+E Transcription factors KO
#
Transcription Factors - Lentilactobacillus hilgardii
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
D G8J22_00617 gltC; HTH-type transcriptional regulator GltC K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D G8J22_02736 cysL_2; HTH-type transcriptional regulator CysL K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D G8J22_02212 ccpN; Transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D G8J22_01228 ccpA_4; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G8J22_00136 melR_1; HTH-type transcriptional repressor MelR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G8J22_00499 ccpA_1; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G8J22_00606 ccpA_2; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G8J22_00679 malR; HTH-type transcriptional regulator MalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G8J22_00845 ccpA_3; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G8J22_00988 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G8J22_02438 melR_3; HTH-type transcriptional repressor MelR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D G8J22_01507 kdgR_2; HTH-type transcriptional regulator KdgR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D G8J22_00760 kdgR_1; HTH-type transcriptional regulator KdgR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D G8J22_02133 purR_2; HTH-type transcriptional repressor PurR K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D G8J22_02485 araR; Arabinose metabolism transcriptional repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D G8J22_02512 gmuR; HTH-type transcriptional regulator GmuR K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D G8J22_01831 nagR; HTH-type transcriptional repressor NagR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
C TetR/AcrR family
D G8J22_00411 slmA; Nucleoid occlusion factor SlmA K09017 rutR; TetR/AcrR family transcriptional regulator
C Lrp/AsnC family
D G8J22_00348 lrpC_1; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D G8J22_00682 lrpC_2; HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
C MarR family
D G8J22_00720 slyA_1; Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D G8J22_00854 hypothetical protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D G8J22_01653 ohrR; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D G8J22_01578 glnR; HTH-type transcriptional regulator GlnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D G8J22_01492 adhR; HTH-type transcriptional regulator AdhR K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
C Fur family
D G8J22_02120 zur; Zinc-specific metallo-regulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D G8J22_02287 perR; Peroxide operon regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D G8J22_00415 crp; CRP-like cAMP-activated global transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D G8J22_00461 ntcA; Global nitrogen regulator K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
C Rrf2 family
C ArsR family
D G8J22_01503 hypothetical protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D G8J22_00817 czrA; HTH-type transcriptional repressor CzrA K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
D G8J22_02300 sutR; HTH-type transcriptional regulator SutR K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
D G8J22_00396 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D G8J22_02042 hypothetical protein K10947 K10947; PadR family transcriptional regulator
C Other families
D G8J22_02045 mntR; HTH-type transcriptional regulator MntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D G8J22_01945 ybbH; putative HTH-type transcriptional regulator YbbH K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D G8J22_01949 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D G8J22_01885 purR_1; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D G8J22_02158 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D G8J22_01764 rex; Redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D G8J22_01480 hypothetical protein K07727 K07727; putative transcriptional regulator
D G8J22_02408 hypothetical protein K07727 K07727; putative transcriptional regulator
D G8J22_02053 hypothetical protein K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D G8J22_00253 pucR; Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D G8J22_00781 spo0J; Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D G8J22_01560 argR_2; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D G8J22_00457 argR_1; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D G8J22_01273 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D G8J22_01476 tenA_3; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D G8J22_00416 tenA_1; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D G8J22_00437 tenA_2; Aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D G8J22_02025 ctsR; Transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D G8J22_01743 hypothetical protein K03973 pspC; phage shock protein C
D G8J22_01964 deoR; Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator
D G8J22_01451 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D G8J22_01620 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D G8J22_00948 mraZ; Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
#
Classification taken and modified from TRANSFAC 7.0