+E Transcription factors KO #

  Transcription Factors - Lentilactobacillus hilgardii

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family D G8J22_00617 gltC; HTH-type transcriptional regulator GltC K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D G8J22_02736 cysL_2; HTH-type transcriptional regulator CysL K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D G8J22_02212 ccpN; Transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D G8J22_01228 ccpA_4; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G8J22_00136 melR_1; HTH-type transcriptional repressor MelR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G8J22_00499 ccpA_1; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G8J22_00606 ccpA_2; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G8J22_00679 malR; HTH-type transcriptional regulator MalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G8J22_00845 ccpA_3; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G8J22_00988 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G8J22_02438 melR_3; HTH-type transcriptional repressor MelR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D G8J22_01507 kdgR_2; HTH-type transcriptional regulator KdgR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D G8J22_00760 kdgR_1; HTH-type transcriptional regulator KdgR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D G8J22_02133 purR_2; HTH-type transcriptional repressor PurR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D G8J22_02485 araR; Arabinose metabolism transcriptional repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D G8J22_02512 gmuR; HTH-type transcriptional regulator GmuR K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D G8J22_01831 nagR; HTH-type transcriptional repressor NagR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator C TetR/AcrR family D G8J22_00411 slmA; Nucleoid occlusion factor SlmA K09017 rutR; TetR/AcrR family transcriptional regulator C Lrp/AsnC family D G8J22_00348 lrpC_1; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D G8J22_00682 lrpC_2; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D G8J22_00720 slyA_1; Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D G8J22_00854 hypothetical protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D G8J22_01653 ohrR; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D G8J22_01578 glnR; HTH-type transcriptional regulator GlnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D G8J22_01492 adhR; HTH-type transcriptional regulator AdhR K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator C Fur family D G8J22_02120 zur; Zinc-specific metallo-regulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D G8J22_02287 perR; Peroxide operon regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family D G8J22_00415 crp; CRP-like cAMP-activated global transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D G8J22_00461 ntcA; Global nitrogen regulator K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator C Rrf2 family C ArsR family D G8J22_01503 hypothetical protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D G8J22_00817 czrA; HTH-type transcriptional repressor CzrA K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D G8J22_02300 sutR; HTH-type transcriptional regulator SutR K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family D G8J22_00396 hypothetical protein K10947 K10947; PadR family transcriptional regulator D G8J22_02042 hypothetical protein K10947 K10947; PadR family transcriptional regulator C Other families D G8J22_02045 mntR; HTH-type transcriptional regulator MntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D G8J22_01945 ybbH; putative HTH-type transcriptional regulator YbbH K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D G8J22_01949 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D G8J22_01885 purR_1; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D G8J22_02158 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D G8J22_01764 rex; Redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D G8J22_01480 hypothetical protein K07727 K07727; putative transcriptional regulator D G8J22_02408 hypothetical protein K07727 K07727; putative transcriptional regulator D G8J22_02053 hypothetical protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D G8J22_00253 pucR; Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D G8J22_00781 spo0J; Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D G8J22_01560 argR_2; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D G8J22_00457 argR_1; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D G8J22_01273 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D G8J22_01476 tenA_3; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D G8J22_00416 tenA_1; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D G8J22_00437 tenA_2; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D G8J22_02025 ctsR; Transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D G8J22_01743 hypothetical protein K03973 pspC; phage shock protein C D G8J22_01964 deoR; Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator D G8J22_01451 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D G8J22_01620 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D G8J22_00948 mraZ; Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0