+D GENES KO
#
KEGG Orthology (KO) - Lactobacillus iners
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lid00010]
D GYK47_00895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYK47_02250 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYK47_04315 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYK47_00290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYK47_00280 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYK47_00285 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GYK47_04915 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYK47_00295 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_01690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_02245 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYK47_06415 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_00385 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_03635 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D GYK47_00225 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYK47_04735 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle)
C 00030 Pentose phosphate pathway [PATH:lid00030]
D GYK47_00895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYK47_03795 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GYK47_00105 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D GYK47_05365 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GYK47_01195 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYK47_01285 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GYK47_00225 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYK47_05680 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYK47_05990 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYK47_04315 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYK47_02250 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:lid00040]
D GYK47_01370 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYK47_01195 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:lid00051]
D GYK47_00875 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GYK47_02250 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYK47_04930 hypothetical protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D GYK47_01470 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D GYK47_04315 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYK47_00290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYK47_05800 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYK47_01570 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYK47_05140 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GYK47_05135 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYK47_01580 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYK47_05130 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D GYK47_01585 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYK47_00110 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
C 00052 Galactose metabolism [PATH:lid00052]
D GYK47_03625 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYK47_01370 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYK47_00225 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYK47_02250 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYK47_04330 DUF4968 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D GYK47_05070 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:lid00500]
D GYK47_04330 DUF4968 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D GYK47_05070 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D GYK47_01370 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYK47_05925 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYK47_01670 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D GYK47_01695 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D GYK47_05065 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D GYK47_05060 glycoside hydrolase family 65 protein K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D GYK47_05055 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D GYK47_04735 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYK47_04750 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYK47_04755 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D GYK47_00225 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYK47_00895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lid00520]
D GYK47_04735 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYK47_05795 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D GYK47_05310 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D GYK47_03525 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GYK47_05985 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GYK47_04890 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYK47_03560 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYK47_01350 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GYK47_00225 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYK47_01370 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYK47_03625 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYK47_05800 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYK47_01570 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYK47_05140 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GYK47_05135 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYK47_01580 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYK47_05130 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D GYK47_01585 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYK47_00895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYK47_00875 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:lid00620]
D GYK47_03635 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D GYK47_03630 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYK47_03575 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYK47_02245 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYK47_06415 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_00385 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lid00630]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYK47_01650 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00640 Propanoate metabolism [PATH:lid00640]
D GYK47_03630 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYK47_03575 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYK47_06415 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_00385 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:lid00650]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYK47_03635 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D GYK47_00375 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D GYK47_00290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lid00190]
D GYK47_00985 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GYK47_00980 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GYK47_00970 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GYK47_00955 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GYK47_00960 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GYK47_01675 HAD-IC family P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D GYK47_02080 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lid00710]
D GYK47_00285 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GYK47_00280 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYK47_04315 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYK47_01285 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GYK47_00290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYK47_01195 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:lid00720]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYK47_02035 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GYK47_02790 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GYK47_03575 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYK47_03630 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:lid00680]
D GYK47_00295 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_01690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_04315 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYK47_02250 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYK47_03630 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYK47_03575 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYK47_04915 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism
D GYK47_01650 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00920 Sulfur metabolism
D GYK47_03785 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D GYK47_02970 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lid00071]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYK47_03635 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lid00561]
D GYK47_04155 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D GYK47_04165 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D GYK47_02975 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GYK47_04945 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYK47_02095 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYK47_02700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GYK47_00510 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GYK47_04490 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D GYK47_00890 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:lid00564]
D GYK47_00215 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GYK47_04945 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYK47_02095 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYK47_02700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GYK47_00415 tagD; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D GYK47_00510 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GYK47_02665 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GYK47_00150 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D GYK47_05655 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lid00230]
D GYK47_02905 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GYK47_00225 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYK47_05680 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYK47_05990 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYK47_03925 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GYK47_02460 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GYK47_01330 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D GYK47_00460 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GYK47_02865 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GYK47_03735 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GYK47_06300 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D GYK47_06305 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GYK47_03935 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D GYK47_05545 amidohydrolase family protein K01487 guaD; guanine deaminase [EC:3.5.4.3]
D GYK47_05490 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GYK47_05500 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYK47_05875 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GYK47_05300 deoxynucleoside kinase K25641 dgk2; deoxyguanosine kinase [EC:2.7.1.113]
D GYK47_00085 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D GYK47_03930 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GYK47_05305 deoxynucleoside kinase K10353 E2.7.1.76; deoxyadenosine kinase [EC:2.7.1.76]
D GYK47_06105 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:lid00240]
D GYK47_03860 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYK47_02055 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYK47_03865 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYK47_02050 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYK47_03885 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D GYK47_03900 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GYK47_03895 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GYK47_02680 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GYK47_04895 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GYK47_02200 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GYK47_01205 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D GYK47_00950 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYK47_03880 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYK47_05875 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GYK47_05490 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GYK47_05500 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYK47_04075 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GYK47_06220 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GYK47_00930 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D GYK47_02455 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lid00250]
D GYK47_04020 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D GYK47_05110 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D GYK47_05860 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GYK47_03930 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GYK47_03925 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GYK47_01650 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYK47_03860 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYK47_02055 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYK47_03865 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYK47_02050 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
C 00260 Glycine, serine and threonine metabolism [PATH:lid00260]
D GYK47_04915 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYK47_02310 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GYK47_02315 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:lid00270]
D GYK47_04440 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GYK47_02895 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D GYK47_06370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYK47_04005 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GYK47_06415 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_00385 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_02310 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D GYK47_02315 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:lid00280]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYK47_00375 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:lid00300]
D GYK47_06485 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D GYK47_04025 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYK47_06390 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:lid00220]
D GYK47_01650 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYK47_03860 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYK47_02055 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYK47_03865 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYK47_02050 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
C 00330 Arginine and proline metabolism
D GYK47_05535 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D GYK47_03635 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:lid00430]
D GYK47_03575 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYK47_03630 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lid00450]
D GYK47_00220 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GYK47_05955 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D GYK47_05110 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:lid00470]
D GYK47_05770 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYK47_05265 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYK47_05255 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYK47_03740 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GYK47_04020 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 00480 Glutathione metabolism [PATH:lid00480]
D GYK47_01605 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GYK47_05365 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GYK47_03795 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:lid00542]
D GYK47_00165 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lid00541]
D GYK47_01370 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYK47_03625 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYK47_00875 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GYK47_05985 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GYK47_01350 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lid00550]
D GYK47_04890 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYK47_03560 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYK47_04240 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GYK47_04025 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYK47_05770 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYK47_06390 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GYK47_02670 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GYK47_00100 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYK47_01115 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYK47_01125 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GYK47_04305 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D GYK47_01110 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D GYK47_04325 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYK47_00925 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D GYK47_05085 cobalamin biosynthesis protein CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:lid00552]
D GYK47_00100 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYK47_00165 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D GYK47_00430 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D GYK47_05265 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYK47_05255 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYK47_05260 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYK47_04145 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D GYK47_00890 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D GYK47_04490 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D GYK47_04485 glycosyltransferase family 4 protein K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lid00543]
D GYK47_00165 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lid00730]
D GYK47_02890 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_01040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_01045 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GYK47_01190 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GYK47_06105 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:lid00740]
D GYK47_02605 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D GYK47_05015 NAD(P)H-dependent oxidoreductase K22393 nfr1; flavin reductase (NADH) subunit 1 [EC:1.5.1.36]
D GYK47_05010 NAD(P)H-dependent oxidoreductase K22394 nfr2; flavin reductase (NADH) subunit 2 [EC:1.5.1.36]
D GYK47_02905 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:lid00750]
D GYK47_06475 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lid00760]
D GYK47_00445 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D GYK47_01490 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D GYK47_00450 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D GYK47_00090 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:lid00770]
D GYK47_04810 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D GYK47_06505 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D GYK47_02385 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GYK47_01425 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GYK47_06400 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:lid00790]
D GYK47_02885 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D GYK47_02880 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GYK47_02860 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D GYK47_02450 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GYK47_01055 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:lid00670]
D GYK47_02450 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GYK47_02035 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GYK47_02790 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GYK47_01170 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GYK47_02455 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GYK47_01620 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lid00860]
D GYK47_05320 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lid00900]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYK47_00375 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D GYK47_00370 hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D GYK47_01950 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D GYK47_01955 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D GYK47_01945 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D GYK47_02775 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GYK47_02670 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:lid01054]
D GYK47_04020 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D GYK47_04785 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D GYK47_00225 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GYK47_02970 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D GYK47_04440 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:lid00625]
D GYK47_03635 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:lid00626]
D GYK47_03635 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lid03020]
D GYK47_06495 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYK47_06500 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYK47_06130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYK47_01160 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYK47_04900 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lid03010]
D GYK47_02195 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GYK47_02690 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GYK47_06030 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GYK47_01030 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GYK47_06085 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GYK47_05430 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GYK47_04825 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GYK47_06070 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GYK47_06165 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GYK47_05995 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GYK47_06125 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GYK47_04830 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GYK47_06120 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GYK47_06065 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GYK47_02355 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GYK47_02750 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GYK47_06045 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GYK47_05420 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GYK47_06020 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GYK47_02360 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GYK47_01770 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GYK47_06280 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GYK47_06000 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GYK47_06005 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GYK47_06060 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GYK47_06075 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GYK47_06290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GYK47_05410 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GYK47_06285 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GYK47_06275 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GYK47_06160 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GYK47_06050 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GYK47_06095 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GYK47_06035 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GYK47_06135 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GYK47_06080 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GYK47_02735 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GYK47_01460 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GYK47_02820 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GYK47_06025 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GYK47_06010 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GYK47_06055 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GYK47_02815 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GYK47_02995 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GYK47_06040 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GYK47_06090 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GYK47_06385 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GYK47_02265 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GYK47_06260 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYK47_01615 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYK47_05465 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GYK47_01455 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GYK47_06115 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GYK47_03660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_05230 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_04685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_05155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_02600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_04470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_02595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_05150 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_04670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_04465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_03655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_05215 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_03650 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_04665 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_05210 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_02590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_04460 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_05145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lid00970]
D GYK47_04675 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYK47_05220 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYK47_00270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_02555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_01610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_04630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_01340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_03645 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYK47_05205 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYK47_04530 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYK47_02530 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYK47_04605 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYK47_04500 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GYK47_00380 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYK47_00395 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYK47_04505 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYK47_00910 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYK47_04450 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYK47_04545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYK47_00915 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYK47_02565 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_04640 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_06465 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_02520 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_04595 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_05935 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_04510 tRNA-His K14226 tRNA-His; tRNA His
D GYK47_02515 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYK47_04590 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYK47_04680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYK47_05225 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYK47_00465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_02560 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_04635 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_02575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_04495 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_04340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_04650 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_02580 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYK47_04655 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYK47_05555 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYK47_02535 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_04535 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_04610 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_02540 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GYK47_02545 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_04615 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GYK47_04620 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_02525 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYK47_04525 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYK47_04600 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYK47_06470 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYK47_02550 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYK47_04625 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYK47_01680 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_04540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_04585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_04455 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_02510 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_00840 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_05390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_02570 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_04645 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_04935 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_04515 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GYK47_04520 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYK47_00390 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYK47_02585 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYK47_04445 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYK47_04660 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYK47_06230 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYK47_00500 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GYK47_00495 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GYK47_01750 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYK47_01985 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYK47_01800 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GYK47_01805 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GYK47_01445 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYK47_04760 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYK47_06235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYK47_05955 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYK47_01170 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GYK47_01050 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYK47_04430 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYK47_02915 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYK47_06460 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYK47_02655 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYK47_01540 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYK47_05940 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lid03060]
D GYK47_06100 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GYK47_06265 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GYK47_00300 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GYK47_03800 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GYK47_01525 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYK47_00190 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYK47_02755 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYK47_04100 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D GYK47_02930 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYK47_01925 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYK47_02040 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lid04122]
D GYK47_02890 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_01040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_01045 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lid03018]
D GYK47_00295 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_01690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_00305 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GYK47_06395 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYK47_00160 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GYK47_02420 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYK47_02250 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYK47_03825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lid03030]
D GYK47_03565 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYK47_02255 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYK47_04095 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYK47_02365 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYK47_05455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYK47_05405 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GYK47_01810 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GYK47_05425 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYK47_05660 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GYK47_02135 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GYK47_00485 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lid03410]
D GYK47_03580 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GYK47_01420 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GYK47_05520 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GYK47_00485 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lid03420]
D GYK47_00230 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GYK47_02290 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GYK47_04815 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYK47_00480 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYK47_00485 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lid03430]
D GYK47_03755 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D GYK47_03815 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GYK47_04815 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYK47_00480 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYK47_02780 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GYK47_05425 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYK47_02255 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYK47_05455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYK47_04095 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYK47_02365 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYK47_03565 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYK47_00485 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lid03440]
D GYK47_05425 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYK47_05445 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GYK47_01795 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GYK47_04085 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GYK47_00155 recA; recombinase RecA K03553 recA; recombination protein RecA
D GYK47_03810 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GYK47_02980 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GYK47_02425 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GYK47_02255 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYK47_05455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYK47_04095 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYK47_02365 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYK47_03565 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYK47_01165 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lid02010]
D GYK47_03540 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D GYK47_03545 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D GYK47_03550 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D GYK47_03555 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D GYK47_01660 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GYK47_03620 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYK47_05050 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYK47_05045 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D GYK47_05040 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYK47_05035 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYK47_05345 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D GYK47_05330 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D GYK47_05325 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D GYK47_04710 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D GYK47_04705 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GYK47_04690 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYK47_04695 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYK47_03010 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GYK47_03000 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYK47_03005 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYK47_03015 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYK47_01210 ABC transporter substrate-binding protein/permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D GYK47_01215 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D GYK47_05650 ABC transporter substrate-binding protein/permease K17073 lysX1; putative lysine transport system substrate-binding protein
D GYK47_05645 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D GYK47_00340 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GYK47_01710 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D GYK47_01705 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GYK47_00320 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D GYK47_00330 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D GYK47_00325 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GYK47_03080 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYK47_05595 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYK47_06150 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYK47_06140 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYK47_06145 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYK47_04225 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GYK47_05725 ABC transporter permease subunit K20460 nukE; lantibiotic transport system permease protein
D GYK47_05730 ABC transporter permease subunit K20461 nukG; lantibiotic transport system permease protein
D GYK47_05720 ATP-binding cassette domain-containing protein K20459 nukF; lantibiotic transport system ATP-binding protein
D GYK47_00860 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D GYK47_02710 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYK47_02705 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYK47_00640 lsa; Lsa family ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:lid02060]
D GYK47_04195 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GYK47_04200 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D GYK47_04735 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYK47_04750 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYK47_05925 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYK47_05800 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYK47_01570 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYK47_05140 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GYK47_05135 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYK47_01580 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYK47_05130 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D GYK47_01585 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYK47_00110 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GYK47_04930 hypothetical protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D GYK47_01470 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:lid03070]
D GYK47_06265 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GYK47_00300 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GYK47_06100 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GYK47_03800 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GYK47_01525 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYK47_00190 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYK47_02930 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYK47_02755 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lid02020]
D GYK47_04710 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D GYK47_05585 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GYK47_05565 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYK47_05560 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D GYK47_00860 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D GYK47_00855 HAMP domain-containing histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D GYK47_00850 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D GYK47_05265 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYK47_05260 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYK47_05255 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYK47_01520 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D GYK47_01515 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D GYK47_04225 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GYK47_01650 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYK47_01595 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GYK47_01350 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lid02024]
D GYK47_03980 hypothetical protein K20276 bapA; large repetitive protein
D GYK47_00820 YSIRK-type signal peptide-containing protein K20276 bapA; large repetitive protein
D GYK47_04185 iny; cholesterol-dependent cytolysin inerolysin K11031 slo; thiol-activated cytolysin
D GYK47_02945 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYK47_02955 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GYK47_02950 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GYK47_02965 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GYK47_02960 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GYK47_01525 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYK47_06265 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GYK47_00300 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GYK47_06100 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GYK47_03800 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GYK47_00190 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYK47_02930 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYK47_02755 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lid02040]
D GYK47_01815 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GYK47_01595 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GYK47_00295 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_01690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lid01501]
D GYK47_04785 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D GYK47_04305 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:lid01502]
D GYK47_05770 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYK47_06390 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GYK47_01115 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYK47_01125 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lid01503]
D GYK47_05585 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GYK47_05265 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYK47_05260 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYK47_05255 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lid01000]
C 01001 Protein kinases [BR:lid01001]
D GYK47_05565 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYK47_00855 HAMP domain-containing histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D GYK47_01520 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lid01009]
D GYK47_04005 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GYK47_02250 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYK47_01180 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lid01002]
D GYK47_02040 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GYK47_04835 peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GYK47_06215 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D GYK47_04955 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D GYK47_06305 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GYK47_05860 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GYK47_06180 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D GYK47_02470 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D GYK47_02925 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D GYK47_05025 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D GYK47_05290 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D GYK47_01605 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GYK47_04150 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D GYK47_05890 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D GYK47_03705 pepV; dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D GYK47_01830 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D GYK47_01360 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GYK47_02810 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GYK47_06450 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GYK47_05610 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D GYK47_02660 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GYK47_05585 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GYK47_04325 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYK47_00265 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GYK47_01600 Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D GYK47_02380 PDZ domain-containing protein K07177 K07177; Lon-like protease
D GYK47_02725 transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYK47_01925 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYK47_05535 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D GYK47_02145 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GYK47_02110 hslV; HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
C 01003 Glycosyltransferases [BR:lid01003]
D GYK47_04490 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D GYK47_04485 glycosyltransferase family 4 protein K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D GYK47_04305 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D GYK47_00430 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D GYK47_00165 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lid01005]
D GYK47_00165 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lid01011]
D GYK47_04890 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYK47_03560 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYK47_04240 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GYK47_04025 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYK47_05770 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYK47_03740 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GYK47_01115 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYK47_01125 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GYK47_00100 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYK47_04305 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D GYK47_01110 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D GYK47_04325 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYK47_02470 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
C 01004 Lipid biosynthesis proteins [BR:lid01004]
D GYK47_02975 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GYK47_04945 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYK47_02095 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYK47_02700 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lid01008]
D GYK47_04020 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:lid01006]
D GYK47_02775 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GYK47_02670 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GYK47_01645 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:lid01007]
D GYK47_06230 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYK47_05940 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GYK47_06235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYK47_05955 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYK47_02915 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYK47_01050 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYK47_04430 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYK47_06460 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYK47_01750 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYK47_01985 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYK47_01800 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GYK47_01805 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GYK47_04760 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYK47_02655 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYK47_01445 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYK47_01540 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYK47_06485 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lid00194]
D GYK47_00985 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GYK47_00980 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GYK47_00970 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GYK47_00960 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GYK47_00955 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lid03000]
D GYK47_06370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYK47_03710 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYK47_00870 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYK47_05980 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D GYK47_01865 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D GYK47_00790 helix-turn-helix domain-containing protein K07729 K07729; putative transcriptional regulator
D GYK47_00585 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D GYK47_04980 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYK47_04990 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYK47_00670 hypothetical protein K03402 argR; transcriptional regulator of arginine metabolism
D GYK47_02495 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D GYK47_00275 hypothetical protein K05311 cggR; central glycolytic genes regulator
D GYK47_03880 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYK47_01430 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D GYK47_01095 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lid03021]
D GYK47_06130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYK47_06495 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYK47_06500 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYK47_04900 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D GYK47_01160 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYK47_01815 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GYK47_06250 RNA polymerase subunit sigma-70 K27000 sigH; RNA polymerase sigma-H factor
D GYK47_01595 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GYK47_02640 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GYK47_02795 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GYK47_06270 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GYK47_05910 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GYK47_01555 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:lid03019]
D GYK47_02940 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYK47_02420 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYK47_00160 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GYK47_00305 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GYK47_04285 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D GYK47_06395 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYK47_03780 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D GYK47_00295 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_01690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_02250 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYK47_03825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYK47_00240 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:lid03011]
D GYK47_02195 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GYK47_02690 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GYK47_06030 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GYK47_01030 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GYK47_06085 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GYK47_05430 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GYK47_04825 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GYK47_06070 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GYK47_06165 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GYK47_05995 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GYK47_06125 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GYK47_04830 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GYK47_06120 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GYK47_06065 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GYK47_02355 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GYK47_02750 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GYK47_06045 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GYK47_05420 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GYK47_06020 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GYK47_02360 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GYK47_01770 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GYK47_06280 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GYK47_06000 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GYK47_06005 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GYK47_06060 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GYK47_06075 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GYK47_05410 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GYK47_06285 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GYK47_06275 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GYK47_06290 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GYK47_06160 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GYK47_06050 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GYK47_06095 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GYK47_06035 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GYK47_06135 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GYK47_06080 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GYK47_02735 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GYK47_01460 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GYK47_02820 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GYK47_06025 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GYK47_06010 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GYK47_06055 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GYK47_02815 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GYK47_02995 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GYK47_06040 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GYK47_06090 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GYK47_06385 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GYK47_02265 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GYK47_06260 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYK47_01615 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYK47_05465 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GYK47_01455 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GYK47_06115 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GYK47_03650 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_04665 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_05210 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_02590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_04460 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_05145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_03660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_05230 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_04685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_05155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_02600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_04470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_02595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_05150 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_04670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_04465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_03655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_05215 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lid03009]
D GYK47_02940 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYK47_01790 GTPase Era K03595 era; GTPase
D GYK47_02285 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D GYK47_02640 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GYK47_02795 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GYK47_06270 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GYK47_04995 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GYK47_01100 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GYK47_04060 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GYK47_02770 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D GYK47_06245 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GYK47_05590 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GYK47_02215 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GYK47_04310 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYK47_00095 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYK47_02045 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYK47_04045 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GYK47_02745 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D GYK47_03765 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GYK47_06240 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D GYK47_06395 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYK47_03780 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D GYK47_01190 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GYK47_02190 ribosome biogenesis GTPase Der K03977 engA; GTPase
D GYK47_02140 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D GYK47_03910 hflX; GTPase HflX K03665 hflX; GTPase
D GYK47_00945 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GYK47_02615 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D GYK47_02645 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D GYK47_01500 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D GYK47_01785 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D GYK47_00185 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D GYK47_04970 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D GYK47_01510 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lid03016]
D GYK47_02275 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D GYK47_02165 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D GYK47_02655 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYK47_02915 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYK47_04430 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYK47_05955 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYK47_06460 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYK47_01750 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYK47_01985 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYK47_01445 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYK47_04760 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYK47_06235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYK47_01050 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYK47_01540 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYK47_05940 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GYK47_01740 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D GYK47_04270 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYK47_05695 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYK47_05745 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYK47_04255 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D GYK47_06155 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GYK47_02610 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GYK47_02890 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_01040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_00945 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GYK47_01645 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GYK47_05480 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GYK47_05485 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GYK47_05470 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GYK47_02020 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D GYK47_01800 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GYK47_01805 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GYK47_06230 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYK47_01720 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D GYK47_04105 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D GYK47_06455 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D GYK47_02120 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D GYK47_02740 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GYK47_00120 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D GYK47_01530 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D GYK47_01045 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GYK47_06445 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D GYK47_04050 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D GYK47_04040 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GYK47_03570 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GYK47_01505 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D GYK47_00305 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:lid03012]
D GYK47_02620 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GYK47_01450 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GYK47_03840 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GYK47_02685 elongation factor Ts K02357 tsf; elongation factor Ts
D GYK47_02340 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GYK47_04820 fusA; elongation factor G K02355 fusA; elongation factor G
D GYK47_00935 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GYK47_02675 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D GYK47_00940 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GYK47_06420 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GYK47_06110 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D GYK47_02805 efp; elongation factor P K02356 efp; elongation factor P
D GYK47_04805 efp; elongation factor P K02356 efp; elongation factor P
D GYK47_00195 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D GYK47_01405 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lid03110]
D GYK47_06490 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D GYK47_04205 AAA domain-containing protein K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D GYK47_02105 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D GYK47_03825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYK47_02480 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GYK47_02490 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GYK47_03830 co-chaperone GroES K04078 groES; chaperonin GroES
D GYK47_05585 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GYK47_06450 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GYK47_00955 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GYK47_04280 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D GYK47_03750 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:lid04131]
D GYK47_00280 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYK47_04915 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYK47_02245 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lid03032]
D GYK47_05660 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GYK47_06370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYK47_02185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYK47_05405 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GYK47_01810 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GYK47_01435 RepA leader peptide Tap K03346 dnaB; replication initiation and membrane attachment protein
D GYK47_01440 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D GYK47_05425 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYK47_02255 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYK47_05455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYK47_02365 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYK47_03565 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYK47_04095 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYK47_02135 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GYK47_00485 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GYK47_05440 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GYK47_02085 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:lid03036]
D GYK47_06370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYK47_02940 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYK47_02185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYK47_01255 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D GYK47_02225 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D GYK47_02220 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D GYK47_06435 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D GYK47_01105 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D GYK47_01130 cell division protein K03589 ftsQ; cell division protein FtsQ
D GYK47_02400 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D GYK47_01140 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYK47_01035 septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D GYK47_02920 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D GYK47_01145 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D GYK47_01000 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYK47_01070 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYK47_01080 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D GYK47_01015 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D GYK47_04985 ParA family protein K03496 parA; chromosome partitioning protein
D GYK47_04980 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYK47_04990 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYK47_02085 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GYK47_05485 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GYK47_04995 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GYK47_02120 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D GYK47_02235 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D GYK47_02325 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D GYK47_00250 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lid03400]
D GYK47_03580 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GYK47_06220 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GYK47_01420 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GYK47_05520 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GYK47_00485 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GYK47_00230 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GYK47_02290 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GYK47_04815 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYK47_00480 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYK47_06495 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYK47_06500 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYK47_06130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYK47_04900 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D GYK47_01160 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYK47_03755 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D GYK47_03815 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GYK47_02780 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GYK47_02255 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYK47_05455 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYK47_02365 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYK47_03565 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYK47_04095 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYK47_05425 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYK47_02425 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GYK47_00155 recA; recombinase RecA K03553 recA; recombination protein RecA
D GYK47_03810 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GYK47_01165 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GYK47_06225 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D GYK47_05445 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GYK47_02980 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GYK47_01795 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GYK47_04085 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GYK47_02765 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GYK47_02005 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D GYK47_05440 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GYK47_02185 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYK47_03790 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GYK47_02725 transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYK47_05490 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GYK47_05500 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GYK47_03785 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lid03029]
D GYK47_02620 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GYK47_01450 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GYK47_02685 elongation factor Ts K02357 tsf; elongation factor Ts
D GYK47_02340 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GYK47_04820 fusA; elongation factor G K02355 fusA; elongation factor G
D GYK47_01790 GTPase Era K03595 era; GTPase
D GYK47_04430 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYK47_01750 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYK47_00500 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GYK47_00495 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GYK47_05425 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYK47_02490 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GYK47_03825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYK47_03830 co-chaperone GroES K04078 groES; chaperonin GroES
D GYK47_02480 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GYK47_02890 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_01040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_01525 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lid02000]
D GYK47_02710 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYK47_02705 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYK47_00640 lsa; Lsa family ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D GYK47_03540 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D GYK47_03545 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D GYK47_03550 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D GYK47_03555 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D GYK47_01660 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GYK47_03620 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYK47_05050 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYK47_05045 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D GYK47_05040 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYK47_05035 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYK47_05345 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D GYK47_05330 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D GYK47_05325 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D GYK47_03600 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D GYK47_00845 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D GYK47_03610 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D GYK47_04710 pstS; phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D GYK47_04705 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GYK47_04690 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYK47_04695 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYK47_03010 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GYK47_03000 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYK47_03005 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYK47_03015 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYK47_01210 ABC transporter substrate-binding protein/permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D GYK47_01215 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D GYK47_00340 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GYK47_01710 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D GYK47_01705 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GYK47_03060 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D GYK47_03055 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D GYK47_03050 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D GYK47_05650 ABC transporter substrate-binding protein/permease K17073 lysX1; putative lysine transport system substrate-binding protein
D GYK47_05645 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D GYK47_02945 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYK47_02955 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GYK47_02950 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GYK47_02965 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GYK47_02960 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GYK47_00320 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D GYK47_00330 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D GYK47_00325 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D GYK47_03080 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYK47_05595 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYK47_06150 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYK47_06140 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYK47_06145 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYK47_03075 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYK47_05605 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D GYK47_06520 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D GYK47_06515 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D GYK47_04225 ABC transporter ATP-binding protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D GYK47_05720 ATP-binding cassette domain-containing protein K20459 nukF; lantibiotic transport system ATP-binding protein
D GYK47_05725 ABC transporter permease subunit K20460 nukE; lantibiotic transport system permease protein
D GYK47_05730 ABC transporter permease subunit K20461 nukG; lantibiotic transport system permease protein
D GYK47_00860 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D GYK47_05825 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D GYK47_05830 ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein
D GYK47_05835 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D GYK47_04260 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D GYK47_04265 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D GYK47_02835 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYK47_03035 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYK47_05175 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYK47_05180 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYK47_05915 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYK47_00905 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYK47_02840 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYK47_03040 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYK47_03920 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYK47_05185 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYK47_05920 metal ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYK47_00900 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYK47_04725 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D GYK47_04720 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYK47_05240 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYK47_01230 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D GYK47_04195 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GYK47_04200 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D GYK47_04735 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYK47_04750 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYK47_05925 PTS lactose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYK47_00110 PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GYK47_05140 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GYK47_05800 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYK47_01570 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYK47_05135 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYK47_01580 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYK47_05130 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D GYK47_01585 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYK47_04165 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D GYK47_04885 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D GYK47_03730 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D GYK47_03505 protein CrcB K06199 crcB; fluoride exporter
D GYK47_03510 CrcB family protein K06199 crcB; fluoride exporter
D GYK47_01325 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYK47_01400 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYK47_06190 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D GYK47_06175 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D GYK47_00525 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D GYK47_05285 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D GYK47_03030 uracil permease K02824 uraA; uracil permease
D GYK47_06295 purine permease K16169 pbuX; xanthine permease
D GYK47_05295 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GYK47_06530 KUP/HAK/KT family potassium transporter K03549 kup; KUP system potassium uptake protein
D GYK47_02205 ECF transporter S component K23675 fmnP; riboflavin transporter
D GYK47_02400 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D GYK47_05395 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D GYK47_01590 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:lid02044]
D GYK47_04835 peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GYK47_01150 YggT family protein K02221 yggT; YggT family protein
D GYK47_02375 competence protein CelA K02237 comEA; competence protein ComEA
D GYK47_02370 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D GYK47_00180 ComF family protein K02242 comFC; competence protein ComFC
D GYK47_03350 prepilin-type N-terminal cleavage/methylation domain-containing protein K02245 comGC; competence protein ComGC
D GYK47_00190 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYK47_06265 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GYK47_00300 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GYK47_06100 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GYK47_02755 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYK47_02930 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYK47_03800 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GYK47_01525 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:lid02042]
D GYK47_04185 iny; cholesterol-dependent cytolysin inerolysin K11031 slo; thiol-activated cytolysin
D GYK47_01325 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYK47_01400 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYK47_02160 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lid02022]
D GYK47_05565 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYK47_05560 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D GYK47_00855 HAMP domain-containing histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D GYK47_00850 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D GYK47_01520 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D GYK47_01515 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
C 02035 Bacterial motility proteins [BR:lid02035]
D GYK47_04835 peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lid04812]
D GYK47_01000 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYK47_01070 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYK47_01140 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYK47_04985 ParA family protein K03496 parA; chromosome partitioning protein
D GYK47_04980 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYK47_04990 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lid04147]
D GYK47_00295 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_01690 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYK47_00280 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYK47_00285 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GYK47_02245 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYK47_03825 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYK47_00895 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYK47_00460 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GYK47_02340 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GYK47_04270 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYK47_05695 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYK47_05745 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYK47_06415 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_00385 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYK47_00365 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYK47_04005 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D GYK47_06105 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GYK47_02460 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GYK47_01650 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYK47_03795 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GYK47_00290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYK47_04915 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lid02048]
D GYK47_01880 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GYK47_01875 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D GYK47_01870 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GYK47_06315 N-6 DNA methylase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GYK47_06370 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GYK47_04175 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D GYK47_04180 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GYK47_04345 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE
D GYK47_00630 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D GYK47_01900 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D GYK47_01915 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D GYK47_00645 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D GYK47_01140 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYK47_01000 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYK47_01070 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYK47_02085 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GYK47_02890 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYK47_01040 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lid01504]
D GYK47_00640 lsa; Lsa family ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D GYK47_04785 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D GYK47_05265 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYK47_05260 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYK47_05255 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lid03100]
D GYK47_04675 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYK47_05220 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYK47_00270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_02555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_01610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_04630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_01340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYK47_03645 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYK47_05205 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYK47_04530 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYK47_02530 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYK47_04605 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYK47_04500 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GYK47_00380 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYK47_00395 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYK47_04505 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYK47_00910 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYK47_04450 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYK47_04545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYK47_00915 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYK47_02565 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_04640 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_06465 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_02520 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_04595 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_05935 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYK47_04510 tRNA-His K14226 tRNA-His; tRNA His
D GYK47_02515 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYK47_04590 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYK47_04680 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYK47_05225 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYK47_00465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_02560 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_04635 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_02575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_04495 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_04340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_04650 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYK47_02580 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYK47_04655 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYK47_05555 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYK47_02535 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_04535 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_04610 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_02540 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GYK47_02545 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_04615 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GYK47_04620 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYK47_02525 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYK47_04525 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYK47_04600 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYK47_06470 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYK47_02550 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYK47_04625 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYK47_01680 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_04540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_04585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_04455 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_02510 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYK47_00840 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_05390 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_02570 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_04645 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_04935 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYK47_04515 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GYK47_04520 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYK47_00390 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYK47_02585 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYK47_04445 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYK47_04660 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYK47_03660 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_05230 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_04685 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_05155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_02600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_04470 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYK47_02595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_05150 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_04670 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_04465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_03655 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_05215 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYK47_03650 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_04665 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_05210 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_02590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_04460 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_05145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYK47_04100 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D GYK47_02020 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D GYK47_03320 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GYK47_03665 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D GYK47_05880 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D GYK47_02025 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D GYK47_04190 nucleoside 2-deoxyribosyltransferase K08728 E2.4.2.6; nucleoside deoxyribosyltransferase [EC:2.4.2.6]
D GYK47_00210 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GYK47_02985 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D GYK47_01765 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D GYK47_03535 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D GYK47_00205 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D GYK47_05200 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D GYK47_05005 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYK47_05080 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYK47_05840 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYK47_01480 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D GYK47_05415 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D GYK47_05960 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GYK47_05965 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D GYK47_02410 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GYK47_04335 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D GYK47_05865 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D GYK47_06350 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D GYK47_00455 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D GYK47_05950 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D GYK47_01245 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D GYK47_02065 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D GYK47_02155 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D GYK47_05495 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D GYK47_04795 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
D GYK47_05095 DNA-entry nuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D GYK47_02230 protein RibT K02859 ribT; riboflavin biosynthesis RibT protein
C 99988 Secondary metabolism
D GYK47_01755 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GYK47_02910 cold shock domain-containing protein K03704 cspA; cold shock protein
D GYK47_00060 Spx/MgsR family RNA polymerase-binding regulatory protein K16509 spxA; regulatory protein spx
C 99974 Translation
C 99975 Protein processing
D GYK47_00310 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D GYK47_00065 competence protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D GYK47_01065 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D GYK47_02695 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D GYK47_02130 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D GYK47_01990 DnaD domain protein K02086 dnaD; DNA replication protein
D GYK47_01025 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D GYK47_01850 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GYK47_00775 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D GYK47_04090 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GYK47_03640 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D GYK47_05120 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D GYK47_05090 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GYK47_05235 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GYK47_05315 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D GYK47_01220 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D GYK47_05530 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D GYK47_00350 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D GYK47_02405 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D GYK47_01275 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D GYK47_01780 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D GYK47_00010 gametolysin K07273 acm; lysozyme
C 99994 Others
D GYK47_00880 SdpI family protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GYK47_00070 competence protein K06198 coiA; competence protein CoiA
D GYK47_04245 DUF4479 and tRNA-binding domain-containing protein K06878 K06878; tRNA-binding protein
D GYK47_05515 noncanonical pyrimidine nucleotidase, YjjG family K07025 K07025; putative hydrolase of the HAD superfamily
D GYK47_01235 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D GYK47_05615 LemA family protein K03744 lemA; LemA protein
D GYK47_03670 hypothetical protein K03975 dedA; membrane-associated protein
D GYK47_05100 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D GYK47_05900 PH domain-containing protein K08981 K08981; putative membrane protein
C 99997 Function unknown
D GYK47_04910 HD domain-containing protein K06885 K06885; uncharacterized protein
D GYK47_01375 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D GYK47_00520 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D GYK47_04015 HD domain-containing protein K06950 K06950; uncharacterized protein
D GYK47_02270 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D GYK47_01005 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D GYK47_01775 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D GYK47_01270 PFL family protein K09157 K09157; uncharacterized protein
D GYK47_02760 transcriptional regulator K09787 K09787; uncharacterized protein
D GYK47_02240 RNA-binding protein K00243 K00243; uncharacterized protein
D GYK47_02715 YneF family protein K09976 K09976; uncharacterized protein
D GYK47_01225 DUF47 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024