+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Lacticaseibacillus paracasei BL23

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E LCABL_18210 rnc; Ribonuclease 3 (Ribonuclease III) (RNase III) K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D LCABL_23350 yuaG; Uncharacterized protein yuaG K07192 FLOT; flotillin C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) C HU (heat unstable protein) D LCABL_16010 hbsU; Histone-like DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) C Other nucleoid associated proteins D LCABL_00010 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D LCABL_18200 smc; Chromosome seggregation Smc protein K03529 smc; chromosome segregation protein D LCABL_15900 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A D LCABL_15910 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B C Divisome proteins D LCABL_15040 ftsA; Cell division protein, FtsA K03590 ftsA; cell division protein FtsA D LCABL_27110 divIC; DivIC protein (Fragment) K13052 divIC; cell division protein DivIC D LCABL_10450 ftsE; Cell-division associated ABC transporter, ATP binding FtsE subunit K09812 ftsE; cell division transport system ATP-binding protein D LCABL_10290 ftsK; Cell division DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LCABL_19310 ftsK1; Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LCABL_14980 Cell division protein FtsL K03586 ftsL; cell division protein FtsL D LCABL_15030 ftsQ; Cell division protein, FtsQ K03589 ftsQ; cell division protein FtsQ D LCABL_15440 ftsW; Cell division protein K03588 ftsW; cell division protein FtsW D LCABL_10460 ftsX; Cell-division associated ABC transporter, membrane FtsX subunit K09811 ftsX; cell division transport system permease protein D LCABL_15050 ftsZ; Cell division protein, FtsZ K03531 ftsZ; cell division protein FtsZ D LCABL_08500 Stimulator of FtsZ polymerization and component of cell-division Z-ring K09888 zapA; cell division protein ZapA D LCABL_17510 ami; N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C Inhibitors of FtsZ assembly D LCABL_14770 ezrA; Septation ring formation regulator ezrA K06286 ezrA; septation ring formation regulator D LCABL_14880 minC; Cell division inhibitor K03610 minC; septum site-determining protein MinC D LCABL_14890 minD; Septum formation-inhibiting ATPase, ATPase ParA-type K03609 minD; septum site-determining protein MinD D LCABL_15090 divIVA; Cell-division initiation protein (Septum placement) K04074 divIVA; cell division initiation protein D LCABL_15060 ylmF; YlmF K09772 sepF; cell division inhibitor SepF C Other chromosome partitioning proteins D LCABL_13910 mbl; Cell shape determining protein, MerB family K03569 mreB; rod shape-determining protein MreB and related proteins D LCABL_14850 mreB; Cell shape determining protein MreB, actin-like K03569 mreB; rod shape-determining protein MreB and related proteins D LCABL_14860 mreC; Cell shape determining lipoprotein K03570 mreC; rod shape-determining protein MreC D LCABL_14870 mreD; Cell shape determining protein K03571 mreD; rod shape-determining protein MreD D LCABL_13950 rodA2; Rod-shape determining protein K05837 rodA; rod shape determining protein RodA D LCABL_02010 parA; Chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D LCABL_02020 parB2; Chromosome partitioning protein, DNA-binding exonuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LCABL_02000 parB2; Chromosome partitioning protein, DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LCABL_16330 parC; Topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LCABL_16320 parE; Topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LCABL_31220 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (Glucose-inhibited division protein A) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LCABL_01990 gidB; Methyltransferase gidB (Glucose-inhibited division protein B) K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LCABL_16260 gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D LCABL_16270 xerC; Tyrosine recombinase xerC K03733 xerC; integrase/recombinase XerC D LCABL_15880 xerD; Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD D LCABL_15620 engB; Probable GTP-binding protein engB K03978 engB; GTP-binding protein D LCABL_10750 Putative uncharacterized protein K09762 whiA; cell division protein WhiA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024