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Transcription Machinery - Leishmania donovani
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E LDBPK_312680 RNA polymerase II largest subunit K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
E LDBPK_310170 DNA-directed RNA polymerase II subunit 2, putative K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E LDBPK_290140 DNA-directed RNA polymerase I-like protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E LDBPK_271450 DNA-directed RNA polymerase II-like protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E LDBPK_321340 RNA polymerase-like protein, putative K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E LDBPK_280120 DNA-direcetd RNA polymerase II, subunit 9, putative K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
D Pol I, II, III common subunits
E LDBPK_180780 DNA-directed RNA polymerases II, putative K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E LDBPK_340940 DNA-directed RNA polymerase subunit, putative K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E LDBPK_280870 RNA polymerase B subunit RPB8, putative K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E LDBPK_251350 DNA-directed RNA polymerase II K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E LDBPK_131020 DNA-directed RNA polymerase II 8.2 Kd polypeptide, putative K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
E LDBPK_191430 transcription initiation factor-like protein (TFIID-like protein) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIE
D TFIIF
D TFIIH
E LDBPK_241750 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E LDBPK_360860 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E LDBPK_324070 helicase, putative K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E LDBPK_242370 TFIIH basal transcription factor complex helicase subunit, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
E LDBPK_050890 hypothetical protein K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
E LDBPK_332950 transcription elongation factor-like protein K03145 TFIIS; transcription elongation factor S-II
E LDBPK_240200 transcription elongation factor, putative K03145 TFIIS; transcription elongation factor S-II
E LDBPK_352440 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E LDBPK_272220 transcription elongation regulator-like protein K15172 SUPT5H; transcription elongation factor SPT5
D Transcription termination factor
E LDBPK_321400 cleavage and polyadenylation specificity factor-like protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E LDBPK_343210 cleavage and polyadenylation specificity factor, putative K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E LDBPK_090770 cleavage and polyadenylation specificity factor 30 kDa subunit, putative K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E LDBPK_280730 serine/threonine protein phosphatase catalytic subunit, putative K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E LDBPK_312700 serine/threonine protein phosphatase pp1(5.9), putative K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E LDBPK_340850 serine/threonine-protein phosphatase PP1, putative K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E LDBPK_361870 exoribonuclease 2, putative K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E LDBPK_230600 5'-3' exonuclease XRNC, putative K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E LDBPK_220410 hypothetical protein K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
D PAF1 complex
E LDBPK_364170 hypothetical protein K15175 CDC73; parafibromin
E LDBPK_292660 hypothetical protein K15176 CTR9; RNA polymerase-associated protein CTR9
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
E LDBPK_292510 hypothetical protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E LDBPK_260140 nuclear lim interactor-interacting factor-like protein K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E LDBPK_272340 TPR-repeat protein, putative K23002 RPAP3; RNA polymerase II-associated protein 3
E LDBPK_131180 XPA-interacting protein, putative K24104 GPN; GPN-loop GTPase
E LDBPK_251430 hypothetical protein K24104 GPN; GPN-loop GTPase
E LDBPK_260470 hypothetical protein K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E LDBPK_340380 DNA-directed RNA polymerase III largest subunit , putative K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E LDBPK_190660 DNA-directed RNA polymerase, alpha subunit, putative K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E LDBPK_282200 DNA-directed RNA polymerase-like protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E LDBPK_190420 RNA polymerase III C11 subunit, putative K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E LDBPK_180780 DNA-directed RNA polymerases II, putative K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E LDBPK_340940 DNA-directed RNA polymerase subunit, putative K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E LDBPK_280870 RNA polymerase B subunit RPB8, putative K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E LDBPK_251350 DNA-directed RNA polymerase II K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E LDBPK_131020 DNA-directed RNA polymerase II 8.2 Kd polypeptide, putative K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
D TFIIIB
E LDBPK_191430 transcription initiation factor-like protein (TFIID-like protein) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E LDBPK_250450 transcription factor, putative K15196 BRF1; transcription factor IIIB 90 kDa subunit
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E LDBPK_354730 small nuclear RNA gene activation protein (SNAP) 50, putative K15210 SNAPC3; snRNA-activating protein complex subunit 3
D Octamer transcription factors
D Others
E LDBPK_312920 hypothetical protein K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E LDBPK_161420 DNA-directed rna polymerase I largest subunit, putative K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E LDBPK_250630 RNA polymerase I second largest subunit, putative K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E LDBPK_190660 DNA-directed RNA polymerase, alpha subunit, putative K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E LDBPK_282200 DNA-directed RNA polymerase-like protein K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
D Pol I, II, III common subunits
E LDBPK_180780 DNA-directed RNA polymerases II, putative K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E LDBPK_340940 DNA-directed RNA polymerase subunit, putative K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E LDBPK_280870 RNA polymerase B subunit RPB8, putative K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E LDBPK_251350 DNA-directed RNA polymerase II K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
E LDBPK_131020 DNA-directed RNA polymerase II 8.2 Kd polypeptide, putative K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E LDBPK_191430 transcription initiation factor-like protein (TFIID-like protein) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
E LDBPK_352440 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4
E LDBPK_272220 transcription elongation regulator-like protein K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
E LDBPK_331800 transcription activator K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024