+D GENES KO #

  KEGG Orthology (KO) - Lactobacillus johnsonii FI9785

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ljf00010] D FI9785_1286 pgi; pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D FI9785_1130 pfk; pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D FI9785_529 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D FI9785_1334 tpi; tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D FI9785_1336 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D FI9785_1335 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D FI9785_963 pgam; phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_407 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_233 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_1333 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_851 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_1129 pyk; pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D FI9785_1528 hicD; putative L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_337 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_863 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_1548 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D FI9785_1347 unnamed protein product K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D FI9785_1346 pgm; Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D FI9785_216 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D FI9785_1604 bglA4; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D FI9785_270 bglA3; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D FI9785_260 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D FI9785_265 bglA2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] C 00020 Citrate cycle (TCA cycle) [PATH:ljf00020] D FI9785_861 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D FI9785_216 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00030 Pentose phosphate pathway [PATH:ljf00030] D FI9785_1286 pgi; pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D FI9785_486 zwf; zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D FI9785_1375 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D FI9785_1804 gnd; 6-phosphogluconate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D FI9785_730 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D FI9785_1530 rpiA2; rpiA2 K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D FI9785_649 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D FI9785_658 putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D FI9785_1448 unnamed protein product K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D FI9785_648 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D FI9785_1346 pgm; Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D FI9785_163 prs; phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D FI9785_285 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D FI9785_423 gntK; gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12] D FI9785_529 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D FI9785_1130 pfk; pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:ljf00040] D FI9785_672 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D FI9785_730 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:ljf00051] D FI9785_76 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D FI9785_1292 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D FI9785_1130 pfk; pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D FI9785_227 fructose-1-phosphate kinase-like protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D FI9785_1654 fruB; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D FI9785_529 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D FI9785_1334 tpi; tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D FI9785_1653 fruA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probably fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D FI9785_213 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D FI9785_188 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, mannose specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D FI9785_1601 phosphoenolpyruvate-dependent sugar phosphotransferase system, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D FI9785_1723 manL; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probably mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D FI9785_1722 manM; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably mannose specific K02795 manY; mannose PTS system EIIC component D FI9785_1600 hosphoenolpyruvate-dependent sugar phosphotransferase system IIC component K02795 manY; mannose PTS system EIIC component D FI9785_186 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, mannose specific K02795 manY; mannose PTS system EIIC component D FI9785_1721 manN; phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probably mannose specific K02796 manZ; mannose PTS system EIID component D FI9785_1599 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID K02796 manZ; mannose PTS system EIID component D FI9785_187 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, mannose specific K02796 manZ; mannose PTS system EIID component D FI9785_1374 hypothetical protein predicted by Glimmer/Critica K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] C 00052 Galactose metabolism [PATH:ljf00052] D FI9785_1347 unnamed protein product K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D FI9785_1349 galK; galK K00849 galK; galactokinase [EC:2.7.1.6] D FI9785_1348 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D FI9785_1542 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D FI9785_672 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D FI9785_1346 pgm; Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D FI9785_610 unnamed protein product K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D FI9785_609 unnamed protein product K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D FI9785_1172 glf; glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D FI9785_583 melA; alpha-galactosidase, melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D FI9785_1756 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable galactitol specific K02775 gatC; galactitol PTS system EIIC component D FI9785_1755 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably galactitol specific K02775 gatC; galactitol PTS system EIIC component D FI9785_1130 pfk; pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D FI9785_209 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D FI9785_563 lacA; Galactose-6-phosphate isomerase subunit lacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26] D FI9785_564 lacB; galactose-6-phosphate isomerase LacB subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26] D FI9785_573 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85] D FI9785_571 lacF; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, lactose specific K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207] D FI9785_572 lacE; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBC, lactose specific K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207] D FI9785_1708 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D FI9785_1656 aglA; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D FI9785_287 malL; oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D FI9785_582 malL; oligo-1,6-glucosidase (Sucrase-isomaltase) K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D FI9785_183 putative tagatose-6-phosphate aldose/ketose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:ljf00500] D FI9785_1707 scrA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBCA, sucrose specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D FI9785_581 scrA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBCA, lactose specific,sucrose-specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D FI9785_1708 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D FI9785_1656 aglA; alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D FI9785_287 malL; oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D FI9785_1296 inuJ; inulosucrase InuJ K20811 inuJ; inulosucrase [EC:2.4.1.9] D FI9785_672 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D FI9785_267 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, lactose/cellobiose specific K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D FI9785_268 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, lactose/cellobiose specific K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D FI9785_1727 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_1769 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_666 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_269 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_262 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC K02761 celB; cellobiose PTS system EIIC component D FI9785_1604 bglA4; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D FI9785_270 bglA3; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D FI9785_260 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D FI9785_265 bglA2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D FI9785_288 maltogenic amylase or neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D FI9785_582 malL; oligo-1,6-glucosidase (Sucrase-isomaltase) K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D FI9785_289 putative maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8] D FI9785_290 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D FI9785_1346 pgm; Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D FI9785_1286 pgi; pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D FI9785_76 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ljf00520] D FI9785_184 nagA; nagA K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D FI9785_1778 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D FI9785_76 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D FI9785_684 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D FI9785_1314 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D FI9785_284 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D FI9785_1775 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D FI9785_300 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D FI9785_1321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D FI9785_1616 unnamed protein product K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D FI9785_667 wecB; wecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D FI9785_1346 pgm; Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D FI9785_672 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D FI9785_1349 galK; galK K00849 galK; galactokinase [EC:2.7.1.6] D FI9785_1348 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D FI9785_1542 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D FI9785_1172 glf; glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D FI9785_188 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, mannose specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D FI9785_1601 phosphoenolpyruvate-dependent sugar phosphotransferase system, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D FI9785_1723 manL; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probably mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D FI9785_1722 manM; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably mannose specific K02795 manY; mannose PTS system EIIC component D FI9785_1600 hosphoenolpyruvate-dependent sugar phosphotransferase system IIC component K02795 manY; mannose PTS system EIIC component D FI9785_186 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, mannose specific K02795 manY; mannose PTS system EIIC component D FI9785_1721 manN; phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probably mannose specific K02796 manZ; mannose PTS system EIID component D FI9785_1599 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID K02796 manZ; mannose PTS system EIID component D FI9785_187 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, mannose specific K02796 manZ; mannose PTS system EIID component D FI9785_1286 pgi; pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D FI9785_1292 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] C 00620 Pyruvate metabolism [PATH:ljf00620] D FI9785_1548 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D FI9785_1297 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] D FI9785_502 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] D FI9785_1324 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D FI9785_1129 pyk; pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D FI9785_1422 acyP; putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D FI9785_1805 pox; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D FI9785_1528 hicD; putative L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_337 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_863 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_110 ldhD; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D FI9785_861 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D FI9785_926 ppc; ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D FI9785_216 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ljf00630] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_1405 glnA; glutamine-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D FI9785_326 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D FI9785_935 glxK; glxK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] C 00640 Propanoate metabolism [PATH:ljf00640] D FI9785_1297 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] D FI9785_502 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] D FI9785_1324 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D FI9785_1528 hicD; putative L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_337 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_863 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:ljf00650] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_1548 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D FI9785_1561 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D FI9785_1398 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D FI9785_1083 als; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D FI9785_1082 aldB; aldB K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:ljf00660] D FI9785_1083 als; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D FI9785_1082 aldB; aldB K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00562 Inositol phosphate metabolism [PATH:ljf00562] D FI9785_229 Putative oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] D FI9785_1334 tpi; tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ljf00190] D FI9785_1761 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D FI9785_1762 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D FI9785_1270 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D FI9785_1268 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D FI9785_1269 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D FI9785_1271 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D FI9785_1267 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D FI9785_1274 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D FI9785_1272 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D FI9785_1273 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D FI9785_799 aha1; H(+)-transporting ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D FI9785_1010 ppa; putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ljf00710] D FI9785_1335 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D FI9785_1336 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D FI9785_529 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D FI9785_1530 rpiA2; rpiA2 K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D FI9785_649 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D FI9785_1334 tpi; tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D FI9785_730 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D FI9785_926 ppc; ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D FI9785_216 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00720 Other carbon fixation pathways [PATH:ljf00720] D FI9785_926 ppc; ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D FI9785_861 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_994 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D FI9785_713 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D FI9785_964 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D FI9785_1324 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D FI9785_1297 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] D FI9785_502 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:ljf00680] D FI9785_326 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D FI9785_1333 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_851 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_926 ppc; ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D FI9785_529 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D FI9785_1130 pfk; pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D FI9785_1297 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] D FI9785_502 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] D FI9785_1324 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D FI9785_963 pgam; phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_407 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_233 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism D FI9785_1405 glnA; glutamine-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism D FI9785_488 hypothetical protein predicted by Glimmer/Critica K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ljf00061] D FI9785_737 acpP; acpP K02078 acpP; acyl carrier protein D FI9785_1367 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ljf00071] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_1548 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:ljf00121] D FI9785_1052 unnamed protein product K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D FI9785_854 unnamed protein product K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ljf00561] D FI9785_935 glxK; glxK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D FI9785_584 unnamed protein product K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D FI9785_736 plsX; Fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D FI9785_1015 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D FI9785_251 hypothetical protein predicted by Glimmer/Critica K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D FI9785_764 conserved hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D FI9785_1504 putative lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D FI9785_1553 unnamed protein product K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D FI9785_1550 conserved hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D FI9785_1288 hypothetical protein predicted by Glimmer/Critica K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D FI9785_583 melA; alpha-galactosidase, melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:ljf00564] D FI9785_1352 gpsA; gpsA K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D FI9785_1015 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D FI9785_251 hypothetical protein predicted by Glimmer/Critica K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D FI9785_764 conserved hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D FI9785_1524 tagD; tagD K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D FI9785_1504 putative lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D FI9785_1696 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D FI9785_1251 glpQ; glpQ K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D FI9785_510 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D FI9785_771 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D FI9785_607 conserved hypothetical protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D FI9785_1365 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D FI9785_154 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D FI9785_795 cls; cardiolipinsynthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:ljf00600] D FI9785_583 melA; alpha-galactosidase, melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D FI9785_1609 hypothetical protein predicted by Glimmer/Critica K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ljf00230] D FI9785_1223 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D FI9785_1346 pgm; Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D FI9785_163 prs; phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D FI9785_285 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D FI9785_465 purB; purB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D FI9785_793 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D FI9785_539 hprt; hypoxanthine-guanine phosphoribosyltransferase homologue K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D FI9785_662 hpt; hpt K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D FI9785_108 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D FI9785_499 hypothetical protein predicted by Glimmer/Critica K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D FI9785_302 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D FI9785_756 hypothetical protein predicted by Glimmer/Critica K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D FI9785_468 conserved hypothetical protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D FI9785_304 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D FI9785_463 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D FI9785_1629 gmk; putative guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D FI9785_722 gmk; gmk K00942 gmk; guanylate kinase [EC:2.7.4.8] D FI9785_1634 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D FI9785_204 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D FI9785_1780 dgk2; deoxynucleoside kinases 2 K25641 dgk2; deoxyguanosine kinase [EC:2.7.1.113] D FI9785_872 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D FI9785_1380 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D FI9785_464 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D FI9785_1779 dgk1; deoxynucleoside kinase K10353 E2.7.1.76; deoxyadenosine kinase [EC:2.7.1.76] D FI9785_1433 unnamed protein product K01488 add; adenosine deaminase [EC:3.5.4.4] D FI9785_1134 hypothetical protein predicted by Glimmer/Critica K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D FI9785_378 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:ljf00240] D FI9785_998 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D FI9785_923 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D FI9785_997 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D FI9785_922 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D FI9785_920 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D FI9785_921 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D FI9785_918 pyrD; pyrD K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D FI9785_916 pyrE; pyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D FI9785_917 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D FI9785_768 pyrH; pyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22] D FI9785_756 hypothetical protein predicted by Glimmer/Critica K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D FI9785_468 conserved hypothetical protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D FI9785_299 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D FI9785_1120 cmk; cmk K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D FI9785_626 udk; udk K00876 udk; uridine kinase [EC:2.7.1.48] D FI9785_1275 upp; upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D FI9785_919 pyrR2; pyrimidine operon regulator protein PyrR2 K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D FI9785_924 pyrR1; pyrimidine operon regulator protein PyrR1 K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D FI9785_1134 hypothetical protein predicted by Glimmer/Critica K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D FI9785_204 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D FI9785_1634 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D FI9785_275 conserved hypothetical protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D FI9785_450 tmk; tmk K00943 tmk; dTMP kinase [EC:2.7.4.9] D FI9785_415 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D FI9785_1279 tdk; tdk K00857 tdk; thymidine kinase [EC:2.7.1.21] D FI9785_796 thyA; thyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ljf00250] D FI9785_1659 racD; racD K01779 racD; aspartate racemase [EC:5.1.1.13] D FI9785_865 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D FI9785_1715 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D FI9785_202 asnB; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D FI9785_464 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D FI9785_465 purB; purB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D FI9785_920 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D FI9785_1561 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D FI9785_1405 glnA; glutamine-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D FI9785_998 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D FI9785_923 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D FI9785_997 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D FI9785_922 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D FI9785_579 glsA; glsA K01425 glsA; glutaminase [EC:3.5.1.2] D FI9785_684 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:ljf00260] D FI9785_1065 thrA; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D FI9785_1058 asd; asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D FI9785_326 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D FI9785_935 glxK; glxK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D FI9785_963 pgam; phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_407 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_233 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_881 sdhB; L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D FI9785_882 sdhA; L-serine dehydratase, iron-sulfur-dependent,alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00270 Cysteine and methionine metabolism [PATH:ljf00270] D FI9785_1293 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D FI9785_519 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D FI9785_1221 pfs; 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D FI9785_544 hypothetical protein predicted by Glimmer/Critica K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D FI9785_1597 luxS; S-ribosylhomocysteinase, autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D FI9785_1065 thrA; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D FI9785_1058 asd; asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D FI9785_1528 hicD; putative L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_337 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_863 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_881 sdhB; L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D FI9785_882 sdhA; L-serine dehydratase, iron-sulfur-dependent,alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:ljf00280] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_1398 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ljf00290] D FI9785_1083 als; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00300 Lysine biosynthesis [PATH:ljf00300] D FI9785_1065 thrA; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D FI9785_1058 asd; asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D FI9785_1061 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D FI9785_1060 dapB; dapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D FI9785_1066 dapF; dapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D FI9785_1064 lysA; lysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D FI9785_1063 dapD; tetrahydrodipicolinate succinyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89] D FI9785_876 aspC; aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D FI9785_1059 araT; aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D FI9785_1062 hipO; N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D FI9785_1660 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D FI9785_332 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ljf00310] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_1561 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:ljf00220] D FI9785_579 glsA; glsA K01425 glsA; glutaminase [EC:3.5.1.2] D FI9785_1405 glnA; glutamine-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D FI9785_998 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D FI9785_923 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D FI9785_997 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D FI9785_922 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] C 00330 Arginine and proline metabolism [PATH:ljf00330] D FI9785_1797 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D FI9785_956 hypothetical protein predicted by Glimmer/Critica K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D FI9785_117 pepI; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism D FI9785_114 hypothetical protein predicted by Glimmer/Critica K17363 urdA; urocanate reductase [EC:1.3.99.33] C 00350 Tyrosine metabolism [PATH:ljf00350] D FI9785_1548 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D FI9785_1561 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism C 00380 Tryptophan metabolism D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis D FI9785_1700 unnamed protein product K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:ljf00430] D FI9785_1324 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D FI9785_1297 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] D FI9785_502 ackA; ackA K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:ljf00450] D FI9785_1293 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D FI9785_1351 trxB; trxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D FI9785_278 metS; metS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ljf00460] D FI9785_865 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D FI9785_1715 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D FI9785_326 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ljf00470] D FI9785_335 alr; alr K01775 alr; alanine racemase [EC:5.1.1.1] D FI9785_175 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D FI9785_1734 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D FI9785_1732 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D FI9785_579 glsA; glsA K01425 glsA; glutaminase [EC:3.5.1.2] D FI9785_498 murI; murI K01776 murI; glutamate racemase [EC:5.1.1.3] D FI9785_1234 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D FI9785_1773 hypothetical protein predicted by Glimmer/Critica K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D FI9785_1659 racD; racD K01779 racD; aspartate racemase [EC:5.1.1.13] D FI9785_1066 dapF; dapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D FI9785_1064 lysA; lysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:ljf00480] D FI9785_682 pepN; pepN K01256 pepN; aminopeptidase N [EC:3.4.11.2] D FI9785_107 gshR; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D FI9785_1804 gnd; 6-phosphogluconate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D FI9785_486 zwf; zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D FI9785_1797 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:ljf00542] D FI9785_1362 tagO; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ljf00541] D FI9785_672 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D FI9785_1542 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D FI9785_1172 glf; glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D FI9785_1292 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D FI9785_284 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D FI9785_667 wecB; wecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:ljf00550] D FI9785_300 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D FI9785_1321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D FI9785_1451 murC; murC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D FI9785_1234 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D FI9785_1660 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D FI9785_175 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D FI9785_332 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D FI9785_770 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D FI9785_521 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D FI9785_1235 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D FI9785_1233 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D FI9785_985 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D FI9785_1467 pbp2a; Penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D FI9785_1236 pbp_2B; Penicillin-binding protein 2B K08724 pbpB; penicillin-binding protein 2B D FI9785_1414 pbp; Penicillin-binding protein K21465 pbpA; penicillin-binding protein A D FI9785_527 dacA; dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D FI9785_1280 conserved hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D FI9785_1712 hypothetical protein predicted by Glimmer/Critica K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D FI9785_508 putative bifunctional glycosyltransferase/transpeptidase penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B C 00552 Teichoic acid biosynthesis [PATH:ljf00552] D FI9785_521 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D FI9785_1362 tagO; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D FI9785_1523 tarA; teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D FI9785_1516 tagB; hypothetical protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D FI9785_1734 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D FI9785_1732 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D FI9785_1733 dltB; DltB protein involved in the biosynthesis of D-alanyl-lipoteichoic acid K03739 dltB; membrane protein involved in D-alanine export D FI9785_1731 dltD; DltD protein involved in the biosynthesis of D-alanyl-lipoteichoic acid K03740 dltD; D-alanine transfer protein D FI9785_1183 epsA; epsA K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D FI9785_1643 lytR; Membrane-bound protein LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D FI9785_250 hypothetical protein predicted by Glimmer/Critica K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D FI9785_414 hypothetical protein predicted by Glimmer/Critica K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D FI9785_1550 conserved hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D FI9785_1288 hypothetical protein predicted by Glimmer/Critica K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D FI9785_1553 unnamed protein product K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D FI9785_1552 putative glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ljf00543] D FI9785_1362 tagO; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ljf00730] D FI9785_1711 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D FI9785_1220 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1254 NifS/IcsS protein-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1253 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D FI9785_424 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D FI9785_729 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D FI9785_731 thiN; thiN K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D FI9785_378 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ljf00740] D FI9785_782 ribC; riboflavin kinase / FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D FI9785_1677 hypothetical protein predicted by Glimmer/Critica K22393 nfr1; flavin reductase (NADH) subunit 1 [EC:1.5.1.36] D FI9785_1676 hypothetical protein K22394 nfr2; flavin reductase (NADH) subunit 2 [EC:1.5.1.36] D FI9785_1223 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:ljf00750] D FI9785_700 conserved hypothetical protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] C 00760 Nicotinate and nicotinamide metabolism [PATH:ljf00760] D FI9785_1488 pncB; pncB K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D FI9785_1520 nadC; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D FI9785_1430 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D FI9785_1519 nadE; NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D FI9785_152 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D FI9785_1379 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D FI9785_1561 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:ljf00770] D FI9785_1083 als; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D FI9785_1608 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D FI9785_1306 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D FI9785_1206 coaD; coaD K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D FI9785_1444 coaE; coaE K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D FI9785_334 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:ljf00780] D FI9785_1367 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:ljf00790] D FI9785_797 dfrA; dfrA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D FI9785_1248 folC; folC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] C 00670 One carbon pool by folate [PATH:ljf00670] D FI9785_797 dfrA; dfrA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D FI9785_994 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D FI9785_713 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D FI9785_964 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D FI9785_326 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D FI9785_725 fmt; fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D FI9785_796 thyA; thyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] D FI9785_1411 unnamed protein product K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D FI9785_1412 unnamed protein product K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ljf00130] D FI9785_116 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D FI9785_1108 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D FI9785_1765 conserved hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D FI9785_400 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ljf00900] D FI9785_424 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_1398 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D FI9785_1399 mvaA; 3-hydroxy-3-methylglutaryl coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D FI9785_975 mvk; mvk K00869 MVK; mevalonate kinase [EC:2.7.1.36] D FI9785_973 pmvk; phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D FI9785_974 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D FI9785_972 idi; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D FI9785_716 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D FI9785_770 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:ljf01054] D FI9785_1659 racD; racD K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D FI9785_1697 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] D FI9785_1774 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] D FI9785_1567 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:ljf00261] D FI9785_1065 thrA; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D FI9785_1058 asd; asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D FI9785_1061 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D FI9785_1060 dapB; dapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis D FI9785_1346 pgm; Phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D FI9785_1367 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D FI9785_737 acpP; acpP K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D FI9785_519 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ljf00362] D FI9785_702 xylH; putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D FI9785_1546 hypothetical protein predicted by Glimmer/Critica K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D FI9785_1422 acyP; putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:ljf00625] D FI9785_1548 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D FI9785_702 xylH; putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D FI9785_702 xylH; putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:ljf00626] D FI9785_1548 adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ljf03020] D FI9785_350 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D FI9785_351 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D FI9785_383 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D FI9785_723 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D FI9785_298 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ljf03010] D FI9785_1119 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D FI9785_766 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D FI9785_363 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D FI9785_1256 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D FI9785_374 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D FI9785_69 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D FI9785_354 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D FI9785_371 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D FI9785_390 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D FI9785_356 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D FI9785_382 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D FI9785_353 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D FI9785_381 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D FI9785_370 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D FI9785_240 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D FI9785_1200 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D FI9785_751 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D FI9785_366 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D FI9785_71 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D FI9785_361 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D FI9785_1201 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D FI9785_885 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D FI9785_431 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D FI9785_360 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D FI9785_357 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D FI9785_358 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D FI9785_369 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D FI9785_372 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D FI9785_437 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D FI9785_74 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D FI9785_436 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D FI9785_430 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D FI9785_389 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D FI9785_367 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D FI9785_376 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D FI9785_364 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D FI9785_384 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D FI9785_373 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D FI9785_754 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D FI9785_1434 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D FI9785_707 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D FI9785_362 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D FI9785_359 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D FI9785_368 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D FI9785_708 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D FI9785_732 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D FI9785_365 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D FI9785_375 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D FI9785_331 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D FI9785_1135 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D FI9785_1413 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D FI9785_427 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D FI9785_1810 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D FI9785_1435 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D FI9785_380 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D FI9785_1813 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1815 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1816 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1814 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_45 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_19 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_1 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_27 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_18 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_26 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_48 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_30 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ljf00970] D FI9785_7 FI9785_7 K14218 tRNA-Ala; tRNA Ala D FI9785_50 FI9785_50 K14219 tRNA-Arg; tRNA Arg D FI9785_11 FI9785_11 K14219 tRNA-Arg; tRNA Arg D FI9785_10 FI9785_10 K14219 tRNA-Arg; tRNA Arg D FI9785_44 FI9785_44 K14219 tRNA-Arg; tRNA Arg D FI9785_29 FI9785_29 K14220 tRNA-Asn; tRNA Asn D FI9785_54 FI9785_54 K14220 tRNA-Asn; tRNA Asn D FI9785_41 FI9785_41 K14220 tRNA-Asn; tRNA Asn D FI9785_20 FI9785_20 K14221 tRNA-Asp; tRNA Asp D FI9785_8 FI9785_8 K14221 tRNA-Asp; tRNA Asp D FI9785_37 FI9785_37 K14222 tRNA-Cys; tRNA Cys D FI9785_2 FI9785_2 K14223 tRNA-Gln; tRNA Gln D FI9785_34 FI9785_34 K14223 tRNA-Gln; tRNA Gln D FI9785_39 FI9785_39 K14223 tRNA-Gln; tRNA Gln D FI9785_60 FI9785_60 K14223 tRNA-Gln; tRNA Gln D FI9785_13 FI9785_13 K14224 tRNA-Glu; tRNA Glu D FI9785_17 FI9785_17 K14224 tRNA-Glu; tRNA Glu D FI9785_49 FI9785_49 K14224 tRNA-Glu; tRNA Glu D FI9785_42 FI9785_42 K14225 tRNA-Gly; tRNA Gly D FI9785_5 FI9785_5 K14225 tRNA-Gly; tRNA Gly D FI9785_56 FI9785_56 K14225 tRNA-Gly; tRNA Gly D FI9785_21 FI9785_21 K14225 tRNA-Gly; tRNA Gly D FI9785_57 FI9785_57 K14226 tRNA-His; tRNA His D FI9785_4 FI9785_4 K14227 tRNA-Ile; tRNA Ile D FI9785_55 FI9785_55 K14227 tRNA-Ile; tRNA Ile D FI9785_61 FI9785_61 K14228 tRNA-Leu; tRNA Leu D FI9785_36 FI9785_36 K14228 tRNA-Leu; tRNA Leu D FI9785_9 FI9785_9 K14228 tRNA-Leu; tRNA Leu D FI9785_31 FI9785_31 K14228 tRNA-Leu; tRNA Leu D FI9785_24 FI9785_24 K14228 tRNA-Leu; tRNA Leu D FI9785_6 FI9785_6 K14229 tRNA-Lys; tRNA Lys D FI9785_58 FI9785_58 K14229 tRNA-Lys; tRNA Lys D FI9785_32 FI9785_32 K14230 tRNA-Met; tRNA Met D FI9785_59 FI9785_59 K14230 tRNA-Met; tRNA Met D FI9785_40 FI9785_40 K14230 tRNA-Met; tRNA Met D FI9785_43 FI9785_43 K14230 tRNA-Met; tRNA Met D FI9785_12 FI9785_12 K14231 tRNA-Phe; tRNA Phe D FI9785_47 FI9785_47 K14231 tRNA-Phe; tRNA Phe D FI9785_23 FI9785_23 K14232 tRNA-Pro; tRNA Pro D FI9785_63 FI9785_63 K14232 tRNA-Pro; tRNA Pro D FI9785_28 FI9785_28 K14233 tRNA-Ser; tRNA Ser D FI9785_38 FI9785_38 K14233 tRNA-Ser; tRNA Ser D FI9785_14 FI9785_14 K14233 tRNA-Ser; tRNA Ser D FI9785_16 FI9785_16 K14233 tRNA-Ser; tRNA Ser D FI9785_51 FI9785_51 K14234 tRNA-Thr; tRNA Thr D FI9785_35 FI9785_35 K14234 tRNA-Thr; tRNA Thr D FI9785_53 FI9785_53 K14234 tRNA-Thr; tRNA Thr D FI9785_46 FI9785_46 K14234 tRNA-Thr; tRNA Thr D FI9785_25 FI9785_25 K14234 tRNA-Thr; tRNA Thr D FI9785_62 FI9785_62 K14235 tRNA-Trp; tRNA Trp D FI9785_15 FI9785_15 K14235 tRNA-Trp; tRNA Trp D FI9785_3 FI9785_3 K14236 tRNA-Tyr; tRNA Tyr D FI9785_52 FI9785_52 K14236 tRNA-Tyr; tRNA Tyr D FI9785_22 FI9785_22 K14237 tRNA-Val; tRNA Val D FI9785_33 FI9785_33 K14237 tRNA-Val; tRNA Val D FI9785_417 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D FI9785_1506 gatA; glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D FI9785_1505 gatB; glutamyl-tRNA amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D FI9785_1507 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D FI9785_490 alaS; alaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D FI9785_875 aspS; aspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D FI9785_980 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D FI9785_891 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D FI9785_892 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D FI9785_1439 thrS; threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D FI9785_1556 serS; serS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D FI9785_418 cysS; cysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D FI9785_278 metS; metS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D FI9785_725 fmt; fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D FI9785_1249 valS; valS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D FI9785_522 leuS; leuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D FI9785_1225 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D FI9785_348 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D FI9785_528 argS; argS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D FI9785_773 proS; proS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D FI9785_874 hisS; hisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D FI9785_1419 pheS; Phe-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D FI9785_1418 pheT; pheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D FI9785_253 tyrS; tyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D FI9785_274 trpS; trpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ljf03060] D FI9785_377 secY; secY K03076 secY; preprotein translocase subunit SecY D FI9785_428 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D FI9785_1332 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG D FI9785_485 yajC; yajC K03210 yajC; preprotein translocase subunit YajC D FI9785_1423 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D FI9785_1808 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D FI9785_1357 secA; Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D FI9785_750 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D FI9785_1811 bacterial signal recognition particle RNA K01983 ffs; SRP RNA D FI9785_746 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D FI9785_755 sip1; sip1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D FI9785_908 sip1; sip1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D FI9785_995 lspA; lipoprotein signal peptidase, signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ljf04122] D FI9785_1220 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1254 NifS/IcsS protein-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1218 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D FI9785_1253 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:ljf03018] D FI9785_1333 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_851 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_1331 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D FI9785_333 ydbR; DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D FI9785_1009 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D FI9785_1363 HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D FI9785_1213 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D FI9785_1199 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D FI9785_1574 hypothetical protein predicted by Glimmer/Critica K12574 rnj; ribonuclease J [EC:3.1.-.-] D FI9785_1130 pfk; pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D FI9785_788 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D FI9785_479 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:ljf03030] D FI9785_1583 hypothetical protein predicted by Glimmer/Critica K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_1322 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_1131 dnaE; dnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D FI9785_774 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D FI9785_446 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D FI9785_452 holB; DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D FI9785_1202 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D FI9785_64 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D FI9785_75 dnaB; dnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D FI9785_894 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D FI9785_70 ssb; ssb K03111 ssb; single-strand DNA-binding protein D FI9785_p9785L.16 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D FI9785_157 rnh; putative ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D FI9785_1100 rnhB; rnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D FI9785_1446 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D FI9785_1509 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ljf03410] D FI9785_982 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D FI9785_1325 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D FI9785_148 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D FI9785_1445 mutM; mutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D FI9785_547 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D FI9785_757 hypothetical protein predicted by Glimmer/Critica K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D FI9785_102 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D FI9785_1446 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D FI9785_792 recJ; single-strand DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D FI9785_1509 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ljf03420] D FI9785_339 trcF; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D FI9785_1344 uvrA; excinuclease ABC, A subunit, UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D FI9785_1049 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D FI9785_1345 uvrB; excinuclease ABC, B subunit, UvrABC system K03702 uvrB; excinuclease ABC subunit B D FI9785_1141 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D FI9785_1611 hypothetical protein predicted by Glimmer/Critica K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D FI9785_1510 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D FI9785_1446 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D FI9785_1509 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ljf03430] D FI9785_481 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D FI9785_495 mutS2; MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D FI9785_1802 hypothetical protein predicted by Glimmer/Critica K07456 mutS2; DNA mismatch repair protein MutS2 D FI9785_482 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D FI9785_1611 hypothetical protein predicted by Glimmer/Critica K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D FI9785_1510 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D FI9785_714 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D FI9785_715 xseB; exodeoxyribonuclease VII (small subunit) K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D FI9785_792 recJ; single-strand DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D FI9785_70 ssb; ssb K03111 ssb; single-strand DNA-binding protein D FI9785_p9785L.16 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D FI9785_1131 dnaE; dnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D FI9785_774 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D FI9785_64 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D FI9785_446 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D FI9785_1202 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D FI9785_452 holB; DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D FI9785_1583 hypothetical protein predicted by Glimmer/Critica K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_1322 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_1509 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ljf03440] D FI9785_792 recJ; single-strand DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D FI9785_70 ssb; ssb K03111 ssb; single-strand DNA-binding protein D FI9785_p9785L.16 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D FI9785_66 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D FI9785_890 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D FI9785_448 recR; Recombination protein recR. K06187 recR; recombination protein RecR D FI9785_1364 recA; bacterial DNA recombination protein RecA K03553 recA; recombination protein RecA D FI9785_1446 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D FI9785_483 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D FI9785_484 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D FI9785_735 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D FI9785_1215 ATP-dependent RecD/TraA family DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D FI9785_1131 dnaE; dnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D FI9785_774 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D FI9785_64 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D FI9785_446 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D FI9785_1202 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D FI9785_452 holB; DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D FI9785_1583 hypothetical protein predicted by Glimmer/Critica K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_1322 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_724 priA; Primosomal protein N' (ATP-dependent helicase priA) (Replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ljf02010] D FI9785_1317 potD; Spermidine/putrescine ABC transporter solute-binding component K11069 potD; spermidine/putrescine transport system substrate-binding protein D FI9785_1318 potC; spermidine/putrescine ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein D FI9785_1319 potB; spermidine/putrescine ABC transporter permease component K11071 potB; spermidine/putrescine transport system permease protein D FI9785_1320 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D FI9785_674 ABC-type proline/glycine betaine transport system, permease and substrate binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D FI9785_673 proV; ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D FI9785_291 msmK; Multiple sugar-binding transport ATP-binding protein msmK. K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D FI9785_1577 ABC transporter ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D FI9785_292 malE; maltose ABC transporter substrate binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D FI9785_293 malF; putative maltose/maltodextrin ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D FI9785_294 malG; putative maltose/maltodextrin ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D FI9785_966 rbsD; high affinity ribose transport protein rbsD. K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D FI9785_638 pstS; phosphate ABC transporter phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D FI9785_639 pstC; Phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D FI9785_640 pstA; Phosphate transport system permease protein pstA. K02038 pstA; phosphate transport system permease protein D FI9785_641 pstB1; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D FI9785_642 pstB2; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D FI9785_1766 phosphate/phosphite/phosphonate ABC transporters, binding protein K02044 phnD; phosphonate transport system substrate-binding protein D FI9785_197 phnD; extracellular solute-binding protein PhnD K02044 phnD; phosphonate transport system substrate-binding protein D FI9785_198b phosphate/phosphonate ABC transporter permease component K02042 phnE; phosphonate transport system permease protein D FI9785_199 phnE2; phosphate/phosphonate ABC transporter permease component K02042 phnE; phosphonate transport system permease protein D FI9785_198 phnC; phosphate/phosphonate ABC transporter ATPase component PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D FI9785_619 amino acid ABC transporter solute-binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D FI9785_621 amino acid ABC transporter solute-binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D FI9785_623 unnamed protein product K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D FI9785_622 ABC-type amino acid transport system, permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D FI9785_620 amino acid ABC transporter ATPase component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D FI9785_635 ABC transporter permease component K17077 artQ; arginine/lysine/histidine transport system permease protein D FI9785_636 ABC transporter ATPase component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D FI9785_147 ABC transporter permease component K17073 lysX1; putative lysine transport system substrate-binding protein D FI9785_146 ABC transporter ATPase component K17076 lysY; putative lysine transport system ATP-binding protein D FI9785_858 metQ; ABC transporter substrate-binding protein, MetQ related K02073 metQ; D-methionine transport system substrate-binding protein D FI9785_860 ABC transporter permease component K02072 metI; D-methionine transport system permease protein D FI9785_859 metN; Methionine import ATP-binding protein MetN, ABC transporter ATPase component K02071 metN; D-methionine transport system ATP-binding protein D FI9785_1499 ABC-type transport system, permease component K16785 ecfT; energy-coupling factor transport system permease protein D FI9785_387 ABC-type cobalt transport system, permease component, CbiQ related K16785 ecfT; energy-coupling factor transport system permease protein D FI9785_129 ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein D FI9785_385 cbiO1; cobalt transporter ATP-binding subunit cbiO 1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D FI9785_386 cbiO2; Cobalt import ATP-binding protein cbiO 2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D FI9785_1493 hypothetical protein predicted by Glimmer/Critica K20491 nisE; lantibiotic transport system permease protein D FI9785_1494 ABC transporter ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein D FI9785_761 ABC transporter ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_762 ABC transporter ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_617 ABC transporter ATPase and permease components K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_618 ABC transporter ATPase and permease components K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_1664 ABC transporter ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_1663 ABC transporter ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_1764 cydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D FI9785_1763 cydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D FI9785_783 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D FI9785_1085 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ljf02060] D FI9785_1386 ptsI; phosphoenolpyruvate-protein phosphotransferase (enzyme I) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D FI9785_1387 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D FI9785_1707 scrA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBCA, sucrose specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D FI9785_581 scrA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBCA, lactose specific,sucrose-specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D FI9785_1605 bglP; phosphoenolpyruvate-dependent sugar phosphotransferase systeme EIIBCA, probably beta-glucosides specific K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D FI9785_571 lacF; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, lactose specific K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207] D FI9785_572 lacE; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBC, lactose specific K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207] D FI9785_267 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, lactose/cellobiose specific K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D FI9785_268 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, lactose/cellobiose specific K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D FI9785_1727 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_1769 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_666 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_269 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_262 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC K02761 celB; cellobiose PTS system EIIC component D FI9785_188 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, mannose specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D FI9785_1601 phosphoenolpyruvate-dependent sugar phosphotransferase system, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D FI9785_1723 manL; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probably mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D FI9785_1722 manM; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably mannose specific K02795 manY; mannose PTS system EIIC component D FI9785_1600 hosphoenolpyruvate-dependent sugar phosphotransferase system IIC component K02795 manY; mannose PTS system EIIC component D FI9785_186 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, mannose specific K02795 manY; mannose PTS system EIIC component D FI9785_1721 manN; phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probably mannose specific K02796 manZ; mannose PTS system EIID component D FI9785_1599 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID K02796 manZ; mannose PTS system EIID component D FI9785_187 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, mannose specific K02796 manZ; mannose PTS system EIID component D FI9785_1374 hypothetical protein predicted by Glimmer/Critica K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D FI9785_1756 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable galactitol specific K02775 gatC; galactitol PTS system EIIC component D FI9785_1755 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably galactitol specific K02775 gatC; galactitol PTS system EIIC component D FI9785_193 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, galactitol/fructose specific K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D FI9785_566 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, galactitol specific K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D FI9785_567 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, galactitol specific K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204] D FI9785_568 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, galactitol specific K20114 gatC; galactose PTS system EIIC component D FI9785_1653 fruA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probably fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D FI9785_213 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D FI9785_227 fructose-1-phosphate kinase-like protein K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D FI9785_1654 fruB; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:ljf03070] D FI9785_428 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D FI9785_1332 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG D FI9785_377 secY; secY K03076 secY; preprotein translocase subunit SecY D FI9785_485 yajC; yajC K03210 yajC; preprotein translocase subunit YajC D FI9785_1423 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D FI9785_1808 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D FI9785_1357 secA; Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D FI9785_746 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D FI9785_750 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:ljf02020] D FI9785_638 pstS; phosphate ABC transporter phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D FI9785_127 htrA; HtrA-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D FI9785_123 yycG; two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D FI9785_122 yycF; two-component system response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D FI9785_1900 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D FI9785_1734 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D FI9785_1733 dltB; DltB protein involved in the biosynthesis of D-alanyl-lipoteichoic acid K03739 dltB; membrane protein involved in D-alanine export D FI9785_1732 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D FI9785_1731 dltD; DltD protein involved in the biosynthesis of D-alanyl-lipoteichoic acid K03740 dltD; D-alanine transfer protein D FI9785_1424 two-component system sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D FI9785_1425 two-component system response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D FI9785_1494 ABC transporter ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein D FI9785_1493 hypothetical protein predicted by Glimmer/Critica K20491 nisE; lantibiotic transport system permease protein D FI9785_1405 glnA; glutamine-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_535 unnamed protein product K03092 rpoN; RNA polymerase sigma-54 factor D FI9785_536 unnamed protein product K03092 rpoN; RNA polymerase sigma-54 factor D FI9785_579 glsA; glsA K01425 glsA; glutaminase [EC:3.5.1.2] D FI9785_1761 cydA; cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D FI9785_1762 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D FI9785_1193 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D FI9785_667 wecB; wecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D FI9785_1797 speF; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ljf02024] D FI9785_1597 luxS; S-ribosylhomocysteinase, autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D FI9785_112 gadC; Glutamate/gamma-aminobutyrate antiporter. K20265 gadC; glutamate:GABA antiporter D FI9785_1602 oppA3; Oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_742 oppA; oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_743 oppA2; oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_691 unnamed protein product K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_692 unnamed protein product K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_740 oppB; oligopeptide ABC transporter permease component OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D FI9785_741 oppC; oligopeptide ABC transporter permease component OppC. K02034 ABC.PE.P1; peptide/nickel transport system permease protein D FI9785_738 oppD; Oligopeptide transport ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D FI9785_739 oppF; Oligopeptide transport ATP-binding protein oppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D FI9785_209 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D FI9785_1423 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D FI9785_1808 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D FI9785_428 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D FI9785_1332 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG D FI9785_377 secY; secY K03076 secY; preprotein translocase subunit SecY D FI9785_485 yajC; yajC K03210 yajC; preprotein translocase subunit YajC D FI9785_1357 secA; Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D FI9785_746 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D FI9785_750 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D FI9785_1494 ABC transporter ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein D FI9785_1493 hypothetical protein predicted by Glimmer/Critica K20491 nisE; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:ljf02040] D FI9785_895 rpoD; DNA-directed RNA polymerase sigma factor RpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor D FI9785_535 unnamed protein product K03092 rpoN; RNA polymerase sigma-54 factor D FI9785_536 unnamed protein product K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D FI9785_1333 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_851 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ljf01501] D FI9785_1792 copY; CopAB ATPase metal-fist type repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D FI9785_1697 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] D FI9785_1774 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] D FI9785_1567 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] D FI9785_985 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D FI9785_508 putative bifunctional glycosyltransferase/transpeptidase penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B D FI9785_1467 pbp2a; Penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:ljf01502] D FI9785_175 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D FI9785_335 alr; alr K01775 alr; alanine racemase [EC:5.1.1.1] D FI9785_332 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D FI9785_1235 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D FI9785_1233 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ljf01503] D FI9785_127 htrA; HtrA-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D FI9785_1734 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D FI9785_1733 dltB; DltB protein involved in the biosynthesis of D-alanyl-lipoteichoic acid K03739 dltB; membrane protein involved in D-alanine export D FI9785_1732 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D FI9785_1731 dltD; DltD protein involved in the biosynthesis of D-alanyl-lipoteichoic acid K03740 dltD; D-alanine transfer protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ljf01000] C 01001 Protein kinases [BR:ljf01001] D FI9785_728 prkC; deleted EC_number 2.7.1.37 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D FI9785_1181 epsC; tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D FI9785_123 yycG; two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D FI9785_1424 two-component system sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ljf01009] D FI9785_1130 pfk; pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D FI9785_727 prpC; protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:ljf01002] D FI9785_995 lspA; lipoprotein signal peptidase, signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D FI9785_413 pepC; pepC K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D FI9785_590 unnamed protein product K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D FI9785_589 unnamed protein product K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D FI9785_591 unnamed protein product K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D FI9785_592 unnamed protein product K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D FI9785_256 pepG; Cysteine aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D FI9785_254 pepG; Cysteine aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D FI9785_694 pepE; aminopeptidase E K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D FI9785_1747 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D FI9785_304 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D FI9785_1717 hypothetical protein predicted by Glimmer/Critica K07010 K07010; putative glutamine amidotransferase D FI9785_1703 hypothetical protein predicted by Glimmer/Critica K07010 K07010; putative glutamine amidotransferase D FI9785_1628 hypothetical protein predicted by Glimmer/Critica K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D FI9785_684 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D FI9785_202 asnB; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D FI9785_401 conserved hypothetical protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D FI9785_1052 unnamed protein product K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D FI9785_854 unnamed protein product K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D FI9785_791 srtA; sortase K07284 srtA; sortase A [EC:3.4.22.70] D FI9785_1578 pepD; pepD K08659 pepDA; dipeptidase [EC:3.4.-.-] D FI9785_325 pepA; pepA K08659 pepDA; dipeptidase [EC:3.4.-.-] D FI9785_747 pepDB; pepDB K08659 pepDA; dipeptidase [EC:3.4.-.-] D FI9785_1680 pepD; pepD K08659 pepDA; dipeptidase [EC:3.4.-.-] D FI9785_613 unnamed protein product K08659 pepDA; dipeptidase [EC:3.4.-.-] D FI9785_1437 unnamed protein product K07052 K07052; CAAX protease family protein D FI9785_1758 hypothetical protein predicted by Glimmer/Critica K07052 K07052; CAAX protease family protein D FI9785_682 pepN; pepN K01256 pepN; aminopeptidase N [EC:3.4.11.2] D FI9785_1644 pepF; pepF K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D FI9785_214 pepO2; endopeptidase O2 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D FI9785_929 pepO; endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-] D FI9785_509 pepV; Beta-Ala-Xaa dipeptidase K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-] D FI9785_1587 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D FI9785_902 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D FI9785_1062 hipO; N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D FI9785_670 pepM; pepM K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D FI9785_709 pepP; Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D FI9785_344 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D FI9785_1164 htpX; protease HtpX-like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D FI9785_133 htpX; heat shock metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D FI9785_772 rseP; membrane-associated zinc metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D FI9785_127 htrA; HtrA-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D FI9785_527 dacA; dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D FI9785_1339 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D FI9785_681 pepX; Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11] D FI9785_1205 hypothetical protein predicted by Glimmer/Critica K07177 K07177; Lon-like protease D FI9785_758 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D FI9785_755 sip1; sip1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D FI9785_908 sip1; sip1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D FI9785_117 pepI; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D FI9785_1102 ctpA; carboxy-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D FI9785_1410 conserved hypothetical protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D FI9785_1095 hslV; ATP-dependent protease peptidase subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] C 01003 Glycosyltransferases [BR:ljf01003] D FI9785_1553 unnamed protein product K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D FI9785_1552 putative glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] D FI9785_985 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D FI9785_508 putative bifunctional glycosyltransferase/transpeptidase penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B D FI9785_1467 pbp2a; Penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D FI9785_1523 tarA; teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D FI9785_1362 tagO; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ljf01005] D FI9785_1362 tagO; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D FI9785_242 putative glycosyl transferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ljf01011] D FI9785_300 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D FI9785_1321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D FI9785_1451 murC; murC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D FI9785_1234 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D FI9785_1660 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D FI9785_175 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D FI9785_335 alr; alr K01775 alr; alanine racemase [EC:5.1.1.1] D FI9785_498 murI; murI K01776 murI; glutamate racemase [EC:5.1.1.3] D FI9785_1235 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D FI9785_1233 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D FI9785_521 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D FI9785_985 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D FI9785_508 putative bifunctional glycosyltransferase/transpeptidase penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B D FI9785_1467 pbp2a; Penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D FI9785_1236 pbp_2B; Penicillin-binding protein 2B K08724 pbpB; penicillin-binding protein 2B D FI9785_1414 pbp; Penicillin-binding protein K21465 pbpA; penicillin-binding protein A D FI9785_527 dacA; dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D FI9785_1628 hypothetical protein predicted by Glimmer/Critica K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D FI9785_791 srtA; sortase K07284 srtA; sortase A [EC:3.4.22.70] D FI9785_1417 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:ljf01004] D FI9785_1367 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D FI9785_1609 hypothetical protein predicted by Glimmer/Critica K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D FI9785_736 plsX; Fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D FI9785_1015 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D FI9785_251 hypothetical protein predicted by Glimmer/Critica K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D FI9785_764 conserved hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ljf01008] D FI9785_1659 racD; racD K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:ljf01006] D FI9785_716 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D FI9785_770 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D FI9785_1406 miaA; miaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D FI9785_1108 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D FI9785_1765 conserved hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:ljf01007] D FI9785_417 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D FI9785_253 tyrS; tyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D FI9785_274 trpS; trpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D FI9785_418 cysS; cysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D FI9785_528 argS; argS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D FI9785_278 metS; metS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D FI9785_1225 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D FI9785_1249 valS; valS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D FI9785_522 leuS; leuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D FI9785_348 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D FI9785_875 aspS; aspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D FI9785_980 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D FI9785_874 hisS; hisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D FI9785_891 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D FI9785_892 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D FI9785_1556 serS; serS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D FI9785_773 proS; proS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D FI9785_1439 thrS; threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D FI9785_490 alaS; alaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D FI9785_1419 pheS; Phe-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D FI9785_1418 pheT; pheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D FI9785_876 aspC; aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D FI9785_1059 araT; aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D FI9785_1293 patB; aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ljf00194] D FI9785_1267 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D FI9785_1268 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D FI9785_1269 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D FI9785_1270 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D FI9785_1271 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D FI9785_1272 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D FI9785_1273 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D FI9785_1274 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ljf03000] D FI9785_113 unnamed protein product K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D FI9785_562 lacR; Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D FI9785_1655 fruR; transcriptional regulator, putative fructose operon repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D FI9785_653 unnamed protein product K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D FI9785_507 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D FI9785_1350 galR; HTH-type transcriptional repressor GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D FI9785_1709 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D FI9785_580 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D FI9785_263 putative transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D FI9785_266 putative transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D FI9785_1525 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D FI9785_1450 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D FI9785_182 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D FI9785_1000 hypothetical protein predicted by Glimmer/Critica K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D FI9785_1474 CRP/FNR family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D FI9785_403 conserved hypothetical protein K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D FI9785_1615 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D FI9785_1792 copY; CopAB ATPase metal-fist type repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D FI9785_283 purR; purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D FI9785_532 unnamed protein product K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D FI9785_472 rex; redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor D FI9785_1606 bglG; transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D FI9785_1668 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D FI9785_1670 parB2; chromosome-partitioning protein ParB2 K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D FI9785_570 antiterminator protein K02531 lacT; transcriptional antiterminator D FI9785_786 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D FI9785_1337 cggR; Central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator D FI9785_919 pyrR2; pyrimidine operon regulator protein PyrR2 K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D FI9785_924 pyrR1; pyrimidine operon regulator protein PyrR1 K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D FI9785_1443 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D FI9785_1239 mraZ; Protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ljf03021] D FI9785_383 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D FI9785_350 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D FI9785_351 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D FI9785_298 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta D FI9785_723 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D FI9785_895 rpoD; DNA-directed RNA polymerase sigma factor RpoD (Sigma-70) K03086 rpoD; RNA polymerase primary sigma factor D FI9785_421 sig; DNA-directed RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor D FI9785_535 unnamed protein product K03092 rpoN; RNA polymerase sigma-54 factor D FI9785_536 unnamed protein product K03092 rpoN; RNA polymerase sigma-54 factor D FI9785_776 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D FI9785_712 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D FI9785_429 nusG; Transcription antitermination protein nusG. K02601 nusG; transcription termination/antitermination protein NusG D FI9785_1416 greA; Transcription elongation factor greA K03624 greA; transcription elongation factor GreA D FI9785_258 greA; Transcription elongation factor greA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:ljf03019] D FI9785_744 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D FI9785_1213 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D FI9785_1199 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D FI9785_1574 hypothetical protein predicted by Glimmer/Critica K12574 rnj; ribonuclease J [EC:3.1.-.-] D FI9785_1363 HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D FI9785_1331 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D FI9785_1463 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D FI9785_333 ydbR; DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D FI9785_489 rhe3; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D FI9785_1009 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D FI9785_1333 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_851 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_1130 pfk; pfk K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D FI9785_788 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D FI9785_479 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D FI9785_1342 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:ljf03011] D FI9785_1119 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D FI9785_766 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D FI9785_363 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D FI9785_1256 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D FI9785_374 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D FI9785_69 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D FI9785_354 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D FI9785_371 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D FI9785_390 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D FI9785_356 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D FI9785_382 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D FI9785_353 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D FI9785_381 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D FI9785_370 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D FI9785_240 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D FI9785_1200 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D FI9785_751 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D FI9785_366 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D FI9785_71 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D FI9785_361 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D FI9785_1201 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D FI9785_885 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D FI9785_431 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D FI9785_360 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D FI9785_357 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D FI9785_358 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D FI9785_369 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D FI9785_372 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D FI9785_74 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D FI9785_436 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D FI9785_430 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D FI9785_437 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D FI9785_389 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D FI9785_367 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D FI9785_376 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D FI9785_364 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D FI9785_384 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D FI9785_373 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D FI9785_754 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D FI9785_1434 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D FI9785_707 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D FI9785_362 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D FI9785_359 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D FI9785_368 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D FI9785_708 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D FI9785_732 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D FI9785_365 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D FI9785_375 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D FI9785_331 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D FI9785_1135 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D FI9785_1413 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D FI9785_427 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D FI9785_1810 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D FI9785_1435 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D FI9785_380 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D FI9785_18 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_26 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_48 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_30 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_1813 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1815 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1816 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1814 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_45 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_19 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_1 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_27 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ljf03009] D FI9785_744 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D FI9785_889 era; GTP-binding protein K03595 era; GTPase D FI9785_1140 ctgA; GTP-binding protein CgtA K03979 obgE; GTPase [EC:3.6.5.-] D FI9785_776 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D FI9785_712 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D FI9785_429 nusG; Transcription antitermination protein nusG. K02601 nusG; transcription termination/antitermination protein NusG D FI9785_1252 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D FI9785_281 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D FI9785_726 rsmB; rRNA methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D FI9785_440 conserved hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D FI9785_1207 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D FI9785_1671 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D FI9785_1238 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D FI9785_454 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D FI9785_717 conserved hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D FI9785_420 trmH; tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D FI9785_128 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D FI9785_1492 rumA2; 23S rRNA (uracil-5-)-methyltransferase RumA2 K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D FI9785_1123 conserved hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D FI9785_1378 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D FI9785_1468 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D FI9785_996 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D FI9785_458 conserved hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D FI9785_955 hypothetical protein predicted by Glimmer/Critica K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D FI9785_752 rimM; 16S rRNA-processing protein rimM K02860 rimM; 16S rRNA processing protein RimM D FI9785_870 prmA; methyltransferase, ribosomal protein L11 K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D FI9785_492 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D FI9785_419 hypothetical protein predicted by Glimmer/Critica K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D FI9785_333 ydbR; DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D FI9785_489 rhe3; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D FI9785_729 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D FI9785_1118 engA; GTP-binding protein engA. K03977 engA; GTPase D FI9785_1101 conserved hypothetical protein K14540 rbgA; ribosome biogenesis GTPase A D FI9785_1626 conserved hypothetical protein K03665 hflX; GTPase D FI9785_1431 hypothetical protein predicted by Glimmer/Critica K06948 yqeH; 30S ribosome assembly GTPase D FI9785_1276 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D FI9785_872 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D FI9785_780 rbfA; rbfA K02834 rbfA; ribosome-binding factor A D FI9785_775 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP D FI9785_1428 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D FI9785_888 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D FI9785_1358 yfiA; ribosomal protein S30Ae K05808 hpf; ribosome hibernation promoting factor D FI9785_1666 ychF; conserved hypothetical protein K06942 ychF; ribosome-binding ATPase D FI9785_1426 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ljf03016] D FI9785_1138 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D FI9785_1106 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D FI9785_773 proS; proS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D FI9785_1225 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D FI9785_522 leuS; leuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D FI9785_278 metS; metS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D FI9785_528 argS; argS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D FI9785_348 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D FI9785_875 aspS; aspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D FI9785_490 alaS; alaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D FI9785_980 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D FI9785_1439 thrS; threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D FI9785_1556 serS; serS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D FI9785_418 cysS; cysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D FI9785_1249 valS; valS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D FI9785_874 hisS; hisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D FI9785_1419 pheS; Phe-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D FI9785_1418 pheT; pheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D FI9785_253 tyrS; tyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D FI9785_274 trpS; trpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D FI9785_873 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D FI9785_1459 hit; hit protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D FI9785_1456 tRNA (guanine-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D FI9785_388 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D FI9785_781 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D FI9785_1220 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1254 NifS/IcsS protein-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1276 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D FI9785_1406 miaA; miaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D FI9785_1807 thdF; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D FI9785_1806 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D FI9785_1809 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D FI9785_1812 Bacterial RNase P class B K01978 rnpB; M1 RNA D FI9785_891 glyQ; glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D FI9785_892 glyS; glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D FI9785_417 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D FI9785_869 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D FI9785_445 conserved hypothetical proteins K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D FI9785_347 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D FI9785_1097 trmFO; tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D FI9785_753 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D FI9785_900 hypothetical protein predicted by Glimmer/Critica K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D FI9785_1372 cspR; rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D FI9785_1421 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D FI9785_1218 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D FI9785_1253 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D FI9785_343 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D FI9785_457 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D FI9785_459 putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D FI9785_1323 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D FI9785_1427 conserved hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D FI9785_1331 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C 03012 Translation factors [BR:ljf03012] D FI9785_779 infB; translation initiation factor IF-2. K02519 infB; translation initiation factor IF-2 D FI9785_1436 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D FI9785_471 ABC transporter ATPase component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D FI9785_767 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D FI9785_1197 tuf; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D FI9785_355 fusA; elongation factor EF-G K02355 fusA; elongation factor G D FI9785_1278 prfA; Peptide chain release factor 1 (RF-1) K02835 prfA; peptide chain release factor 1 D FI9785_769 frr; frr K02838 frr; ribosome recycling factor D FI9785_1277 hemK; methyltransferase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D FI9785_338 pth; aminoacyl-tRNA aminoacylhydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D FI9785_379 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D FI9785_1607 efp; Elongation factor P (EF-P). K02356 efp; elongation factor P D FI9785_710 efp; Elongation factor P (EF-P). K02356 efp; elongation factor P D FI9785_1356 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D FI9785_1391 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ljf03110] D FI9785_349 clpC; ATP-dependent Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D FI9785_1389 clpE; ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D FI9785_1725 clpE2; ATP-dependent Clp protease ATP-binding subunit ClpE2 K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D FI9785_1195 clpX; ATP-dependent Clp protease ATP-binding subunit clpX. K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D FI9785_1094 hslU; ATP-dependent hsl protease ATP-binding subunit hslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D FI9785_788 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D FI9785_479 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D FI9785_789 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D FI9785_346 hslO; Hsp33 chaperonin K04083 hslO; molecular chaperone Hsp33 D FI9785_787 grpE; nucleotide exchange factor, co-chaperone for DnaK K03687 GRPE; molecular chaperone GrpE D FI9785_259 hsp1; heat shock protein from the Hsp20 family K13993 HSP20; HSP20 family protein D FI9785_478 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D FI9785_127 htrA; HtrA-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D FI9785_344 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D FI9785_1274 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D FI9785_1008 ppiB; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D FI9785_1462 prsA; peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D FI9785_496 trx; Thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:ljf04131] D FI9785_1336 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D FI9785_963 pgam; phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_407 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_233 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_1129 pyk; pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:ljf03032] D FI9785_157 rnh; putative ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D FI9785_1117 hupB; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D FI9785_1900 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D FI9785_75 dnaB; dnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D FI9785_894 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D FI9785_1441 dnaB; chromosome replication initiation / membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein D FI9785_1440 dnaI; Primosomal protein DnaI K11144 dnaI; primosomal protein DnaI D FI9785_70 ssb; ssb K03111 ssb; single-strand DNA-binding protein D FI9785_p9785L.16 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D FI9785_1131 dnaE; dnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D FI9785_774 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D FI9785_64 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D FI9785_1202 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D FI9785_452 holB; DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D FI9785_1583 hypothetical protein predicted by Glimmer/Critica K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_1322 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_446 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D FI9785_1100 rnhB; rnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D FI9785_1446 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D FI9785_1509 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D FI9785_68 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D FI9785_67 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D FI9785_1013 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D FI9785_1014 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D FI9785_1098 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ljf03036] D FI9785_744 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D FI9785_1117 hupB; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D FI9785_1900 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein D FI9785_646 unnamed protein product K04047 dps; starvation-inducible DNA-binding protein D FI9785_745 smc; chromosome partitioning protein Smc K03529 smc; chromosome segregation protein D FI9785_1125 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A D FI9785_1124 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B D FI9785_1231 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA D FI9785_341 hypothetical protein predicted by Glimmer/Critica K13052 divIC; cell division protein DivIC D FI9785_1370 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D FI9785_1237 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D FI9785_1232 ftsQ; cell division proteins FtsQ K03589 ftsQ; cell division protein FtsQ D FI9785_1209 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW D FI9785_1230 ftsZ; Cell division protein FtsZ. K03531 ftsZ; cell division protein FtsZ D FI9785_1255 ezrA; Septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator D FI9785_1226 divIVA; divIVA K04074 divIVA; cell division initiation protein D FI9785_1229 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF D FI9785_1244 mreB; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D FI9785_1265 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D FI9785_1243 mreC; Rod shape-determining protein mreC. K03570 mreC; rod shape-determining protein MreC D FI9785_1242 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D FI9785_1261 rodA; rod-shape determining protein K05837 rodA; rod shape determining protein RodA D FI9785_1669 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D FI9785_1668 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D FI9785_1670 parB2; chromosome-partitioning protein ParB2 K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D FI9785_1013 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D FI9785_1014 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D FI9785_1806 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D FI9785_1671 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D FI9785_1097 trmFO; tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D FI9785_1096 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D FI9785_1127 xerD; tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD D FI9785_686 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D FI9785_1194 engB; Probable GTP-binding protein EngB K03978 engB; GTP-binding protein D FI9785_1340 conserved hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:ljf03400] D FI9785_1325 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D FI9785_148 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D FI9785_982 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D FI9785_1154 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D FI9785_1489 hypothetical protein predicted by Glimmer/Critica K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D FI9785_415 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D FI9785_151 adaB; methylated-DNA--protein-cysteine S-methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D FI9785_757 hypothetical protein predicted by Glimmer/Critica K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D FI9785_547 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D FI9785_1445 mutM; mutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D FI9785_102 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D FI9785_792 recJ; single-strand DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D FI9785_1509 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D FI9785_1446 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D FI9785_1344 uvrA; excinuclease ABC, A subunit, UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D FI9785_1049 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D FI9785_1345 uvrB; excinuclease ABC, B subunit, UvrABC system K03702 uvrB; excinuclease ABC subunit B D FI9785_1141 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D FI9785_1611 hypothetical protein predicted by Glimmer/Critica K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D FI9785_1510 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D FI9785_350 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D FI9785_351 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D FI9785_383 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D FI9785_298 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta D FI9785_723 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D FI9785_339 trcF; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D FI9785_481 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D FI9785_495 mutS2; MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2 D FI9785_1802 hypothetical protein predicted by Glimmer/Critica K07456 mutS2; DNA mismatch repair protein MutS2 D FI9785_482 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D FI9785_714 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D FI9785_715 xseB; exodeoxyribonuclease VII (small subunit) K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D FI9785_1131 dnaE; dnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D FI9785_774 polC; DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D FI9785_64 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D FI9785_1202 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D FI9785_452 holB; DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D FI9785_1583 hypothetical protein predicted by Glimmer/Critica K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_1322 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D FI9785_446 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D FI9785_70 ssb; ssb K03111 ssb; single-strand DNA-binding protein D FI9785_p9785L.16 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D FI9785_1215 ATP-dependent RecD/TraA family DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D FI9785_1364 recA; bacterial DNA recombination protein RecA K03553 recA; recombination protein RecA D FI9785_483 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA D FI9785_484 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D FI9785_724 priA; Primosomal protein N' (ATP-dependent helicase priA) (Replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D FI9785_416 radA; DNA repair protein radA K04485 radA; DNA repair protein RadA/Sms D FI9785_66 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D FI9785_735 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D FI9785_890 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D FI9785_448 recR; Recombination protein recR. K06187 recR; recombination protein RecR D FI9785_718 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N) D FI9785_986 recU; Holliday junction-specific endonuclease RecU K03700 recU; recombination protein U D FI9785_977 rexA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D FI9785_976 rexB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D FI9785_68 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D FI9785_67 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D FI9785_1098 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D FI9785_1117 hupB; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D FI9785_1009 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D FI9785_487 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D FI9785_758 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D FI9785_1396 recX; Regulatory protein RecX K03565 recX; regulatory protein D FI9785_978 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D FI9785_1543 hypothetical protein predicted by Glimmer/Critica K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D FI9785_1634 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D FI9785_488 hypothetical protein predicted by Glimmer/Critica K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:ljf03029] D FI9785_779 infB; translation initiation factor IF-2. K02519 infB; translation initiation factor IF-2 D FI9785_1436 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D FI9785_767 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts D FI9785_1197 tuf; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D FI9785_355 fusA; elongation factor EF-G K02355 fusA; elongation factor G D FI9785_889 era; GTP-binding protein K03595 era; GTPase D FI9785_253 tyrS; tyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D FI9785_522 leuS; leuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D FI9785_875 aspS; aspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D FI9785_528 argS; argS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D FI9785_1506 gatA; glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D FI9785_1505 gatB; glutamyl-tRNA amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D FI9785_1507 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D FI9785_70 ssb; ssb K03111 ssb; single-strand DNA-binding protein D FI9785_p9785L.16 putative single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D FI9785_788 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D FI9785_787 grpE; nucleotide exchange factor, co-chaperone for DnaK K03687 GRPE; molecular chaperone GrpE D FI9785_479 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D FI9785_478 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D FI9785_789 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D FI9785_1220 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1254 NifS/IcsS protein-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1423 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D FI9785_1808 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ljf02000] D FI9785_761 ABC transporter ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_762 ABC transporter ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_617 ABC transporter ATPase and permease components K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_618 ABC transporter ATPase and permease components K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_1664 ABC transporter ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_1663 ABC transporter ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D FI9785_480 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D FI9785_1764 cydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D FI9785_1763 cydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D FI9785_783 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D FI9785_1085 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D FI9785_1317 potD; Spermidine/putrescine ABC transporter solute-binding component K11069 potD; spermidine/putrescine transport system substrate-binding protein D FI9785_1318 potC; spermidine/putrescine ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein D FI9785_1319 potB; spermidine/putrescine ABC transporter permease component K11071 potB; spermidine/putrescine transport system permease protein D FI9785_1320 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D FI9785_674 ABC-type proline/glycine betaine transport system, permease and substrate binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D FI9785_673 proV; ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D FI9785_291 msmK; Multiple sugar-binding transport ATP-binding protein msmK. K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D FI9785_1577 ABC transporter ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D FI9785_292 malE; maltose ABC transporter substrate binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D FI9785_293 malF; putative maltose/maltodextrin ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D FI9785_294 malG; putative maltose/maltodextrin ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D FI9785_606 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein D FI9785_605 ABC transporter ATPase component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D FI9785_470 conserved hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D FI9785_1573 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D FI9785_1576 ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D FI9785_1575 ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D FI9785_638 pstS; phosphate ABC transporter phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D FI9785_639 pstC; Phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein D FI9785_640 pstA; Phosphate transport system permease protein pstA. K02038 pstA; phosphate transport system permease protein D FI9785_641 pstB1; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D FI9785_642 pstB2; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D FI9785_1766 phosphate/phosphite/phosphonate ABC transporters, binding protein K02044 phnD; phosphonate transport system substrate-binding protein D FI9785_197 phnD; extracellular solute-binding protein PhnD K02044 phnD; phosphonate transport system substrate-binding protein D FI9785_198b phosphate/phosphonate ABC transporter permease component K02042 phnE; phosphonate transport system permease protein D FI9785_199 phnE2; phosphate/phosphonate ABC transporter permease component K02042 phnE; phosphonate transport system permease protein D FI9785_198 phnC; phosphate/phosphonate ABC transporter ATPase component PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D FI9785_619 amino acid ABC transporter solute-binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D FI9785_621 amino acid ABC transporter solute-binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D FI9785_623 unnamed protein product K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D FI9785_622 ABC-type amino acid transport system, permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D FI9785_620 amino acid ABC transporter ATPase component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D FI9785_635 ABC transporter permease component K17077 artQ; arginine/lysine/histidine transport system permease protein D FI9785_636 ABC transporter ATPase component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D FI9785_858 metQ; ABC transporter substrate-binding protein, MetQ related K02073 metQ; D-methionine transport system substrate-binding protein D FI9785_860 ABC transporter permease component K02072 metI; D-methionine transport system permease protein D FI9785_859 metN; Methionine import ATP-binding protein MetN, ABC transporter ATPase component K02071 metN; D-methionine transport system ATP-binding protein D FI9785_327 conserved hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D FI9785_328 ABC transporter permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein D FI9785_329 ABC transporter ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D FI9785_147 ABC transporter permease component K17073 lysX1; putative lysine transport system substrate-binding protein D FI9785_146 ABC transporter ATPase component K17076 lysY; putative lysine transport system ATP-binding protein D FI9785_435 ABC transporter solute-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D FI9785_899 ABC transporter solute-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D FI9785_433 unnamed protein product K02029 ABC.PA.P; polar amino acid transport system permease protein D FI9785_896 ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D FI9785_897 ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D FI9785_898 ABC transporter ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D FI9785_434 ABC transporter ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D FI9785_1602 oppA3; Oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_742 oppA; oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_743 oppA2; oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_691 unnamed protein product K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_692 unnamed protein product K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D FI9785_740 oppB; oligopeptide ABC transporter permease component OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D FI9785_741 oppC; oligopeptide ABC transporter permease component OppC. K02034 ABC.PE.P1; peptide/nickel transport system permease protein D FI9785_738 oppD; Oligopeptide transport ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D FI9785_739 oppF; Oligopeptide transport ATP-binding protein oppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D FI9785_1497 conserved hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component D FI9785_1499 ABC-type transport system, permease component K16785 ecfT; energy-coupling factor transport system permease protein D FI9785_387 ABC-type cobalt transport system, permease component, CbiQ related K16785 ecfT; energy-coupling factor transport system permease protein D FI9785_129 ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein D FI9785_385 cbiO1; cobalt transporter ATP-binding subunit cbiO 1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D FI9785_386 cbiO2; Cobalt import ATP-binding protein cbiO 2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D FI9785_1498 ABC-type cobalt transport system, ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D FI9785_130 ABC transporter ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D FI9785_131 conserved hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D FI9785_1307 ABC transporter solute-binding component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D FI9785_1648 ABC transporter solute-binding component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D FI9785_1646 ABC transporter permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D FI9785_1647 ABC transporter ATPase component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D FI9785_1493 hypothetical protein predicted by Glimmer/Critica K20491 nisE; lantibiotic transport system permease protein D FI9785_1494 ABC transporter ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein D FI9785_1457 ABC transporter, permease protein K25157 ecsB; ABC-2 type transport system permease protein D FI9785_1458 ABC transporter ATPase component K25158 ecsA; ABC-2 type transport system ATP-binding protein D FI9785_1657 ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D FI9785_904 ABC transporter ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D FI9785_1658 ABC transporter ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D FI9785_1686 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D FI9785_1623 hypothetical protein predicted by Glimmer/Critica K02004 ABC.CD.P; putative ABC transport system permease protein D FI9785_1760 ABC transporter ATPase and permease components K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D FI9785_1624 ABC transporter ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D FI9785_1685 ABC transporter ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D FI9785_171 Multidrug resistance protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump D FI9785_170 Multidrug resistance protein (Na(+)/drug antiporter) K26937 dinF; MATE family, multidrug efflux pump D FI9785_1702 major facilitator superfamily permease K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D FI9785_600 major facilitator superfamily permease K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D FI9785_969 major facilitator superfamily permease K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D FI9785_1800 major facilitator superfamily permease K08368 yaaU; MFS transporter, putative metabolite transport protein D FI9785_1386 ptsI; phosphoenolpyruvate-protein phosphotransferase (enzyme I) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D FI9785_1387 ptsH; Phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D FI9785_1707 scrA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBCA, sucrose specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D FI9785_581 scrA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBCA, lactose specific,sucrose-specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D FI9785_1605 bglP; phosphoenolpyruvate-dependent sugar phosphotransferase systeme EIIBCA, probably beta-glucosides specific K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D FI9785_1653 fruA; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probably fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D FI9785_213 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D FI9785_571 lacF; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, lactose specific K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207] D FI9785_572 lacE; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBC, lactose specific K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207] D FI9785_267 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, lactose/cellobiose specific K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D FI9785_268 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, lactose/cellobiose specific K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D FI9785_1727 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_1769 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_666 celB; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_269 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, cellobiose specific K02761 celB; cellobiose PTS system EIIC component D FI9785_262 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC K02761 celB; cellobiose PTS system EIIC component D FI9785_1374 hypothetical protein predicted by Glimmer/Critica K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D FI9785_1756 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable galactitol specific K02775 gatC; galactitol PTS system EIIC component D FI9785_1755 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably galactitol specific K02775 gatC; galactitol PTS system EIIC component D FI9785_193 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, galactitol/fructose specific K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D FI9785_566 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, galactitol specific K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D FI9785_567 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, galactitol specific K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204] D FI9785_568 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, galactitol specific K20114 gatC; galactose PTS system EIIC component D FI9785_1601 phosphoenolpyruvate-dependent sugar phosphotransferase system, IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D FI9785_1723 manL; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probably mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D FI9785_188 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, mannose specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D FI9785_1722 manM; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably mannose specific K02795 manY; mannose PTS system EIIC component D FI9785_1600 hosphoenolpyruvate-dependent sugar phosphotransferase system IIC component K02795 manY; mannose PTS system EIIC component D FI9785_186 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, mannose specific K02795 manY; mannose PTS system EIIC component D FI9785_1721 manN; phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probably mannose specific K02796 manZ; mannose PTS system EIID component D FI9785_1599 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID K02796 manZ; mannose PTS system EIID component D FI9785_187 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, mannose specific K02796 manZ; mannose PTS system EIID component D FI9785_584 unnamed protein product K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D FI9785_551 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D FI9785_438 conserved hypothetical protein K10716 kch; voltage-gated potassium channel D FI9785_1592 mscL; Large-conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel D FI9785_503 hypothetical protein predicted by Glimmer/Critica K22044 ybiO; moderate conductance mechanosensitive channel D FI9785_72 conserved hypothetical protein K03284 corA; magnesium transporter D FI9785_1311 crcB; putative integral membrane protein CrcB,possibly involved in chromosome condensation K06199 crcB; fluoride exporter D FI9785_1312 crcB2; putative CrcB-like integral membrane protein,possibly involved in chromosome condensation K06199 crcB; fluoride exporter D FI9785_1080 unnamed protein product K24915 TMEM175; TMEM175 potassium channel family protein D FI9785_1392 hypothetical protein predicted by Glimmer/Critica K03699 tlyC; magnesium and cobalt exporter, CNNM family D FI9785_661 hypothetical protein predicted by Glimmer/Critica K03699 tlyC; magnesium and cobalt exporter, CNNM family D FI9785_798 major facilitator superfamily permease K16211 malY; maltose/moltooligosaccharide transporter D FI9785_112 gadC; Glutamate/gamma-aminobutyrate antiporter. K20265 gadC; glutamate:GABA antiporter D FI9785_404 cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D FI9785_248 putative sugar uptake protein K05340 glcU; glucose uptake protein D FI9785_967 rbsU; Putative ribose uptake protein rbsU. K06216 rbsU; putative ribose uptake protein D FI9785_1645 lctP; lctP K03303 lutP; lactate permease D FI9785_1495 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D FI9785_177 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D FI9785_1741 nah; Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D FI9785_561 putative uracil permease K02824 uraA; uracil permease D FI9785_301 pbuX; xanthine/uracil permease K16169 pbuX; xanthine permease D FI9785_1782 conserved hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D FI9785_1785 unnamed protein product K06901 pbuG; adenine/guanine/hypoxanthine permease D FI9785_1787 conserved hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D FI9785_1803 eriC; putative chloride channel protein K03281 clcA; chloride channel protein, CIC family D FI9785_98 putative chloride channel protein K03281 clcA; chloride channel protein, CIC family D FI9785_545 hypothetical protein predicted by Glimmer/Critica K03281 clcA; chloride channel protein, CIC family D FI9785_217 kup; Probable potassium transport system protein K03549 kup; KUP system potassium uptake protein D FI9785_218 kup; Probable potassium transport system protein kup. K03549 kup; KUP system potassium uptake protein D FI9785_1121 hypothetical protein predicted by Glimmer/Critica K23675 fmnP; riboflavin transporter D FI9785_1209 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW D FI9785_1181 epsC; tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D FI9785_1182 epsB; polymerization and chain length determination protein K19420 epsA; protein tyrosine kinase modulator D FI9785_1589 pnuC; Nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D FI9785_533 unnamed protein product K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:ljf02044] D FI9785_1228 putative membrane protein K02221 yggT; YggT family protein D FI9785_1204 comEA; competence protein ComEA K02237 comEA; competence protein ComEA D FI9785_275 conserved hypothetical protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D FI9785_1203 comEC; competence protein ComEC K02238 comEC; competence protein ComEC D FI9785_1360 comFA; competence protein ComFA K02240 comFA; competence protein ComFA D FI9785_1359 comFC; competence protein ComFC K02242 comFC; competence protein ComFC D FI9785_1303 comGA; competence protein ComGA K02243 comGA; competence protein ComGA D FI9785_1302 comGB; competence protein ComGB K02244 comGB; competence protein ComGB D FI9785_1301 comGC; comGC K02245 comGC; competence protein ComGC D FI9785_1299 hypothetical protein predicted by Glimmer/Critica K02248 comGF; competence protein ComGF D FI9785_352 type 4 prepilin-like protein specific leader peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D FI9785_1357 secA; Preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D FI9785_428 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D FI9785_1332 secG; preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG D FI9785_377 secY; secY K03076 secY; preprotein translocase subunit SecY D FI9785_750 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D FI9785_746 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D FI9785_485 yajC; yajC K03210 yajC; preprotein translocase subunit YajC D FI9785_1423 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D FI9785_1808 conserved membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:ljf02042] D FI9785_1392 hypothetical protein predicted by Glimmer/Critica K03699 tlyC; magnesium and cobalt exporter, CNNM family D FI9785_661 hypothetical protein predicted by Glimmer/Critica K03699 tlyC; magnesium and cobalt exporter, CNNM family D FI9785_1105 hemolysin III-like protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ljf02022] D FI9785_123 yycG; two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D FI9785_122 yycF; two-component system response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D FI9785_1424 two-component system sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D FI9785_1425 two-component system response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D FI9785_1290 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ljf04812] D FI9785_1244 mreB; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D FI9785_1265 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D FI9785_1230 ftsZ; Cell division protein FtsZ. K03531 ftsZ; cell division protein FtsZ D FI9785_1231 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA D FI9785_1669 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D FI9785_1668 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D FI9785_1670 parB2; chromosome-partitioning protein ParB2 K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ljf04147] D FI9785_1333 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_851 eno; eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D FI9785_1336 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D FI9785_1335 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D FI9785_1129 pyk; pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D FI9785_479 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D FI9785_788 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D FI9785_1286 pgi; pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D FI9785_108 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D FI9785_1197 tuf; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu D FI9785_1459 hit; hit protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D FI9785_1528 hicD; putative L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_337 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_863 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D FI9785_1400 mvaC; mvaC K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D FI9785_378 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D FI9785_793 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D FI9785_1349 galK; galK K00849 galK; galactokinase [EC:2.7.1.6] D FI9785_1405 glnA; glutamine-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D FI9785_486 zwf; zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D FI9785_1334 tpi; tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D FI9785_963 pgam; phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_407 gpm1; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D FI9785_233 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ljf02048] D FI9785_1039 hsdR; type I restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D FI9785_1298 hypothetical protein predicted by Glimmer/Critica K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D FI9785_308 res; type III restriction-modification system restriction subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D FI9785_307 mod; type III restriction-modification system: adenine specific DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D FI9785_1636 hypothetical protein predicted by Glimmer/Critica K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D FI9785_1230 ftsZ; Cell division protein FtsZ. K03531 ftsZ; cell division protein FtsZ D FI9785_1244 mreB; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D FI9785_1265 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D FI9785_1013 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D FI9785_1014 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D FI9785_1220 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D FI9785_1254 NifS/IcsS protein-like protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:ljf04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ljf01504] D FI9785_968 aminoglycoside N3-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81] D FI9785_1471 aph; aminoglycoside 3'-phosphotransferase K00897 aphA; kanamycin kinase [EC:2.7.1.95] D FI9785_97 Elongation factor G (EF-G). K18220 tetM; ribosomal protection tetracycline resistance protein D FI9785_783 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D FI9785_1085 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D FI9785_969 major facilitator superfamily permease K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D FI9785_1792 copY; CopAB ATPase metal-fist type repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D FI9785_1697 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] D FI9785_1774 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] D FI9785_1567 hypothetical protein predicted by Glimmer/Critica K17836 penP; beta-lactamase class A [EC:3.5.2.6] D FI9785_1734 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D FI9785_1733 dltB; DltB protein involved in the biosynthesis of D-alanyl-lipoteichoic acid K03739 dltB; membrane protein involved in D-alanine export D FI9785_1732 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D FI9785_1731 dltD; DltD protein involved in the biosynthesis of D-alanyl-lipoteichoic acid K03740 dltD; D-alanine transfer protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ljf03100] D FI9785_7 FI9785_7 K14218 tRNA-Ala; tRNA Ala D FI9785_50 FI9785_50 K14219 tRNA-Arg; tRNA Arg D FI9785_11 FI9785_11 K14219 tRNA-Arg; tRNA Arg D FI9785_10 FI9785_10 K14219 tRNA-Arg; tRNA Arg D FI9785_44 FI9785_44 K14219 tRNA-Arg; tRNA Arg D FI9785_29 FI9785_29 K14220 tRNA-Asn; tRNA Asn D FI9785_54 FI9785_54 K14220 tRNA-Asn; tRNA Asn D FI9785_41 FI9785_41 K14220 tRNA-Asn; tRNA Asn D FI9785_20 FI9785_20 K14221 tRNA-Asp; tRNA Asp D FI9785_8 FI9785_8 K14221 tRNA-Asp; tRNA Asp D FI9785_37 FI9785_37 K14222 tRNA-Cys; tRNA Cys D FI9785_2 FI9785_2 K14223 tRNA-Gln; tRNA Gln D FI9785_34 FI9785_34 K14223 tRNA-Gln; tRNA Gln D FI9785_39 FI9785_39 K14223 tRNA-Gln; tRNA Gln D FI9785_60 FI9785_60 K14223 tRNA-Gln; tRNA Gln D FI9785_13 FI9785_13 K14224 tRNA-Glu; tRNA Glu D FI9785_17 FI9785_17 K14224 tRNA-Glu; tRNA Glu D FI9785_49 FI9785_49 K14224 tRNA-Glu; tRNA Glu D FI9785_42 FI9785_42 K14225 tRNA-Gly; tRNA Gly D FI9785_5 FI9785_5 K14225 tRNA-Gly; tRNA Gly D FI9785_56 FI9785_56 K14225 tRNA-Gly; tRNA Gly D FI9785_21 FI9785_21 K14225 tRNA-Gly; tRNA Gly D FI9785_57 FI9785_57 K14226 tRNA-His; tRNA His D FI9785_4 FI9785_4 K14227 tRNA-Ile; tRNA Ile D FI9785_55 FI9785_55 K14227 tRNA-Ile; tRNA Ile D FI9785_61 FI9785_61 K14228 tRNA-Leu; tRNA Leu D FI9785_36 FI9785_36 K14228 tRNA-Leu; tRNA Leu D FI9785_9 FI9785_9 K14228 tRNA-Leu; tRNA Leu D FI9785_31 FI9785_31 K14228 tRNA-Leu; tRNA Leu D FI9785_24 FI9785_24 K14228 tRNA-Leu; tRNA Leu D FI9785_6 FI9785_6 K14229 tRNA-Lys; tRNA Lys D FI9785_58 FI9785_58 K14229 tRNA-Lys; tRNA Lys D FI9785_32 FI9785_32 K14230 tRNA-Met; tRNA Met D FI9785_59 FI9785_59 K14230 tRNA-Met; tRNA Met D FI9785_40 FI9785_40 K14230 tRNA-Met; tRNA Met D FI9785_43 FI9785_43 K14230 tRNA-Met; tRNA Met D FI9785_12 FI9785_12 K14231 tRNA-Phe; tRNA Phe D FI9785_47 FI9785_47 K14231 tRNA-Phe; tRNA Phe D FI9785_23 FI9785_23 K14232 tRNA-Pro; tRNA Pro D FI9785_63 FI9785_63 K14232 tRNA-Pro; tRNA Pro D FI9785_28 FI9785_28 K14233 tRNA-Ser; tRNA Ser D FI9785_38 FI9785_38 K14233 tRNA-Ser; tRNA Ser D FI9785_14 FI9785_14 K14233 tRNA-Ser; tRNA Ser D FI9785_16 FI9785_16 K14233 tRNA-Ser; tRNA Ser D FI9785_51 FI9785_51 K14234 tRNA-Thr; tRNA Thr D FI9785_35 FI9785_35 K14234 tRNA-Thr; tRNA Thr D FI9785_53 FI9785_53 K14234 tRNA-Thr; tRNA Thr D FI9785_46 FI9785_46 K14234 tRNA-Thr; tRNA Thr D FI9785_25 FI9785_25 K14234 tRNA-Thr; tRNA Thr D FI9785_62 FI9785_62 K14235 tRNA-Trp; tRNA Trp D FI9785_15 FI9785_15 K14235 tRNA-Trp; tRNA Trp D FI9785_3 FI9785_3 K14236 tRNA-Tyr; tRNA Tyr D FI9785_52 FI9785_52 K14236 tRNA-Tyr; tRNA Tyr D FI9785_22 FI9785_22 K14237 tRNA-Val; tRNA Val D FI9785_33 FI9785_33 K14237 tRNA-Val; tRNA Val D FI9785_1813 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1815 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1816 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_1814 16S_rRNA; 16S rRNA K01977 16SrRNA; 16S ribosomal RNA D FI9785_45 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_19 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_1 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_27 23S_rRNA; 23S rRNA K01980 23SrRNA; 23S ribosomal RNA D FI9785_18 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_26 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_48 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_30 5S_RNA; 5S RNA K01985 5SrRNA; 5S ribosomal RNA D FI9785_1811 bacterial signal recognition particle RNA K01983 ffs; SRP RNA D FI9785_1812 Bacterial RNase P class B K01978 rnpB; M1 RNA D FI9785_1817 Bacterial tmRNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D FI9785_1781 lox; lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2] D FI9785_879 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D FI9785_877 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D FI9785_1045 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D FI9785_517 trxB; trxB K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D FI9785_205 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D FI9785_763 cfa; cyclopropane fatty acid synthase-like protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D FI9785_989 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D FI9785_1570 paiA; Protease synthase and sporulation negative regulatory protein PAI 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D FI9785_1016 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D FI9785_192 unnamed protein product K08728 E2.4.2.6; nucleoside deoxyribosyltransferase [EC:2.4.2.6] D FI9785_1353 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D FI9785_1673 conserved hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D FI9785_212 fruK; fructose-1-phosphate kinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234] D FI9785_734 conserved hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D FI9785_884 hypothetical protein predicted by Glimmer/Critica K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D FI9785_1316 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D FI9785_1354 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D FI9785_1472 pbpX; Penicillin-binding protein K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103] D FI9785_1730 hypothetical protein predicted by Glimmer/Critica K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103] D FI9785_1706 hypothetical protein predicted by Glimmer/Critica K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D FI9785_1772 hypothetical protein predicted by Glimmer/Critica K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D FI9785_1180 epsD; protein-tyrosine-phosphate phosphohydrolase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D FI9785_195 putative serine/tyrosine protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D FI9785_1710 hypothetical protein predicted by Glimmer/Critica K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D FI9785_1674 hypothetical protein predicted by Glimmer/Critica K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D FI9785_1432 conserved hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-] D FI9785_73 conserved hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D FI9785_279 hypothetical protein predicted by Glimmer/Critica K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D FI9785_280 hypothetical protein predicted by Glimmer/Critica K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D FI9785_295 oligo-1,6-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70] D FI9785_1211 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D FI9785_1789 defA; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D FI9785_1377 mycA; myosin-crossreactive streptococcal antigen homologue K10254 ohyA; oleate hydratase [EC:4.2.1.53] D FI9785_526 conserved hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D FI9785_203 hypothetical protein predicted by Glimmer/Critica K17810 asl; D-aspartate ligase [EC:6.3.1.12] D FI9785_1517 pacL2; cation-transporting ATPase PacL2 K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D FI9785_1614 pacL3; cation-transporting ATPase PacL3 K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D FI9785_1250 pacL; cation-transporting ATPase PacL K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D FI9785_1477 cation-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D FI9785_1042 unnamed protein product K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] D FI9785_866 cation-transporting ATPase, E1-E2 family K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D FI9785_1540 putative pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D FI9785_992 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit D FI9785_1001 hypothetical protein predicted by Glimmer/Critica K25232 fakB; fatty acid kinase fatty acid binding subunit D FI9785_1104 degV; conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D FI9785_1633 nrdI; ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction D FI9785_856 hypothetical protein predicted by Glimmer/Critica K15051 endA; DNA-entry nuclease D FI9785_1579 endA; extracellular/cell surface DNA-entry nuclease K15051 endA; DNA-entry nuclease C 99985 Amino acid metabolism C 99986 Glycan metabolism D FI9785_1551 hypothetical protein predicted by Glimmer/Critica K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D FI9785_1126 ribT; conserved hypothetical protein K02859 ribT; riboflavin biosynthesis RibT protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D FI9785_1224 cspB; Cold shock protein B K03704 cspA; cold shock protein D FI9785_1385 arsC; conserved hypothetical protein K16509 spxA; regulatory protein spx C 99974 Translation D FI9785_518 RNA binding protein K07570 GSP13; general stress protein 13 D FI9785_342 hypothetical protein predicted by Glimmer/Critica K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D FI9785_1196 tig; trigger factor K03545 tig; trigger factor D FI9785_1330 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D FI9785_1384 mecA; Adapter protein MecA K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D FI9785_1245 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D FI9785_765 hypothetical protein predicted by Glimmer/Critica K07461 K07461; putative endonuclease D FI9785_1099 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein D FI9785_981 dnaD; DNA replication protein DnaD. K02086 dnaD; DNA replication protein D FI9785_826 ps124; terminase small subunit K07474 xtmA; phage terminase small subunit D FI9785_827 ps125; phage terminase large subunit. K06909 xtmB; phage terminase large subunit D FI9785_1258 conserved hypothetical protein K07478 ycaJ; putative ATPase D FI9785_1484 putative transposase K07482 K07482; transposase, IS30 family D FI9785_190 orfA; OrfA for insertion sequence element IS1223A K07483 K07483; transposase D FI9785_720 orfA; OrfA for insertion sequence element IS1223C K07483 K07483; transposase D FI9785_938 orfA; OrfA for insertion sequence element IS1223D K07483 K07483; transposase D FI9785_983 orfA; OrfA for insertion sequence element IS1223D K07483 K07483; transposase D FI9785_323 tnp1223; OrfA for Insertion element IS1223B K07483 K07483; transposase D FI9785_501 putative transposase K07483 K07483; transposase D FI9785_1479 putative transposase K07484 K07484; transposase D FI9785_84 unnamed protein product K07484 K07484; transposase D FI9785_85 unnamed protein product K07484 K07484; transposase D FI9785_1111 unnamed protein product K07485 K07485; transposase D FI9785_313 unnamed protein product K07485 K07485; transposase D FI9785_1069 transposase K07486 K07486; transposase D FI9785_409 transposase K07486 K07486; transposase D FI9785_411 unnamed protein product K07486 K07486; transposase D FI9785_543 transposase K07491 rayT; REP-associated tyrosine transposase D FI9785_81 tnp; Transposase for insertion sequence element IS1201 K07493 K07493; putative transposase D FI9785_542 transposase K07496 K07496; putative transposase D FI9785_1088 transposase K07496 K07496; putative transposase D FI9785_432 conserved hypothetical protein K07496 K07496; putative transposase D FI9785_191 orfB; OrfB for insertion sequence element IS1223A K07497 K07497; putative transposase D FI9785_719 orfB; OrfB for insertion sequence element IS1223C K07497 K07497; putative transposase D FI9785_937 orfB; OrfB for insertion sequence element IS1223C K07497 K07497; putative transposase D FI9785_984 orfB; OrfB for insertion sequence element IS1223D K07497 K07497; putative transposase D FI9785_324 orfB; OrfB for insertion sequence element IS1223B K07497 K07497; putative transposase D FI9785_500 unnamed protein product K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D FI9785_447 hypothetical protein predicted by Glimmer/Critica K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D FI9785_1718 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D FI9785_1719 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D FI9785_1549 aroP; Aromatic amino acid transport protein aroP K03293 TC.AAT; amino acid transporter, AAT family D FI9785_166 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D FI9785_1713 amino acid permease. K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D FI9785_1724 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D FI9785_663 putative amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D FI9785_79 unnamed protein product K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D FI9785_612 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D FI9785_1072 brnQ; Branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D FI9785_115 Branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D FI9785_578 Sodium-dependent transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth D FI9785_1486 unnamed protein product K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D FI9785_1210 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein D FI9785_887 phoH; PhoH-like protein. K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D FI9785_225 muramidase K07273 acm; lysozyme C 99994 Others D FI9785_643 phoU; phoU K02039 phoU; phosphate transport system protein D FI9785_1452 Copper homeostasis protein, CutC family K06201 cutC; copper homeostasis protein D FI9785_1291 hypothetical protein predicted by Glimmer/Critica K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D FI9785_1383 coiA; conserved hypothetical protein K06198 coiA; competence protein CoiA D FI9785_1453 pheT; Phenylalanyl-tRNA synthetase beta subunit K06878 K06878; tRNA-binding protein D FI9785_1565 hypothetical protein predicted by Glimmer/Critica K06994 K06994; putative drug exporter of the RND superfamily D FI9785_1078 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D FI9785_92 conserved hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D FI9785_1091 hypothetical protein predicted by Glimmer/Critica K07038 K07038; inner membrane protein D FI9785_671 conserved hypothetical protein K07058 K07058; membrane protein D FI9785_134 LemA-like protein K03744 lemA; LemA protein D FI9785_1513 hypothetical protein predicted by Glimmer/Critica K03095 sprL; SprT-like protein D FI9785_516 conserved hypothetical protein K03975 dedA; membrane-associated protein D FI9785_1572 hypothetical protein predicted by Glimmer/Critica K08987 K08987; putative membrane protein D FI9785_1757 hypothetical protein predicted by Glimmer/Critica K08996 yagU; putative membrane protein D FI9785_556 hypothetical protein predicted by Glimmer/Critica K08996 yagU; putative membrane protein D FI9785_1537 psiE; phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE C 99997 Function unknown D FI9785_296 hypothetical protein predicted by Glimmer/Critica K06885 K06885; uncharacterized protein D FI9785_1401 conserved hypothetical protein K06889 K06889; uncharacterized protein D FI9785_954 unnamed protein product K06889 K06889; uncharacterized protein D FI9785_1500 hypothetical protein predicted by Glimmer/Critica K06890 K06890; uncharacterized protein D FI9785_1021 unnamed protein product K06890 K06890; uncharacterized protein D FI9785_255 hypothetical protein predicted by Glimmer/Critica K06950 K06950; uncharacterized protein D FI9785_1594 conserved hypothetical protein K06956 K06956; uncharacterized protein D FI9785_155 conserved hypothetical protein K06973 K06973; uncharacterized protein D FI9785_693 hypothetical protein predicted by Glimmer/Critica K07006 K07006; uncharacterized protein D FI9785_321 conserved hypothetical protein K07078 K07078; uncharacterized protein D FI9785_1776 conserved hypothetical protein K07090 K07090; uncharacterized protein D FI9785_90 conserved hypothetical protein K07118 K07118; uncharacterized protein D FI9785_1137 conserved hypothetical protein K07124 K07124; uncharacterized protein D FI9785_1263 hypothetical protein predicted by Glimmer/Critica K08998 K08998; uncharacterized protein D FI9785_886 hypothetical protein predicted by Glimmer/Critica K09117 K09117; uncharacterized protein D FI9785_207 hypothetical protein predicted by Glimmer/Critica K09155 K09155; uncharacterized protein D FI9785_1376 conserved hypothetical protein K09384 K09384; uncharacterized protein D FI9785_748 ylxM; UPF0122 protein K09787 K09787; uncharacterized protein D FI9785_1128 conserved hypothetical protein K00243 K00243; uncharacterized protein D FI9785_1692 conserved hypothetical protein K09861 K09861; uncharacterized protein D FI9785_1675 hypothetical protein predicted by Glimmer/Critica K09963 K09963; uncharacterized protein D FI9785_1771 conserved hypothetical protein K09963 K09963; uncharacterized protein D FI9785_760 conserved hypothetical protein K09976 K09976; uncharacterized protein D FI9785_1395 yjjG; conserved hypothetical protein K07586 ygaC; uncharacterized protein D FI9785_777 conserved hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024