCAS_09250 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D LYSCAS_08900 uptB; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D LYSCAS_08910 uptA; fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D LYSCAS_04740 gatAX; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:lcas00930]
D LYSCAS_02240 fadB_1; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D LYSCAS_00700 hypothetical protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
D LYSCAS_29720 2,4'-dihydroxyacetophenone dioxygenase K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:lcas00626]
D LYSCAS_14510 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D LYSCAS_04330 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lcas03020]
D LYSCAS_05100 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LYSCAS_05090 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LYSCAS_04790 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LYSCAS_17230 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lcas03010]
D LYSCAS_27960 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LYSCAS_21400 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LYSCAS_04970 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LYSCAS_04800 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LYSCAS_04860 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LYSCAS_29880 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LYSCAS_05070 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LYSCAS_04890 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LYSCAS_08920 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LYSCAS_05040 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LYSCAS_04810 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LYSCAS_05080 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LYSCAS_04820 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LYSCAS_04900 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LYSCAS_24860 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LYSCAS_23610 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LYSCAS_04940 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LYSCAS_29870 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LYSCAS_04990 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LYSCAS_23270 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LYSCAS_14350 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LYSCAS_05130 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LYSCAS_05000 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LYSCAS_05030 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LYSCAS_05020 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LYSCAS_04910 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LYSCAS_04880 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LYSCAS_05110 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LYSCAS_29860 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LYSCAS_05120 hypothetical protein K02864 RP-L10; large subunit ribosomal protein L10
D LYSCAS_05140 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LYSCAS_08930 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LYSCAS_04930 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LYSCAS_04840 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LYSCAS_04960 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LYSCAS_04780 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LYSCAS_04870 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LYSCAS_23640 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LYSCAS_20160 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LYSCAS_23240 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LYSCAS_04980 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LYSCAS_05010 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LYSCAS_04920 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LYSCAS_05200 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D LYSCAS_23250 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LYSCAS_11860 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LYSCAS_04950 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LYSCAS_04850 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LYSCAS_17280 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D LYSCAS_02360 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LYSCAS_11870 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LYSCAS_12420 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D LYSCAS_20150 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LYSCAS_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LYSCAS_r00040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LYSCAS_r00050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LYSCAS_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LYSCAS_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LYSCAS_r00060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lcas00970]
D LYSCAS_t00250 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LYSCAS_t00280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LYSCAS_t00520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LYSCAS_t00020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LYSCAS_t00400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LYSCAS_t00230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LYSCAS_t00100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LYSCAS_t00410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LYSCAS_t00320 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LYSCAS_t00050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LYSCAS_t00470 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LYSCAS_t00190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LYSCAS_t00170 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LYSCAS_t00510 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LYSCAS_t00420 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LYSCAS_t00460 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LYSCAS_t00300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LYSCAS_t00150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LYSCAS_t00090 tRNA-His K14226 tRNA-His; tRNA His
D LYSCAS_t00260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LYSCAS_t00290 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LYSCAS_t00360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00440 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00480 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00070 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00180 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LYSCAS_t00080 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LYSCAS_t00450 tRNA-Met K14230 tRNA-Met; tRNA Met
D LYSCAS_t00210 tRNA-Met K14230 tRNA-Met; tRNA Met
D LYSCAS_t00270 tRNA-Met K14230 tRNA-Met; tRNA Met
D LYSCAS_t00350 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LYSCAS_t00010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LYSCAS_t00110 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LYSCAS_t00340 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LYSCAS_t00040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LYSCAS_t00390 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LYSCAS_t00030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LYSCAS_t00500 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LYSCAS_t00140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LYSCAS_t00200 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LYSCAS_t00380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LYSCAS_t00130 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LYSCAS_t00160 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LYSCAS_t00060 tRNA-Val K14237 tRNA-Val; tRNA Val
D LYSCAS_t00490 tRNA-Val K14237 tRNA-Val; tRNA Val
D LYSCAS_t00330 tRNA-Val K14237 tRNA-Val; tRNA Val
D LYSCAS_04410 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LYSCAS_05670 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LYSCAS_23720 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LYSCAS_07470 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LYSCAS_29900 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LYSCAS_12140 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LYSCAS_12150 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LYSCAS_20130 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LYSCAS_27490 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LYSCAS_01280 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LYSCAS_24000 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LYSCAS_10580 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LYSCAS_08460 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LYSCAS_20940 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LYSCAS_23300 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LYSCAS_28740 lysS_1; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LYSCAS_13970 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LYSCAS_08540 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LYSCAS_01120 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LYSCAS_20170 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LYSCAS_20180 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LYSCAS_14100 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LYSCAS_09370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lcas03060]
D LYSCAS_04830 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LYSCAS_05160 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D LYSCAS_25070 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D LYSCAS_20620 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LYSCAS_20630 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LYSCAS_20610 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LYSCAS_12440 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LYSCAS_07870 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LYSCAS_11250 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LYSCAS_23600 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LYSCAS_20490 hypothetical protein K03110 ftsY; fused signal recognition particle receptor
D LYSCAS_12090 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D LYSCAS_12100 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D LYSCAS_12110 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D LYSCAS_02190 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LYSCAS_23310 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lcas04122]
D LYSCAS_23190 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D LYSCAS_28650 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LYSCAS_02490 moaE; molybdopterin-converting factor chain 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D LYSCAS_02520 moaA; GTP 3',8-cyclase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D LYSCAS_02500 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D LYSCAS_02510 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D LYSCAS_05280 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D LYSCAS_17690 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:lcas03018]
D LYSCAS_16240 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LYSCAS_27790 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D LYSCAS_13210 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D LYSCAS_03750 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LYSCAS_24870 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LYSCAS_31490 rhlE; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LYSCAS_22960 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LYSCAS_04180 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LYSCAS_06370 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LYSCAS_13230 hypothetical protein K03628 rho; transcription termination factor Rho
D LYSCAS_28900 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LYSCAS_16560 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LYSCAS_03540 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D LYSCAS_02840 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LYSCAS_05300 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LYSCAS_29400 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LYSCAS_23860 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lcas03030]
D LYSCAS_02590 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LYSCAS_21200 dnaE1; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LYSCAS_02480 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LYSCAS_02260 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LYSCAS_20960 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LYSCAS_08450 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LYSCAS_12400 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LYSCAS_21550 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LYSCAS_29850 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LYSCAS_14330 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LYSCAS_19120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LYSCAS_02600 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LYSCAS_21230 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LYSCAS_11340 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LYSCAS_30520 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lcas03410]
D LYSCAS_23120 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LYSCAS_13170 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LYSCAS_20470 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LYSCAS_15330 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D LYSCAS_11910 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LYSCAS_15740 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D LYSCAS_03230 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LYSCAS_20280 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LYSCAS_11750 xthA1; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LYSCAS_14050 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LYSCAS_31520 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LYSCAS_11340 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LYSCAS_28790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LYSCAS_30520 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lcas03420]
D LYSCAS_02980 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LYSCAS_03480 uvrA2; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D LYSCAS_23230 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D LYSCAS_20110 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D LYSCAS_25360 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D LYSCAS_11370 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LYSCAS_11340 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LYSCAS_30520 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lcas03430]
D LYSCAS_23660 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LYSCAS_23960 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D LYSCAS_11370 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LYSCAS_30080 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D LYSCAS_01970 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LYSCAS_21140 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LYSCAS_28790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LYSCAS_19120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LYSCAS_21200 dnaE1; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LYSCAS_12400 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LYSCAS_02480 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LYSCAS_20960 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LYSCAS_02260 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LYSCAS_02590 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LYSCAS_08450 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LYSCAS_30520 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lcas03440]
D LYSCAS_28790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LYSCAS_19120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LYSCAS_12390 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D LYSCAS_02150 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LYSCAS_02460 recR; recombination protein RecR K06187 recR; recombination protein RecR
D LYSCAS_23700 recA; protein RecA K03553 recA; recombination protein RecA
D LYSCAS_11340 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LYSCAS_07420 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LYSCAS_07400 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LYSCAS_07430 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LYSCAS_17260 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LYSCAS_12950 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D LYSCAS_12940 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D LYSCAS_12960 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LYSCAS_21200 dnaE1; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LYSCAS_12400 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LYSCAS_02480 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LYSCAS_20960 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LYSCAS_02260 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LYSCAS_02590 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LYSCAS_08450 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LYSCAS_10400 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:lcas03450]
D LYSCAS_16100 ku; non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku
D LYSCAS_25690 lig3; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lcas02010]
D LYSCAS_17470 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D LYSCAS_17460 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D LYSCAS_17450 modC; molybdate-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D LYSCAS_30550 ugpC; sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LYSCAS_12900 yrbC; organic solvent ABC transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D LYSCAS_08490 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LYSCAS_12910 yrbD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LYSCAS_08510 yrbE_1; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LYSCAS_12920 yrbE_2; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LYSCAS_12890 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D LYSCAS_08500 yrbF_1; ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LYSCAS_12930 yrbF_2; ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LYSCAS_23100 phoX; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LYSCAS_23090 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D LYSCAS_23080 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D LYSCAS_23070 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LYSCAS_08830 transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D LYSCAS_08820 wzt; ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D LYSCAS_12470 natB; sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D LYSCAS_12480 natA; sodium ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D LYSCAS_20920 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D LYSCAS_20930 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D LYSCAS_25270 lolC; cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein
D LYSCAS_25280 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LYSCAS_30770 hypothetical protein K02196 ccmD; heme exporter protein D
D LYSCAS_30760 cycZ; heme ABC transporter permease K02195 ccmC; heme exporter protein C
D LYSCAS_30750 cycW; heme exporter protein B K02194 ccmB; heme exporter protein B
D LYSCAS_30740 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D LYSCAS_08430 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D LYSCAS_08420 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D LYSCAS_18580 yhbG; ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LYSCAS_13190 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D LYSCAS_13200 ftsE; ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D LYSCAS_25320 msbA_2; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LYSCAS_15610 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
C 02060 Phosphotransferase system (PTS) [PATH:lcas02060]
D LYSCAS_18500 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LYSCAS_18510 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D LYSCAS_18520 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D LYSCAS_18550 ptsN; PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:lcas03070]
D LYSCAS_16740 tolC; membrane protein K12340 tolC; outer membrane protein
D LYSCAS_08250 xpsD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D LYSCAS_08340 xpsF; type II secretion system protein F K02455 gspF; general secretion pathway protein F
D LYSCAS_00240 hypothetical protein K02456 gspG; general secretion pathway protein G
D LYSCAS_08330 xpsG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D LYSCAS_08320 hypothetical protein K02457 gspH; general secretion pathway protein H
D LYSCAS_08310 hypothetical protein K02458 gspI; general secretion pathway protein I
D LYSCAS_08300 xpsJ; type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D LYSCAS_08290 pefK; type II secretion system protein K K02460 gspK; general secretion pathway protein K
D LYSCAS_08280 pefL; type II secretion system protein L K02461 gspL; general secretion pathway protein L
D LYSCAS_08270 xpsM; protein XpsM K02462 gspM; general secretion pathway protein M
D LYSCAS_08350 xpsE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LYSCAS_20620 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LYSCAS_20630 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LYSCAS_05160 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D LYSCAS_25070 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D LYSCAS_04830 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LYSCAS_20610 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LYSCAS_12440 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LYSCAS_07870 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LYSCAS_20490 hypothetical protein K03110 ftsY; fused signal recognition particle receptor
D LYSCAS_11250 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LYSCAS_23600 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LYSCAS_12090 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D LYSCAS_12100 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D LYSCAS_12110 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D LYSCAS_20860 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lcas02020]
D LYSCAS_02830 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LYSCAS_02820 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D LYSCAS_03920 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LYSCAS_26340 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D LYSCAS_23100 phoX; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LYSCAS_08740 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09470 phoQ; two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09480 phoP; DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D LYSCAS_06990 hypothetical protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D LYSCAS_02210 mucD; peptidase S1 K04771 degP; serine protease Do [EC:3.4.21.107]
D LYSCAS_09970 htrA; heat-shock protein K04771 degP; serine protease Do [EC:3.4.21.107]
D LYSCAS_02930 creC; two-component sensor histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D LYSCAS_02940 creB; DNA-binding response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D LYSCAS_29030 copper-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D LYSCAS_29050 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D LYSCAS_29040 cation transporter K07787 cusA; copper/silver efflux system protein
D LYSCAS_15080 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LYSCAS_15090 kdpE_1; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LYSCAS_22700 kdpE_2; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LYSCAS_14310 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LYSCAS_12410 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LYSCAS_01550 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LYSCAS_03200 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LYSCAS_10970 algZ; histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D LYSCAS_12480 natA; sodium ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D LYSCAS_12470 natB; sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D LYSCAS_01530 hypothetical protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D LYSCAS_01520 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D LYSCAS_27780 gacA; DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LYSCAS_23730 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D LYSCAS_19100 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D LYSCAS_17960 bla; serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D LYSCAS_10050 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LYSCAS_10040 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D LYSCAS_25640 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LYSCAS_25670 pru; protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LYSCAS_25630 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LYSCAS_25660 hypothetical protein K07346 fimC; fimbrial chaperone protein
D LYSCAS_20880 outer membrane usher protein K07347 fimD; outer membrane usher protein
D LYSCAS_25650 hypothetical protein K07347 fimD; outer membrane usher protein
D LYSCAS_21420 glnD; bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D LYSCAS_13910 glnB; nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D LYSCAS_29270 hypothetical protein K04751 glnB; nitrogen regulatory protein P-II 1
D LYSCAS_13140 ntrB; two-component system sensor protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D LYSCAS_13130 ntrC_1; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D LYSCAS_13500 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_07620 pilS; two-component sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D LYSCAS_07630 pilR; sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D LYSCAS_18570 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D LYSCAS_07640 pilE_1; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_07650 pilE_2; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_22210 pilE_3; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_06210 pilJ; pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ
D LYSCAS_06220 pilI; pilus biogenesis protein K02659 pilI; twitching motility protein PilI
D LYSCAS_06200 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D LYSCAS_06240 pilG; response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D LYSCAS_01940 pilH_1; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_06230 pilH_2; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_30430 pilH_3; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_06190 hypothetical protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D LYSCAS_06180 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D LYSCAS_28710 rpfC; sensory/regulatory protein RpfC K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D LYSCAS_28720 rpfG; two-component system response regulator K13815 rpfG; two-component system, response regulator RpfG
D LYSCAS_09000 clp; CRP-like protein Clp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LYSCAS_28700 rpfF; enoyl-CoA hydratase K13816 rpfF; DSF synthase
D LYSCAS_19880 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LYSCAS_19890 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LYSCAS_19900 petC; cytochrome c K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LYSCAS_27560 cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D LYSCAS_27570 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D LYSCAS_27580 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D LYSCAS_27590 ccoP1; Cbb3-type cytochrome c oxidase subunit K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D LYSCAS_10690 cydA-2; cytochrome bd oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LYSCAS_10700 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LYSCAS_16740 tolC; membrane protein K12340 tolC; outer membrane protein
D LYSCAS_23510 capsular polysaccharide biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D LYSCAS_23400 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D LYSCAS_23420 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:lcas04148]
D LYSCAS_09400 argI; arginase K01476 rocF; arginase [EC:3.5.3.1]
D LYSCAS_29590 amino acid decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D LYSCAS_19880 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lcas02024]
D LYSCAS_03540 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D LYSCAS_09130 trpE_2; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D LYSCAS_09060 trpG; glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LYSCAS_04760 dhs1; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LYSCAS_15090 kdpE_1; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LYSCAS_22700 kdpE_2; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LYSCAS_01530 hypothetical protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D LYSCAS_01520 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D LYSCAS_28700 rpfF; enoyl-CoA hydratase K13816 rpfF; DSF synthase
D LYSCAS_03830 peptidase M4 K20273 zmpA; zinc metalloprotease ZmpA
D LYSCAS_28690 rpfB; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LYSCAS_28710 rpfC; sensory/regulatory protein RpfC K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D LYSCAS_28720 rpfG; two-component system response regulator K13815 rpfG; two-component system, response regulator RpfG
D LYSCAS_09000 clp; CRP-like protein Clp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LYSCAS_04400 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D LYSCAS_08160 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LYSCAS_22500 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D LYSCAS_12440 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LYSCAS_19710 extracellular protease K14645 K14645; serine protease [EC:3.4.21.-]
D LYSCAS_05160 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D LYSCAS_25070 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D LYSCAS_04830 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LYSCAS_20610 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LYSCAS_07870 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LYSCAS_20490 hypothetical protein K03110 ftsY; fused signal recognition particle receptor
D LYSCAS_11250 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LYSCAS_23600 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lcas02040]
D LYSCAS_10670 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D LYSCAS_18570 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D LYSCAS_03750 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:lcas04980]
D LYSCAS_05750 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D LYSCAS_30210 metH2; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D LYSCAS_30200 metH1; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lcas01501]
D LYSCAS_14060 ampG; MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LYSCAS_02110 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LYSCAS_17960 bla; serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D LYSCAS_22000 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D LYSCAS_31480 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D LYSCAS_22010 BlaI family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LYSCAS_31470 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LYSCAS_06060 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_16070 acrA; multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_06050 acrF; multidrug transporter K18138 acrB; multidrug efflux pump
D LYSCAS_16080 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D LYSCAS_22500 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D LYSCAS_16740 tolC; membrane protein K12340 tolC; outer membrane protein
D LYSCAS_17310 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LYSCAS_10280 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LYSCAS_08010 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LYSCAS_03880 HARLDQ motif MBL-fold protein K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:lcas01502]
D LYSCAS_01550 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LYSCAS_07940 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LYSCAS_29830 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LYSCAS_07990 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LYSCAS_07980 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LYSCAS_07960 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LYSCAS_03200 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lcas01503]
D LYSCAS_08740 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09470 phoQ; two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09480 phoP; DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D LYSCAS_30860 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LYSCAS_09570 hypothetical protein K06079 cutF; copper homeostasis protein (lipoprotein)
D LYSCAS_23950 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LYSCAS_02210 mucD; peptidase S1 K04771 degP; serine protease Do [EC:3.4.21.107]
D LYSCAS_09970 htrA; heat-shock protein K04771 degP; serine protease Do [EC:3.4.21.107]
D LYSCAS_14450 hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LYSCAS_14460 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LYSCAS_06060 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_16070 acrA; multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_06050 acrF; multidrug transporter K18138 acrB; multidrug efflux pump
D LYSCAS_16080 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D LYSCAS_16740 tolC; membrane protein K12340 tolC; outer membrane protein
D LYSCAS_21250 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lcas01000]
C 01001 Protein kinases [BR:lcas01001]
D LYSCAS_04310 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D LYSCAS_20860 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D LYSCAS_11930 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LYSCAS_15990 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D LYSCAS_06550 rsbT; anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D LYSCAS_23420 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D LYSCAS_02830 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LYSCAS_08740 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09470 phoQ; two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_02930 creC; two-component sensor histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D LYSCAS_15080 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LYSCAS_01530 hypothetical protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D LYSCAS_10050 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LYSCAS_22300 hypothetical protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D LYSCAS_10970 algZ; histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D LYSCAS_13140 ntrB; two-component system sensor protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D LYSCAS_07620 pilS; two-component sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D LYSCAS_06200 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D LYSCAS_28710 rpfC; sensory/regulatory protein RpfC K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D LYSCAS_19210 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lcas01009]
D LYSCAS_17790 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LYSCAS_02580 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lcas01002]
D LYSCAS_23310 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LYSCAS_07840 xpsO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LYSCAS_12130 guaA_1; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LYSCAS_28240 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LYSCAS_04440 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LYSCAS_15980 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LYSCAS_23430 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LYSCAS_23440 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D LYSCAS_03330 peptidase M20 K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D LYSCAS_24300 dcp; dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D LYSCAS_12180 peptidase K08604 hap; vibriolysin [EC:3.4.24.25]
D LYSCAS_03830 peptidase M4 K20273 zmpA; zinc metalloprotease ZmpA
D LYSCAS_20770 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D LYSCAS_20780 peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D LYSCAS_29760 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D LYSCAS_03200 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LYSCAS_01550 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LYSCAS_13620 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D LYSCAS_08440 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LYSCAS_10030 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LYSCAS_04370 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D LYSCAS_21450 dapE_2; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LYSCAS_21410 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LYSCAS_17150 pepQ; Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D LYSCAS_17140 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D LYSCAS_24610 peptidase M35 K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20]
D LYSCAS_03620 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LYSCAS_01440 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LYSCAS_02810 putative beta-barrel assembly-enhancing protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D LYSCAS_21290 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D LYSCAS_22000 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D LYSCAS_31480 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D LYSCAS_09460 hypothetical protein K09933 mtfA; MtfA peptidase
D LYSCAS_02210 mucD; peptidase S1 K04771 degP; serine protease Do [EC:3.4.21.107]
D LYSCAS_09970 htrA; heat-shock protein K04771 degP; serine protease Do [EC:3.4.21.107]
D LYSCAS_19710 extracellular protease K14645 K14645; serine protease [EC:3.4.21.-]
D LYSCAS_11060 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D LYSCAS_11070 ptrB; oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D LYSCAS_10240 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LYSCAS_02690 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LYSCAS_02670 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LYSCAS_23690 lexA2; LexA repressor 2 K01356 lexA; repressor LexA [EC:3.4.21.88]
D LYSCAS_02190 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LYSCAS_05540 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LYSCAS_09760 pepL; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LYSCAS_10190 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D LYSCAS_14170 ctp; peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D LYSCAS_21460 acyII; penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D LYSCAS_10450 sppA; protease K04773 sppA; protease IV [EC:3.4.21.-]
D LYSCAS_11140 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D LYSCAS_05950 ansA; isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D LYSCAS_20540 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LYSCAS_21080 pmbA; PmbA protein K03592 pmbA; PmbA protein
D LYSCAS_21060 tldD; TldD protein K03568 tldD; TldD protein
D LYSCAS_11420 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D LYSCAS_30470 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D LYSCAS_03510 hflC; protein HflC K04087 hflC; modulator of FtsH protease HflC
D LYSCAS_03520 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:lcas01003]
D LYSCAS_06410 glycosyl transferase family 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D LYSCAS_18140 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D LYSCAS_30460 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LYSCAS_06310 ponB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D LYSCAS_17310 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LYSCAS_13580 ostA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lcas01005]
D LYSCAS_21250 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LYSCAS_21240 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LYSCAS_07900 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LYSCAS_21270 lpxD; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LYSCAS_04420 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LYSCAS_25330 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LYSCAS_10650 htrB_1; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LYSCAS_16720 htrB_2; lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LYSCAS_16730 kdtA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LYSCAS_30860 eptA; phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D LYSCAS_02540 kdkA; 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D LYSCAS_03760 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LYSCAS_25340 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LYSCAS_18610 haloacid dehalogenase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LYSCAS_18620 kpsF; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LYSCAS_02550 opsX; ADP-heptose--LPS heptosyltransferase K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D LYSCAS_08790 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LYSCAS_08770 hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D LYSCAS_08730 ykcC; putative glycosyltransferase YkcC K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D LYSCAS_18150 gtrB_3; glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lcas01011]
D LYSCAS_18640 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LYSCAS_23750 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LYSCAS_07950 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LYSCAS_08000 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LYSCAS_07940 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LYSCAS_29830 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LYSCAS_07980 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LYSCAS_07960 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LYSCAS_13470 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LYSCAS_02910 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LYSCAS_23280 mviN; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LYSCAS_17310 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LYSCAS_06310 ponB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D LYSCAS_30460 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LYSCAS_10280 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LYSCAS_08010 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LYSCAS_10240 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LYSCAS_18140 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D LYSCAS_01550 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LYSCAS_03200 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LYSCAS_14430 slt; murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LYSCAS_10260 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D LYSCAS_02630 dniR_1; lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D LYSCAS_24130 dniR_2; lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D LYSCAS_02280 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D LYSCAS_10250 rlpA; hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LYSCAS_23950 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LYSCAS_07180 hypothetical protein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:lcas01004]
D LYSCAS_02340 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LYSCAS_01910 fabH_1; protein GumO K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LYSCAS_02350 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LYSCAS_11440 fabF_2; beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LYSCAS_02310 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LYSCAS_02330 fabG_1; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_11490 fabG_3; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_29940 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LYSCAS_21260 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LYSCAS_02640 enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LYSCAS_03090 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D LYSCAS_06450 desC; delta 9 acyl-lipid fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LYSCAS_11900 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LYSCAS_11880 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LYSCAS_28690 rpfB; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LYSCAS_11990 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D LYSCAS_07520 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:lcas01006]
D LYSCAS_21130 ispA; farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LYSCAS_19070 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LYSCAS_21320 uppS; ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LYSCAS_03550 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LYSCAS_12700 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LYSCAS_14320 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:lcas01007]
D LYSCAS_04410 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LYSCAS_05670 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LYSCAS_01450 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D LYSCAS_14100 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LYSCAS_09370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LYSCAS_01280 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LYSCAS_13970 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LYSCAS_24000 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LYSCAS_23300 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LYSCAS_08460 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LYSCAS_20940 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LYSCAS_28740 lysS_1; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LYSCAS_07470 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LYSCAS_29900 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LYSCAS_01120 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LYSCAS_12140 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LYSCAS_12150 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LYSCAS_27490 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LYSCAS_08540 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LYSCAS_20130 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LYSCAS_23720 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LYSCAS_20170 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LYSCAS_20180 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LYSCAS_04670 aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LYSCAS_14730 aspC; aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D LYSCAS_30720 ybdL; aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D LYSCAS_01070 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_27460 hisC2; histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LYSCAS_04530 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LYSCAS_12730 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LYSCAS_17550 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LYSCAS_16990 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LYSCAS_17750 ilvE; branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LYSCAS_27440 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lcas00194]
D LYSCAS_15890 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LYSCAS_15880 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LYSCAS_15870 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LYSCAS_15860 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LYSCAS_15850 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LYSCAS_15840 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LYSCAS_15830 atpE-1; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LYSCAS_15820 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lcas03000]
D LYSCAS_10180 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LYSCAS_05620 oxyR; LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D LYSCAS_30630 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LYSCAS_00730 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LYSCAS_05390 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LYSCAS_22040 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LYSCAS_22110 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LYSCAS_16760 transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D LYSCAS_10170 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LYSCAS_29190 putative HTH-type transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D LYSCAS_28940 fur; transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LYSCAS_04400 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D LYSCAS_09000 clp; CRP-like protein Clp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LYSCAS_07280 transcriptional regulator FNR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D LYSCAS_21980 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LYSCAS_22590 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LYSCAS_03960 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D LYSCAS_22010 BlaI family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LYSCAS_31470 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LYSCAS_09440 birA; bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LYSCAS_16430 putative Fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LYSCAS_14210 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LYSCAS_30640 cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D LYSCAS_11820 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LYSCAS_28920 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D LYSCAS_23820 gcvR; glycine cleavage system transcriptional regulator K03567 gcvR; glycine cleavage system transcriptional repressor
D LYSCAS_21530 hypothetical protein K07733 alpA; prophage regulatory protein
D LYSCAS_29930 paiB; hypothetical protein K07734 paiB; transcriptional regulator
D LYSCAS_18440 UPF0301 protein K07735 algH; putative transcriptional regulator
D LYSCAS_08180 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D LYSCAS_08040 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lcas03021]
D LYSCAS_04790 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LYSCAS_05100 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LYSCAS_05090 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LYSCAS_17230 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LYSCAS_10670 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D LYSCAS_02230 algU_1; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LYSCAS_06430 rpoE_1; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LYSCAS_16850 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LYSCAS_19400 rfaY_2; DNA-directed RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LYSCAS_24540 algU_2; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LYSCAS_02020 Ecf-type RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LYSCAS_15690 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D LYSCAS_10380 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D LYSCAS_18570 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D LYSCAS_24820 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D LYSCAS_08110 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D LYSCAS_05150 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LYSCAS_19910 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D LYSCAS_19920 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D LYSCAS_06550 rsbT; anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D LYSCAS_06560 rsbS; anti-sigma factor antagonist K17762 rsbS; rsbT antagonist protein RsbS
D LYSCAS_06570 rsbR; polyvinyl alcohol dehydrogenase K17763 rsbR; rsbT co-antagonist protein RsbR
D LYSCAS_28810 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D LYSCAS_24080 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D LYSCAS_13230 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:lcas03019]
D LYSCAS_27790 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D LYSCAS_21040 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D LYSCAS_02170 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LYSCAS_22960 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LYSCAS_31120 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D LYSCAS_28280 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LYSCAS_13210 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D LYSCAS_31490 rhlE; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LYSCAS_04180 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LYSCAS_06370 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LYSCAS_03750 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LYSCAS_24870 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LYSCAS_13230 hypothetical protein K03628 rho; transcription termination factor Rho
D LYSCAS_28900 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LYSCAS_16560 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LYSCAS_03540 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D LYSCAS_02840 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LYSCAS_05300 transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LYSCAS_29400 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D LYSCAS_23860 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D LYSCAS_16240 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LYSCAS_23730 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D LYSCAS_18530 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
D LYSCAS_06350 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D LYSCAS_12540 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:lcas03011]
D LYSCAS_27960 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LYSCAS_21400 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LYSCAS_04970 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LYSCAS_04800 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LYSCAS_04860 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LYSCAS_29880 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LYSCAS_05070 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LYSCAS_04890 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LYSCAS_08920 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LYSCAS_05040 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LYSCAS_04810 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LYSCAS_05080 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LYSCAS_04820 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LYSCAS_04900 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LYSCAS_24860 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LYSCAS_23610 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LYSCAS_04940 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LYSCAS_29870 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LYSCAS_04990 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LYSCAS_23270 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LYSCAS_14350 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LYSCAS_04380 hypothetical protein K19033 PSRP4; 30S ribosomal protein S31
D LYSCAS_05130 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LYSCAS_05000 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LYSCAS_05030 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LYSCAS_05020 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LYSCAS_04910 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LYSCAS_04880 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LYSCAS_29860 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LYSCAS_05120 hypothetical protein K02864 RP-L10; large subunit ribosomal protein L10
D LYSCAS_05140 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LYSCAS_05110 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LYSCAS_08930 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LYSCAS_04930 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LYSCAS_04840 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LYSCAS_04960 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LYSCAS_04780 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LYSCAS_04870 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LYSCAS_23640 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LYSCAS_20160 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LYSCAS_23240 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LYSCAS_04980 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LYSCAS_05010 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LYSCAS_04920 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LYSCAS_23250 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LYSCAS_11860 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LYSCAS_04950 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LYSCAS_04850 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LYSCAS_17280 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D LYSCAS_02360 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LYSCAS_11870 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LYSCAS_12420 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D LYSCAS_20150 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LYSCAS_05200 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D LYSCAS_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LYSCAS_r00060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LYSCAS_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LYSCAS_r00040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LYSCAS_r00050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LYSCAS_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lcas03009]
D LYSCAS_02170 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LYSCAS_04310 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D LYSCAS_28280 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LYSCAS_02160 era; GTPase Era K03595 era; GTPase
D LYSCAS_23260 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D LYSCAS_24820 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D LYSCAS_08110 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D LYSCAS_05150 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LYSCAS_15720 rsuA; pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D LYSCAS_05810 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D LYSCAS_10590 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D LYSCAS_15710 rsmC; 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D LYSCAS_20500 ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D LYSCAS_17540 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D LYSCAS_11800 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LYSCAS_08030 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D LYSCAS_08060 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LYSCAS_23000 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D LYSCAS_03630 rlmE; ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D LYSCAS_20990 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D LYSCAS_12860 oxidoreductase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D LYSCAS_02950 rlmJ; ribosomal RNA large subunit methyltransferase J K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D LYSCAS_03050 rlmL; ribosomal RNA large subunit methyltransferase K/L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D LYSCAS_05700 rlmM; ribosomal RNA large subunit methyltransferase M K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D LYSCAS_28090 rlmN; dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D LYSCAS_02120 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D LYSCAS_26090 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D LYSCAS_04540 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LYSCAS_30680 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LYSCAS_27800 rluC; pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D LYSCAS_07560 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LYSCAS_12570 rluE; ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D LYSCAS_10810 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D LYSCAS_31020 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D LYSCAS_06040 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D LYSCAS_08590 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D LYSCAS_17720 rimK; putative alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D LYSCAS_23620 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D LYSCAS_24070 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D LYSCAS_16450 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D LYSCAS_24160 prmB; 50S ribosomal protein L3 glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D LYSCAS_30350 transcriptional regulator K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D LYSCAS_27790 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D LYSCAS_21040 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D LYSCAS_18450 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D LYSCAS_06780 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D LYSCAS_04180 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LYSCAS_14740 rsgA; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LYSCAS_28140 der; GTPase Der K03977 engA; GTPase
D LYSCAS_03530 hflX; GTPase HflX K03665 hflX; GTPase
D LYSCAS_10520 tsaC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LYSCAS_17240 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LYSCAS_24840 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D LYSCAS_24810 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D LYSCAS_04190 hypothetical protein K14761 rlbA; ribosome-associated protein
D LYSCAS_20980 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D LYSCAS_19800 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D LYSCAS_03640 RNA-binding protein K07574 yhbY; RNA-binding protein
D LYSCAS_21070 UPF0307 protein K09889 yjgA; ribosome-associated protein
D LYSCAS_18560 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D LYSCAS_05180 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D LYSCAS_02370 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lcas03016]
D LYSCAS_31120 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D LYSCAS_14420 cca; multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D LYSCAS_04410 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LYSCAS_08540 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LYSCAS_23300 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LYSCAS_20940 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LYSCAS_24000 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LYSCAS_05670 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LYSCAS_13970 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LYSCAS_28740 lysS_1; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LYSCAS_07470 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LYSCAS_23720 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LYSCAS_29900 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LYSCAS_20130 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LYSCAS_27490 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LYSCAS_01280 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LYSCAS_08460 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LYSCAS_01120 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LYSCAS_20170 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LYSCAS_20180 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LYSCAS_14100 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LYSCAS_09370 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LYSCAS_10660 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LYSCAS_26350 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LYSCAS_02450 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LYSCAS_17670 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LYSCAS_24200 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LYSCAS_24850 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D LYSCAS_03710 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D LYSCAS_10520 tsaC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LYSCAS_03550 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LYSCAS_12450 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LYSCAS_12200 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LYSCAS_17570 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D LYSCAS_12430 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LYSCAS_23050 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D LYSCAS_17200 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D LYSCAS_01510 rnD; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D LYSCAS_31110 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D LYSCAS_08210 yjjK; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D LYSCAS_12140 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LYSCAS_12150 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LYSCAS_01450 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D LYSCAS_10340 deacylase K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D LYSCAS_28260 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D LYSCAS_09510 dusA; tRNA-dihydrouridine(20/20a) synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D LYSCAS_17820 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D LYSCAS_19860 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D LYSCAS_23630 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LYSCAS_06040 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D LYSCAS_20650 trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D LYSCAS_13590 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LYSCAS_13710 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D LYSCAS_26090 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D LYSCAS_28650 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LYSCAS_12020 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D LYSCAS_29890 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D LYSCAS_24730 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D LYSCAS_20590 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D LYSCAS_07310 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LYSCAS_16220 ptps; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LYSCAS_07320 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LYSCAS_12650 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LYSCAS_23920 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D LYSCAS_20600 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LYSCAS_21150 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LYSCAS_06270 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LYSCAS_14360 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LYSCAS_23940 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LYSCAS_24640 moeB_1; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D LYSCAS_22960 vacB; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LYSCAS_24870 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:lcas03012]
D LYSCAS_24830 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LYSCAS_20140 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LYSCAS_07500 yheS; ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D LYSCAS_21390 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D LYSCAS_05050 tufA_1; elongation factor Tu-A K02358 tuf; elongation factor Tu
D LYSCAS_05170 tufA_2; elongation factor Tu-A K02358 tuf; elongation factor Tu
D LYSCAS_05060 fusA; elongation factor G K02355 fusA; elongation factor G
D LYSCAS_18990 elongation factor G K02355 fusA; elongation factor G
D LYSCAS_05260 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D LYSCAS_21330 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor
D LYSCAS_05550 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LYSCAS_05190 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D LYSCAS_28600 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LYSCAS_00950 elongation factor P-like protein K02356 efp; elongation factor P
D LYSCAS_01410 efp; elongation factor P K02356 efp; elongation factor P
D LYSCAS_30510 lysS_2; elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D LYSCAS_01420 EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D LYSCAS_28750 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D LYSCAS_18200 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D LYSCAS_13720 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:lcas03110]
D LYSCAS_28610 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D LYSCAS_07510 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D LYSCAS_02680 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D LYSCAS_11150 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D LYSCAS_28900 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LYSCAS_13050 hscC; molecular chaperone HscC K04045 hscC; molecular chaperone HscC
D LYSCAS_16560 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LYSCAS_28890 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LYSCAS_30440 cbpA; cytochrome c biogenesis protein K05516 cbpA; curved DNA-binding protein
D LYSCAS_18130 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D LYSCAS_28910 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D LYSCAS_23650 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D LYSCAS_16550 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D LYSCAS_02210 mucD; peptidase S1 K04771 degP; serine protease Do [EC:3.4.21.107]
D LYSCAS_09970 htrA; heat-shock protein K04771 degP; serine protease Do [EC:3.4.21.107]
D LYSCAS_03620 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LYSCAS_15820 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LYSCAS_25660 hypothetical protein K07346 fimC; fimbrial chaperone protein
D LYSCAS_11250 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LYSCAS_23210 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D LYSCAS_19710 extracellular protease K14645 K14645; serine protease [EC:3.4.21.-]
D LYSCAS_04710 ppiB; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D LYSCAS_02650 ppiD; peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D LYSCAS_30260 fkpA_1; putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D LYSCAS_30270 fkpA_2; peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D LYSCAS_03850 slyD; peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D LYSCAS_05790 surA; chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D LYSCAS_09720 thiol reductase thioredoxin K03671 TXN; thioredoxin
D LYSCAS_13220 trxA; thioredoxin K03671 TXN; thioredoxin
D LYSCAS_20870 trx; co-chaperone YbbN K05838 ybbN; putative thioredoxin
D LYSCAS_02800 hypothetical protein K03676 grxC; glutaredoxin 3
D LYSCAS_14690 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D LYSCAS_20000 glutaredoxin K07390 grxD; monothiol glutaredoxin
D LYSCAS_14450 hypothetical protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LYSCAS_14460 dsbA; thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LYSCAS_04770 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D LYSCAS_08380 dsbC; hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D LYSCAS_16520 dsbD2; thiol:disulfide interchange protein DsbD 2 K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D LYSCAS_30800 dsbE; thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:lcas04131]
D LYSCAS_28080 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LYSCAS_17860 UPF0016 family membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D LYSCAS_06120 putative fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LYSCAS_17510 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LYSCAS_06150 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lcas03032]
D LYSCAS_02600 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LYSCAS_02660 hupB; transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D LYSCAS_20190 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LYSCAS_27970 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LYSCAS_12410 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LYSCAS_21550 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LYSCAS_29850 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LYSCAS_14330 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LYSCAS_19120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LYSCAS_21200 dnaE1; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LYSCAS_12400 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LYSCAS_08450 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LYSCAS_20960 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LYSCAS_02260 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LYSCAS_02590 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LYSCAS_02480 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LYSCAS_21230 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LYSCAS_11340 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LYSCAS_30520 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LYSCAS_18710 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D LYSCAS_30480 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LYSCAS_12380 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LYSCAS_21480 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LYSCAS_03790 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LYSCAS_07590 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LYSCAS_10530 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lcas03036]
D LYSCAS_02170 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LYSCAS_06120 putative fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LYSCAS_08530 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D LYSCAS_02660 hupB; transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D LYSCAS_20190 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LYSCAS_27970 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LYSCAS_30440 cbpA; cytochrome c biogenesis protein K05516 cbpA; curved DNA-binding protein
D LYSCAS_12410 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LYSCAS_06360 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D LYSCAS_16430 putative Fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LYSCAS_03540 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D LYSCAS_10170 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LYSCAS_30540 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein
D LYSCAS_30660 segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D LYSCAS_30670 hypothetical protein K06024 scpB; segregation and condensation protein B
D LYSCAS_07920 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LYSCAS_03740 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D LYSCAS_13200 ftsE; ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D LYSCAS_08010 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LYSCAS_28550 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LYSCAS_08020 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D LYSCAS_07930 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D LYSCAS_07970 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LYSCAS_13190 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D LYSCAS_07910 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LYSCAS_30530 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D LYSCAS_17100 cell division protein ZapA K09888 zapA; cell division protein ZapA
D LYSCAS_17110 TIGR02449 family protein K09892 zapB; cell division protein ZapB
D LYSCAS_12670 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D LYSCAS_23950 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LYSCAS_06060 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_16070 acrA; multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_03290 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D LYSCAS_03300 minD; site-determining protein K03609 minD; septum site-determining protein MinD
D LYSCAS_03310 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D LYSCAS_10310 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LYSCAS_10300 mreC; cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D LYSCAS_10290 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D LYSCAS_10270 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D LYSCAS_11810 parA_1; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D LYSCAS_13370 parA_2; hypothetical protein K03496 parA; chromosome partitioning protein
D LYSCAS_11820 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LYSCAS_21480 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LYSCAS_03790 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LYSCAS_12200 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LYSCAS_11800 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LYSCAS_11110 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D LYSCAS_08390 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D LYSCAS_24020 iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LYSCAS_14480 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:lcas03400]
D LYSCAS_01950 phr; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LYSCAS_13170 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LYSCAS_15330 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D LYSCAS_20470 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LYSCAS_23120 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LYSCAS_17500 endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D LYSCAS_07860 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LYSCAS_14010 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LYSCAS_10180 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LYSCAS_20280 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LYSCAS_03230 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LYSCAS_11910 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LYSCAS_15740 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D LYSCAS_11750 xthA1; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LYSCAS_14050 exoA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LYSCAS_31520 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LYSCAS_03000 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D LYSCAS_28790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LYSCAS_30520 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LYSCAS_11340 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LYSCAS_03480 uvrA2; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D LYSCAS_23230 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D LYSCAS_20110 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D LYSCAS_25360 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D LYSCAS_11370 uvrD; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LYSCAS_05100 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LYSCAS_05090 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LYSCAS_04790 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LYSCAS_17230 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LYSCAS_02980 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LYSCAS_23660 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LYSCAS_23960 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D LYSCAS_30080 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D LYSCAS_01970 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LYSCAS_21140 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LYSCAS_21200 dnaE1; DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LYSCAS_12400 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LYSCAS_08450 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LYSCAS_20960 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LYSCAS_02260 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LYSCAS_02590 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LYSCAS_02480 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LYSCAS_19120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LYSCAS_12950 recB; RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D LYSCAS_12940 recC; RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D LYSCAS_12960 recD; RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D LYSCAS_23700 recA; protein RecA K03553 recA; recombination protein RecA
D LYSCAS_07420 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LYSCAS_07400 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LYSCAS_07430 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LYSCAS_10400 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LYSCAS_23520 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D LYSCAS_12390 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D LYSCAS_17260 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LYSCAS_02150 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LYSCAS_02460 recR; recombination protein RecR K06187 recR; recombination protein RecR
D LYSCAS_28930 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D LYSCAS_12030 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D LYSCAS_24120 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D LYSCAS_16100 ku; non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku
D LYSCAS_25690 lig3; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D LYSCAS_30480 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LYSCAS_12380 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LYSCAS_07590 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LYSCAS_10530 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LYSCAS_02660 hupB; transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D LYSCAS_16430 putative Fis-like DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LYSCAS_20190 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LYSCAS_27970 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LYSCAS_06370 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LYSCAS_08530 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D LYSCAS_31220 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LYSCAS_23690 lexA2; LexA repressor 2 K01356 lexA; repressor LexA [EC:3.4.21.88]
D LYSCAS_17060 CDP-6-deoxy-delta-3,4-glucoseen reductase K14160 imuA; protein ImuA
D LYSCAS_17050 hypothetical protein K14161 imuB; protein ImuB
D LYSCAS_17040 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D LYSCAS_23710 recX; regulatory protein RecX K03565 recX; regulatory protein
D LYSCAS_11950 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D LYSCAS_06290 yoaA; helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D LYSCAS_15390 lhr2; DNA ligase-associated DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D LYSCAS_24880 ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D LYSCAS_09960 nrdJa; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LYSCAS_13860 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LYSCAS_13870 nrdB; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:lcas03029]
D LYSCAS_19890 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LYSCAS_24830 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LYSCAS_20140 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LYSCAS_21390 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D LYSCAS_05050 tufA_1; elongation factor Tu-A K02358 tuf; elongation factor Tu
D LYSCAS_05170 tufA_2; elongation factor Tu-A K02358 tuf; elongation factor Tu
D LYSCAS_05060 fusA; elongation factor G K02355 fusA; elongation factor G
D LYSCAS_18990 elongation factor G K02355 fusA; elongation factor G
D LYSCAS_02160 era; GTPase Era K03595 era; GTPase
D LYSCAS_14100 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LYSCAS_20940 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LYSCAS_07470 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LYSCAS_13970 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LYSCAS_19120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LYSCAS_21280 oma; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D LYSCAS_28900 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LYSCAS_28910 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D LYSCAS_16560 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LYSCAS_16550 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D LYSCAS_28890 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LYSCAS_14690 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D LYSCAS_20000 glutaredoxin K07390 grxD; monothiol glutaredoxin
D LYSCAS_24020 iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LYSCAS_14320 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LYSCAS_14260 cox11; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LYSCAS_14310 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LYSCAS_12440 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LYSCAS_14290 SURF1-like protein K14998 SURF1; surfeit locus 1 family protein
D LYSCAS_07190 SCO family protein K07152 SCO1; protein SCO1
D LYSCAS_24150 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lcas02000]
D LYSCAS_25320 msbA_2; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LYSCAS_15610 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D LYSCAS_02050 draA; ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LYSCAS_24510 msbA_1; ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LYSCAS_31140 uup; ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D LYSCAS_17470 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D LYSCAS_17460 modB; molybdate ABC transporter permease K02018 modB; molybdate transport system permease protein
D LYSCAS_17450 modC; molybdate-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D LYSCAS_30550 ugpC; sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D LYSCAS_08490 ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LYSCAS_12910 yrbD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LYSCAS_08510 yrbE_1; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LYSCAS_12920 yrbE_2; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LYSCAS_08500 yrbF_1; ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LYSCAS_12930 yrbF_2; ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LYSCAS_08480 ABC transporter K18480 linN; cholesterol transport system auxiliary component
D LYSCAS_12900 yrbC; organic solvent ABC transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D LYSCAS_12890 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D LYSCAS_30600 malE; sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D LYSCAS_30590 lacF; sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D LYSCAS_30580 lacG; sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D LYSCAS_23100 phoX; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D LYSCAS_23090 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D LYSCAS_23080 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D LYSCAS_23070 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D LYSCAS_29560 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LYSCAS_18380 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D LYSCAS_06960 znuA; zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D LYSCAS_06950 znuB; ABC transporter K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D LYSCAS_08830 transport permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D LYSCAS_08820 wzt; ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D LYSCAS_08430 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D LYSCAS_08420 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D LYSCAS_18580 yhbG; ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LYSCAS_12470 natB; sodium ABC transporter permease K09696 natB; sodium transport system permease protein
D LYSCAS_12480 natA; sodium ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D LYSCAS_20930 ABC transporter ATP-binding protein K20459 nukF; lantibiotic transport system ATP-binding protein
D LYSCAS_20920 hypothetical protein K20461 nukG; lantibiotic transport system permease protein
D LYSCAS_25270 lolC; cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein
D LYSCAS_25280 lolD; lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LYSCAS_30770 hypothetical protein K02196 ccmD; heme exporter protein D
D LYSCAS_30760 cycZ; heme ABC transporter permease K02195 ccmC; heme exporter protein C
D LYSCAS_30750 cycW; heme exporter protein B K02194 ccmB; heme exporter protein B
D LYSCAS_30740 ccmA; cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D LYSCAS_13190 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D LYSCAS_13200 ftsE; ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D LYSCAS_10060 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LYSCAS_12520 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LYSCAS_15530 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LYSCAS_19850 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LYSCAS_30310 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LYSCAS_02880 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LYSCAS_10070 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LYSCAS_12510 yadG_1; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LYSCAS_15520 yadG_2; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LYSCAS_19840 ABC drugE1 family efflux system ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LYSCAS_30300 nodI; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LYSCAS_05960 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LYSCAS_10100 membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LYSCAS_10110 membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LYSCAS_15940 ybjZ_1; ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LYSCAS_15950 ybjZ_2; ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D LYSCAS_10090 tptC; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LYSCAS_15960 ycfV; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LYSCAS_05970 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LYSCAS_18880 ynhD; ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D LYSCAS_10440 norM; putative multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D LYSCAS_22880 MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D LYSCAS_14060 ampG; MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LYSCAS_13080 tetA; tetracycline resistance MFS efflux pump K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D LYSCAS_03380 bcr; Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LYSCAS_23550 pmrB; MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D LYSCAS_18500 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D LYSCAS_18510 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D LYSCAS_18520 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D LYSCAS_18550 ptsN; PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D LYSCAS_00160 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D LYSCAS_13510 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family
D LYSCAS_04620 gst_1; glutathione S-transferase GST-4.5 K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_05650 gst_2; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_06700 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_24700 gst_3; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_26000 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_31060 gst_4; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LYSCAS_19910 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D LYSCAS_17400 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D LYSCAS_17410 membrane protein K07114 yfbK; Ca-activated chloride channel homolog
D LYSCAS_17620 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D LYSCAS_03440 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel
D LYSCAS_18470 mgtE; magnesium transporter MgtE K06213 mgtE; magnesium transporter
D LYSCAS_12340 exbB_1; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D LYSCAS_25300 exbB_2; biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D LYSCAS_12320 exbD2_1; biopolymer transport protein exbD2 K03559 exbD; biopolymer transport protein ExbD
D LYSCAS_12330 exbD1; biopolymer transport protein exbD1 K03559 exbD; biopolymer transport protein ExbD
D LYSCAS_22760 exbD2_2; biopolymer transport protein exbD2 K03559 exbD; biopolymer transport protein ExbD
D LYSCAS_25310 exbD; biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D LYSCAS_07380 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D LYSCAS_07370 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D LYSCAS_16200 hypothetical protein K03284 corA; magnesium transporter
D LYSCAS_19770 corA; magnesium transporter CorA K03284 corA; magnesium transporter
D LYSCAS_28510 crcB; putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D LYSCAS_19570 DUF1211 domain-containing membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D LYSCAS_20690 tlyC; hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LYSCAS_23110 oprO; porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D LYSCAS_04560 mopB; membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D LYSCAS_14200 ompP1; membrane protein K06076 fadL; long-chain fatty acid transport protein
D LYSCAS_20880 outer membrane usher protein K07347 fimD; outer membrane usher protein
D LYSCAS_25650 hypothetical protein K07347 fimD; outer membrane usher protein
D LYSCAS_17700 estA; lipase/esterase K12686 apeE; outer membrane lipase/esterase
D LYSCAS_19170 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D LYSCAS_18830 bfrE; TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D LYSCAS_16020 btuB_2; TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D LYSCAS_05590 btuB_1; TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LYSCAS_10800 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LYSCAS_10870 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LYSCAS_19340 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LYSCAS_24910 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LYSCAS_29730 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D LYSCAS_16740 tolC; membrane protein K12340 tolC; outer membrane protein
D LYSCAS_24420 oprN; RND transporter K18300 oprN; outer membrane protein, multidrug efflux system
D LYSCAS_22500 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D LYSCAS_23510 capsular polysaccharide biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D LYSCAS_21280 oma; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D LYSCAS_28130 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D LYSCAS_07570 comL; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D LYSCAS_28950 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D LYSCAS_12160 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA
D LYSCAS_12170 hypothetical protein K09800 tamB; translocation and assembly module TamB
D LYSCAS_19720 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D LYSCAS_18590 lptA; lipopolysaccharide export system protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D LYSCAS_18600 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D LYSCAS_05780 lptD; LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D LYSCAS_20950 rlpB; LPS-assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D LYSCAS_19790 ybeX; magnesium transporter K06189 corC; hemolysin (HlyC) family protein
D LYSCAS_22920 suc1; MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D LYSCAS_29570 potE; putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D LYSCAS_29550 histidine-histamine antiporter K03759 adiC; arginine:agmatine antiporter
D LYSCAS_21340 czcD_1; cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D LYSCAS_29260 czcD_2; cation diffusion facilitator transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D LYSCAS_29280 cytochrome-c peroxidase K15726 czcA; heavy metal efflux system protein
D LYSCAS_29040 cation transporter K07787 cusA; copper/silver efflux system protein
D LYSCAS_03390 resistance-nodulation-cell division efflux transporter K18303 mexK; multidrug efflux pump
D LYSCAS_16780 resistance-nodulation-cell division efflux transporter K18303 mexK; multidrug efflux pump
D LYSCAS_06050 acrF; multidrug transporter K18138 acrB; multidrug efflux pump
D LYSCAS_16080 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D LYSCAS_24440 mexF; multidrug efflux RND transporter permease subunit K19585 oqxB; multidrug efflux pump
D LYSCAS_27690 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D LYSCAS_30160 membrane protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D LYSCAS_10140 membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D LYSCAS_22140 membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D LYSCAS_09220 yrbG; sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D LYSCAS_03560 putP; sodium:proline symporter K11928 putP; sodium/proline symporter
D LYSCAS_22420 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D LYSCAS_09210 nhaA; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D LYSCAS_13850 K+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter
D LYSCAS_13250 kefC; potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D LYSCAS_23670 efflux pump/antiporter K26735 KEA4_5_6; K+:H+ antiporter
D LYSCAS_11480 hypothetical protein K26731 CHX; K+:H+ antiporter
D LYSCAS_23280 mviN; putative lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LYSCAS_07410 kup_1; putative potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D LYSCAS_15060 kup_2; putative potassium transport system protein kup K03549 kup; KUP system potassium uptake protein
D LYSCAS_20840 membrane protein K09125 yhhQ; queuosine precursor transporter
D LYSCAS_07970 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LYSCAS_17860 UPF0016 family membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D LYSCAS_20910 membrane protein K15383 K15383; MtN3 and saliva related transmembrane protein
D LYSCAS_06260 tonB; cell envelope biogenesis protein TonB K03832 tonB; periplasmic protein TonB
D LYSCAS_12350 hypothetical protein K03832 tonB; periplasmic protein TonB
D LYSCAS_12460 cell envelope biogenesis protein TonB K03832 tonB; periplasmic protein TonB
D LYSCAS_21000 hypothetical protein K03832 tonB; periplasmic protein TonB
D LYSCAS_07340 ompP6; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D LYSCAS_07360 tolA; protein TolA K03646 tolA; colicin import membrane protein
D LYSCAS_07350 tolB; protein TolB K03641 tolB; TolB protein
D LYSCAS_25620 hypothetical protein K03641 tolB; TolB protein
D LYSCAS_16880 hppA; K(+)-insensitive pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D LYSCAS_23560 multidrug resistance protein K03543 emrA; membrane fusion protein, multidrug efflux system
D LYSCAS_29290 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D LYSCAS_29050 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D LYSCAS_03400 multidrug transporter K18302 mexJ; membrane fusion protein, multidrug efflux system
D LYSCAS_16770 resistance-nodulation-cell division efflux membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D LYSCAS_06060 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_16070 acrA; multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_24450 mexE; MexE family multidrug efflux RND transporter periplasmic adaptor subunit K19586 oqxA; membrane fusion protein, multidrug efflux system
D LYSCAS_23420 tyrosine protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D LYSCAS_00870 feoA; iron transporter K04758 feoA; ferrous iron transport protein A
D LYSCAS_00860 feoB; ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D LYSCAS_30790 cycK; c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D LYSCAS_22340 hypothetical protein K00389 yidH; inner membrane protein YidH
C 02044 Secretion system [BR:lcas02044]
D LYSCAS_16740 tolC; membrane protein K12340 tolC; outer membrane protein
D LYSCAS_04090 gspA; ATPase AAA K02450 gspA; general secretion pathway protein A
D LYSCAS_08250 xpsD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D LYSCAS_08350 xpsE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LYSCAS_08340 xpsF; type II secretion system protein F K02455 gspF; general secretion pathway protein F
D LYSCAS_00240 hypothetical protein K02456 gspG; general secretion pathway protein G
D LYSCAS_08330 xpsG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D LYSCAS_08320 hypothetical protein K02457 gspH; general secretion pathway protein H
D LYSCAS_08310 hypothetical protein K02458 gspI; general secretion pathway protein I
D LYSCAS_08300 xpsJ; type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D LYSCAS_08290 pefK; type II secretion system protein K K02460 gspK; general secretion pathway protein K
D LYSCAS_08280 pefL; type II secretion system protein L K02461 gspL; general secretion pathway protein L
D LYSCAS_08270 xpsM; protein XpsM K02462 gspM; general secretion pathway protein M
D LYSCAS_08260 xpsN; general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D LYSCAS_07840 xpsO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LYSCAS_07640 pilE_1; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_07650 pilE_2; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_22210 pilE_3; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_07820 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D LYSCAS_07830 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D LYSCAS_20050 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D LYSCAS_31330 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D LYSCAS_28100 pilF; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D LYSCAS_06240 pilG; response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D LYSCAS_01940 pilH_1; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_06230 pilH_2; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_30430 pilH_3; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_06220 pilI; pilus biogenesis protein K02659 pilI; twitching motility protein PilI
D LYSCAS_06210 pilJ; pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ
D LYSCAS_17320 pilM; fimbrial assembly protein K02662 pilM; type IV pilus assembly protein PilM
D LYSCAS_17330 pilN; fimbrial protein K02663 pilN; type IV pilus assembly protein PilN
D LYSCAS_17340 pilO; fimbrial protein K02664 pilO; type IV pilus assembly protein PilO
D LYSCAS_17350 pilP; fimbrial protein K02665 pilP; type IV pilus assembly protein PilP
D LYSCAS_17360 pilQ; fimbrial protein K02666 pilQ; type IV pilus assembly protein PilQ
D LYSCAS_18420 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D LYSCAS_08890 uptC; twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D LYSCAS_15580 pilT-2; twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D LYSCAS_18430 pilU; twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D LYSCAS_31370 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D LYSCAS_31360 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D LYSCAS_31350 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D LYSCAS_31340 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D LYSCAS_02250 pilZ; type IV fimbriae assembly protein K02676 pilZ; type IV pilus assembly protein PilZ
D LYSCAS_20100 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D LYSCAS_31380 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D LYSCAS_06630 hypothetical protein K08085 fimU; type IV fimbrial biogenesis protein FimU
D LYSCAS_20060 hypothetical protein K08085 fimU; type IV fimbrial biogenesis protein FimU
D LYSCAS_24190 hypothetical protein K08086 fimV; pilus assembly protein FimV
D LYSCAS_18800 hypothetical protein K02237 comEA; competence protein ComEA
D LYSCAS_25290 comA; DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D LYSCAS_08380 dsbC; hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D LYSCAS_17700 estA; lipase/esterase K12686 apeE; outer membrane lipase/esterase
D LYSCAS_20860 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D LYSCAS_20900 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D LYSCAS_25660 hypothetical protein K07346 fimC; fimbrial chaperone protein
D LYSCAS_20880 outer membrane usher protein K07347 fimD; outer membrane usher protein
D LYSCAS_25650 hypothetical protein K07347 fimD; outer membrane usher protein
D LYSCAS_25640 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LYSCAS_25670 pru; protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LYSCAS_25630 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LYSCAS_07870 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LYSCAS_11250 secB; protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D LYSCAS_20620 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LYSCAS_05160 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D LYSCAS_20630 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D LYSCAS_25070 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D LYSCAS_04830 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LYSCAS_23600 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LYSCAS_20490 hypothetical protein K03110 ftsY; fused signal recognition particle receptor
D LYSCAS_20610 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LYSCAS_12440 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LYSCAS_12090 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D LYSCAS_12100 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D LYSCAS_12110 tatC; sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:lcas02042]
D LYSCAS_20690 tlyC; hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:lcas02022]
D LYSCAS_02830 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D LYSCAS_02820 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D LYSCAS_08740 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09470 phoQ; two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09480 phoP; DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D LYSCAS_02930 creC; two-component sensor histidine kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D LYSCAS_02940 creB; DNA-binding response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D LYSCAS_15080 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D LYSCAS_15090 kdpE_1; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LYSCAS_22700 kdpE_2; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D LYSCAS_21500 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D LYSCAS_01530 hypothetical protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D LYSCAS_01520 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D LYSCAS_27780 gacA; DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LYSCAS_19100 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D LYSCAS_10050 two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D LYSCAS_10040 DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D LYSCAS_22300 hypothetical protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D LYSCAS_10970 algZ; histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D LYSCAS_13140 ntrB; two-component system sensor protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D LYSCAS_13130 ntrC_1; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D LYSCAS_07620 pilS; two-component sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D LYSCAS_07630 pilR; sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D LYSCAS_06200 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D LYSCAS_06240 pilG; response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D LYSCAS_01940 pilH_1; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_06230 pilH_2; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_30430 pilH_3; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_06190 hypothetical protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D LYSCAS_28710 rpfC; sensory/regulatory protein RpfC K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D LYSCAS_28720 rpfG; two-component system response regulator K13815 rpfG; two-component system, response regulator RpfG
D LYSCAS_19210 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:lcas02035]
D LYSCAS_06240 pilG; response regulator K02657 pilG; twitching motility two-component system response regulator PilG
D LYSCAS_01940 pilH_1; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_06230 pilH_2; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_30430 pilH_3; response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D LYSCAS_06220 pilI; pilus biogenesis protein K02659 pilI; twitching motility protein PilI
D LYSCAS_06210 pilJ; pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ
D LYSCAS_06200 hypothetical protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D LYSCAS_07630 pilR; sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D LYSCAS_07620 pilS; two-component sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D LYSCAS_18420 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D LYSCAS_08890 uptC; twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D LYSCAS_15580 pilT-2; twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D LYSCAS_18430 pilU; twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D LYSCAS_06190 hypothetical protein K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D LYSCAS_06180 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D LYSCAS_07640 pilE_1; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_07650 pilE_2; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_22210 pilE_3; pilin K02650 pilA; type IV pilus assembly protein PilA
D LYSCAS_07820 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D LYSCAS_07830 pilC; type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D LYSCAS_07840 xpsO; type 4 prepilin-like proteins leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LYSCAS_28100 pilF; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D LYSCAS_17360 pilQ; fimbrial protein K02666 pilQ; type IV pilus assembly protein PilQ
D LYSCAS_17350 pilP; fimbrial protein K02665 pilP; type IV pilus assembly protein PilP
D LYSCAS_17340 pilO; fimbrial protein K02664 pilO; type IV pilus assembly protein PilO
D LYSCAS_17330 pilN; fimbrial protein K02663 pilN; type IV pilus assembly protein PilN
D LYSCAS_17320 pilM; fimbrial assembly protein K02662 pilM; type IV pilus assembly protein PilM
D LYSCAS_02250 pilZ; type IV fimbriae assembly protein K02676 pilZ; type IV pilus assembly protein PilZ
D LYSCAS_31370 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D LYSCAS_31360 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D LYSCAS_31350 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D LYSCAS_31340 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D LYSCAS_20050 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D LYSCAS_31330 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D LYSCAS_20900 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D LYSCAS_25660 hypothetical protein K07346 fimC; fimbrial chaperone protein
D LYSCAS_20880 outer membrane usher protein K07347 fimD; outer membrane usher protein
D LYSCAS_25650 hypothetical protein K07347 fimD; outer membrane usher protein
D LYSCAS_25640 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LYSCAS_25670 pru; protein U K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LYSCAS_25630 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lcas04812]
D LYSCAS_10310 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LYSCAS_07910 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LYSCAS_07920 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LYSCAS_03290 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D LYSCAS_03300 minD; site-determining protein K03609 minD; septum site-determining protein MinD
D LYSCAS_03310 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D LYSCAS_11810 parA_1; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D LYSCAS_13370 parA_2; hypothetical protein K03496 parA; chromosome partitioning protein
D LYSCAS_11820 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lcas04147]
D LYSCAS_06120 putative fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LYSCAS_03750 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LYSCAS_17510 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LYSCAS_06170 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LYSCAS_06150 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LYSCAS_04370 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D LYSCAS_16560 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LYSCAS_28900 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D LYSCAS_23910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LYSCAS_28230 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LYSCAS_05050 tufA_1; elongation factor Tu-A K02358 tuf; elongation factor Tu
D LYSCAS_05170 tufA_2; elongation factor Tu-A K02358 tuf; elongation factor Tu
D LYSCAS_26350 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LYSCAS_02450 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LYSCAS_28690 rpfB; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D LYSCAS_00790 atoB; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_13090 yfcY; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LYSCAS_03330 peptidase M20 K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D LYSCAS_17790 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LYSCAS_16920 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LYSCAS_01200 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LYSCAS_01250 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LYSCAS_08840 metB_1; cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D LYSCAS_12250 fbp; fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D LYSCAS_13500 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LYSCAS_11620 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LYSCAS_09260 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LYSCAS_27810 phhB; putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LYSCAS_03920 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LYSCAS_04480 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D LYSCAS_16420 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LYSCAS_15800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_30390 ldp; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LYSCAS_08690 etfA; electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit
D LYSCAS_22800 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D LYSCAS_25060 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LYSCAS_06510 blc; outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:lcas02048]
D LYSCAS_10730 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LYSCAS_10740 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LYSCAS_10750 hsdM; type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LYSCAS_00570 membrane protein K07448 mrr; restriction system protein
D LYSCAS_23540 yncN; mRNA interferase K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D LYSCAS_23530 ydcQ; antitoxin K18843 hicB; antitoxin HicB
D LYSCAS_02000 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4
D LYSCAS_06020 death-on-curing protein K07341 doc; death on curing protein
D LYSCAS_30030 vapC; ribonuclease VapC K07062 fitB; toxin FitB [EC:3.1.-.-]
D LYSCAS_30040 hypothetical protein K21495 fitA; antitoxin FitA
D LYSCAS_07910 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LYSCAS_10310 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LYSCAS_21480 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LYSCAS_03790 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LYSCAS_04410 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LYSCAS_25260 hypothetical protein K19168 cptA; toxin CptA
D LYSCAS_24790 hypothetical protein K09159 cptB; antitoxin CptB
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:lcas04090]
D LYSCAS_03330 peptidase M20 K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:lcas01504]
D LYSCAS_13080 tetA; tetracycline resistance MFS efflux pump K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D LYSCAS_22000 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D LYSCAS_31480 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D LYSCAS_22010 BlaI family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LYSCAS_31470 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LYSCAS_03200 peptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D LYSCAS_01550 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LYSCAS_08740 hypothetical protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09470 phoQ; two-component sensor histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D LYSCAS_09480 phoP; DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D LYSCAS_06060 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_16070 acrA; multidrug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LYSCAS_06050 acrF; multidrug transporter K18138 acrB; multidrug efflux pump
D LYSCAS_16080 acrB; multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D LYSCAS_22500 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D LYSCAS_24420 oprN; RND transporter K18300 oprN; outer membrane protein, multidrug efflux system
D LYSCAS_16760 transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D LYSCAS_03400 multidrug transporter K18302 mexJ; membrane fusion protein, multidrug efflux system
D LYSCAS_16770 resistance-nodulation-cell division efflux membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D LYSCAS_03390 resistance-nodulation-cell division efflux transporter K18303 mexK; multidrug efflux pump
D LYSCAS_16780 resistance-nodulation-cell division efflux transporter K18303 mexK; multidrug efflux pump
D LYSCAS_29190 putative HTH-type transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D LYSCAS_16740 tolC; membrane protein K12340 tolC; outer membrane protein
D LYSCAS_19100 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lcas00537]
D LYSCAS_03920 phoA; alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D LYSCAS_04370 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lcas03100]
D LYSCAS_t00250 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LYSCAS_t00280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LYSCAS_t00520 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LYSCAS_t00020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LYSCAS_t00400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LYSCAS_t00230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LYSCAS_t00100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LYSCAS_t00410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LYSCAS_t00320 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LYSCAS_t00050 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LYSCAS_t00470 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LYSCAS_t00190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LYSCAS_t00170 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LYSCAS_t00510 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LYSCAS_t00420 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LYSCAS_t00460 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LYSCAS_t00300 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LYSCAS_t00150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LYSCAS_t00090 tRNA-His K14226 tRNA-His; tRNA His
D LYSCAS_t00260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LYSCAS_t00290 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LYSCAS_t00360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00440 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00480 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00070 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LYSCAS_t00180 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LYSCAS_t00080 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LYSCAS_t00450 tRNA-Met K14230 tRNA-Met; tRNA Met
D LYSCAS_t00210 tRNA-Met K14230 tRNA-Met; tRNA Met
D LYSCAS_t00270 tRNA-Met K14230 tRNA-Met; tRNA Met
D LYSCAS_t00350 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LYSCAS_t00010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LYSCAS_t00110 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LYSCAS_t00340 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LYSCAS_t00040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LYSCAS_t00390 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LYSCAS_t00030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LYSCAS_t00500 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LYSCAS_t00140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LYSCAS_t00200 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LYSCAS_t00380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LYSCAS_t00130 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LYSCAS_t00160 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LYSCAS_t00060 tRNA-Val K14237 tRNA-Val; tRNA Val
D LYSCAS_t00490 tRNA-Val K14237 tRNA-Val; tRNA Val
D LYSCAS_t00330 tRNA-Val K14237 tRNA-Val; tRNA Val
D LYSCAS_r00010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LYSCAS_r00040 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LYSCAS_r00050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LYSCAS_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LYSCAS_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LYSCAS_r00060 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LYSCAS_tm00010 transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D LYSCAS_13940 NADP-dependent 3-hydroxy acid dehydrogenase K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276]
D LYSCAS_13670 cdh; 3-beta hydroxysteroid dehydrogenase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D LYSCAS_24500 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D LYSCAS_13350 iorA; indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D LYSCAS_04590 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D LYSCAS_08610 etf-QO; electron transfer flavoprotein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D LYSCAS_26030 qor; alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D LYSCAS_27500 azoR2; FMN-dependent NADH-azoreductase 2 K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D LYSCAS_19580 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D LYSCAS_05770 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D LYSCAS_00720 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D LYSCAS_27430 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D LYSCAS_01820 cpo; non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D LYSCAS_23810 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LYSCAS_06850 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LYSCAS_19000 osmC; peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D LYSCAS_05600 ahpD; alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D LYSCAS_05610 alkyl hydroperoxide reductase K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D LYSCAS_03030 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D LYSCAS_16670 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D LYSCAS_30840 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D LYSCAS_24370 fpr; ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D LYSCAS_25850 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D LYSCAS_22610 arsC; low molecular weight phosphatase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D LYSCAS_29230 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D LYSCAS_29240 low molecular weight phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D LYSCAS_03340 hypothetical protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D LYSCAS_03680 pcm_1; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D LYSCAS_16750 pcm_2; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D LYSCAS_06480 cfaA; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LYSCAS_06500 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LYSCAS_30990 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LYSCAS_06790 N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D LYSCAS_00920 N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D LYSCAS_28590 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D LYSCAS_02430 membrane protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D LYSCAS_03120 ate; putative arginyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D LYSCAS_13640 fabH_3; 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D LYSCAS_05880 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D LYSCAS_28310 putative phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D LYSCAS_16630 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D LYSCAS_31150 UPF0061 protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D LYSCAS_18540 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D LYSCAS_06090 ymdB; RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D LYSCAS_07390 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LYSCAS_23220 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LYSCAS_27650 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LYSCAS_13380 phosphoglycerate mutase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D LYSCAS_12530 mttC; preprotein translocase subunit TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LYSCAS_24650 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LYSCAS_03080 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LYSCAS_10570 def2; peptide deformylase 2 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LYSCAS_02390 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D LYSCAS_02410 moxR_1; ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LYSCAS_11660 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LYSCAS_17370 moxR_2; ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LYSCAS_13650 dhaA; haloalkane dehalogenase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D LYSCAS_23930 bifunctional NAD(P)H-hydrate repair enzyme K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D LYSCAS_23160 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D LYSCAS_00670 icmF; Fused isobutyryl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D LYSCAS_13660 peptide synthase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D LYSCAS_16930 mpl; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D LYSCAS_23990 ydgM; ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D LYSCAS_27610 cation-transporting P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D LYSCAS_23850 ferredoxin K05524 fdxA; ferredoxin
D LYSCAS_08680 etfB; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D LYSCAS_22540 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D LYSCAS_02070 acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D LYSCAS_18410 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein
D LYSCAS_01220 argA; N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D LYSCAS_27980 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D LYSCAS_27990 lapB; lipopolysaccharide assembly protein B K19804 lapB; lipopolysaccharide assembly protein B
D LYSCAS_31250 membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D LYSCAS_11310 hemY; porphyrin biosynthesis protein K02498 hemY; HemY protein
D LYSCAS_13690 ubiB; putative protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D LYSCAS_13680 sterol-binding protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D LYSCAS_13900 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D LYSCAS_21190 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D LYSCAS_07030 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D LYSCAS_31440 oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D LYSCAS_04150 GntR family transcriptional regulator K15977 K15977; putative oxidoreductase
D LYSCAS_21360 quinol oxidase K15977 K15977; putative oxidoreductase
D LYSCAS_26320 LysR family transcriptional regulator K15977 K15977; putative oxidoreductase
D LYSCAS_28350 hypothetical protein K15977 K15977; putative oxidoreductase
D LYSCAS_10960 carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D LYSCAS_02080 scoF; cold-shock protein K03704 cspA; cold shock protein
D LYSCAS_24600 cspA_1; cold-shock protein K03704 cspA; cold shock protein
D LYSCAS_31010 cspA_2; cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
D LYSCAS_20790 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D LYSCAS_15410 DNA ligase-associated DEXH box helicase K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D LYSCAS_28620 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D LYSCAS_02700 tig; trigger factor K03545 tig; trigger factor
D LYSCAS_27420 msrQ; protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D LYSCAS_28980 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D LYSCAS_13890 comM; ATP-dependent protease K07391 comM; magnesium chelatase family protein
D LYSCAS_20740 hypothetical protein K07394 K07394; SM-20-related protein
D LYSCAS_27820 nfuA; Fe/S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D LYSCAS_20730 methylated-DNA--protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D LYSCAS_13980 UPF0758 protein K03630 radC; DNA repair protein RadC
D LYSCAS_12870 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D LYSCAS_08080 UPF0102 protein K07460 yraN; putative endonuclease
D LYSCAS_10550 smf; DNA processing protein DprA K04096 smf; DNA processing protein
D LYSCAS_28530 recombination factor protein RarA K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D LYSCAS_02470 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D LYSCAS_00970 yhdG_1; amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LYSCAS_03360 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LYSCAS_25250 yhdG_2; amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LYSCAS_27870 acrD_1; transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D LYSCAS_27880 acrD_2; transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D LYSCAS_18000 MFS transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D LYSCAS_09280 yhiP; dihydroorotate dehydrogenase K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LYSCAS_10860 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LYSCAS_19190 ygdR; oligopeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LYSCAS_19640 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LYSCAS_20710 pitA; phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D LYSCAS_17430 gltP; proton glutamate symport protein K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family
D LYSCAS_17840 yeiM; nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D LYSCAS_14160 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
D LYSCAS_04070 competence protein TfoX K07343 tfoX; DNA transformation protein and related proteins
D LYSCAS_20890 yadV; putative fimbrial chaperone YadV K15540 ecpD; chaperone protein EcpD
C 99995 Signaling proteins
D LYSCAS_16340 membrane protein K03807 ampE; AmpE protein
D LYSCAS_19760 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein
D LYSCAS_04720 typA; GTP-binding elongation factor protein K06207 typA; GTP-binding protein
D LYSCAS_19810 ATP-binding protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D LYSCAS_23800 hypothetical protein K07175 phoH2; PhoH-like ATPase
D LYSCAS_03460 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D LYSCAS_22720 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
C 99992 Structural proteins
D LYSCAS_28540 lolA; outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D LYSCAS_05230 lolB; outer-membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D LYSCAS_12880 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D LYSCAS_24620 pcp; hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D LYSCAS_03660 nlpD; lipoprotein K06194 nlpD; lipoprotein NlpD
D LYSCAS_15760 ompW; membrane protein K07275 ompW; outer membrane protein
D LYSCAS_02440 slp; membrane protein K07285 slp; outer membrane lipoprotein
D LYSCAS_18170 membrane protein K07290 yhjG; AsmA family protein
D LYSCAS_17920 membrane protein K07340 ybbJ; inner membrane protein
D LYSCAS_19830 membrane protein K01993 ABC-2.TX; HlyD family secretion protein
D LYSCAS_05980 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D LYSCAS_15970 ybjY; ABC transporter permease K02005 ABC.CD.TX; HlyD family secretion protein
D LYSCAS_02920 creD; cell envelope integrity protein CreD K06143 creD; inner membrane protein
D LYSCAS_30780 ccmE2; cytochrome c-type biogenesis protein CcmE 2 K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D LYSCAS_30810 cycL; cytochrome c biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D LYSCAS_30820 cycH; cytochrome c biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D LYSCAS_28110 membrane protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D LYSCAS_23060 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D LYSCAS_16250 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D LYSCAS_16530 cutA; divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D LYSCAS_05820 apaG; protein ApaG K06195 apaG; ApaG protein
D LYSCAS_15030 pcoB; copper resistance protein B K07233 pcoB; copper resistance protein B
D LYSCAS_29120 copper resistance protein B K07233 pcoB; copper resistance protein B
D LYSCAS_07260 hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D LYSCAS_31170 helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D LYSCAS_05850 plpD; patatin K07001 K07001; NTE family protein
D LYSCAS_11040 hypothetical protein K07001 K07001; NTE family protein
D LYSCAS_09610 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D LYSCAS_16320 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D LYSCAS_18890 ynhE; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D LYSCAS_18870 ynhC; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D LYSCAS_17810 membrane protein K07038 K07038; inner membrane protein
D LYSCAS_05330 UPF0761 membrane protein K07058 K07058; membrane protein
D LYSCAS_25750 rbn; hypothetical protein K07058 K07058; membrane protein
D LYSCAS_01290 hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D LYSCAS_28660 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D LYSCAS_00080 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein K04750 phnB; PhnB protein
D LYSCAS_05940 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein K04750 phnB; PhnB protein
D LYSCAS_26430 putative glyoxalase/bleomycin resistance protein K04750 phnB; PhnB protein
D LYSCAS_05910 hypothetical protein K03744 lemA; LemA protein
D LYSCAS_17970 hypothetical protein K03744 lemA; LemA protein
D LYSCAS_30240 slyX; protein SlyX K03745 slyX; SlyX protein
D LYSCAS_10540 smg; protein Smg K03747 smg; Smg protein
D LYSCAS_10630 membrane protein K08981 K08981; putative membrane protein
D LYSCAS_30850 hypothetical protein K08983 K08983; putative membrane protein
D LYSCAS_12810 membrane protein K08984 yjdF; putative membrane protein
D LYSCAS_18020 membrane protein K08987 K08987; putative membrane protein
D LYSCAS_09830 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D LYSCAS_16180 hypothetical protein K08995 K08995; putative membrane protein
D LYSCAS_31090 hypothetical protein K09914 K09914; putative lipoprotein
D LYSCAS_25870 phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D LYSCAS_13260 ank2; hypothetical protein K06867 K06867; uncharacterized protein
D LYSCAS_05900 hypothetical protein K06872 K06872; uncharacterized protein
D LYSCAS_10490 hypothetical protein K06884 K06884; uncharacterized protein
D LYSCAS_16190 hypothetical protein K06884 K06884; uncharacterized protein
D LYSCAS_28200 hypothetical protein K06889 K06889; uncharacterized protein
D LYSCAS_00390 baseplate protein K06903 W; Bacteriophage baseplate protein W
D LYSCAS_00420 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein
D LYSCAS_00490 tail protein K06907 FI; Bacteriophage tail sheath protein
D LYSCAS_23170 hypothetical protein K06938 K06938; uncharacterized protein
D LYSCAS_15380 phosphoesterase K06953 K06953; uncharacterized protein
D LYSCAS_06460 dehydrogenase K06954 K06954; uncharacterized protein
D LYSCAS_31030 N-acetyltransferase K06975 K06975; uncharacterized protein
D LYSCAS_03280 hypothetical protein K06977 K06977; uncharacterized protein
D LYSCAS_11960 GNAT family acetyltransferase K06977 K06977; uncharacterized protein
D LYSCAS_19450 glyoxalase K06996 K06996; uncharacterized protein
D LYSCAS_09300 nuclease K07004 K07004; uncharacterized protein
D LYSCAS_12680 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D LYSCAS_13440 alpha/beta hydrolase K07019 K07019; uncharacterized protein
D LYSCAS_18740 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein
D LYSCAS_19370 hypothetical protein K07112 K07112; uncharacterized protein
D LYSCAS_19380 hypothetical protein K07112 K07112; uncharacterized protein
D LYSCAS_18920 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D LYSCAS_08070 hypothetical protein K07121 K07121; uncharacterized protein
D LYSCAS_26020 hypothetical protein K07137 K07137; uncharacterized protein
D LYSCAS_03840 yxaH; transporter K07148 K07148; uncharacterized protein
D LYSCAS_16940 ATP-dependent protease K07157 K07157; uncharacterized protein
D LYSCAS_01320 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D LYSCAS_17030 hypothetical protein K09005 K09005; uncharacterized protein
D LYSCAS_14340 hypothetical protein K09117 K09117; uncharacterized protein
D LYSCAS_10220 UPF0250 protein K09158 K09158; uncharacterized protein
D LYSCAS_23970 hypothetical protein K09164 K09164; uncharacterized protein
D LYSCAS_10640 membrane protein K09167 K09167; uncharacterized protein
D LYSCAS_06470 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D LYSCAS_30650 hypothetical protein K09780 K09780; uncharacterized protein
D LYSCAS_27630 hypothetical protein K09792 K09792; uncharacterized protein
D LYSCAS_24590 membrane protein K09793 K09793; uncharacterized protein
D LYSCAS_28960 UPF0125 protein K09801 K09801; uncharacterized protein
D LYSCAS_21020 bp26; SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D LYSCAS_17130 UPF0149 protein K09895 K09895; uncharacterized protein
D LYSCAS_13270 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D LYSCAS_26190 hypothetical protein K09912 K09912; uncharacterized protein
D LYSCAS_28580 hypothetical protein K09919 K09919; uncharacterized protein
D LYSCAS_28320 hypothetical protein K09920 K09920; uncharacterized protein
D LYSCAS_11100 hypothetical protein K09921 K09921; uncharacterized protein
D LYSCAS_06010 hypothetical protein K09922 K09922; uncharacterized protein
D LYSCAS_28370 UPF0276 protein K09930 K09930; uncharacterized protein
D LYSCAS_18690 hypothetical protein K09938 K09938; uncharacterized protein
D LYSCAS_21100 hypothetical protein K09940 K09940; uncharacterized protein
D LYSCAS_15730 hypothetical protein K09941 K09941; uncharacterized protein
D LYSCAS_28210 cell division protein DedD K09948 K09948; uncharacterized protein
D LYSCAS_23980 TraB/GumN family protein K09973 K09973; uncharacterized protein
D LYSCAS_18810 hypothetical protein K09975 K09975; uncharacterized protein
D LYSCAS_00110 hypothetical protein K09981 K09981; uncharacterized protein
D LYSCAS_09670 hypothetical protein K09983 K09983; uncharacterized protein
D LYSCAS_10130 hypothetical protein K09984 K09984; uncharacterized protein
D LYSCAS_31180 hypothetical protein K07502 yprB; uncharacterized protein
D LYSCAS_20700 hypothetical protein K07220 K07220; uncharacterized protein
D LYSCAS_16640 nucleoside-diphosphate sugar epimerase K07276 K07276; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 19, 2024