+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Linepithema humile (Argentine ant)
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 105670218 Fib; rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 105667721 Nop56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 105669089 nop5; nucleolar protein 58 K14565 NOP58; nucleolar protein 58
D 105671353 hoip; NHP2-like protein 1 homolog K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D 105670336 box C/D snoRNA protein 1 K27833 ZNHIT6; box C/D snoRNA protein 1
C Box H/ACA snoRNPs
D 105678502 Nop60B; H/ACA ribonucleoprotein complex subunit 4 isoform X2 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 105668665 Gar1; probable H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 105672576 NHP2; H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D 105674118 Nop10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D 105676248 H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X2 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
D 105668363 protein SHQ1 homolog K14764 SHQ1; protein SHQ1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D 105673356 U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 105668963 U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D 105670482 U3 small nucleolar ribonucleoprotein protein MPP10 isoform X1 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D 105677970 ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7
D 105677894 periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2
D 105679881 l(3)07882; nucleolar protein 14 homolog K14766 NOP14; nucleolar protein 14
D 105672775 Sas10; something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D 105674702 l(3)72Dn; U3 small nucleolar RNA-associated protein 4 homolog isoform X1 K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D 105676468 WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D 105675292 U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D 105673848 WD repeat-containing protein 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D 105676790 l(2)k09022; HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D 105679665 probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D 105677757 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D 105671415 transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D 105676775 U3 small nucleolar RNA-associated protein 14 homolog A K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D 105670616 U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D 105667752 l(2)05287; WD repeat-containing protein 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D 105671511 wcd; U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D 105677587 nucleolar complex protein 4 homolog B K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D 105670155 small subunit processome component 20 homolog isoform X1 K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D 105673676 WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D 105667786 Mat89Ba; nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D 105671031 rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D 105679339 Bka; rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 105672069 U3 small nucleolar RNA-associated protein 25 homolog K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D 105678202 ribosomal L1 domain-containing protein CG13096 K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D 105668818 probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D 105680012 pths; ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D 105672303 Dbp45A; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D 105679870 ais; probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D 105675927 Dhx15; putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 105678224 kz; probable ATP-dependent RNA helicase kurz K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D 105679803 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D 105675222 ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D 105668156 drosha; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D 105676195 uncharacterized protein isoform X1 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D 105678381 lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D 105667387 CkIIalpha; casein kinase II subunit alpha isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 105677604 CkIIbeta; casein kinase II subunit beta isoform X1 K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D 105671400 protein AATF-like K14782 AATF; protein AATF/BFR2
D 105674994 protein AATF-like isoform X1 K14782 AATF; protein AATF/BFR2
D 105668151 ribosomal RNA small subunit methyltransferase NEP1 isoform X1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D 105677238 activator of basal transcription 1-like K14785 ESF2; ESF2/ABP1 family protein
D 105674162 protein KRI1 homolog K14786 KRI1; protein KRI1
D 105670107 dbe; KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein
D 105673407 probable RNA-binding protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1
D 105670635 l(1)G0020; RNA cytidine acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D 105671274 l(2)34Fd; nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2
D 105669198 nucleolar protein 9 K14790 NOP9; nucleolar protein 9
D 105672010 nclb; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 105678876 Rtc1; RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D 105667451 Rrp5; rRNA biogenesis protein RRP5 K14792 RRP5; rRNA biogenesis protein RRP5
D 105672659 U3-55K; U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9
D 105676762 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 105668122 ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36
D 105674704 LOW QUALITY PROTEIN: ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36
D 105672166 DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D 105671830 serine/threonine-protein kinase rio1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D 105668730 RIOK2; uncharacterized protein RIOK2 isoform X1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D 105679479 LOW QUALITY PROTEIN: serine/threonine-protein kinase RIO2-like K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D 105675304 probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D 105678661 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D 105668400 Mettl5; rRNA N6-adenosine-methyltransferase Mettl5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5
D 105671602 bys; bystin K14797 ENP1; essential nuclear protein 1
D 105667297 LTV1; protein LTV1 homolog K14798 LTV1; protein LTV1
D 105676259 RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1
D 105670028 l(1)G0004; RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1
D 105673799 Ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 105679128 Ak6; adenylate kinase isoenzyme 6 K18532 AK6; adenylate kinase [EC:2.7.4.3]
D 105667294 Tsr1; pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1
D 105675157 pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2
D 105670939 18S rRNA aminocarboxypropyltransferase-like isoform X1 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D 105675992 18S rRNA aminocarboxypropyltransferase K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D 105677619 Zfrp8; programmed cell death protein 2 isoform X2 K14801 TSR4; pre-rRNA-processing protein TSR4
D 105679499 trus; programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4
D 105676253 active regulator of SIRT1-like K26536 RPS19BP1; active regulator of SIRT1
D 105673591 emb; exportin-1 K14290 XPO1; exportin-1
D 105676367 Fs(2)Ket; importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1
D 105680096 Tnpo; transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 105675597 importin-4-like K20221 IPO4; importin-4
D 105668769 Karybeta3; importin-5 K20222 IPO5; importin-5
D 105670046 msk; importin-7 K20223 IPO7; importin-7
D 105671460 Ipo9; importin-9 isoform X1 K20224 IPO9; importin-9
C Other pre-40S particles
D 105669563 ATP8A; probable phospholipid-transporting ATPase IA isoform X3 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 105668989 eIF3j; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J
D 105678383 probable protein phosphatase 2C T23F11.1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16]
D 105670676 pix; protein Pixie K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D 105670345 uncharacterized protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 105670350 uncharacterized protein isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 105673828 uncharacterized protein K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 105678210 ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D 105678299 Rs1; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 105667407 ATP-dependent DNA helicase DDX31 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D 105668851 Dbp73D; probable ATP-dependent RNA helicase Dbp73D K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D 105677541 ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D 105675534 probable ATP-dependent RNA helicase DDX55 homolog K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D 105668224 Ddx56; probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D 105671997 Mtr4; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D 105671784 Ns1; guanine nucleotide-binding protein-like 3 homolog K14538 NUG1; nuclear GTP-binding protein
D 105676166 Ns2; uncharacterized protein Ns2 K14537 NUG2; nuclear GTP-binding protein
D 105669505 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein
D 105669508 nucleolar GTP-binding protein 1-like K06943 NOG1; nucleolar GTP-binding protein
D 105671482 Ns3; large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
D 105668365 elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D 105676746 probable oligoribonuclease isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 105670948 Rexo5; RNA exonuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 105675054 RNA exonuclease 1 homolog isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 105674583 pcm; 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 105677838 Rat1; 5'-3' exoribonuclease 2 homolog isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D RNase MRP
E 105677269 Pop1; ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E 105673687 Pop4; ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E 105678816 Pop5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E 105675966 Rpp30; ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E 105672779 Rpp20; ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
E 105673963 Rpp25; ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 105672354 uncharacterized protein K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
E 105676605 ribonuclease P protein subunit p40-like isoform X1 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Kinases
D 105671722 polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D 105671313 ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D 105667856 dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5
D 105675193 eIF6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D 105675460 heat shock 70 kDa protein cognate 4 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 105679998 heat shock 70 kDa protein cognate 4 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 105669511 RpLP0-like; mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4
D 105677711 Nmd3; 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D 105668959 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
D 105679408 sbr; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
D 105679875 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
D 105670025 Nxt1; NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2
D 105673799 Ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 105667836 cytoplasmic 60S subunit biogenesis factor ZNF622 K14816 REI1; pre-60S factor REI1
D 105677596 Sbds; ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1
D 105671577 ATPase family gene 2 protein homolog A K14575 AFG2; AAA family ATPase
D 105673054 cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 105678254 uncharacterized protein K26053 C1ORF109; ribosome biogenesis protein C1orf109
D 105673591 emb; exportin-1 K14290 XPO1; exportin-1
D 105676367 Fs(2)Ket; importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1
D 105680096 Tnpo; transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 105675597 importin-4-like K20221 IPO4; importin-4
D 105668769 Karybeta3; importin-5 K20222 IPO5; importin-5
D 105670046 msk; importin-7 K20223 IPO7; importin-7
D 105671460 Ipo9; importin-9 isoform X1 K20224 IPO9; importin-9
D 105670184 dual specificity protein phosphatase MPK-4 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D 105677071 testis-expressed protein 10 homolog K14827 IPI1; pre-rRNA-processing protein IPI1
D 105668853 WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3
D 105670341 ribosomal biogenesis protein LAS1L isoform X1 K16912 LAS1; ribosomal biogenesis protein LAS1
D 105677343 proline-, glutamic acid- and leucine-rich protein 1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1
C Ribosome quality control proteins
D 105673694 Ltn1; E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D 105675464 Nulp1; ribosome quality control complex subunit TCF25 K24970 TCF25; transcription factor 25
D 105672662 Clbn; ribosome quality control complex subunit NEMF homolog K24971 NEMF; nuclear export mediator factor NEMF
D 105677015 TER94; transitional endoplasmic reticulum ATPase TER94 K13525 VCP; transitional endoplasmic reticulum ATPase
D 105678772 Npl4; nuclear protein localization protein 4 homolog isoform X1 K14015 NPLOC4; nuclear protein localization protein 4
D 105671328 Ufd1; ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1
D 105671697 putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29]
D 105674536 tRNA endonuclease ANKZF1 isoform X1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D 105676706 ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1
D 105675947 zinc finger protein 593 homolog K14821 BUD20; bud site selection protein 20
D 105670838 coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1
D 105671845 probable rRNA-processing protein EBP2 homolog K14823 EBP2; rRNA-processing protein EBP2
D 105673501 ribosome biogenesis protein BOP1 homolog K14824 ERB1; ribosome biogenesis protein ERB1
D 105674544 p21-activated protein kinase-interacting protein 1-like isoform X1 K14830 MAK11; protein MAK11
D 105676110 Rbm13; protein MAK16 homolog B K14831 MAK16; protein MAK16
D 105669140 CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21
D 105669883 CCAAT/enhancer-binding protein zeta-like isoform X1 K14832 MAK21; ribosome biogenesis protein MAK21
D 136999794 CCAAT/enhancer-binding protein zeta-like K14832 MAK21; ribosome biogenesis protein MAK21
D 136999802 CCAAT/enhancer-binding protein zeta-like K14832 MAK21; ribosome biogenesis protein MAK21
D 136999813 CCAAT/enhancer-binding protein zeta-like K14832 MAK21; ribosome biogenesis protein MAK21
D 136999887 CCAAT/enhancer-binding protein zeta-like K14832 MAK21; ribosome biogenesis protein MAK21
D 105678932 midasin K14572 MDN1; midasin
D 105676256 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D 105669379 Noc2; nucleolar complex protein 2 isoform X1 K14833 NOC2; nucleolar complex protein 2
D 105677218 Noc3; nucleolar complex protein 3 isoform X1 K14834 NOC3; nucleolar complex protein 3
D 105671048 uncharacterized protein K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D 105673115 RNA-binding protein 28 K14573 NOP4; nucleolar protein 4
D 105678657 probable RNA-binding protein CG14230 K14836 NOP8; nucleolar protein 8
D 105668741 uncharacterized protein isoform X1 K14837 NOP12; nucleolar protein 12
D 105668745 repetitive organellar protein K14837 NOP12; nucleolar protein 12
D 105678994 MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15
D 105675577 ribosome biogenesis protein NOP53 K14840 NOP53; nucleolar protein 53
D 105676681 WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1
D 136997392 WD repeat-containing protein 74-like K14841 NSA1; ribosome biogenesis protein NSA1
D 137000268 WD repeat-containing protein 74-like K14841 NSA1; ribosome biogenesis protein NSA1
D 105670922 Ip259; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2
D 105678721 pelo; pescadillo homolog isoform X1 K14843 PES1; pescadillo
D 105678780 peng; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
D 105672010 nclb; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 105669306 decapping and exoribonuclease protein isoform X1 K14845 RAI1; RAT1-interacting protein
D 105669320 decapping and exoribonuclease protein-like isoform X1 K14845 RAI1; RAT1-interacting protein
D 136996845 decapping and exoribonuclease protein-like K14845 RAI1; RAT1-interacting protein
D 105669936 NO66; ribosomal oxygenase 1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
D 105667516 smid; nuclear valosin-containing protein-like isoform X1 K14571 RIX7; ribosome biogenesis ATPase
D 105671680 probable ribosome production factor 1 K14846 RPF1; ribosome production factor 1
D 105679983 Non3; ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2
D 105677502 l(2)09851; glutamate-rich WD repeat-containing protein 1 isoform X1 K14848 RRB1; ribosome assembly protein RRB1
D 105668343 ribosomal RNA-processing protein 8 isoform X1 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D 105676762 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 105674102 nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17
D 105675301 ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis
D 105668313 Nle; notchless protein homolog 1 K14855 RSA4; ribosome assembly protein 4
D 105670322 Mys45A; protein SDA1 homolog K14856 SDA1; protein SDA1
D 105674818 pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D 105679599 protein Peter pan K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D 105671958 translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16
D 105670577 nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D 105673250 ribosome biogenesis protein WDR12 homolog K14863 WDR12; ribosome biogenesis protein
D 105670636 Nufip; FMR1-interacting protein NUFIP1 isoform X1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1
D 105673183 zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C 105676294 protein BCCIP homolog K15262 BCP1; protein BCP1
C 105672834 cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein
C 105673109 l(2)10685; 5-methylcytosine rRNA methyltransferase NSUN4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
C 105670582 Nsun5; 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C 105672675 mtTFB1; mitochondrial dimethyladenosine transferase 1 K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-]
C 105674462 Samtor; S-adenosylmethionine sensor upstream of mTORC1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C 105672806 rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-]
C 105672425 rRNA N6-adenosine-methyltransferase ZCCHC4 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-]
C 105677656 Dbp21E2; probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
C 105667906 ath; ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6]
C 105672210 JMJD5; bifunctional peptidase and arginyl-hydroxylase JMJD5 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
C 105673238 GTPase Era, mitochondrial K03595 era; GTPase
C 105677678 proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein
C 105672037 ribosome assembly protein METTL17, mitochondrial K27906 METTL17; ribosome assembly protein METTL17/RSM22, mitochondrial
C 105679597 mitochondrial ribosome-associated GTPase 2 isoform X1 K03979 obgE; GTPase [EC:3.6.5.-]
C 105671229 nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 105667721 Nop56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 105668764 RpL7A; large ribosomal subunit protein eL8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D 105678502 Nop60B; H/ACA ribonucleoprotein complex subunit 4 isoform X2 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 105674118 Nop10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
D 105674744 Mrm2; rRNA methyltransferase 2, mitochondrial isoform X1 K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
B ribosomal protein modification factors
B rRNA processing factors
C 105668156 drosha; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C 105673238 GTPase Era, mitochondrial K03595 era; GTPase
C 105679597 mitochondrial ribosome-associated GTPase 2 isoform X1 K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C 105672382 Tcs1; threonylcarbamoyl-AMP synthase isoform X1 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025