+D GENES KO
#
KEGG Orthology (KO) - Leisingera sp. M523
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:leim00010]
D K3557_02945 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D K3557_08895 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D K3557_12500 glpX; (GenBank) class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D K3557_04700 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D K3557_10940 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D K3557_02970 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_08070 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_13910 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_07870 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D K3557_20075 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D K3557_06360 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D K3557_01940 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D K3557_03490 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D K3557_07860 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D K3557_07850 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D K3557_07845 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_02535 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D K3557_01850 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_09490 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_11460 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_04440 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D K3557_16955 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:leim00020]
D K3557_08190 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D K3557_07505 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D K3557_13115 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D K3557_14320 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D K3557_14325 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14310 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D K3557_14295 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D K3557_14205 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D K3557_14195 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D K3557_14215 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D K3557_14210 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D K3557_07125 fumC; (GenBank) class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D K3557_14290 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D K3557_11910 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D K3557_16955 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D K3557_07860 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D K3557_07850 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D K3557_07845 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:leim00030]
D K3557_08895 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D K3557_08905 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D K3557_15730 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D K3557_08900 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D K3557_13945 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D K3557_08085 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D K3557_03095 fsa; (GenBank) fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D K3557_04785 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D K3557_17750 deoC; (GenBank) deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D K3557_18850 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D K3557_10055 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D K3557_04440 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D K3557_15600 phnN; (GenBank) phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D K3557_04000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D K3557_15735 edd; (GenBank) phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D K3557_15740 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D K3557_04700 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D K3557_12500 glpX; (GenBank) class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:leim00040]
D K3557_19115 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D K3557_13945 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D K3557_03750 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D K3557_08480 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:leim00051]
D K3557_04440 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D K3557_08480 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D K3557_12500 glpX; (GenBank) class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D K3557_04700 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D K3557_10940 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D K3557_16930 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:leim00052]
D K3557_19120 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D K3557_19115 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D K3557_04440 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D K3557_02945 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D K3557_15485 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D K3557_02855 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
C 00053 Ascorbate and aldarate metabolism
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:leim00500]
D K3557_19115 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D K3557_04440 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D K3557_02945 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D K3557_08895 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:leim00620]
D K3557_09490 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_11460 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_07860 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D K3557_07850 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D K3557_07845 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_01850 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D K3557_02535 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D K3557_15790 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D K3557_01940 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D K3557_01870 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D K3557_09715 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D K3557_09720 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D K3557_20120 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D K3557_07040 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_02710 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D K3557_02180 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D K3557_11905 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D K3557_13095 FAD-binding protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D K3557_05740 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D K3557_03900 gloB; (GenBank) hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D K3557_01000 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D K3557_03000 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D K3557_10075 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D K3557_18845 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D K3557_11910 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D K3557_14290 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D K3557_07125 fumC; (GenBank) class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D K3557_16955 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D K3557_03490 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D K3557_11680 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_01040 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D K3557_08555 cimA; (GenBank) citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:leim00630]
D K3557_11680 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D K3557_14290 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D K3557_08190 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D K3557_07505 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D K3557_01895 L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D K3557_14275 CoA ester lyase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30]
D K3557_09490 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_11460 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14430 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D K3557_04045 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D K3557_14140 ccrA; (GenBank) crotonyl-CoA carboxylase/reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D K3557_04360 mce; (GenBank) methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D K3557_14155 protein meaA K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D K3557_16980 acyl-CoA/acyl-ACP dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D K3557_14260 MaoC family dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D K3557_05490 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D K3557_05450 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D K3557_05510 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D K3557_16230 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D K3557_16225 FAD-binding protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D K3557_16220 glcF; (GenBank) glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D K3557_13410 catalase K03781 katE; catalase [EC:1.11.1.6]
D K3557_13430 catalase K03781 katE; catalase [EC:1.11.1.6]
D K3557_13105 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D K3557_01000 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D K3557_03000 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D K3557_11495 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D K3557_12535 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D K3557_16570 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D K3557_04665 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D K3557_02985 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05915 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05925 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_07590 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13885 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13990 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_10105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D K3557_02380 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D K3557_00505 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D K3557_02390 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_02385 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D K3557_02990 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D K3557_01805 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D K3557_15740 eda; (GenBank) bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D K3557_00230 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D K3557_00225 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
C 00640 Propanoate metabolism [PATH:leim00640]
D K3557_09490 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_11460 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_10085 prpE; (GenBank) propionate-CoA ligase PrpE K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D K3557_02710 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D K3557_15790 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D K3557_19385 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07170 acuI; (GenBank) acryloyl-CoA reductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_01870 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D K3557_09715 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D K3557_09720 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D K3557_20120 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D K3557_05490 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D K3557_05450 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D K3557_04360 mce; (GenBank) methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D K3557_05510 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D K3557_14295 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D K3557_14310 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D K3557_08045 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D K3557_07505 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:leim00650]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_16915 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D K3557_00405 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D K3557_13950 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_17895 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D K3557_04045 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D K3557_05870 phaC; (GenBank) class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D K3557_05865 phaZ; (GenBank) polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D K3557_14430 phbB; (GenBank) acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D K3557_01805 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D K3557_00795 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D K3557_02650 eutA; (GenBank) ectoine utilization protein EutA K01799 nicE; maleate isomerase [EC:5.2.1.1]
D K3557_16375 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D K3557_14205 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D K3557_14195 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D K3557_14215 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D K3557_14210 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D K3557_11950 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D K3557_01800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_16195 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_11440 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D K3557_03325 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D K3557_03320 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D K3557_08985 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D K3557_02245 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_09840 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_10740 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_10745 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00660 C5-Branched dibasic acid metabolism [PATH:leim00660]
D K3557_02245 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_09840 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_10740 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_10745 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D K3557_14295 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D K3557_14310 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D K3557_01895 L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D K3557_14260 MaoC family dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D K3557_16265 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D K3557_16275 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D K3557_16290 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:leim00562]
D K3557_06035 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D K3557_19565 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D K3557_08045 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D K3557_10940 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:leim00190]
D K3557_11430 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D K3557_11425 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D K3557_11420 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D K3557_11415 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D K3557_11410 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D K3557_11400 nuoF; (GenBank) NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D K3557_11380 nuoG; (GenBank) NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D K3557_11370 nuoH; (GenBank) NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D K3557_11360 nuoI; (GenBank) NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D K3557_11350 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D K3557_11345 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D K3557_11340 nuoL; (GenBank) NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D K3557_11335 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D K3557_11330 nuoN; (GenBank) NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D K3557_14205 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D K3557_14195 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D K3557_14215 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D K3557_14210 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D K3557_19300 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D K3557_19305 petB; (GenBank) cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D K3557_19310 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D K3557_03350 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D K3557_03810 cytochrome C oxidase subunit IV family protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D K3557_03365 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D K3557_03800 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D K3557_03805 heme-copper oxidase subunit III family protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D K3557_03600 cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D K3557_03795 cbb3-type cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D K3557_13360 cbb3-type cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D K3557_03345 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D K3557_03790 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D K3557_13365 cytochrome C oxidase subunit I K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D K3557_03360 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D K3557_08940 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D K3557_13390 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D K3557_15015 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D K3557_13385 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D K3557_15010 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D K3557_13380 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D K3557_15005 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D K3557_13375 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D K3557_15000 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D K3557_13335 cytochrome c family protein K08738 CYC; cytochrome c
D K3557_15070 c-type cytochrome K08738 CYC; cytochrome c
D K3557_19930 cytochrome C K08738 CYC; cytochrome c
D K3557_03915 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D K3557_03925 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D K3557_03920 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D K3557_03910 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D K3557_03930 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D K3557_17200 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D K3557_17185 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D K3557_17190 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D K3557_17195 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D K3557_04080 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D K3557_09240 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D K3557_15220 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:leim00710]
D K3557_07870 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D K3557_02970 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_08070 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_13910 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_04700 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D K3557_12500 glpX; (GenBank) class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D K3557_08085 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D K3557_04785 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D K3557_10940 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D K3557_13945 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D K3557_03095 fsa; (GenBank) fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D K3557_16955 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D K3557_03490 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D K3557_10075 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D K3557_18845 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D K3557_14290 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:leim00720]
D K3557_03490 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D K3557_11910 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D K3557_14290 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D K3557_07125 fumC; (GenBank) class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D K3557_14205 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D K3557_14195 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D K3557_14215 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D K3557_14210 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D K3557_14310 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D K3557_14295 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_13115 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D K3557_07505 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D K3557_01870 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D K3557_09715 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D K3557_09720 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D K3557_20120 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D K3557_01895 L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D K3557_14260 MaoC family dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D K3557_15845 acyl dehydratase K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153]
D K3557_04360 mce; (GenBank) methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D K3557_05510 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D K3557_03205 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D K3557_03215 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D K3557_06020 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D K3557_08395 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D K3557_15790 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D K3557_09490 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_11460 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:leim00680]
D K3557_02535 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D K3557_20175 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D K3557_00230 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D K3557_00225 NAD(P)H-dependent oxidoreductase subunit E K22515 fdwB; formate dehydrogenase beta subunit [EC:1.17.1.9]
D K3557_10105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D K3557_04665 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D K3557_06360 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D K3557_14290 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D K3557_01895 L-malyl-CoA/beta-methylmalyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D K3557_04700 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D K3557_12500 glpX; (GenBank) class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D K3557_00515 NAD(P)-binding protein K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D K3557_00560 NAD(P)-binding protein K00317 dmd-tmd; dimethylamine/trimethylamine dehydrogenase [EC:1.5.8.1 1.5.8.2]
D K3557_12430 sarcosine oxidase subunit beta family protein K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
D K3557_12425 sarcosine oxidase subunit delta K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
D K3557_12420 sarcosine oxidase subunit alpha family protein K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
D K3557_12415 sarcosine oxidase subunit gamma K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]
D K3557_15790 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D K3557_09490 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_11460 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_20075 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D K3557_17955 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D K3557_17960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D K3557_17965 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D K3557_00840 trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D K3557_02345 trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D K3557_02430 trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D K3557_08575 trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D K3557_09195 trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D K3557_12530 trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
C 00910 Nitrogen metabolism [PATH:leim00910]
D K3557_14815 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D K3557_14820 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D K3557_14825 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D K3557_19835 napA; (GenBank) nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D K3557_19840 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D K3557_14840 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D K3557_14830 nirB; (GenBank) nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D K3557_14835 nirD; (GenBank) nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D K3557_19200 nirK; (GenBank) nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D K3557_02765 cbb3-type cytochrome c oxidase subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D K3557_02760 cytochrome c K02305 norC; nitric oxide reductase subunit C
D K3557_02290 nosZ; (GenBank) TAT-dependent nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D K3557_00640 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D K3557_12435 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D K3557_02985 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05915 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05925 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_07590 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13885 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13990 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_18520 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D K3557_18530 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D K3557_00110 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D K3557_01540 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D K3557_20235 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:leim00920]
D K3557_01480 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D K3557_02325 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D K3557_02335 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein
D K3557_02330 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D K3557_04200 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D K3557_19105 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D K3557_10995 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D K3557_15795 molybdopterin oxidoreductase family protein K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D K3557_15800 4Fe-4S dicluster domain-containing protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D K3557_15805 dimethyl sulfoxide reductase anchor subunit K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D K3557_09785 soxA; (GenBank) sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D K3557_09800 soxX; (GenBank) sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D K3557_09795 soxY; (GenBank) thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D K3557_09790 soxZ; (GenBank) thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D K3557_09780 soxB; (GenBank) thiosulfohydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D K3557_01685 soxC; (GenBank) sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D K3557_09775 soxC; (GenBank) sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D K3557_01680 cytochrome c K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D K3557_09770 c-type cytochrome K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D K3557_10990 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D K3557_16045 sseA; (GenBank) 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D K3557_07835 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D K3557_00345 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D K3557_07205 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D K3557_07840 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D K3557_09230 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D K3557_05145 metZ; (GenBank) O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D K3557_11155 selenium-binding family protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D K3557_13810 cupin domain-containing protein K16953 dddL; dimethylpropiothetin dethiomethylase [EC:4.4.1.3]
D K3557_07165 dimethylsulfoniopropionate demethylase K17486 dmdA; dimethylsulfoniopropionate demethylase [EC:2.1.1.269]
D K3557_10035 AMP-binding protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D K3557_03650 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D K3557_09985 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D K3557_14560 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D K3557_03655 dmdD; (GenBank) methylthioacryloyl-CoA hydratase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
D K3557_07570
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:leim00061]
D K3557_01870 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D K3557_09715 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D K3557_09720 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D K3557_20120 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D K3557_07710 acyl carrier protein K02078 acpP; acyl carrier protein
D K3557_08705 acyl carrier protein K02078 acpP; acyl carrier protein
D K3557_07700 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D K3557_19380 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D K3557_06260 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D K3557_15420 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D K3557_07730 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D K3557_07705 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_11265 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_19945 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_15415 fabA; (GenBank) bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D K3557_09370 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D K3557_08265 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D K3557_15425 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D K3557_09705 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_13555 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_17680 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:leim00071]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_00405 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D K3557_13950 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D K3557_10395 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D K3557_18440 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D K3557_09995 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D K3557_08580 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D K3557_09705 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_13555 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_17680 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_19535 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D K3557_15975 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D K3557_02535 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D K3557_01850 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:leim00074]
D K3557_17025 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D K3557_07710 acyl carrier protein K02078 acpP; acyl carrier protein
D K3557_08705 acyl carrier protein K02078 acpP; acyl carrier protein
D K3557_07700 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D K3557_19380 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis [PATH:leim00100]
D K3557_05980 sterol desaturase family protein K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:leim00121]
D K3557_14870 SDR family oxidoreductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:leim00561]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19915 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D K3557_14145 1-acyl-sn-glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D K3557_06265 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D K3557_14635 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D K3557_14355 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:leim00564]
D K3557_18600 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D K3557_12715 glpD; (GenBank) glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D K3557_14145 1-acyl-sn-glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D K3557_14635 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D K3557_14355 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D K3557_12235 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D K3557_10930 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D K3557_16165 class I SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D K3557_09395 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D K3557_03075 CDP-alcohol phosphatidyltransferase family protein K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D K3557_16170 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D K3557_09290 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D K3557_14715 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D K3557_09130 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D K3557_08425 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:leim00592]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:leim01040]
D K3557_01110 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D K3557_08295 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:leim00230]
D K3557_07200 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D K3557_10055 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D K3557_04440 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D K3557_04000 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D K3557_11165 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D K3557_04855 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D K3557_07005 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D K3557_08130 purL; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D K3557_07065 purS; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D K3557_07070 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D K3557_07000 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D K3557_04145 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D K3557_04150 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D K3557_07060 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D K3557_07550 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D K3557_17845 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D K3557_03410 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D K3557_12995 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D K3557_09940 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D K3557_11185 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D K3557_14165 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D K3557_04240 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D K3557_09155 hpt; (GenBank) hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D K3557_08865 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D K3557_06505 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D K3557_18815 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D K3557_08260 gpt; (GenBank) xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D K3557_13005 xdhA; (GenBank) xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D K3557_13010 xdhB; (GenBank) xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D K3557_09200 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D K3557_05310 guaD; (GenBank) guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D K3557_08630 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D K3557_08290 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D K3557_12960 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D K3557_06180 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D K3557_16960 dgt; (GenBank) dNTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D K3557_04900 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D K3557_18635 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D K3557_17045 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D K3557_05550 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D K3557_08405 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D K3557_01500 response regulator K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_01705 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_01835 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_04205 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_05880 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_09250 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_17340 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_17765 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_19500 DUF427 domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_19530 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D K3557_04745 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D K3557_18465 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D K3557_18460 ade; (GenBank) adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D K3557_15085 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D K3557_05325 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D K3557_09495 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D K3557_16625 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D K3557_06390 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D K3557_05240 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D K3557_10785 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D K3557_04200 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:leim00240]
D K3557_04320 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D K3557_03575 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D K3557_14615 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D K3557_11085 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D K3557_14630 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D K3557_09950 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D K3557_11100 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D K3557_17590 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D K3557_09410 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D K3557_06505 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D K3557_06390 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D K3557_18765 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D K3557_04720 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D K3557_00765 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D K3557_12995 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D K3557_09940 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D K3557_11185 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D K3557_10050 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D K3557_15085 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D K3557_05325 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D K3557_08970 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D K3557_10065 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D K3557_05695 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D K3557_06240 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D K3557_08290 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D K3557_12960 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D K3557_04900 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D K3557_18635 HD family hydrolase K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D K3557_12810 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D K3557_00980 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D K3557_10060 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D K3557_04295 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D K3557_05755 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D K3557_09575 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D K3557_09570 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D K3557_09555 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D K3557_09560 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D K3557_13245 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D K3557_17700 hydantoinase/carbamoylase family amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:leim00250]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_15660 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D K3557_04665 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D K3557_15230 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D K3557_18880 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D K3557_14390 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D K3557_04745 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D K3557_07550 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D K3557_14615 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D K3557_11950 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D K3557_01800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_16195 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_18520 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D K3557_18530 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D K3557_12435 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D K3557_06050 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D K3557_02985 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05915 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05925 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_07590 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13885 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13990 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_04320 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D K3557_03575 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D K3557_07070 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D K3557_11505 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D K3557_11165 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:leim00260]
D K3557_10425 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D K3557_20250 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D K3557_12495 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D K3557_03375 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D K3557_04030 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D K3557_13450 threonine aldolase family protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D K3557_13455 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D K3557_13465 threonine aldolase family protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D K3557_15150 ltaE; (GenBank) low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D K3557_10105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D K3557_04665 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D K3557_01000 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D K3557_03000 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D K3557_20075 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D K3557_17955 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D K3557_17960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D K3557_17965 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D K3557_17935 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D K3557_17940 tdh; (GenBank) L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D K3557_10820 hemA; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D K3557_02380 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D K3557_00505 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D K3557_02390 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_02385 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D K3557_02990 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D K3557_16185 aminopeptidase P family protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D K3557_16170 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D K3557_05405 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D K3557_05400 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D K3557_00545 trimethylamine methyltransferase family protein K25220 mtgB; glycine betaine---corrinoid protein Co-methyltransferase [EC:2.1.1.376]
D K3557_00845 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_02340 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_02450 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_07235 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_13085 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_13800 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_19770 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_07335 sarcosine oxidase subunit alpha family protein K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D K3557_07325 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D K3557_07340 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D K3557_07330 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D K3557_04770 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D K3557_02655 eutB; (GenBank) hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D K3557_15445 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D K3557_18025 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D K3557_18890 ilvA; (GenBank) threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D K3557_13440 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D K3557_17240 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D K3557_02175 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D K3557_02150 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D K3557_02665 doeA; (GenBank) ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D K3557_02670 doeB; (GenBank) N(2)-acetyl-L-2,4-diaminobutanoate deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]
D K3557_02685 aspartate aminotransferase family protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
D K3557_02680 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
C 00270 Cysteine and methionine metabolism [PATH:leim00270]
D K3557_07835 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D K3557_00345 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D K3557_07205 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D K3557_07840 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D K3557_01310 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D K3557_01670 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D K3557_17120 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D K3557_07045 bmt; (GenBank) betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D K3557_08390 methyltetrahydrofolate cobalamin methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D K3557_00745 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D K3557_09280 speD; (GenBank) adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D K3557_09285 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D K3557_15705 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D K3557_14130 autoinducer synthase K20249 raiI; acyl homoserine lactone synthase [EC:2.3.1.184]
D K3557_03420 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D K3557_04240 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D K3557_08475 mtnA; (GenBank) S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D K3557_19755 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D K3557_06770 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_10660 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_11925 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_18625 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D K3557_10425 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D K3557_20250 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D K3557_12495 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D K3557_09230 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D K3557_12160 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D K3557_05145 metZ; (GenBank) O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D K3557_14055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18375 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18860 D-amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_14670 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D K3557_00935 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16045 sseA; (GenBank) 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D K3557_17240 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D K3557_15745 D-cysteine desulfhydrase family protein K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D K3557_14290 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D K3557_03770 Ldh family oxidoreductase K16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338]
D K3557_04770 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D K3557_17955 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D K3557_17960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:leim00280]
D K3557_14055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18375 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18860 D-amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_10885 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D K3557_19385 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_10395 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D K3557_18440 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D K3557_11475 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D K3557_05490 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D K3557_05450 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D K3557_04360 mce; (GenBank) methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D K3557_05510 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D K3557_07980 mmsB; (GenBank) 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D K3557_12460 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D K3557_08045 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_11445 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D K3557_11450 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D K3557_11435 crotonase/enoyl-CoA hydratase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D K3557_11440 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D K3557_03325 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D K3557_03320 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_09060
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:leim00290]
D K3557_02655 eutB; (GenBank) hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D K3557_15445 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D K3557_18025 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D K3557_18890 ilvA; (GenBank) threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D K3557_16265 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D K3557_16275 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D K3557_16290 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D K3557_02245 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_09840 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_10740 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_10745 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D K3557_03525 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D K3557_16075 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D K3557_14055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18375 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18860 D-amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_10885 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D K3557_01040 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D K3557_08555 cimA; (GenBank) citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:leim00300]
D K3557_12495 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D K3557_10425 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D K3557_20250 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D K3557_15820 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D K3557_17865 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D K3557_18035 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D K3557_04500 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D K3557_18070 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D K3557_19330 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D K3557_14380 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D K3557_17715 saccharopine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D K3557_11855 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D K3557_11850 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:leim00310]
D K3557_17715 saccharopine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D K3557_14325 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_08580 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17240 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D K3557_01800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_16195 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_15700 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D K3557_01915 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:leim00220]
D K3557_04505 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D K3557_18880 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D K3557_14390 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D K3557_08505 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D K3557_05155 urea amidolyase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D K3557_07070 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D K3557_02985 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05915 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05925 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_07590 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13885 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13990 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_04320 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D K3557_03575 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D K3557_12435 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_19055 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D K3557_16520 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D K3557_08150 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D K3557_04500 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D K3557_11575 argE; (GenBank) acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:leim00330]
D K3557_05695 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D K3557_16185 aminopeptidase P family protein K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D K3557_06400 speB; (GenBank) agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D K3557_13185 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D K3557_13220 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D K3557_13225 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D K3557_13175 aguB; (GenBank) N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D K3557_05995 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D K3557_14175 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D K3557_09285 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D K3557_15705 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D K3557_09280 speD; (GenBank) adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D K3557_18130 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_02250 pyridoxal phosphate-dependent aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D K3557_06405 speB; (GenBank) agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D K3557_10095 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_12135 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_05910 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D K3557_13960 aldehyde dehydrogenase family protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D K3557_08505 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D K3557_00245 NAD(P)-binding domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D K3557_04275 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D K3557_13445 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D K3557_06050 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D K3557_08515 ornithine cyclodeaminase K01750 ocd; ornithine cyclodeaminase [EC:4.3.1.12]
D K3557_08355 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D K3557_08350 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D K3557_19005 pip; (GenBank) prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_01915 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D K3557_12330 proline racemase family protein K01777 prdF; proline racemase [EC:5.1.1.4]
D K3557_13825 mandelate racemase/muconate lactonizing enzyme family protein K21624 c3lhypd; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171]
D K3557_13835 mandelate racemase K21624 c3lhypd; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171]
D K3557_00510
C 00340 Histidine metabolism [PATH:leim00340]
D K3557_12970 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D K3557_12975 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D K3557_12015 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D K3557_09320 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D K3557_07715 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D K3557_11990 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D K3557_11965 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D K3557_12010 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D K3557_11960 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D K3557_03855 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_04675 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_06550 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D K3557_18040 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:leim00350]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_03855 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_04675 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_12175 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D K3557_17350 hmgA; (GenBank) homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D K3557_17380 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D K3557_17355 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D K3557_05650 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D K3557_20280 aspartate aminotransferase family protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D K3557_02535 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D K3557_01850 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D K3557_20270 hpaH; (GenBank) 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D K3557_20265 HpcH/HpaI aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D K3557_01800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_16195 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_19395 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D K3557_13845 Ldh family oxidoreductase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:leim00360]
D K3557_05650 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D K3557_20280 aspartate aminotransferase family protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D K3557_00885 paaF; (GenBank) phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D K3557_00880 paaI; (GenBank) hydroxyphenylacetyl-CoA thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D K3557_14025 paaA; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D K3557_14050 phenylacetate-CoA oxygenase subunit PaaI K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D K3557_14030 paaB; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D K3557_14035 paaC; (GenBank) phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D K3557_14040 paaJ; (GenBank) phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D K3557_14045 2Fe-2S iron-sulfur cluster binding domain-containing protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D K3557_00875 paaG; (GenBank) 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D K3557_08180 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D K3557_00870 paaZ; (GenBank) phenylacetic acid degradation bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D K3557_16915 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_03855 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_04675 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_12175 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D K3557_01915 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D K3557_13845 Ldh family oxidoreductase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D K3557_03815 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D K3557_10095 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_12135 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_10145 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D K3557_15975 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D K3557_17365 FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D K3557_12855
C 00380 Tryptophan metabolism [PATH:leim00380]
D K3557_11645 kynA; (GenBank) tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D K3557_11640 kynU; (GenBank) kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D K3557_14325 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_08580 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_05650 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D K3557_20280 aspartate aminotransferase family protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_04730 nthA; (GenBank) nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D K3557_04735 nthB; (GenBank) nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D K3557_10095 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_12135 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_13410 catalase K03781 katE; catalase [EC:1.11.1.6]
D K3557_13430 catalase K03781 katE; catalase [EC:1.11.1.6]
D K3557_03815 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:leim00400]
D K3557_08645 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D K3557_16595 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D K3557_07270 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D K3557_08310 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D K3557_18760 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D K3557_07265 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D K3557_00760 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D K3557_19265 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D K3557_08245 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D K3557_08235 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D K3557_08230 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D K3557_02145 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D K3557_08220 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D K3557_02175 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D K3557_02150 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D K3557_17280 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D K3557_03860 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D K3557_15075 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_03855 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_04675 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:leim00410]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19910 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D K3557_09575 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D K3557_09570 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D K3557_09555 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D K3557_09560 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D K3557_13245 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D K3557_17700 hydantoinase/carbamoylase family amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_08045 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:leim00430]
D K3557_13100 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D K3557_19735 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D K3557_15765 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D K3557_15230 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D K3557_02455 thiamine pyrophosphate-binding protein K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D K3557_15780 xsc; (GenBank) sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D K3557_15790 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D K3557_03715 AMP-binding protein K26005 sauT; sulfoacetate-CoA ligase [EC:6.2.1.-]
D K3557_03720 aldehyde dehydrogenase family protein K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81]
C 00440 Phosphonate and phosphinate metabolism [PATH:leim00440]
D K3557_15620 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D K3557_15630 phnG; (GenBank) phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D K3557_15625 phnH; (GenBank) phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D K3557_15605 phnL; (GenBank) phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D K3557_04135 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D K3557_15590 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D K3557_15615 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D K3557_12825 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:leim00450]
D K3557_01310 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D K3557_01670 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D K3557_17120 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D K3557_07045 bmt; (GenBank) betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D K3557_08390 methyltetrahydrofolate cobalamin methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D K3557_08750 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D K3557_04220 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D K3557_04200 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D K3557_09910 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D K3557_12660 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:leim00460]
D K3557_13100 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D K3557_19735 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D K3557_10105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:leim00470]
D K3557_11110 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D K3557_01915 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D K3557_11790 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D K3557_17240 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D K3557_07070 purQ; (GenBank) phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D K3557_08145 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D K3557_11840 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D K3557_01905 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D K3557_01910 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D K3557_13440 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D K3557_15745 D-cysteine desulfhydrase family protein K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D K3557_19330 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D K3557_14380 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D K3557_13055 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D K3557_01410 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12]
D K3557_12330 proline racemase family protein K01777 prdF; proline racemase [EC:5.1.1.4]
D K3557_12855
C 00480 Glutathione metabolism [PATH:leim00480]
D K3557_13100 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D K3557_19735 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D K3557_03875 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D K3557_01565 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D K3557_05150 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D K3557_01555 allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D K3557_01560 urea amidolyase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D K3557_14670 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D K3557_00935 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D K3557_06475 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D K3557_20225 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D K3557_11685 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D K3557_00625 gstA; (GenBank) glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_00950 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_01275 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_04775 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_05540 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_10000 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_17710 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_18510 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_19620 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_04790 gor; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D K3557_13115 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D K3557_08905 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D K3557_15730 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D K3557_15980 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D K3557_05995 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D K3557_14175 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D K3557_09285 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D K3557_15705 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:leim00520]
D K3557_06320 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D K3557_18665 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D K3557_18670 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D K3557_11500 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D K3557_11795 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D K3557_06210 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D K3557_03510 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D K3557_11505 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D K3557_08895 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D K3557_02945 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D K3557_04440 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D K3557_19115 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D K3557_19120 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D K3557_16930 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00541 Biosynthesis of various nucleotide sugars [PATH:leim00541]
D K3557_11500 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D K3557_19170 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D K3557_04445 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D K3557_19110 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D K3557_19115 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:leim00540]
D K3557_09365 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D K3557_11770 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D K3557_08710 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D K3557_09360 lpxI; (GenBank) UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D K3557_09355 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D K3557_19555 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D K3557_11530 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D K3557_19560 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D K3557_07515 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D K3557_02170 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:leim00550]
D K3557_11795 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D K3557_11810 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D K3557_11840 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D K3557_11855 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D K3557_11790 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D K3557_11850 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D K3557_09400 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D K3557_18535 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D K3557_11845 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D K3557_11815 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D K3557_18515 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_10780 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D K3557_20005 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D K3557_11820 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_01005 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_01010 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D K3557_11860 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D K3557_12805 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D K3557_01185 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:leim00552]
D K3557_18535 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:leim00543]
D K3557_07835 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:leim00730]
D K3557_12130 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D K3557_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D K3557_12105 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D K3557_15840 FAD-binding oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D K3557_18405 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D K3557_12115 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D K3557_08950 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D K3557_12120 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D K3557_10895 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D K3557_18165 aminoglycoside phosphotransferase family protein K07251 thiK; thiamine kinase [EC:2.7.1.89]
D K3557_04760 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D K3557_09495 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D K3557_16625 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D K3557_12100
C 00740 Riboflavin metabolism [PATH:leim00740]
D K3557_19660 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D K3557_12325 ribB; (GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D K3557_12355 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D K3557_12320 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D K3557_19285 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D K3557_12335 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D K3557_04040 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D K3557_17290 bluB; (GenBank) 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D K3557_07200 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:leim00750]
D K3557_08270 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D K3557_17960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D K3557_06450 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D K3557_17035 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D K3557_03375 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:leim00760]
D K3557_15660 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D K3557_15655 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D K3557_15665 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D K3557_19865 pncB; (GenBank) nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D K3557_14165 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D K3557_12995 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D K3557_09940 5'-nucleotidase/apyrase family protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D K3557_11185 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D K3557_16430 NUDIX domain-containing protein K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D K3557_01175 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D K3557_06390 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D K3557_15090 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D K3557_01060 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D K3557_09135 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D K3557_19855 pncA; (GenBank) bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D K3557_16425 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D K3557_04560 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D K3557_10100 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D K3557_20170 sthA; (GenBank) Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D K3557_11615 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D K3557_11610 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D K3557_00795 aspartate/glutamate racemase family protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D K3557_02650 eutA; (GenBank) ectoine utilization protein EutA K01799 nicE; maleate isomerase [EC:5.2.1.1]
D K3557_16375 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D K3557_01800 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D K3557_16195 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:leim00770]
D K3557_02245 5-guanidino-2-oxopentanoate decarboxylase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_09840 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_10740 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D K3557_10745 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D K3557_03525 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D K3557_16075 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D K3557_00125 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D K3557_19905 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D K3557_19910 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D K3557_11320 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D K3557_00975 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D K3557_06390 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D K3557_08060 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D K3557_18755 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D K3557_17025 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D K3557_14055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18375 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18860 D-amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_09575 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D K3557_09570 preA; (GenBank) NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D K3557_09555 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D K3557_09560 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D K3557_13245 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D K3557_17700 hydantoinase/carbamoylase family amidase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:leim00780]
D K3557_12070 bioC; (GenBank) malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D K3557_15420 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D K3557_07730 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D K3557_07705 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_11265 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_19945 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_09370 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D K3557_08265 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D K3557_15425 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D K3557_12075 DUF452 family protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D K3557_12090 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D K3557_12080 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D K3557_12085 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D K3557_12095 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D K3557_11325 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:leim00785]
D K3557_03615 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D K3557_02405 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D K3557_09170 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07860 pdhA; (GenBank) pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D K3557_07850 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D K3557_07845 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D K3557_14320 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D K3557_14325 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D K3557_19385 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D K3557_02380 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D K3557_00505 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D K3557_02390 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D K3557_02385 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D K3557_02990 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:leim00790]
D K3557_10440 folE2; (GenBank) GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D K3557_02995 NUDIX domain-containing protein K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D K3557_03500 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D K3557_17055 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D K3557_03505 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D K3557_05790 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D K3557_20125 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D K3557_19660 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D K3557_12325 ribB; (GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D K3557_04325 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D K3557_04330 aminotransferase class IV family protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D K3557_10495 queD; (GenBank) 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D K3557_15985 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D K3557_10500 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D K3557_10490 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D K3557_10505 queF; (GenBank) preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D K3557_11525 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D K3557_08215 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D K3557_14705 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D K3557_14595 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D K3557_08210 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D K3557_14505 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D K3557_14515 mobA; (GenBank) molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D K3557_07230
D K3557_11045
C 00670 One carbon pool by folate [PATH:leim00670]
D K3557_05790 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D K3557_03205 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D K3557_03215 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D K3557_10105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D K3557_07005 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D K3557_17845 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D K3557_00505 aminomethyltransferase family protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D K3557_02390 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D K3557_07045 bmt; (GenBank) betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D K3557_08390 methyltetrahydrofolate cobalamin methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D K3557_05755 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D K3557_06020 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D K3557_08395 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D K3557_05320 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D K3557_00745 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D K3557_18625 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D K3557_00845 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_02340 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_02450 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_07235 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_13085 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_13800 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_19770 FAD-dependent oxidoreductase K00315 DMGDH; dimethylglycine dehydrogenase [EC:1.5.8.4]
D K3557_02380 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_02385 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D K3557_02990 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D K3557_05405 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D K3557_05400 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:leim00860]
D K3557_10820 hemA; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D K3557_01080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_08195 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_02440 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D K3557_13840 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D K3557_09050 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D K3557_14795 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D K3557_18590 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D K3557_14790 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D K3557_14865 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D K3557_15040 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D K3557_19190 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D K3557_18770 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D K3557_18970 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D K3557_14845 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D K3557_10980 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D K3557_12785 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D K3557_03350 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D K3557_08940 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D K3557_12750 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D K3557_12740 cobG; (GenBank) precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D K3557_12755 cobJ; (GenBank) precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D K3557_12775 cobM; (GenBank) precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D K3557_12770 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D K3557_12790 cobF; (GenBank) precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D K3557_12760 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D K3557_12765 cbiE; (GenBank) precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D K3557_12745 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D K3557_12780 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D K3557_12735 cobN; (GenBank) cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D K3557_11730 cobS; (GenBank) cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D K3557_11735 cobT; (GenBank) cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D K3557_16895 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D K3557_12720 cobO; (GenBank) cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D K3557_04625 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D K3557_17145 cbiB; (GenBank) adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D K3557_17140 pyridoxal phosphate-dependent class II aminotransferase K02225 cobC1; cobalamin biosynthesis protein CobC
D K3557_00960 cobU; (GenBank) bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D K3557_12200 cobS; (GenBank) adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D K3557_12195 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D K3557_00955 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D K3557_01215 pyridoxamine 5-phosphate oxidase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D K3557_12690 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:leim00130]
D K3557_19415 acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D K3557_14690 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D K3557_19000 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D K3557_03550 UbiH/UbiF family hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D K3557_19695 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D K3557_17905 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D K3557_12175 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:leim00900]
D K3557_18405 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D K3557_09390 dxr; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D K3557_09125 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D K3557_14470 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D K3557_10810 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D K3557_17065 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19925 idi; (GenBank) isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D K3557_18400 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D K3557_14465 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D K3557_09400 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:leim00906]
D K3557_08550 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:leim00907]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_11440 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D K3557_08085 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D K3557_03210 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:leim00311]
D K3557_09065 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D K3557_00610 bla; (GenBank) class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:leim00332]
D K3557_08355 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D K3557_08350 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:leim00261]
D K3557_13290 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
D K3557_04200 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D K3557_10425 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D K3557_20250 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D K3557_15820 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D K3557_17865 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:leim00521]
D K3557_02945 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D K3557_04440 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D K3557_06035 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D K3557_19565 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D K3557_02945 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:leim00401]
D K3557_03860 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_03855 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_04675 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:leim00405]
D K3557_19920 flavin-dependent oxidoreductase K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D K3557_08245 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D K3557_08235 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D K3557_07700 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D K3557_19380 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D K3557_07705 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_11265 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_19945 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_08265 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D K3557_15425 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D K3557_07710 acyl carrier protein K02078 acpP; acyl carrier protein
D K3557_08705 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:leim00999]
D K3557_00745 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D K3557_18760 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites [PATH:leim00997]
D K3557_01410 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12]
D K3557_13310 acetyltransferase K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:leim00362]
D K3557_12850 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D K3557_13630 alpha/beta hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D K3557_15455 pcaD; (GenBank) 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D K3557_14020 pcaF; (GenBank) 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D K3557_01980 3-keto-5-aminohexanoate cleavage protein K27848 E2.3.1.318; 3-oxoadipate:acetyl-CoA acetyltransferase [EC:2.3.1.318]
D K3557_02550 3-keto-5-aminohexanoate cleavage protein K27848 E2.3.1.318; 3-oxoadipate:acetyl-CoA acetyltransferase [EC:2.3.1.318]
D K3557_00635 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D K3557_01985 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D K3557_02020 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D K3557_02555 pcaG; (GenBank) protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D K3557_02560 pcaH; (GenBank) protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D K3557_15465 adenylosuccinate lyase family protein K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D K3557_02565 pcaC; (GenBank) 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D K3557_11355 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D K3557_13780 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D K3557_15975 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D K3557_04835 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S
D K3557_14770 pobA; (GenBank) 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D K3557_19415 acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D K3557_00415 acyl-CoA dehydrogenase family protein K04118 pimC; pimeloyl-CoA dehydrogenase large subunit [EC:1.3.1.62]
D K3557_00420 acyl-CoA dehydrogenase family protein K28556 pimD; pimeloyl-CoA dehydrogenase small subunit [EC:1.3.1.62]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D K3557_00405 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D K3557_13950 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D K3557_08580 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D K3557_16915 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:leim00627]
D K3557_04730 nthA; (GenBank) nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D K3557_04735 nthB; (GenBank) nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D K3557_10095 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_12135 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_07040 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D K3557_10390 AMP-binding protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D K3557_10415 bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
C 00364 Fluorobenzoate degradation [PATH:leim00364]
D K3557_12850 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D K3557_04730 nthA; (GenBank) nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D K3557_04735 nthB; (GenBank) nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D K3557_02020 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:leim00625]
D K3557_01850 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D K3557_02535 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D K3557_17745 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_17800 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_19870 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D K3557_15435 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D K3557_01790
D K3557_20155
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:leim00361]
D K3557_02020 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D K3557_01985 intradiol ring-cleavage dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D K3557_01990 FAD-dependent monooxygenase K10676 tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20]
D K3557_12850 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D K3557_15435 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D K3557_01790
D K3557_20155
C 00623 Toluene degradation [PATH:leim00623]
D K3557_12850 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D K3557_02020 maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation
D K3557_00635 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:leim00643]
D K3557_17350 hmgA; (GenBank) homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D K3557_17380 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D K3557_17355 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D K3557_04730 nthA; (GenBank) nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84]
D K3557_04735 nthB; (GenBank) nitrile hydratase subunit beta K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84]
D K3557_10095 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_12135 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D K3557_02710 malonate decarboxylase subunit alpha K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
D K3557_05155 urea amidolyase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
C 00930 Caprolactam degradation [PATH:leim00930]
D K3557_19535 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D K3557_10015 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D K3557_00635 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:leim00626]
D K3557_01850 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D K3557_02535 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D K3557_02555 pcaG; (GenBank) protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D K3557_02560 pcaH; (GenBank) protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:leim00984]
D K3557_14780 CoA transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:leim03020]
D K3557_16810 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D K3557_16805 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D K3557_16610 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D K3557_17050 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:leim03010]
D K3557_00250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_01570 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_13775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_17550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_00265 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_01585 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_13760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_17535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_00270 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_01590 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_13755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_17530 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_02075 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D K3557_08325 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D K3557_16725 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D K3557_03830 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D K3557_16655 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D K3557_07675 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D K3557_16785 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D K3557_16670 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D K3557_09260 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D K3557_16765 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D K3557_16615 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D K3557_16790 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D K3557_16620 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D K3557_16675 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D K3557_17740 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D K3557_17285 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D K3557_16695 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D K3557_07670 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D K3557_16735 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D K3557_17890 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D K3557_15210 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D K3557_16830 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D K3557_16740 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D K3557_16760 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D K3557_16755 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D K3557_16680 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D K3557_16665 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D K3557_07665 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D K3557_16820 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D K3557_16835 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D K3557_16815 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D K3557_09265 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D K3557_16690 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D K3557_16635 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D K3557_16720 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D K3557_16605 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D K3557_16660 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D K3557_17320 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D K3557_01955 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D K3557_08375 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D K3557_16730 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D K3557_16750 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D K3557_16685 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D K3557_02185 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D K3557_08370 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D K3557_04545 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D K3557_16700 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D K3557_16650 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D K3557_17325 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D K3557_06270 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D K3557_05250 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D K3557_16465 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D K3557_01950 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D K3557_17615 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:leim00970]
D K3557_00260 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_01580 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_01820 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_13765 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_17540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_01155 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D K3557_08725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D K3557_16445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D K3557_19435 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D K3557_06565 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D K3557_06590 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D K3557_10845 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D K3557_10850 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D K3557_10855 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D K3557_10380 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D K3557_02705 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D K3557_12510 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D K3557_12515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D K3557_08880 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_10370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_11920 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_11940 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_11945 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_12290 tRNA-His K14226 tRNA-His; tRNA His
D K3557_00255 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D K3557_01575 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D K3557_13770 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D K3557_17545 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D K3557_03630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_06065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_07610 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_08485 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_18550 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_18575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_19185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_19335 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D K3557_00275 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_00860 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_01595 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_06985 tRNA-Ile K14230 tRNA-Met; tRNA Met
D K3557_13750 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_17525 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_06245 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D K3557_08285 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D K3557_16295 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D K3557_02215 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D K3557_07220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D K3557_08385 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D K3557_12795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D K3557_12140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D K3557_18570 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D K3557_16855 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D K3557_12035 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D K3557_10860 tRNA-Val K14237 tRNA-Val; tRNA Val
D K3557_10870 tRNA-Val K14237 tRNA-Val; tRNA Val
D K3557_17610 tRNA-Val K14237 tRNA-Val; tRNA Val
D K3557_01080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_08195 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_10245 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D K3557_19700 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D K3557_11705 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D K3557_10250 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D K3557_08840 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D K3557_04335 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D K3557_03470 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D K3557_03485 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D K3557_05830 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D K3557_07430 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D K3557_08560 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D K3557_12660 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D K3557_17105 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D K3557_05970 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D K3557_19635 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D K3557_03040 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D K3557_01200 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D K3557_06200 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D K3557_05585 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D K3557_12980 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D K3557_15285 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D K3557_15275 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D K3557_06315 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D K3557_00900 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D K3557_17015 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:leim03060]
D K3557_16630 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D K3557_16845 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D K3557_04725 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D K3557_07440 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D K3557_07445 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D K3557_07435 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D K3557_16490 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D K3557_19065 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D K3557_18745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D K3557_17260 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D K3557_04875 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D K3557_11230 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D K3557_11225 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D K3557_11220 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D K3557_17020 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D K3557_17840 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:leim04122]
D K3557_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D K3557_16045 sseA; (GenBank) 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D K3557_07090 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D K3557_09350 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D K3557_14705 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D K3557_11525 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D K3557_14710 moaD; (GenBank) molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D K3557_08215 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D K3557_14595 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D K3557_12110 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:leim03018]
D K3557_15895 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D K3557_07085 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D K3557_06360 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D K3557_17820 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D K3557_06345 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D K3557_18085 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D K3557_17330 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D K3557_19985 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D K3557_18775 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D K3557_11315 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D K3557_19090 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D K3557_04110 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D K3557_09075 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D K3557_09240 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D K3557_15220 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D K3557_18920 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:leim03030]
D K3557_09520 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_18750 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_13000 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D K3557_15125 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D K3557_12815 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D K3557_19625 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D K3557_06480 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D K3557_19790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D K3557_06775 AAA family ATPase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D K3557_11105 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D K3557_12405 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D K3557_09460 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D K3557_17080 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D K3557_19520 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D K3557_20045 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D K3557_09335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:leim03410]
D K3557_15870 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D K3557_08225 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D K3557_19540 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D K3557_17900 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D K3557_08540 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D K3557_10260 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D K3557_14610 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D K3557_06155 xth; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D K3557_19670 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D K3557_20045 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D K3557_12505 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D K3557_09335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:leim03420]
D K3557_09040 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D K3557_07955 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D K3557_01265 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D K3557_14725 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D K3557_11895 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D K3557_16435 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D K3557_20045 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D K3557_09335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:leim03430]
D K3557_18835 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D K3557_17755 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D K3557_11895 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D K3557_16435 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D K3557_04860 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D K3557_18395 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D K3557_12505 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D K3557_09460 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D K3557_13000 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D K3557_19790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D K3557_15125 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D K3557_19625 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D K3557_12815 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D K3557_09520 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_18750 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_06480 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D K3557_09335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:leim03440]
D K3557_12505 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D K3557_09460 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D K3557_19795 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D K3557_16995 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D K3557_15145 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D K3557_08845 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D K3557_20045 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D K3557_03135 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D K3557_03140 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D K3557_03130 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D K3557_09330 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D K3557_13000 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D K3557_19790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D K3557_15125 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D K3557_19625 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D K3557_12815 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D K3557_09520 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_18750 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_06480 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D K3557_03100 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:leim02010]
D K3557_15640 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D K3557_15650 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D K3557_15645 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D K3557_14815 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D K3557_14820 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D K3557_14825 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D K3557_01480 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D K3557_02325 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D K3557_02335 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein
D K3557_02330 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D K3557_14255 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D K3557_17620 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D K3557_17630 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D K3557_11250 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D K3557_19270 thiB; (GenBank) thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D K3557_19275 thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D K3557_19280 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D K3557_00520 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D K3557_00565 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D K3557_02355 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D K3557_00530 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D K3557_00575 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D K3557_02370 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D K3557_00535 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D K3557_00580 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D K3557_02365 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D K3557_00525 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D K3557_00570 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D K3557_02360 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D K3557_18140 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D K3557_18155 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D K3557_18150 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D K3557_18145 ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D K3557_03690 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D K3557_12060 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D K3557_12065 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D K3557_03680 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D K3557_12050 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D K3557_03685 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D K3557_12055 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D K3557_05220 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D K3557_16020 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D K3557_09735 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D K3557_11115 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D K3557_11120 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D K3557_13040 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D K3557_14085 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D K3557_13025 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D K3557_14100 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D K3557_13035 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D K3557_14105 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D K3557_13020 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D K3557_14095 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D K3557_02830 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D K3557_02815 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D K3557_02810 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D K3557_02825 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D K3557_02820 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D K3557_08615 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D K3557_19075 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D K3557_08610 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D K3557_08605 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D K3557_08600 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D K3557_13935 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D K3557_13925 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D K3557_13930 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D K3557_13940 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D K3557_13540 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D K3557_16560 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D K3557_13535 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D K3557_16555 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D K3557_13530 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D K3557_16550 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D K3557_13525 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D K3557_16545 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D K3557_02015 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_08660 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_09680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_17645 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_02000 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_08680 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_09685 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_17665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_01995 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_08685 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_17650 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_02010 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_08665 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_09695 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_17670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_02005 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_08670 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_09700 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_17640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_15060 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D K3557_15055 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D K3557_15050 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D K3557_15045 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D K3557_13255 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D K3557_15370 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D K3557_13260 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D K3557_13265 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D K3557_13270 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D K3557_00815 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D K3557_00825 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein
D K3557_00830 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D K3557_00820 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D K3557_17405 cbiM; (GenBank) cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D K3557_17395 cbiQ; (GenBank) cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D K3557_17390 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D K3557_17410 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D K3557_17400 cobalt ABC transporter permease K16915 cbiL; nickel transport protein
D K3557_04450 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D K3557_04455 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D K3557_05600 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D K3557_05605 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D K3557_07475 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D K3557_07470 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D K3557_07465 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D K3557_07460 ccmA; (GenBank) heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D K3557_06470 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D K3557_06465 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D K3557_19155 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D K3557_02305 ABC transporter permease K19341 nosY; Cu-processing system permease protein
D K3557_02300 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D K3557_14360 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D K3557_14365 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D K3557_04660 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D K3557_07375 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D K3557_18925 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D K3557_02505 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D K3557_16010 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS) [PATH:leim02060]
D K3557_16925 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D K3557_16930 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D K3557_10420 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D K3557_19145 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:leim03070]
D K3557_04615 TolC family outer membrane protein K12340 tolC; outer membrane protein
D K3557_07440 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D K3557_07445 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D K3557_16845 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D K3557_04725 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D K3557_16630 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D K3557_07435 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D K3557_16490 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D K3557_19065 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D K3557_04875 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D K3557_18745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D K3557_17260 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D K3557_11230 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D K3557_11225 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D K3557_11220 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:leim02020]
D K3557_08620 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D K3557_08590 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D K3557_08615 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D K3557_19075 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D K3557_06600 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D K3557_18385 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D K3557_04810 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D K3557_00390 copper-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D K3557_00395 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D K3557_18190 flagellin K02406 fliC; flagellin
D K3557_18840 flagellin K02406 fliC; flagellin
D K3557_18285 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D K3557_14250 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D K3557_14245 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D K3557_03735 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D K3557_13965 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D K3557_14230 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D K3557_13970 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D K3557_14235 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D K3557_03725 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D K3557_13975 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D K3557_14240 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D K3557_08940 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D K3557_17885 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D K3557_07050 phosphatidylglycerol lysyltransferase domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D K3557_16945 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D K3557_16950 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D K3557_06530 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D K3557_10710 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D K3557_07615 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D K3557_10605 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D K3557_07420 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D K3557_08040 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D K3557_03290 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_03295 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_03300 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_03285 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D K3557_03280 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D K3557_03270 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D K3557_03265 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D K3557_03260 type II secretion system F family protein K12510 tadB; tight adherence protein B
D K3557_03255 type II secretion system F family protein K12511 tadC; tight adherence protein C
D K3557_00915 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D K3557_07595 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D K3557_09115 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D K3557_09110 sigma-54 dependent transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D K3557_02985 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05915 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05925 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_07590 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13885 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13990 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_09105 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D K3557_09100 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_07075 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D K3557_10965 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D K3557_10960 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D K3557_01550 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_02490 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_02590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_04060 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_07275 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_07380 nitrate- and nitrite sensing domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_13120 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_16600 CHASE3 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_12545 diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D K3557_08855 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D K3557_08345 histidine phosphotransferase K13588 chpT; histidine phosphotransferase ChpT
D K3557_09340 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D K3557_00445 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_01745 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_01765 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_02630 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_05175 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_09485 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_10700 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_10955 DctP family TRAP transporter solute-binding subunit K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_12860 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_13880 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_19400 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_19605 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_00450 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_01750 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_01770 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_02635 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_05170 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_09480 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_10950 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_12865 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_13870 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D K3557_19405 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_19455 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_19600 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D K3557_00455 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_01755 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_01775 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_02640 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_05165 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_09475 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_10945 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_12870 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_13875 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_19410 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_19450 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_19595 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_04820 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D K3557_16175 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D K3557_18650 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D K3557_18640 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D K3557_19300 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D K3557_19305 petB; (GenBank) cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D K3557_19310 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D K3557_13335 cytochrome c family protein K08738 CYC; cytochrome c
D K3557_15070 c-type cytochrome K08738 CYC; cytochrome c
D K3557_19930 cytochrome C K08738 CYC; cytochrome c
D K3557_13390 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D K3557_15015 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D K3557_13385 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D K3557_15010 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D K3557_13380 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D K3557_15005 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D K3557_13375 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D K3557_15000 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D K3557_04615 TolC family outer membrane protein K12340 tolC; outer membrane protein
D K3557_12345 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D K3557_04565 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D K3557_00410 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:leim04146]
D K3557_14780 CoA transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D K3557_09705 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_13555 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_17680 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_15090 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D K3557_04665 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D K3557_13115 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D K3557_11440 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D K3557_13410 catalase K03781 katE; catalase [EC:1.11.1.6]
D K3557_13430 catalase K03781 katE; catalase [EC:1.11.1.6]
D K3557_07355 superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:leim04148]
D K3557_08505 rocF; (GenBank) arginase K01476 rocF; arginase [EC:3.5.3.1]
D K3557_05995 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D K3557_14175 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D K3557_19300 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:leim02024]
D K3557_09075 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D K3557_08245 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D K3557_08235 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D K3557_08645 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D K3557_16595 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D K3557_07615 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D K3557_10605 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D K3557_14130 autoinducer synthase K20249 raiI; acyl homoserine lactone synthase [EC:2.3.1.184]
D K3557_14135 LuxR family transcriptional regulator K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
D K3557_18120 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D K3557_18110 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D K3557_18115 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D K3557_18125 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D K3557_02015 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_08660 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_09680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_17645 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_02000 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_08680 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_09685 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_17665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_01995 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_08685 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_17650 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_02010 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_08665 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_09695 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_17670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_02005 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_08670 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_09700 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_17640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_09705 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_13555 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_17680 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_04820 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D K3557_16175 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D K3557_19660 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D K3557_12355 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D K3557_05620 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D K3557_01615 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_08990 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_09425 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_10315 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_11585 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_13200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_13470 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_13675 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_15530 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_16105 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_16310 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_19010 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_19900 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_01620 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_05780 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_09430 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_10320 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_11590 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_13195 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_13475 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_13680 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_15535 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_16315 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_19890 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_01625 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_05775 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_09435 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_10325 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_11595 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_13190 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_13480 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_13685 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_15540 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_16320 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_19885 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_01630 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_09440 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_10330 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_11580 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_13205 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_13485 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_13690 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_15525 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_16325 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_19880 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_13210 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D K3557_13695 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D K3557_16330 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D K3557_16490 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D K3557_16845 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D K3557_04725 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D K3557_16630 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D K3557_07435 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D K3557_19065 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D K3557_04875 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D K3557_18745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D K3557_17260 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:leim02030]
D K3557_01550 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_02490 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_02590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_04060 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_07275 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_07380 nitrate- and nitrite sensing domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_13120 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_16600 CHASE3 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_07520 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D K3557_18315 FliM/FliN family flagellar motor C-terminal domain-containing protein K02417 fliN; flagellar motor switch protein FliN
D K3557_18285 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D K3557_19205 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D K3557_09655
C 02040 Flagellar assembly [PATH:leim02040]
D K3557_18225 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D K3557_18305 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D K3557_07520 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D K3557_18210 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D K3557_18255 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D K3557_18300 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D K3557_18315 FliM/FliN family flagellar motor C-terminal domain-containing protein K02417 fliN; flagellar motor switch protein FliN
D K3557_18320 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D K3557_18230 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D K3557_18270 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D K3557_18275 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D K3557_18265 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D K3557_18245 flgA; (GenBank) flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D K3557_18215 FlgB family protein K02387 flgB; flagellar basal-body rod protein FlgB
D K3557_18220 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D K3557_18170 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D K3557_19210 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D K3557_18235 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D K3557_18240 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D K3557_18250 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D K3557_19225 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D K3557_18180 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D K3557_19215 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D K3557_19220 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D K3557_18190 flagellin K02406 fliC; flagellin
D K3557_18840 flagellin K02406 fliC; flagellin
D K3557_18285 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D K3557_19205 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D K3557_12400 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D K3557_09655
D K3557_18175
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D K3557_06360 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:leim04981]
D K3557_05320 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D K3557_05790 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D K3557_10105 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D K3557_05755 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D K3557_07045 bmt; (GenBank) betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D K3557_08390 methyltetrahydrofolate cobalamin methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:leim04980]
D K3557_16895 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D K3557_04535 meaB; (GenBank) methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D K3557_05510 scpA; (GenBank) methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D K3557_07045 bmt; (GenBank) betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D K3557_08390 methyltetrahydrofolate cobalamin methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D K3557_06550 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D K3557_16050 leucine-rich repeat domain-containing protein K13730 inlA; internalin A
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:leim01501]
D K3557_19645 porin K08720 ompU; outer membrane protein OmpU
D K3557_06210 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D K3557_00605 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D K3557_02800 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D K3557_00610 bla; (GenBank) class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D K3557_08470 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D K3557_08465 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D K3557_04615 TolC family outer membrane protein K12340 tolC; outer membrane protein
D K3557_10780 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D K3557_01010 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D K3557_11860 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:leim01502]
D K3557_11790 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D K3557_11110 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D K3557_11850 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D K3557_11845 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D K3557_11815 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:leim01503]
D K3557_07890 calcium-binding protein K01406 prtC; serralysin [EC:3.4.24.40]
D K3557_18010 type I secretion protein K01406 prtC; serralysin [EC:3.4.24.40]
D K3557_10790 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D K3557_04810 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D K3557_08470 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D K3557_08465 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D K3557_04615 TolC family outer membrane protein K12340 tolC; outer membrane protein
D K3557_09365 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D K3557_07050 phosphatidylglycerol lysyltransferase domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D K3557_00805
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:leim01000]
C 01001 Protein kinases [BR:leim01001]
D K3557_19740 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D K3557_02870 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D K3557_08620 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D K3557_06600 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D K3557_14250 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D K3557_16945 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D K3557_10705 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D K3557_09115 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D K3557_09105 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D K3557_07075 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D K3557_10965 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D K3557_15355 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D K3557_08855 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D K3557_18650 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:leim01009]
D K3557_18625 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D K3557_00665 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D K3557_17965 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:leim01002]
D K3557_17840 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D K3557_03240 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D K3557_09200 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D K3557_11670 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D K3557_11165 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D K3557_18520 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D K3557_11505 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D K3557_18955 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK
D K3557_08715 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D K3557_20115 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D K3557_11685 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D K3557_00995 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D K3557_12240 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D K3557_07890 calcium-binding protein K01406 prtC; serralysin [EC:3.4.24.40]
D K3557_18010 type I secretion protein K01406 prtC; serralysin [EC:3.4.24.40]
D K3557_17825 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D K3557_17830 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D K3557_06475 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D K3557_20225 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D K3557_03755 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D K3557_18070 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D K3557_15930 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D K3557_11740 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D K3557_08935 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D K3557_03195 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D K3557_09385 rseP; (GenBank) RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D K3557_19965 mepA; (GenBank) penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D K3557_04310 trypsin-like serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-]
D K3557_16210 trypsin-like serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-]
D K3557_16215 trypsin-like serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-]
D K3557_04810 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D K3557_12805 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D K3557_01185 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D K3557_09755 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D K3557_10890 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D K3557_08205 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D K3557_17020 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D K3557_19005 pip; (GenBank) prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D K3557_20085 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D K3557_09065 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D K3557_06045 rhomboid family intramembrane serine protease K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D K3557_07765 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D K3557_18705 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D K3557_13100 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D K3557_19735 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D K3557_19570 TldD/PmbA family protein K03592 pmbA; PmbA protein
D K3557_03340 tldD; (GenBank) metalloprotease TldD K03568 tldD; TldD protein
D K3557_20000 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D K3557_04800 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D K3557_04795 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:leim01003]
D K3557_18515 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_20005 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D K3557_10780 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D K3557_11820 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_01005 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_09865 mdoH; (GenBank) glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:leim01005]
D K3557_09365 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D K3557_09355 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D K3557_11770 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D K3557_08710 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D K3557_09360 lpxI; (GenBank) UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D K3557_19555 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D K3557_07515 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D K3557_11530 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D K3557_19560 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D K3557_02170 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D K3557_04445 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D K3557_19110 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D K3557_19170 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D K3557_11535 glycosyltransferase family 4 protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D K3557_15685 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:leim01011]
D K3557_11795 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D K3557_11810 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D K3557_11840 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D K3557_11855 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D K3557_11790 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D K3557_11110 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D K3557_08145 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D K3557_11845 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D K3557_11815 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D K3557_18535 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D K3557_00910 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D K3557_10780 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D K3557_20005 pbpC; (GenBank) penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D K3557_01010 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D K3557_11860 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D K3557_12805 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D K3557_01185 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D K3557_18515 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_11820 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_01005 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_18955 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK
D K3557_08715 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB
D K3557_19965 mepA; (GenBank) penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D K3557_15825 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D K3557_18730 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D K3557_10720 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D K3557_18105 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D K3557_07735 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D K3557_10790 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D K3557_10235 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:leim01004]
D K3557_07700 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D K3557_19380 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D K3557_06260 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D K3557_15420 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D K3557_07730 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D K3557_07705 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_11265 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_19945 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D K3557_15415 fabA; (GenBank) bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D K3557_09370 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D K3557_08265 fabI; (GenBank) enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D K3557_15425 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D K3557_01110 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D K3557_08295 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D K3557_07420 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D K3557_08040 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D K3557_09490 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_11460 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D K3557_10085 prpE; (GenBank) propionate-CoA ligase PrpE K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D K3557_09705 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_13555 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_17680 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_10360 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D K3557_14145 1-acyl-sn-glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D K3557_06265 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D K3557_14635 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D K3557_14355 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:leim01008]
D K3557_13290 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
C 01006 Prenyltransferases [BR:leim01006]
D K3557_18400 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D K3557_14465 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D K3557_09400 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D K3557_08550 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D K3557_09415 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D K3557_14690 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D K3557_03350 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:leim01007]
D K3557_01200 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D K3557_01080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_08195 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_09315 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D K3557_06315 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D K3557_00900 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D K3557_08560 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D K3557_06200 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D K3557_12660 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D K3557_03040 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D K3557_05970 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D K3557_19635 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D K3557_04335 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D K3557_12980 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D K3557_03470 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D K3557_03485 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D K3557_07430 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D K3557_05585 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D K3557_05830 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D K3557_08840 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D K3557_15285 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D K3557_15275 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D K3557_05720 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D K3557_16040 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D K3557_02250 pyridoxal phosphate-dependent aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84]
D K3557_03855 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_04675 pyridoxal phosphate-dependent aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D K3557_17935 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D K3557_10820 hemA; (GenBank) 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D K3557_12090 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D K3557_01670 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D K3557_17120 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D K3557_04500 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D K3557_18130 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D K3557_12080 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D K3557_15765 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D K3557_02440 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D K3557_13840 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D K3557_01915 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D K3557_14055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18375 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_18860 D-amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D K3557_04665 aminotransferase class V-fold PLP-dependent enzyme K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D K3557_17960 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:leim00199]
C 00194 Photosynthesis proteins [BR:leim00194]
D K3557_03930 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D K3557_03925 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D K3557_03920 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D K3557_03915 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D K3557_03910 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D K3557_17185 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D K3557_17190 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D K3557_17195 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D K3557_17200 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D K3557_17205 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:leim03000]
D K3557_06770 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_10660 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_11925 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_09420 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D K3557_14775 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D K3557_01875 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D K3557_15865 bifunctional helix-turn-helix domain-containing protein/methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D K3557_20090 trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D K3557_00850 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D K3557_08650 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D K3557_19780 helix-turn-helix domain-containing protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D K3557_00095 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_00120 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_02425 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_05985 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_06560 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_08585 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_08735 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_10160 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_10445 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_12465 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_13215 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_14440 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_14925 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_18355 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D K3557_02570 pcaQ; (GenBank) pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D K3557_01720 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D K3557_06025 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D K3557_03820 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D K3557_05360 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D K3557_00605 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D K3557_16335 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D K3557_13070 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D K3557_03695 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D K3557_12710 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D K3557_03740 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D K3557_13905 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D K3557_19425 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D K3557_15635 phnF; (GenBank) phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D K3557_02030 GntR family transcriptional regulator K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D K3557_19610 GntR family transcriptional regulator K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D K3557_17175 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D K3557_01045 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D K3557_15775 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D K3557_05385 betI; (GenBank) transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D K3557_09565 TetR family transcriptional regulator C-terminal domain-containing protein K09017 rutR; TetR/AcrR family transcriptional regulator
D K3557_00035 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_01885 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_06055 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_06235 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_10880 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_15225 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_15510 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_17460 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_02675 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D K3557_03530 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D K3557_03840 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D K3557_10975 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D K3557_07615 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D K3557_10605 autoinducer binding domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D K3557_14135 LuxR family transcriptional regulator K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
D K3557_13415 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D K3557_13435 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D K3557_02545 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D K3557_14485 soxR; (GenBank) redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D K3557_06350 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D K3557_15410 transcriptional repressor K09826 irr; Fur family transcriptional regulator, iron response regulator
D K3557_02980 helix-turn-helix domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D K3557_04820 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D K3557_16175 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D K3557_15035 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D K3557_02735 Crp/Fnr family transcriptional regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D K3557_08795 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D K3557_01095 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D K3557_13370 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D K3557_03660 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D K3557_08995 helix-turn-helix domain-containing protein K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D K3557_09820 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D K3557_15490 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D K3557_05425 short-chain fatty acyl-CoA regulator family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D K3557_09675 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D K3557_16065 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D K3557_01660 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D K3557_02800 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D K3557_11325 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D K3557_10225 GAF domain-containing protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D K3557_06050 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D K3557_02285 NosR/NirI family protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D K3557_11715 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D K3557_00195 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D K3557_10625 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D K3557_18800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D K3557_12205 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D K3557_18825 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D K3557_00865 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D K3557_14570 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D K3557_06145 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D K3557_12360 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D K3557_11875 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:leim03021]
D K3557_16610 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D K3557_16810 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D K3557_16805 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D K3557_17050 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D K3557_12400 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D K3557_12560 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D K3557_00965 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D K3557_12265 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D K3557_19035 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D K3557_12315 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D K3557_16840 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D K3557_18900 fused response regulator/phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D K3557_19745 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D K3557_19740 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D K3557_06145 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D K3557_14495 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D K3557_18775 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:leim03019]
D K3557_07085 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D K3557_17015 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D K3557_11315 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D K3557_18085 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D K3557_06345 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D K3557_17330 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D K3557_19985 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D K3557_06360 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D K3557_17820 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D K3557_18775 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D K3557_19090 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D K3557_04110 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D K3557_09075 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D K3557_09240 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D K3557_15220 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D K3557_18920 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D K3557_15895 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D K3557_16935 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D K3557_04530 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:leim03011]
D K3557_02075 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D K3557_08325 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D K3557_16725 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D K3557_03830 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D K3557_16655 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D K3557_07675 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D K3557_16785 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D K3557_16670 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D K3557_09260 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D K3557_16765 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D K3557_16615 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D K3557_16790 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D K3557_16620 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D K3557_16675 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D K3557_17740 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D K3557_17285 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D K3557_16695 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D K3557_07670 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D K3557_16735 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D K3557_17890 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D K3557_15210 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D K3557_16830 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D K3557_16740 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D K3557_16760 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D K3557_16755 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D K3557_16680 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D K3557_16665 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D K3557_07665 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D K3557_16820 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D K3557_16835 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D K3557_16815 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D K3557_09265 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D K3557_16690 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D K3557_16635 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D K3557_16720 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D K3557_16605 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D K3557_16660 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D K3557_17320 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D K3557_01955 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D K3557_08375 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D K3557_16730 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D K3557_16750 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D K3557_16685 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D K3557_08370 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D K3557_04545 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D K3557_16700 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D K3557_16650 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D K3557_17325 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D K3557_06270 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D K3557_05250 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D K3557_16465 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D K3557_01950 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D K3557_17615 ykgO; (GenBank) type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D K3557_02185 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D K3557_00250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_01570 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_13775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_17550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_00265 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_01585 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_13760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_17535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_00270 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_01590 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_13755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_17530 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:leim03009]
D K3557_17015 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D K3557_17005 era; (GenBank) GTPase Era K03595 era; GTPase
D K3557_08360 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D K3557_06145 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D K3557_19035 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D K3557_12315 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D K3557_16840 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D K3557_06445 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D K3557_08860 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D K3557_17855 methyltransferase domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D K3557_14875 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D K3557_15970 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D K3557_14685 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D K3557_18790 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D K3557_11870 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D K3557_00925 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D K3557_12030 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D K3557_08410 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D K3557_16245 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D K3557_06085 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D K3557_01035 rlmJ; (GenBank) 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D K3557_18005 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D K3557_18935 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D K3557_17780 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D K3557_10280 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D K3557_16575 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D K3557_12270 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D K3557_08525 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D K3557_14080 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D K3557_03385 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D K3557_10905 rimK; (GenBank) 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D K3557_17295 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D K3557_04425 rimO; (GenBank) 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D K3557_03115 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D K3557_07085 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D K3557_07315 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D K3557_17330 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D K3557_10895 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D K3557_07415 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D K3557_09070 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D K3557_14565 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D K3557_17045 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D K3557_17870 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D K3557_19030 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D K3557_16250 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D K3557_00730 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D K3557_19150 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D K3557_02165 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:leim03016]
D K3557_15175 ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D K3557_01080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_08195 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_05585 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D K3557_03040 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D K3557_19635 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D K3557_12660 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D K3557_06200 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D K3557_04335 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D K3557_08840 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D K3557_05830 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D K3557_07430 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D K3557_08560 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D K3557_05970 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D K3557_12980 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D K3557_15285 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D K3557_15275 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D K3557_06315 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D K3557_00900 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D K3557_10310 dtd; (GenBank) D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D K3557_07215 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D K3557_03605 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D K3557_00755 tRNA (guanine(46)-N(7))-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D K3557_03010 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D K3557_17775 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D K3557_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D K3557_14565 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D K3557_09415 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D K3557_18780 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D K3557_18785 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D K3557_09910 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D K3557_19105 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D K3557_16470 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D K3557_18820 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D K3557_07010 rnd; (GenBank) ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D K3557_19175 ribonuclease H-like domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D K3557_03150 thpR; (GenBank) RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D K3557_01250 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D K3557_01200 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D K3557_03470 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D K3557_03485 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D K3557_09315 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D K3557_01245 YbaK/EbsC family protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D K3557_17245 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D K3557_10275 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D K3557_07295 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D K3557_09120 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D K3557_00710 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D K3557_19325 mtaB; (GenBank) tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D K3557_08945 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D K3557_09305 trmFO; (GenBank) methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D K3557_17305 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D K3557_17780 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D K3557_09350 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D K3557_16480 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D K3557_07090 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D K3557_10935 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D K3557_04650 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D K3557_07925 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D K3557_10490 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D K3557_10495 queD; (GenBank) 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D K3557_10500 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D K3557_10505 queF; (GenBank) preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D K3557_18505 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D K3557_09915 mnmH; (GenBank) tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D K3557_10900 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D K3557_03190 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D K3557_14075 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D K3557_18595 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D K3557_18660 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D K3557_18085 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D K3557_17820 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:leim03012]
D K3557_19045 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D K3557_11020 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D K3557_06500 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D K3557_08320 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D K3557_16775 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D K3557_16865 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D K3557_16780 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D K3557_17250 elongation factor G K02355 fusA; elongation factor G
D K3557_06425 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D K3557_09405 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D K3557_06430 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D K3557_02195 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D K3557_04635 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D K3557_10770 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D K3557_11290 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D K3557_01385 peptide chain release factor-like protein K02839 prfH; peptide chain release factor
D K3557_19950 arfB; (GenBank) aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:leim03110]
D K3557_03895 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D K3557_17585 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D K3557_09750 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D K3557_18715 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D K3557_19090 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D K3557_07585 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D K3557_04110 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D K3557_19085 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D K3557_05530 molecular chaperone DjiA K05801 djlA; DnaJ like chaperone protein
D K3557_18910 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D K3557_18830 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D K3557_16205 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D K3557_12215 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D K3557_04105 co-chaperone GroES K04078 groES; chaperonin GroES
D K3557_04810 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D K3557_03195 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D K3557_17200 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D K3557_18745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D K3557_04555 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D K3557_08250 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D K3557_19060 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D K3557_06455 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D K3557_18685 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
D K3557_01130 trxC; (GenBank) thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D K3557_19680 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
D K3557_18985 grxC; (GenBank) glutaredoxin 3 K03676 grxC; glutaredoxin 3
D K3557_08110 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D K3557_07480 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:leim04131]
D K3557_06505 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D K3557_12650 flotillin K07192 FLOT; flotillin
D K3557_04700 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D K3557_02970 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_08070 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_13910 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_01940 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D K3557_19970 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:leim03032]
D K3557_17080 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D K3557_06770 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_10660 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_11925 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_18470 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D K3557_06255 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D K3557_02135 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D K3557_17885 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D K3557_06775 AAA family ATPase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D K3557_11105 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D K3557_12405 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D K3557_09460 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D K3557_13000 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D K3557_19790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D K3557_06480 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D K3557_19625 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D K3557_12815 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D K3557_09520 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_18750 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_15125 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D K3557_19520 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D K3557_20045 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D K3557_09335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D K3557_08925 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D K3557_19815 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D K3557_16875 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D K3557_05645 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D K3557_03330 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:leim03036]
D K3557_06770 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_10660 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_11925 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_17015 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D K3557_04700 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D K3557_12650 flotillin K07192 FLOT; flotillin
D K3557_14160 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D K3557_18470 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D K3557_06255 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D K3557_02135 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D K3557_17885 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D K3557_19730 hspQ; (GenBank) heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D K3557_09075 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein
D K3557_05360 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D K3557_00035 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_01885 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_06055 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_06235 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_10880 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_15225 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_15510 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_17460 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D K3557_17165 AAA family ATPase K03529 smc; chromosome segregation protein
D K3557_06215 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D K3557_06220 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D K3557_11780 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D K3557_14365 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D K3557_11860 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D K3557_19710 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D K3557_11865 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D K3557_11785 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D K3557_11820 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_14360 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D K3557_11775 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D K3557_08095 cell division protein ZapA K09888 zapA; cell division protein ZapA
D K3557_20135 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D K3557_10790 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D K3557_08470 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D K3557_06115 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D K3557_06110 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D K3557_06105 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D K3557_01025 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D K3557_01020 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D K3557_01015 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D K3557_01005 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_17335 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D K3557_18795 AAA family ATPase K03496 parA; chromosome partitioning protein
D K3557_00195 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D K3557_10625 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D K3557_18800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D K3557_16875 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D K3557_05645 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D K3557_18785 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D K3557_18790 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D K3557_09305 trmFO; (GenBank) methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D K3557_03085 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D K3557_07250 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D K3557_11880 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D K3557_13915 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D K3557_16500 yihA; (GenBank) ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:leim03400]
D K3557_03070 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D K3557_07185 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D K3557_08225 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D K3557_19540 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D K3557_15870 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D K3557_14580 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D K3557_18905 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D K3557_19050 mutT; (GenBank) 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D K3557_00980 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D K3557_15865 bifunctional helix-turn-helix domain-containing protein/methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D K3557_20090 trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D K3557_19095 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D K3557_14610 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D K3557_08540 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D K3557_10260 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D K3557_17900 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D K3557_06155 xth; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D K3557_19670 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D K3557_12505 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D K3557_09335 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D K3557_20045 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D K3557_07955 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D K3557_01265 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D K3557_14725 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D K3557_11895 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D K3557_16435 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D K3557_16810 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D K3557_16805 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D K3557_16610 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D K3557_17050 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D K3557_09040 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D K3557_18835 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D K3557_17755 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D K3557_04860 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D K3557_18395 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D K3557_13000 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D K3557_19790 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D K3557_06480 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D K3557_19625 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D K3557_12815 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D K3557_09520 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_18750 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D K3557_15125 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D K3557_09460 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D K3557_01345 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D K3557_11935 vsr; (GenBank) DNA mismatch endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D K3557_08845 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D K3557_03135 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D K3557_03140 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D K3557_03130 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D K3557_03100 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D K3557_11140 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D K3557_19795 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D K3557_09330 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D K3557_16995 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D K3557_15145 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D K3557_11760 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D K3557_18680 addA; (GenBank) double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D K3557_08690 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D K3557_08925 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D K3557_19815 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D K3557_03330 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D K3557_18470 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D K3557_06255 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D K3557_02135 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D K3557_19985 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D K3557_14160 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D K3557_17600 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D K3557_08205 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D K3557_12635 hypothetical protein K14160 imuA; protein ImuA
D K3557_20205 DNA polymerase Y family protein K14161 imuB; protein ImuB
D K3557_20070 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D K3557_03230 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D K3557_08290 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D K3557_12960 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:leim03029]
D K3557_19305 petB; (GenBank) cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D K3557_19045 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D K3557_11020 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D K3557_08320 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D K3557_16775 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D K3557_16865 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D K3557_16780 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D K3557_17250 elongation factor G K02355 fusA; elongation factor G
D K3557_12220 disulfide oxidoreductase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D K3557_17005 era; (GenBank) GTPase Era K03595 era; GTPase
D K3557_06315 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D K3557_19635 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D K3557_04335 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D K3557_06200 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D K3557_10245 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D K3557_19700 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D K3557_11705 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D K3557_10250 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D K3557_09460 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D K3557_09380 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D K3557_19090 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D K3557_18830 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D K3557_04110 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D K3557_04105 co-chaperone GroES K04078 groES; chaperonin GroES
D K3557_19085 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D K3557_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D K3557_08110 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D K3557_11880 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D K3557_13915 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D K3557_03350 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D K3557_03360 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D K3557_08940 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D K3557_16490 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D K3557_03370 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D K3557_13355 SCO family protein K07152 SCO1; protein SCO1
D K3557_18645 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:leim02000]
D K3557_04660 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D K3557_07375 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D K3557_18925 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D K3557_10365 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D K3557_18930 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D K3557_02505 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D K3557_16010 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D K3557_06290 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D K3557_15640 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D K3557_15650 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D K3557_15645 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D K3557_14815 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D K3557_14820 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D K3557_14825 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D K3557_01480 tauA; (GenBank) taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D K3557_02325 ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein
D K3557_02335 ABC transporter permease subunit K15552 tauC; taurine transport system permease protein
D K3557_02330 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D K3557_14255 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D K3557_17620 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D K3557_17630 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D K3557_11250 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D K3557_19270 thiB; (GenBank) thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D K3557_19275 thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein
D K3557_19280 ATP-binding cassette domain-containing protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D K3557_00520 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D K3557_00565 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D K3557_02355 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D K3557_00530 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D K3557_00575 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D K3557_02370 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D K3557_00535 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D K3557_00580 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D K3557_02365 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D K3557_00525 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D K3557_00570 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D K3557_02360 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D K3557_18140 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D K3557_18155 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D K3557_18150 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D K3557_18145 ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D K3557_18120 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D K3557_18110 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D K3557_18115 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D K3557_18125 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D K3557_03690 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D K3557_12060 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D K3557_12065 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D K3557_03680 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D K3557_12050 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D K3557_03685 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D K3557_12055 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D K3557_09535 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D K3557_09540 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D K3557_09545 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D K3557_09550 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D K3557_05220 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D K3557_02830 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D K3557_02815 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D K3557_02810 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D K3557_02825 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D K3557_02820 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D K3557_13040 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D K3557_14085 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D K3557_13025 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D K3557_14100 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D K3557_13035 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D K3557_14105 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D K3557_13020 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D K3557_14095 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D K3557_09735 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D K3557_11115 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D K3557_11120 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D K3557_16020 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D K3557_05235 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D K3557_05225 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D K3557_05230 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D K3557_08615 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D K3557_19075 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D K3557_08610 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D K3557_08605 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D K3557_08600 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D K3557_13935 phnD; (GenBank) phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D K3557_13925 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D K3557_13930 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D K3557_13940 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D K3557_13540 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D K3557_16560 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D K3557_13535 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D K3557_16555 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D K3557_13530 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D K3557_16550 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D K3557_13525 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D K3557_16545 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D K3557_02015 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_08660 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_09680 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_17645 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D K3557_02000 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_08680 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_09685 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_17665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D K3557_01995 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_08685 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_17650 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D K3557_02010 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_08665 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_09695 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_17670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D K3557_02005 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_08670 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_09700 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_17640 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D K3557_01470 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_01475 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_02265 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_03050 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_03055 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_05940 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_07500 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_16390 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_18055 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D K3557_02270 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D K3557_02275 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D K3557_05930 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D K3557_05935 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D K3557_16395 ehuC; (GenBank) ectoine/hydroxyectoine ABC transporter permease subunit EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein
D K3557_16400 ehuD; (GenBank) ectoine/hydroxyectoine ABC transporter permease subunit EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein
D K3557_02260 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D K3557_05945 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D K3557_01615 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_08990 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_09425 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_10315 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_11585 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_13200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_13470 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_13675 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_15530 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_16105 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_16310 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_19010 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_19900 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D K3557_01620 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_05780 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_09430 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_10320 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_11590 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_13195 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_13475 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_13680 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_15535 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_16315 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_19890 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D K3557_01625 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_05775 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_09435 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_10325 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_11595 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_13190 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_13480 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_13685 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_15540 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_16320 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_19885 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D K3557_01630 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_09440 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_10330 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_11580 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_13205 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_13485 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_13690 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_15525 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_16325 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_19880 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D K3557_13210 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D K3557_13695 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D K3557_16330 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D K3557_15060 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D K3557_15055 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D K3557_15050 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D K3557_15045 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D K3557_13255 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D K3557_15370 ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D K3557_13260 iron ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein
D K3557_13265 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein
D K3557_13270 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D K3557_02085 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D K3557_03700 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D K3557_02090 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D K3557_03705 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D K3557_02095 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D K3557_03710 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D K3557_00815 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D K3557_00825 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein
D K3557_00830 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D K3557_00820 manganese/iron ABC transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D K3557_17395 cbiQ; (GenBank) cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D K3557_17405 cbiM; (GenBank) cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D K3557_17390 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D K3557_17410 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D K3557_17400 cobalt ABC transporter permease K16915 cbiL; nickel transport protein
D K3557_04450 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D K3557_04455 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D K3557_06470 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D K3557_06465 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D K3557_19155 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D K3557_02305 ABC transporter permease K19341 nosY; Cu-processing system permease protein
D K3557_02300 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D K3557_05600 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D K3557_05605 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D K3557_07475 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D K3557_07470 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D K3557_07465 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D K3557_07460 ccmA; (GenBank) heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D K3557_14360 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D K3557_14365 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein
D K3557_04485 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D K3557_14750 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D K3557_14755 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D K3557_20060 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D K3557_01100 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D K3557_08440 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D K3557_01105 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D K3557_08435 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D K3557_08770 sufC; (GenBank) Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D K3557_05690 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D K3557_09960 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D K3557_13295 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D K3557_16090 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D K3557_15470 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D K3557_05430 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D K3557_09030 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D K3557_07950 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D K3557_19970 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D K3557_10420 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D K3557_16925 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D K3557_16930 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D K3557_19145 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D K3557_02130 ammonium transporter K03320 amt; ammonium transporter, Amt family
D K3557_09140 ammonium transporter K03320 amt; ammonium transporter, Amt family
D K3557_16035 ammonium transporter K03320 amt; ammonium transporter, Amt family
D K3557_00625 gstA; (GenBank) glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_00950 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_01275 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_04775 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_05540 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_10000 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_17710 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_18510 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_19620 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D K3557_14220 DUF1194 domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D K3557_13345 formate/nitrite transporter family protein K02598 nirC; nitrite transporter
D K3557_07210 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel
D K3557_15240 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D K3557_15935 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D K3557_17315 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D K3557_15550 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D K3557_05315 mgtE; (GenBank) magnesium transporter K06213 mgtE; magnesium transporter
D K3557_18285 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D K3557_19205 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D K3557_15375 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D K3557_15380 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D K3557_15385 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D K3557_03160 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D K3557_03165 tolR; (GenBank) protein TolR K03560 tolR; biopolymer transport protein TolR
D K3557_16580 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D K3557_20130 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D K3557_07245 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D K3557_19645 porin K08720 ompU; outer membrane protein OmpU
D K3557_08565 porin family protein K16079 omp31; outer membrane immunogenic protein
D K3557_14695 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D K3557_15960 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D K3557_09215 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D K3557_02080 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D K3557_13280 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D K3557_04615 TolC family outer membrane protein K12340 tolC; outer membrane protein
D K3557_02510 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D K3557_12345 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D K3557_09380 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D K3557_07410 PQQ-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D K3557_11765 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D K3557_02955 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA
D K3557_02950 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D K3557_19160 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D K3557_19165 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D K3557_06460 lptD; (GenBank) LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D K3557_19630 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D K3557_00735 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein
D K3557_14185 divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family
D K3557_00395 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D K3557_08465 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D K3557_07395 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump
D K3557_08820 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump
D K3557_15885 DMT family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D K3557_07360 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D K3557_05620 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D K3557_03775 BCCT family transporter K05020 opuD; glycine betaine transporter
D K3557_05390 BCCT family transporter K05020 opuD; glycine betaine transporter
D K3557_16100 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D K3557_14740 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D K3557_09505 cation acetate symporter K14393 actP; cation/acetate symporter
D K3557_03480 gltS; (GenBank) sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D K3557_03980 nhaC; (GenBank) Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D K3557_12190 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D K3557_09080 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D K3557_10430 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D K3557_09085 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D K3557_04160 uracil-xanthine permease family protein K02824 uraA; uracil permease
D K3557_16070 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D K3557_11755 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D K3557_07140 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter
D K3557_03430 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D K3557_13705 sulP; (GenBank) sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D K3557_00445 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_01745 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_01765 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_02630 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_05175 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_09485 C4-dicarboxylate TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_10700 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_10955 DctP family TRAP transporter solute-binding subunit K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_12860 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_13880 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_19400 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_19605 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D K3557_00450 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_01750 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_01770 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_02635 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_05170 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_09480 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_10950 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_12865 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_13870 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D K3557_19405 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_19455 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D K3557_19600 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D K3557_00455 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_01755 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_01775 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_02640 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_05165 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_09475 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_10945 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_12870 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_13875 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_19410 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_19450 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D K3557_19595 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D K3557_09880 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D K3557_09885 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D K3557_09890 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D K3557_09895 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D K3557_09900 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D K3557_09905 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D K3557_00910 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D K3557_12830 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D K3557_20185 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D K3557_05365 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D K3557_00040 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D K3557_18475 LysE family translocator K05835 rhtC; threonine efflux protein
D K3557_14530 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D K3557_17790 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D K3557_14535 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D K3557_17795 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D K3557_03735 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D K3557_13965 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D K3557_14230 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D K3557_13970 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D K3557_14235 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D K3557_03725 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D K3557_13975 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D K3557_14240 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D K3557_19955 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D K3557_20190 rubrerythrin family protein K22737 mbfA; erythrin-vacuolar iron transport family protein
D K3557_11820 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D K3557_05680 hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D K3557_15390 TonB C-terminal domain-containing protein K03832 tonB; periplasmic protein TonB
D K3557_03180 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D K3557_03275 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein
D K3557_03175 tolB; (GenBank) Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D K3557_07095 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D K3557_09810 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D K3557_16005 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D K3557_02500 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D K3557_08470 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D K3557_07400 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D K3557_02870 CpsD/CapB family tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D K3557_02875 DUF874 domain-containing protein K25590 epsF; protein tyrosine kinase modulator
D K3557_00005 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D K3557_00010 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA
D K3557_00015 MlaD family protein K06192 pqiB; intermembrane transport protein PqiB/LetB
D K3557_00020 PqiC family protein K09857 pqiC; intermembrane transport lipoprotein PqiC
D K3557_04600 entericidin A/B family lipoprotein K16348 ecnB; entericidin B
D K3557_08170 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:leim02044]
D K3557_04615 TolC family outer membrane protein K12340 tolC; outer membrane protein
D K3557_16010 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D K3557_16005 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D K3557_02505 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D K3557_02500 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D K3557_02510 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D K3557_03240 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D K3557_03285 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D K3557_03280 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D K3557_03270 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D K3557_03265 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D K3557_03260 type II secretion system F family protein K12510 tadB; tight adherence protein B
D K3557_03255 type II secretion system F family protein K12511 tadC; tight adherence protein C
D K3557_12445 pilus assembly protein K12513 tadE; tight adherence protein E
D K3557_03290 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_03295 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_03300 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_19980 YggT family protein K02221 yggT; YggT family protein
D K3557_18275 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D K3557_18265 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D K3557_18305 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D K3557_18210 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D K3557_18315 FliM/FliN family flagellar motor C-terminal domain-containing protein K02417 fliN; flagellar motor switch protein FliN
D K3557_18320 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D K3557_18230 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D K3557_18270 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D K3557_19065 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D K3557_18745 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D K3557_07440 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D K3557_16845 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D K3557_07445 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D K3557_04725 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D K3557_16630 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D K3557_17260 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D K3557_04875 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D K3557_07435 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D K3557_16490 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D K3557_11230 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D K3557_11225 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D K3557_11220 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:leim02042]
D K3557_07245 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:leim02022]
D K3557_08620 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D K3557_08590 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D K3557_06600 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D K3557_18385 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D K3557_14250 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D K3557_14245 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D K3557_16945 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D K3557_16950 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D K3557_17690 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D K3557_06530 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D K3557_10710 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D K3557_10705 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D K3557_09115 PAS domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D K3557_09110 sigma-54 dependent transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D K3557_09105 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D K3557_09100 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D K3557_07075 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D K3557_10965 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D K3557_10960 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D K3557_15355 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D K3557_12545 diguanylate cyclase K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D K3557_08855 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D K3557_09340 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D K3557_18650 ActS/PrrB/RegB family redox-sensitive histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D K3557_18640 ActR/PrrA/RegA family redox response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D K3557_14805 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:leim02035]
D K3557_01550 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_02490 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_02590 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_04060 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_07275 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_07380 nitrate- and nitrite sensing domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_13120 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_16600 CHASE3 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D K3557_18210 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D K3557_18320 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D K3557_18230 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D K3557_18270 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D K3557_18275 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D K3557_18265 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D K3557_07520 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D K3557_18315 FliM/FliN family flagellar motor C-terminal domain-containing protein K02417 fliN; flagellar motor switch protein FliN
D K3557_18305 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D K3557_19225 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D K3557_18245 flgA; (GenBank) flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D K3557_18250 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D K3557_18255 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D K3557_18300 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D K3557_18225 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D K3557_18215 FlgB family protein K02387 flgB; flagellar basal-body rod protein FlgB
D K3557_18220 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D K3557_18170 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D K3557_18235 flagellar hook-basal body complex protein K02391 flgF; flagellar basal-body rod protein FlgF
D K3557_18240 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D K3557_18180 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D K3557_19210 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D K3557_19215 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D K3557_19220 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D K3557_18190 flagellin K02406 fliC; flagellin
D K3557_18840 flagellin K02406 fliC; flagellin
D K3557_18285 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D K3557_19205 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D K3557_18195 flaF; (GenBank) flagellar biosynthesis regulator FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D K3557_18200 flbT; (GenBank) flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D K3557_03290 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_03295 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_03300 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D K3557_03240 prepilin peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D K3557_03285 cpaB; (GenBank) Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D K3557_03280 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D K3557_03270 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE
D K3557_03265 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:leim04812]
D K3557_01025 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D K3557_11775 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D K3557_11780 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D K3557_06115 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D K3557_06110 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D K3557_06105 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D K3557_17335 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D K3557_18795 AAA family ATPase K03496 parA; chromosome partitioning protein
D K3557_00195 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D K3557_10625 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D K3557_18800 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:leim04147]
D K3557_04700 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D K3557_06360 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D K3557_02970 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_08070 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_13910 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D K3557_07870 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D K3557_01940 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D K3557_03755 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D K3557_12650 flotillin K07192 FLOT; flotillin
D K3557_04110 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D K3557_19090 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D K3557_08895 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D K3557_08865 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D K3557_16775 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D K3557_16865 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D K3557_03605 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D K3557_09705 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_13555 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_17680 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D K3557_11155 selenium-binding family protein K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D K3557_10005 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_14425 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_17915 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_19750 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D K3557_18625 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D K3557_09495 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D K3557_16625 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D K3557_03410 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D K3557_14390 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D K3557_18880 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D K3557_02240 dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D K3557_05650 amino acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D K3557_20280 aspartate aminotransferase family protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D K3557_09555 hydA; (GenBank) dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D K3557_17355 fahA; (GenBank) fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D K3557_19915 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D K3557_02985 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05915 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_05925 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_07590 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13885 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_13990 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D K3557_09050 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D K3557_12175 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D K3557_15985 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D K3557_17955 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D K3557_17845 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D K3557_02410 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_07945 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_14345 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D K3557_16905 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D K3557_12435 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D K3557_08905 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D K3557_15730 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D K3557_10940 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:leim02048]
D K3557_19525 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D K3557_06770 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_10660 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_11925 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D K3557_04980 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D K3557_19365 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D K3557_19360 McrC family protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D K3557_11775 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D K3557_01025 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D K3557_16875 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D K3557_05645 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D K3557_01080 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_08195 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D K3557_05730 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D K3557_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:leim04052]
D K3557_16425 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:leim01504]
D K3557_15470 TCR/Tet family MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D K3557_03435 CatB-related O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D K3557_02800 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D K3557_00610 bla; (GenBank) class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D K3557_07050 phosphatidylglycerol lysyltransferase domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D K3557_08470 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D K3557_08465 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D K3557_02545 cueR; (GenBank) Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D K3557_04615 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:leim00537]
D K3557_03755 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:leim03100]
D K3557_00260 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_01580 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_01820 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_13765 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_17540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D K3557_01155 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D K3557_08725 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D K3557_16445 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D K3557_19435 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D K3557_06565 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D K3557_06590 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D K3557_10845 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D K3557_10850 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D K3557_10855 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D K3557_10380 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D K3557_02705 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D K3557_12510 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D K3557_12515 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D K3557_08880 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_10370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_11920 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_11940 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_11945 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D K3557_12290 tRNA-His K14226 tRNA-His; tRNA His
D K3557_00255 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D K3557_01575 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D K3557_13770 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D K3557_17545 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D K3557_03630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_06065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_07610 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_08485 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_18550 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_18575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_19185 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D K3557_19335 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D K3557_00275 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_00860 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_01595 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_06985 tRNA-Ile K14230 tRNA-Met; tRNA Met
D K3557_13750 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_17525 tRNA-Met K14230 tRNA-Met; tRNA Met
D K3557_06245 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D K3557_08285 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D K3557_16295 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D K3557_02215 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D K3557_07220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D K3557_08385 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D K3557_12795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D K3557_12140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D K3557_18570 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D K3557_16855 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D K3557_12035 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D K3557_10860 tRNA-Val K14237 tRNA-Val; tRNA Val
D K3557_10870 tRNA-Val K14237 tRNA-Val; tRNA Val
D K3557_17610 tRNA-Val K14237 tRNA-Val; tRNA Val
D K3557_00250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_01570 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_13775 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_17550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D K3557_00265 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_01585 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_13760 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_17535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D K3557_00270 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_01590 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_13755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D K3557_17530 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D K3557_12605 carnitine 3-dehydrogenase K27497 K27497; carnitine 3-dehydrogenase / betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33]
D K3557_02315 hisD; (GenBank) histidinol dehydrogenase K15509 hpsN; sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
D K3557_10180 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D K3557_10185 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D K3557_08655 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D K3557_09600 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D K3557_13050 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D K3557_11040 (2Fe-2S)-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D K3557_11030 FAD binding domain-containing protein K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D K3557_06000 xanthine dehydrogenase family protein molybdopterin-binding subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D K3557_11035 xanthine dehydrogenase family protein molybdopterin-binding subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D K3557_08140 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D K3557_15515 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D K3557_13570 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D K3557_15900 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D K3557_06030 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D K3557_11655 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D K3557_11660 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D K3557_00240 NADH:flavin oxidoreductase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-]
D K3557_04165 FAD-dependent oxidoreductase K22551 hpbA; N-methyl-L-proline demethylase [EC:1.5.3.-]
D K3557_14480 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D K3557_00645 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D K3557_05290 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D K3557_00435 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D K3557_17235 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D K3557_18495 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D K3557_18855 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D K3557_18490 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D K3557_04470 yghU; (GenBank) glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D K3557_04890 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D K3557_01370 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D K3557_17135 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D K3557_17560 msrP; (GenBank) protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D K3557_07915 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D K3557_09180 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D K3557_17805 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D K3557_01360 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D K3557_12470 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D K3557_08745 HD domain-containing protein K24290 tmpB; [1-hydroxy-2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.13.11.90]
D K3557_08740 gamma-butyrobetaine dioxygenase K24291 tmpA; [2-(trimethylamino)ethyl]phosphonate dioxygenase [EC:1.14.11.72]
D K3557_04260 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D K3557_13315 lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D K3557_13790 aromatic ring-hydroxylating dioxygenase subunit alpha K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D K3557_16115 aromatic ring-hydroxylating dioxygenase subunit alpha K24003 stc2; stachydrine N-demethylase [EC:1.14.13.247]
D K3557_13275 siderophore-interacting protein K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9]
D K3557_11005 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D K3557_09955 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D K3557_09000 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D K3557_04610 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D K3557_11190 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D K3557_07190 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D K3557_02835 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D K3557_06295 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D K3557_00740 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D K3557_08330 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D K3557_12610 3-keto-5-aminohexanoate cleavage protein K27837 cdhC; 3-dehydrocarnitine:acetyl-CoA trimethylamine transferase [EC:2.3.1.317]
D K3557_04115 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D K3557_01160 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D K3557_11665 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D K3557_08700 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K14660 nodE; nodulation protein E [EC:2.3.1.-]
D K3557_05525 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D K3557_09725 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D K3557_10680 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D K3557_06285 GNAT family N-acetyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D K3557_08335 GNAT family N-acetyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D K3557_04250 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D K3557_06070 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D K3557_06335 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D K3557_08870 CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D K3557_03155 ybgC; (GenBank) tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D K3557_16535 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D K3557_05395 betC; (GenBank) choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D K3557_12820 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D K3557_10135 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D K3557_13305 alpha/beta hydrolase K07017 besA; ferri-bacillibactin esterase [EC:3.1.-.-]
D K3557_05070 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D K3557_14895 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D K3557_17110 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D K3557_17115 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D K3557_18990 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D K3557_05305 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D K3557_20025 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D K3557_17435 alpha/beta fold hydrolase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D K3557_18425 caiD; (GenBank) crotonobetainyl-CoA hydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149]
D K3557_00785 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D K3557_20035 TIM barrel protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D K3557_14910 cadA; (GenBank) cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D K3557_15940 sfsA; (GenBank) DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D K3557_19895 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
C 99982 Energy metabolism
D K3557_14525 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D K3557_12210 ferredoxin family protein K05524 fdxA; ferredoxin
D K3557_02465 tcuB; (GenBank) tricarballylate utilization 4Fe-4S protein TcuB K13795 citB; citrate/tricarballylate utilization protein
D K3557_02460 tcuA; (GenBank) FAD-dependent tricarballylate dehydrogenase TcuA K13796 cobZ; tricarballylate dehydrogenase
D K3557_02775 VWA domain-containing protein K02448 norD; nitric oxide reductase NorD protein
D K3557_02770 CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein
D K3557_19830 chaperone NapD K02570 napD; periplasmic nitrate reductase NapD
D K3557_19825 ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D K3557_19820 napE; (GenBank) periplasmic nitrate reductase, NapE protein K02571 napE; periplasmic nitrate reductase NapE
D K3557_19845 NapC/NirT family cytochrome c K02569 napC; NapC/NirT family cytochrome c
D K3557_16900 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D K3557_16110 hybrid-cluster NAD(P)-dependent oxidoreductase K24004 stc4; stachydrine N-demethylase, reductase component
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D K3557_04370 EI24 domain-containing protein K06203 cysZ; CysZ protein
D K3557_19650 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D K3557_13820 cupin domain-containing protein K21700 bauB; beta-alanine degradation protein BauB
C 99986 Glycan metabolism
D K3557_14305 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D K3557_12730 cobW; (GenBank) cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D K3557_18580 tetratricopeptide repeat protein K02498 hemY; HemY protein
D K3557_17910 ubiB; (GenBank) 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D K3557_14510 mobB; (GenBank) molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D K3557_15205 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D K3557_09150 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D K3557_09870 polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
D K3557_15280 polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
D K3557_15850 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D K3557_05810 DoxX family protein K15977 K15977; putative oxidoreductase
D K3557_08535 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D K3557_01115 cold-shock protein K03704 cspA; cold shock protein
D K3557_02750 cold-shock protein K03704 cspA; cold shock protein
D K3557_05795 cold-shock protein K03704 cspA; cold shock protein
D K3557_08275 cold shock domain-containing protein K03704 cspA; cold shock protein
D K3557_17925 cold-shock protein K03704 cspA; cold shock protein
D K3557_11700 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D K3557_14880 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D K3557_07635 tig; (GenBank) trigger factor K03545 tig; trigger factor
D K3557_17555 msrQ; (GenBank) protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D K3557_16055 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D K3557_00945 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D K3557_18435 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein
D K3557_11050 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D K3557_13015 xdhC; (GenBank) xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D K3557_19080 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D K3557_17760 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D K3557_00930 YraN family protein K07460 yraN; putative endonuclease
D K3557_03335 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D K3557_16585 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D K3557_00295 transposase K07483 K07483; transposase
D K3557_00470 hypothetical protein K07483 K07483; transposase
D K3557_01510 transposase K07483 K07483; transposase
D K3557_03955 hypothetical protein K07483 K07483; transposase
D K3557_13490 transposase K07483 K07483; transposase
D K3557_16350 hypothetical protein K07483 K07483; transposase
D K3557_17500 transposase K07483 K07483; transposase
D K3557_00285 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D K3557_00300 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D K3557_00475 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D K3557_06575 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase
D K3557_00335 IS110 family transposase K07486 K07486; transposase
D K3557_01330 IS110 family transposase K07486 K07486; transposase
D K3557_05245 transposase K07486 K07486; transposase
D K3557_05655 transposase K07486 K07486; transposase
D K3557_10175 IS110 family transposase K07486 K07486; transposase
D K3557_10470 IS110 family transposase K07486 K07486; transposase
D K3557_13140 IS110 family transposase K07486 K07486; transposase
D K3557_00165 Mu transposase C-terminal domain-containing protein K07497 K07497; putative transposase
D K3557_01520 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D K3557_15135 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D K3557_05575 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D K3557_04520 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D K3557_02400 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D K3557_17470 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D K3557_13575 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D K3557_04885 septation protein IspZ K06190 ispZ; intracellular septation protein
D K3557_05160 allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
D K3557_02530 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D K3557_20080 peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D K3557_01230 universal stress protein K14061 uspF; universal stress protein F
D K3557_08450 universal stress protein K14061 uspF; universal stress protein F
D K3557_08825 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D K3557_00725 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D K3557_02520 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D K3557_09510 CBS domain-containing protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D K3557_16015 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D K3557_12340 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D K3557_12350 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D K3557_14860 glycoside hydrolase family 25 protein K07273 acm; lysozyme
D K3557_11465 outer membrane beta-barrel protein K07275 ompW; outer membrane protein
D K3557_04435 AsmA family protein K07289 asmA; AsmA protein
D K3557_08155 ccmE; (GenBank) cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D K3557_07320 ccmI; (GenBank) c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D K3557_08175 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D K3557_08595 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D K3557_09860 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein
D K3557_15610 phnK; (GenBank) phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D K3557_02295 nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D K3557_12675 peptidase K07231 K07231; putative iron-regulated protein
D K3557_02730 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D K3557_02310 nitrous oxide reductase accessory protein NosL K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D K3557_11145 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D K3557_01810 tRNA-binding protein K06878 K06878; tRNA-binding protein
D K3557_04280 tRNA-binding protein K06878 K06878; tRNA-binding protein
D K3557_03030 group III truncated hemoglobin K06886 glbN; hemoglobin
D K3557_09255 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D K3557_13405 group III truncated hemoglobin K06886 glbN; hemoglobin
D K3557_08980 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D K3557_03560 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D K3557_14885 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D K3557_08785 sufB; (GenBank) Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D K3557_08765 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD
D K3557_08420 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D K3557_15260 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D K3557_18740 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D K3557_07020 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D K3557_19850 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D K3557_04305 arsH; (GenBank) arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D K3557_12990 SlyX family protein K03745 slyX; SlyX protein
D K3557_11485 CreA family protein K05805 creA; CreA protein
D K3557_03025 TIGR01620 family protein K08990 ycjF; putative membrane protein
C 99997 Function unknown
D K3557_07285 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D K3557_05275 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D K3557_19320 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D K3557_10525 hypothetical protein K06903 W; Bacteriophage baseplate protein W
D K3557_03015 YcjX family protein K06918 K06918; uncharacterized protein
D K3557_11200 ATP-binding protein K06923 K06923; uncharacterized protein
D K3557_12020 CoA-binding protein K06929 K06929; uncharacterized protein
D K3557_07310 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D K3557_03225 pdeM; (GenBank) ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein
D K3557_15690 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D K3557_16705 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D K3557_20180 cupin domain-containing protein K06995 K06995; uncharacterized protein
D K3557_07175 VOC family protein K06996 K06996; uncharacterized protein
D K3557_07855 VOC family protein K06996 K06996; uncharacterized protein
D K3557_01050 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D K3557_15320 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D K3557_08800 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D K3557_05850 VOC family protein K07032 K07032; uncharacterized protein
D K3557_13625 FAD-dependent oxidoreductase K07077 K07077; uncharacterized protein
D K3557_08460 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D K3557_01690 permease K07089 K07089; uncharacterized protein
D K3557_03665 permease K07089 K07089; uncharacterized protein
D K3557_07300 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D K3557_07450 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D K3557_14110 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D K3557_14285 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D K3557_15785 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D K3557_16970 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D K3557_17970 TSUP family transporter K07090 K07090; uncharacterized protein
D K3557_09830 PhoX family phosphatase K07093 K07093; uncharacterized protein
D K3557_14605 metallophosphoesterase family protein K07096 K07096; uncharacterized protein
D K3557_03105 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D K3557_09640 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D K3557_09645 hypothetical protein K07112 K07112; uncharacterized protein
D K3557_09825 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D K3557_11055 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D K3557_11060 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D K3557_11600 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D K3557_14765 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D K3557_16495 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D K3557_19685 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D K3557_11065 VWA domain-containing protein K07161 K07161; uncharacterized protein
D K3557_16475 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D K3557_08280 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D K3557_03580 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D K3557_04380 DUF167 domain-containing protein K09131 K09131; uncharacterized protein
D K3557_04035 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D K3557_06820 YfbU family protein K09161 K09161; uncharacterized protein
D K3557_14760 carbon monoxide dehydrogenase subunit G K09386 K09386; uncharacterized protein
D K3557_06330 cupin domain-containing protein K09705 K09705; uncharacterized protein
D K3557_15065 DUF333 domain-containing protein K09712 K09712; uncharacterized protein
D K3557_20165 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D K3557_06190 hypothetical protein K09780 K09780; uncharacterized protein
D K3557_06195 YciI family protein K09780 K09780; uncharacterized protein
D K3557_18605 YciI family protein K09780 K09780; uncharacterized protein
D K3557_08075 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D K3557_02525 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D K3557_18805 YbaN family protein K09790 K09790; uncharacterized protein
D K3557_19690 Trm112 family protein K09791 K09791; uncharacterized protein
D K3557_05410 YdcH family protein K09794 K09794; uncharacterized protein
D K3557_12165 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D K3557_19990 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D K3557_15990 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D K3557_03090 DUF484 family protein K09921 K09921; uncharacterized protein
D K3557_19420 winged helix DNA-binding domain-containing protein K09927 K09927; uncharacterized protein
D K3557_17040 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D K3557_05820 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D K3557_18080 TIGR04282 family arsenosugar biosynthesis glycosyltransferase K09931 K09931; uncharacterized protein
D K3557_01375 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D K3557_04805 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D K3557_17310 YegP family protein K09946 K09946; uncharacterized protein
D K3557_12705 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D K3557_01925 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D K3557_00855 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D K3557_02160 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D K3557_14170 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein
D K3557_04085 TraB/GumN family protein K09973 K09973; uncharacterized protein
D K3557_04090 TraB/GumN family protein K09973 K09973; uncharacterized protein
D K3557_18045 HutD family protein K09975 K09975; uncharacterized protein
D K3557_01240 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein
D K3557_04155 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D K3557_07135 hypothetical protein K09985 K09985; uncharacterized protein
D K3557_20030 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D K3557_15170 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D K3557_06125 VWA domain-containing protein K09989 K09989; uncharacterized protein
D K3557_12700 imelysin family protein K07338 K07338; uncharacterized protein
D K3557_19040 RNA-binding protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 26, 2025