+D GENES KO #

  KEGG Orthology (KO) - Lactobacillus johnsonii DPC 6026

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ljh00010] D LJP_1230c glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LJP_1085c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D LJP_0507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LJP_1278c triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LJP_1280c glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LJP_1279c phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LJP_0169 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LJP_0351 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LJP_0920 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_0822 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1277c enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1084c pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LJP_0283c L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_0837 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_1491c L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_1525c aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LJP_1291c aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LJP_1290c putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LJP_0155 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D LJP_0188c 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D LJP_0193c 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D LJP_0199c beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D LJP_1665c 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D LJP_1568c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable glucose specific K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D LJP_1597 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, glucose specific K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:ljh00020] D LJP_0835 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LJP_0155 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00030 Pentose phosphate pathway [PATH:ljh00030] D LJP_1230c glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LJP_0456 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LJP_1325 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D LJP_1789c 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LJP_0685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LJP_0605 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D LJP_0614 putative xylulose-5-phosphate K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D LJP_1403 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D LJP_0604 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D LJP_1290c putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LJP_0214 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LJP_0109 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LJP_0382 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12] D LJP_0507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LJP_1085c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:ljh00040] D LJP_0628 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LJP_0685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LJP_1755c class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:ljh00051] D LJP_0014 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LJP_1236c mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D LJP_1755c class II aldolase/adducin domain protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D LJP_1085c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D LJP_1637c fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D LJP_0163 Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D LJP_0507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LJP_1278c triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LJP_1636c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D LJP_0128 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable mannose specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LJP_1580c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D LJP_1710c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D LJP_1579c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable N-acetylgalactosamine specific K02795 manY; mannose PTS system EIIC component D LJP_1396c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_1709c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_0126 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_0127 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probable mannose specific K02796 manZ; mannose PTS system EIID component D LJP_1578c phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probable N-acetylgalactosamine specific K02796 manZ; mannose PTS system EIID component D LJP_1708c phosphoenolpyruvate-dependent sugar phosphotransferase system EIID probable mannose specific K02796 manZ; mannose PTS system EIID component D LJP_1324c hypothetical protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] C 00052 Galactose metabolism [PATH:ljh00052] D LJP_1291c aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D LJP_1293c galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LJP_1292c galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D LJP_1518 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LJP_1299 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LJP_0628 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LJP_1290c putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LJP_1297 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LJP_1298 Beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LJP_0546 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D LJP_1294c beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D LJP_1122c UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LJP_0270 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D LJP_1758c PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D LJP_1757c PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D LJP_1738 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable galactitol specific K02775 gatC; galactitol PTS system EIIC component D LJP_1756c PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D LJP_1760 Tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144] D LJP_1085c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D LJP_0148 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D LJP_1695 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D LJP_0216 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D LJP_1639c alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D LJP_1398c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable mannose specific K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D LJP_0123 putative tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:ljh00500] D LJP_1753c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable beta-glucoside specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D LJP_1694c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, sucrose specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D LJP_1695 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D LJP_0216 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D LJP_1639c alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D LJP_1240c Fructosyltransfearse K20811 inuJ; inulosucrase [EC:2.4.1.9] D LJP_0271 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D LJP_0628 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LJP_0195c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable cellobiose specific K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D LJP_0443 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D LJP_0197c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, probable cellobiose specific K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D LJP_0622 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_1714c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_0441 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D LJP_0190 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_0198c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_0188c 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D LJP_0193c 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D LJP_0199c beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D LJP_1665c 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D LJP_0217 neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D LJP_0218 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8] D LJP_0219 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D LJP_1568c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable glucose specific K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D LJP_1571c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBC, probable arbutin specific K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D LJP_1572c 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D LJP_0560c trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D LJP_1290c putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LJP_1230c glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LJP_0014 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ljh00520] D LJP_1568c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable glucose specific K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D LJP_0124 putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D LJP_1762 glucosamine-6-P isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D LJP_0014 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D LJP_0640 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LJP_1258c phosphoglucomutase/phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D LJP_0213 UDP-N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LJP_1752c N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D LJP_0229 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LJP_1265c UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LJP_1596 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D LJP_0623 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D LJP_1597 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, glucose specific K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D LJP_1290c putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LJP_0628 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LJP_1293c galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LJP_1292c galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D LJP_1518 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LJP_1299 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LJP_1122c UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LJP_0128 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable mannose specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LJP_1580c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D LJP_1710c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D LJP_1579c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable N-acetylgalactosamine specific K02795 manY; mannose PTS system EIIC component D LJP_1396c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_1709c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_0126 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_0127 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probable mannose specific K02796 manZ; mannose PTS system EIID component D LJP_1578c phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probable N-acetylgalactosamine specific K02796 manZ; mannose PTS system EIID component D LJP_1708c phosphoenolpyruvate-dependent sugar phosphotransferase system EIID probable mannose specific K02796 manZ; mannose PTS system EIID component D LJP_1230c glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LJP_1236c mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] C 00620 Pyruvate metabolism [PATH:ljh00620] D LJP_1525c aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LJP_0471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LJP_1241c acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LJP_1268c phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LJP_1084c pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LJP_1369 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D LJP_1790c pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D LJP_0283c L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_0837 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_1491c L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_0055c D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D LJP_0835 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LJP_0907c phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LJP_0155 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ljh00630] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_1353c glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LJP_0272 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LJP_0916 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LJP_0261c putative oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] C 00640 Propanoate metabolism [PATH:ljh00640] D LJP_0471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LJP_1241c acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LJP_1268c phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LJP_0283c L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_0837 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_1491c L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:ljh00650] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_1525c aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LJP_1537 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LJP_1346c hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D LJP_1042c acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LJP_1041c alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:ljh00660] D LJP_1042c acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LJP_1041c alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00562 Inositol phosphate metabolism [PATH:ljh00562] D LJP_0165c Putative oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] D LJP_1278c triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ljh00190] D LJP_1743 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LJP_1744 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LJP_1216c ATP synthase F1 K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LJP_1214c ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LJP_1215c ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LJP_1217c ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LJP_1213c ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LJP_1220c ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LJP_1218c ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LJP_1219c ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LJP_0761c P-type proton motive membrane ATPase-like protein K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D LJP_0987c manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:ljh00710] D LJP_1279c phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LJP_1280c glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LJP_0507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LJP_0605 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D LJP_1278c triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LJP_0685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D LJP_0907c phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LJP_0155 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00720 Other carbon fixation pathways [PATH:ljh00720] D LJP_0907c phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LJP_0835 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_0973 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D LJP_0946c Methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LJP_0670 Methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LJP_1268c phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LJP_0471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LJP_1241c acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:ljh00680] D LJP_0272 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LJP_0920 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_0822 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1277c enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_0907c phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D LJP_0507 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D LJP_1085c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D LJP_0471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LJP_1241c acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LJP_1268c phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LJP_0169 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LJP_0351 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism D LJP_1353c glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism D LJP_0458 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ljh00061] D LJP_0692 acyl carrier protein K02078 acpP; acyl carrier protein D LJP_1317c 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:ljh00071] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_1525c aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:ljh00121] D LJP_0828 conjugated bile salt hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D LJP_1011c conjugated bile salt hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ljh00561] D LJP_0916 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LJP_0691 fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LJP_0991 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LJP_0179 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LJP_0727c 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LJP_1465c hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LJP_1530c hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LJP_1527c hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LJP_1232 hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LJP_0270 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:ljh00564] D LJP_1302c glycerol-3-phosphate dehydrogenase NAD(P)+ K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D LJP_0991 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LJP_0179 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LJP_0727c 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D LJP_1487 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D LJP_1465c hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D LJP_1678c hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D LJP_0486c putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D LJP_0734 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D LJP_0543c hypothetical protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D LJP_0545c hypothetical protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D LJP_1315c CDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D LJP_0757c cardiolipinsynthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D LJP_0101c cardiolipinsynthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:ljh00600] D LJP_1297 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LJP_1298 Beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LJP_0270 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D LJP_1590 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ljh00230] D LJP_1173c ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D LJP_1290c putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LJP_0214 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LJP_0109 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D LJP_0423 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LJP_0755 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D LJP_0509 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LJP_0618 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D LJP_0053c inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LJP_0470 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D LJP_0231c Xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D LJP_0715 DNA polymerase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D LJP_0233 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LJP_0421c guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D LJP_1608c guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LJP_0677 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D LJP_1613 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LJP_0143 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D LJP_1764 deoxyguanosine kinase K25641 dgk2; deoxyguanosine kinase [EC:2.7.1.113] D LJP_0848 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LJP_1330c GTP diphosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D LJP_0422 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LJP_1763 deoxyadenosine kinase K10353 E2.7.1.76; deoxyadenosine kinase [EC:2.7.1.76] D LJP_1380 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D LJP_1087c hypothetical protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D LJP_0325 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:ljh00240] D LJP_0977 carbamoyl-phosphate synthase, pyrimidine-specific, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LJP_0904 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LJP_0976 carbamoyl-phosphate synthase, pyrimidine-specific, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LJP_0903 carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LJP_0901 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LJP_0902 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D LJP_0899 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D LJP_0897c orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D LJP_0898c orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D LJP_0731 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D LJP_0715 DNA polymerase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17] D LJP_0228 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D LJP_1075c cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D LJP_0567c Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D LJP_1221c uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D LJP_0900 pyrimidine operon repressor K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D LJP_0905 pyrimidine operon repressor PyrR1 K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D LJP_1087c hypothetical protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D LJP_0143 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D LJP_1613 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LJP_0204 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D LJP_0407 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D LJP_0374 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LJP_1225c thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D LJP_0758 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ljh00250] D LJP_1642c aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D LJP_0839 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LJP_1702 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D LJP_0141 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D LJP_0422 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D LJP_0423 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D LJP_0901 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D LJP_1537 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D LJP_1353c glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LJP_0977 carbamoyl-phosphate synthase, pyrimidine-specific, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LJP_0904 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LJP_0976 carbamoyl-phosphate synthase, pyrimidine-specific, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LJP_0903 carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LJP_0525 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LJP_0640 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:ljh00260] D LJP_1027 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LJP_1020c Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LJP_0272 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LJP_0916 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D LJP_0169 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LJP_0351 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LJP_0858 L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LJP_0859 L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00270 Cysteine and methionine metabolism [PATH:ljh00270] D LJP_1237c Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LJP_0495 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D LJP_1171c nucleoside phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D LJP_0512c hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D LJP_1576 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LJP_1027 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LJP_1020c Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LJP_0283c L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_0837 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_1491c L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_0858 L-serine dehydratase, beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D LJP_0859 L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:ljh00280] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_1346c hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ljh00290] D LJP_1042c acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00300 Lysine biosynthesis [PATH:ljh00300] D LJP_1027 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LJP_1020c Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LJP_1023c Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LJP_1022c Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D LJP_1028 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LJP_1026c Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D LJP_1025c 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89] D LJP_1021c N-acetyl-L,L-diaminopimelate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LJP_0852c aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LJP_1024c N-acetyl-L,L-diaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D LJP_1643c UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LJP_0278 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ljh00310] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_1537 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:ljh00220] D LJP_0525 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LJP_1353c glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LJP_0977 carbamoyl-phosphate synthase, pyrimidine-specific, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LJP_0904 carbamoylphosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D LJP_0976 carbamoyl-phosphate synthase, pyrimidine-specific, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D LJP_0903 carbamoylphosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] C 00330 Arginine and proline metabolism [PATH:ljh00330] D LJP_1781 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D LJP_0938 hypothetical protein K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D LJP_0062 prolinase PepPN K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism D LJP_0059 hypothetical protein K17363 urdA; urocanate reductase [EC:1.3.99.33] C 00350 Tyrosine metabolism [PATH:ljh00350] D LJP_1525c aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D LJP_1537 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism C 00380 Tryptophan metabolism D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis D LJP_1688c hypothetical protein K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:ljh00430] D LJP_1268c phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D LJP_0471 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D LJP_1241c acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:ljh00450] D LJP_1237c Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D LJP_1017c selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D LJP_1301c thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D LJP_0207 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ljh00460] D LJP_0839 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D LJP_1702 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D LJP_0272 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ljh00470] D LJP_0281 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LJP_0114 D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LJP_1721c D-alanine--D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LJP_1719c D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LJP_0525 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LJP_0469 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LJP_1184c UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LJP_1642c aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D LJP_1028 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D LJP_1026c Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:ljh00480] D LJP_0637 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LJP_0052 hypothetical protein K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D LJP_1789c 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D LJP_0456 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LJP_1781 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:ljh00511] D LJP_1297 beta-galactosidase large subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D LJP_1298 Beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:ljh00542] D LJP_1312c UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ljh00541] D LJP_0628 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D LJP_1518 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LJP_1299 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D LJP_1122c UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D LJP_1113c glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LJP_1114c dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LJP_1112c dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LJP_1111c dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D LJP_1236c mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D LJP_0213 UDP-N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D LJP_0623 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:ljh00550] D LJP_0229 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LJP_1265c UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LJP_1405c UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LJP_1184c UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LJP_1643c UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LJP_0114 D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LJP_0278 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LJP_0733 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LJP_0499c Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LJP_1185c phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LJP_1183c UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LJP_0965c penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LJP_1420c penicillin-binding protein 1F K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LJP_1186c penicillin-binding protein 2B K08724 pbpB; penicillin-binding protein 2B D LJP_1361c penicillin-binding protein 2B K21465 pbpA; penicillin-binding protein A D LJP_0505 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LJP_1226 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D LJP_1699 hypothetical protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D LJP_0484c penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B C 00552 Teichoic acid biosynthesis [PATH:ljh00552] D LJP_0499c Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LJP_1312c UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D LJP_1486c teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D LJP_1477c hypothetical protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D LJP_1721c D-alanine--D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LJP_1719c D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LJP_1720c D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export D LJP_1718c D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein D LJP_0373 transcriptional attenuator, lytR family K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D LJP_1134c transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D LJP_1623c transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D LJP_0178 transcriptional regulator, lytR family K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D LJP_1527c hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LJP_1232 hypothetical protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D LJP_1530c hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LJP_1529c glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ljh00543] D LJP_1312c UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ljh00730] D LJP_1698 phosphomethylpyrimidine kinase (HMP-phosphate kinase) K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D LJP_1170c cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1201c cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1200c putative thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D LJP_0684 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LJP_0686 hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D LJP_0325 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ljh00740] D LJP_0745 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D LJP_1660c flavin reductase K22393 nfr1; flavin reductase (NADH) subunit 1 [EC:1.5.1.36] D LJP_1659c flavin reductase K22394 nfr2; flavin reductase (NADH) subunit 2 [EC:1.5.1.36] D LJP_1173c ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:ljh00750] D LJP_0656 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] C 00760 Nicotinate and nicotinamide metabolism [PATH:ljh00760] D LJP_1483c hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D LJP_1377c putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D LJP_1482c NH(3)-dependent NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D LJP_0339c NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D LJP_0099c hypothetical protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D LJP_1329c putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D LJP_1537 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:ljh00770] D LJP_1042c acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D LJP_1589c panthothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D LJP_1250c DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D LJP_1156c phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D LJP_1391c dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D LJP_0280 acyl carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:ljh00780] D LJP_1317c 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:ljh00790] D LJP_0759 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LJP_1196c hypothetical protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] C 00670 One carbon pool by folate [PATH:ljh00670] D LJP_0759 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D LJP_0973 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D LJP_0946c Methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LJP_0670 Methylenetetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D LJP_0272 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D LJP_0680 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LJP_0758 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D LJP_1359c hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ljh00130] D LJP_0061 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D LJP_1747 hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D LJP_0238c NADPH-dependent FMN reductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D LJP_0343 nucleoside-diphosphate-sugar epimerase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ljh00900] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_1346c hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D LJP_1347c hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D LJP_0957c mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D LJP_0955c Phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D LJP_0956c mevalonate pyrophosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D LJP_0954c isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D LJP_0673 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D LJP_0733 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ljh00523] D LJP_1113c glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LJP_1114c dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LJP_1112c dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LJP_1111c dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:ljh01054] D LJP_1642c aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D LJP_1114c dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D LJP_1679c beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LJP_1543c hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:ljh00261] D LJP_1027 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D LJP_1020c Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D LJP_1023c Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D LJP_1022c Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ljh00521] D LJP_1290c putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D LJP_1113c glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LJP_1114c dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D LJP_1112c dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D LJP_1111c dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:ljh00525] D LJP_1113c glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D LJP_1114c dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D LJP_1317c 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D LJP_0692 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D LJP_0495 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:ljh00362] D LJP_0658 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D LJP_1522c hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D LJP_1369 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:ljh00625] D LJP_1525c aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D LJP_0658 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D LJP_0658 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:ljh00626] D LJP_1525c aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ljh03020] D LJP_0297 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LJP_0298 DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LJP_0330 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LJP_0678 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LJP_0227 DNA-directed RNA polymerase delta chain K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ljh03010] D LJP_1074c 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LJP_0729 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LJP_0310 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LJP_1203 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LJP_0321 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LJP_0007 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LJP_0301 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LJP_0318 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LJP_0337 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LJP_0303 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LJP_0329 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LJP_0300 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LJP_0328 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LJP_0171c 30S ribosomal protein S14-3 K02954 RP-S14; small subunit ribosomal protein S14 D LJP_0317 30S ribosomal protein S14A K02954 RP-S14; small subunit ribosomal protein S14 D LJP_1150c 30S ribosomal protein S15P/S13E K02956 RP-S15; small subunit ribosomal protein S15 D LJP_0710 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LJP_0313 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LJP_0009 30S ribosomal protein S19 K02963 RP-S18; small subunit ribosomal protein S18 D LJP_0308 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LJP_1151 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LJP_0862 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LJP_0390 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LJP_0307 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LJP_0304 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LJP_0305 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LJP_0316 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LJP_0319 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LJP_0395 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LJP_0012 50S ribosomal protein L10 K02939 RP-L9; large subunit ribosomal protein L9 D LJP_0394 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LJP_0389 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LJP_0336 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LJP_0314 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LJP_0323 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LJP_0311 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LJP_0331 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LJP_0320 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LJP_0713 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LJP_1381c 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LJP_0664 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LJP_0309 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LJP_0306 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LJP_0315 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LJP_0665 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LJP_0687c 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LJP_0312 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LJP_0322 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LJP_0277 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LJP_1088c 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LJP_1360c 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LJP_0386 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LJP_1795c LSU ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LJP_1382c 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LJP_0327 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LJP_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0012c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0006c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0009c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0005c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0008c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0011c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0007c 5S RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0004c 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0010c 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ljh00970] D LJP_T0055c tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LJP_T0013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LJP_T0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LJP_T0020 tRNA-OTHER K14219 tRNA-Arg; tRNA Arg D LJP_T0047c tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LJP_T0009 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LJP_T0026c tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LJP_T0054c tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LJP_T0034c tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LJP_T0042c tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LJP_T0028c tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LJP_T0022c tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LJP_T0024c tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LJP_T0018c tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LJP_T0029c tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LJP_T0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LJP_T0011 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LJP_T0037c tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LJP_T0019c tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LJP_T0007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LJP_T0049c tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LJP_T0006c tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LJP_T0040c tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LJP_T0030c tRNA-His K14226 tRNA-His; tRNA His D LJP_T0039c tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LJP_T0056c tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LJP_T0051c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T0021c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T00211c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T0027c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T0048c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T0003c tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LJP_T0004c tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LJP_T0052c tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LJP_T0044c tRNA-Met K14230 tRNA-Met; tRNA Met D LJP_T0045c tRNA-Met K14230 tRNA-Met; tRNA Met D LJP_T0035c tRNA-Met K14230 tRNA-Met; tRNA Met D LJP_T0043c tRNA-Met K14230 tRNA-Met; tRNA Met D LJP_T0033c tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LJP_T0041c tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LJP_T0046c tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LJP_T0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LJP_T0010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LJP_T0038c tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LJP_T0015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LJP_T0036c tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LJP_T0050c tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0002 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0025c tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0031c tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LJP_T0023c tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LJP_T0032c tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LJP_T0012 tRNA-Val K14237 tRNA-Val; tRNA Val D LJP_T0053c tRNA-Val K14237 tRNA-Val; tRNA Val D LJP_0376 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LJP_1467c glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LJP_1466c glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LJP_1468c Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LJP_0460 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LJP_0851 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LJP_0962 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LJP_0868 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LJP_0869 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LJP_1387c threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LJP_1532c seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LJP_0377 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LJP_0207 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LJP_0680 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D LJP_1197c valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LJP_0500 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LJP_1175c isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LJP_0295 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LJP_0506 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LJP_0736 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LJP_0850 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LJP_1366c phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LJP_1365c phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LJP_0181 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LJP_0203 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ljh03060] D LJP_0324 preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY D LJP_0387 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D LJP_1276c preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LJP_0455 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D LJP_1793c stage III sporulation protein J precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_1370 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_0363 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LJP_1307c preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LJP_0709 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LJP_0701 cell division protein K03110 ftsY; fused signal recognition particle receptor D LJP_0714c signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LJP_0889c signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LJP_0974 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ljh04122] D LJP_1170c cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1201c cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1168c putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LJP_1200c putative thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:ljh03018] D LJP_0920 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_0822 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1277c enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1275c ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LJP_0279 putative RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LJP_0986c ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LJP_1313c hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D LJP_1163 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LJP_1149c hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LJP_1550c hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LJP_1085c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D LJP_0750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D LJP_0448 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] B B 09124 Replication and repair C 03030 DNA replication [PATH:ljh03030] D LJP_1559c DNA polymerase III, alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_1266 DNA-directed DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_1086c DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LJP_0737 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LJP_0403 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LJP_0409 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LJP_1152c hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LJP_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LJP_0013 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LJP_0870 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D LJP_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LJP_0104 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LJP_1057c ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LJP_1393c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LJP_1470c NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ljh03410] D LJP_0964 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LJP_1269c uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LJP_0095c 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D LJP_1392c formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LJP_0515 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LJP_0716 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LJP_1598c exodeoxyribonuclease A K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LJP_0043 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LJP_1393c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LJP_0754 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LJP_1470c NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ljh03420] D LJP_0285 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LJP_1008c excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D LJP_1288c excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LJP_1289c excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LJP_1094c excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D LJP_1471c ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LJP_1592c hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LJP_1393c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LJP_1470c NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ljh03430] D LJP_0451 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LJP_0465 mismatch repair ATPase K07456 mutS2; DNA mismatch repair protein MutS2 D LJP_1787 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2 D LJP_0452 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D LJP_1471c ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LJP_1592c hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LJP_0671 exonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LJP_0672 exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LJP_0754 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LJP_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LJP_1086c DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LJP_0737 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LJP_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LJP_0403 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LJP_1152c hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LJP_0409 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LJP_1559c DNA polymerase III, alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_1266 DNA-directed DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_1470c NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ljh03440] D LJP_0754 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LJP_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LJP_0004 recombination protein F K03629 recF; DNA replication and repair protein RecF D LJP_0867 DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D LJP_0405 recombination protein RecR K06187 recR; recombination protein RecR D LJP_1314c RecA protein K03553 recA; recombination protein RecA D LJP_1393c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LJP_0453 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LJP_0454 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LJP_0690 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LJP_1165c exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LJP_1086c DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LJP_0737 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LJP_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LJP_0403 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LJP_1152c hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LJP_0409 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LJP_1559c DNA polymerase III, alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_1266 DNA-directed DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_0679 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ljh02010] D LJP_1261c ABC transporter solute-binding component K11069 potD; spermidine/putrescine transport system substrate-binding protein D LJP_1262c ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein D LJP_1263c ABC transporter permease component K11071 potB; spermidine/putrescine transport system permease protein D LJP_1264c ABC transporter ATPase component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D LJP_0630 ABC transporter permease component K05845 opuC; osmoprotectant transport system substrate-binding protein D LJP_0629 ABC transporter ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D LJP_0220 multiple sugar ABC transporter ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D LJP_1553c ABC transporter ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D LJP_0221 hypothetical protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D LJP_0222 multiple sugar ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D LJP_0223 multiple sugar ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D LJP_1399 putative ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D LJP_0947 high affinity ribose transport protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D LJP_0595 ABC transporter solute-binding component K02040 pstS; phosphate transport system substrate-binding protein D LJP_0596 ABC transporter permease component K02037 pstC; phosphate transport system permease protein D LJP_0597 Phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein D LJP_0598 Phosphate ABC transporter, permease protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LJP_0599 Phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LJP_1748 hypothetical protein K02044 phnD; phosphonate transport system substrate-binding protein D LJP_0135 putative ABC transporter K02044 phnD; phosphonate transport system substrate-binding protein D LJP_0137 phosphate/phosphonate ABC transporter permease component K02042 phnE; phosphonate transport system permease protein D LJP_0138 phosphate/phosphonate ABC transporter permease component K02042 phnE; phosphonate transport system permease protein D LJP_0136 phosphate/phosphonate ABC transporter ATPase component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D LJP_0554 Glutamine ABC transporter, periplasmic glutamine-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D LJP_0556 glutamine ABC transporter solute-binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D LJP_0558 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LJP_0557 Glutamine transport system permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LJP_0555 glutamine ABC transporter ATPase component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D LJP_0593 ABC transporter ATPase component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D LJP_0094c ABC transporter permease component K17073 lysX1; putative lysine transport system substrate-binding protein D LJP_0093c ABC transporter ATPase component K17076 lysY; putative lysine transport system ATP-binding protein D LJP_0832 putative D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D LJP_0834 ABC transporter permease component K02072 metI; D-methionine transport system permease protein D LJP_0833 ABC transporter ATPase component K02071 metN; D-methionine transport system ATP-binding protein D LJP_1456 ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LJP_0334 ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LJP_0079c ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LJP_0332 ABC transporter ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LJP_0333 ABC transporter ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LJP_0248 putative ABC transporter K11051 cylB; multidrug/hemolysin transport system permease protein D LJP_0247 ABC transporter ATPase component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D LJP_1448c major facilitator superfamily permease K20491 nisE; lantibiotic transport system permease protein D LJP_1449c ABC transporter ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein D LJP_0720 ABC transporter ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_0723 ABC transporter ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_1000c ABC transporter ATPase and permease components K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LJP_0048 putative ABC transporter K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LJP_0552 ABC transporter ATPase and permease components K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_0553 ABC transporter ATPase and permease components K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_1647c ABC transporter ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_1646c ABC transporter ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_0571 lactacin F ABC transporter permease component K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D LJP_0581 lactacin F ABC transporter permease component K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D LJP_1746 ABC transporter ATPase and permease components K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D LJP_1745 ABC transporter ATPase and permease components K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D LJP_1044c ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D LJP_0746 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:ljh02060] D LJP_1336c phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LJP_1337c phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D LJP_1568c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable glucose specific K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D LJP_1597 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, glucose specific K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D LJP_1753c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable beta-glucoside specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D LJP_1694c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, sucrose specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D LJP_0562 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable trhalose specific K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D LJP_1666c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable beta-glucosides specific K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D LJP_1571c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBC, probable arbutin specific K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D LJP_0195c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable cellobiose specific K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D LJP_0443 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D LJP_0197c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, probable cellobiose specific K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D LJP_0622 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_1714c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_0441 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D LJP_0190 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_0198c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_0128 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable mannose specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LJP_1580c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D LJP_1710c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D LJP_1579c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable N-acetylgalactosamine specific K02795 manY; mannose PTS system EIIC component D LJP_1396c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_1709c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_0126 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_0127 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probable mannose specific K02796 manZ; mannose PTS system EIID component D LJP_1578c phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probable N-acetylgalactosamine specific K02796 manZ; mannose PTS system EIID component D LJP_1708c phosphoenolpyruvate-dependent sugar phosphotransferase system EIID probable mannose specific K02796 manZ; mannose PTS system EIID component D LJP_1398c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable mannose specific K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D LJP_1324c hypothetical protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D LJP_1758c PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D LJP_1757c PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D LJP_1738 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable galactitol specific K02775 gatC; galactitol PTS system EIIC component D LJP_1756c PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D LJP_0131 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable galactitol K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D LJP_1636c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D LJP_1637c fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D LJP_0163 Tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:ljh03070] D LJP_0387 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D LJP_1276c preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LJP_0324 preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY D LJP_0455 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D LJP_1793c stage III sporulation protein J precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_1370 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_0363 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LJP_1307c preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LJP_0701 cell division protein K03110 ftsY; fused signal recognition particle receptor D LJP_0709 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:ljh02020] D LJP_0595 ABC transporter solute-binding component K02040 pstS; phosphate transport system substrate-binding protein D LJP_0077 HtrA-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D LJP_0073 two-component system histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LJP_0072 two-component system response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D LJP_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LJP_1721c D-alanine--D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LJP_1720c D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export D LJP_1719c D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LJP_1718c D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein D LJP_1371c two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LJP_1372c two-component regulatory system response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D LJP_1449c ABC transporter ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein D LJP_1448c major facilitator superfamily permease K20491 nisE; lantibiotic transport system permease protein D LJP_0579 lactacin F two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0050 Two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0569 Lactacin F two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0051 Two-component response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D LJP_0580 lactacin F two-component system response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D LJP_0570 lactacin F two-component system response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D LJP_1353c glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_0525 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D LJP_1743 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D LJP_1744 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D LJP_1143c protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D LJP_0623 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D LJP_1781 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ljh02024] D LJP_1576 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D LJP_0529c hypothetical protein K20265 gadC; glutamate:GABA antiporter D LJP_0358c putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter D LJP_0532c hypothetical protein K20265 gadC; glutamate:GABA antiporter D LJP_0057 hypothetical protein K20265 gadC; glutamate:GABA antiporter D LJP_0579 lactacin F two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0050 Two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0569 Lactacin F two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0051 Two-component response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D LJP_0580 lactacin F two-component system response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D LJP_0570 lactacin F two-component system response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D LJP_0571 lactacin F ABC transporter permease component K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D LJP_0581 lactacin F ABC transporter permease component K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D LJP_0573 lactacin F transporter protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D LJP_0582 lactacin F transporter auxillary protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D LJP_0647c ABC transporter solute-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LJP_1581c Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LJP_0697 oligopeptide ABC transporter solute-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LJP_0698 oligopeptide ABC transporter solute-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LJP_0695 oligopeptide ABC transporter permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D LJP_0696 oligopeptide ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D LJP_0693 Oligopeptide transport ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D LJP_0694 oligopeptide ABC transporter ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein D LJP_0148 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] D LJP_1793c stage III sporulation protein J precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_1370 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_0387 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D LJP_1276c preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LJP_0324 preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY D LJP_0455 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D LJP_0363 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LJP_1307c preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LJP_0701 cell division protein K03110 ftsY; fused signal recognition particle receptor D LJP_0709 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LJP_0241c Transcriptional regulator, xre family K20391 plcR; HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes D LJP_1449c ABC transporter ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein D LJP_1448c major facilitator superfamily permease K20491 nisE; lantibiotic transport system permease protein C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D LJP_1399 putative ABC transporter K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly D LJP_0871 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D LJP_0920 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_0822 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1277c enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ljh01501] D LJP_1776 CopAB ATPases metal-fist type repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D LJP_1679c beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LJP_1543c hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LJP_1000c ABC transporter ATPase and permease components K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LJP_0048 putative ABC transporter K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LJP_0965c penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LJP_0484c penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B D LJP_1420c penicillin-binding protein 1F K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:ljh01502] D LJP_0114 D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LJP_0281 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LJP_0278 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D LJP_1185c phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LJP_1183c UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ljh01503] D LJP_0077 HtrA-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D LJP_1721c D-alanine--D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LJP_1720c D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export D LJP_1719c D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LJP_1718c D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ljh01000] C 01001 Protein kinases [BR:ljh01001] D LJP_0683 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D LJP_1132c putative tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D LJP_0073 two-component system histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LJP_1371c two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LJP_0579 lactacin F two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0050 Two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0569 Lactacin F two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ljh01009] D LJP_1085c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D LJP_0682 phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:ljh01002] D LJP_0974 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D LJP_0528c aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LJP_0531c aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LJP_0372c aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LJP_0649 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LJP_0182 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LJP_0184c aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D LJP_1732c pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D LJP_0233 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D LJP_1704c amino acid transporter K07010 K07010; putative glutamine amidotransferase D LJP_1691 hypothetical protein K07010 K07010; putative glutamine amidotransferase D LJP_0571 lactacin F ABC transporter permease component K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D LJP_0581 lactacin F ABC transporter permease component K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D LJP_1607c Cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LJP_0640 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D LJP_0141 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D LJP_0344c hypothetical protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D LJP_0828 conjugated bile salt hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D LJP_1011c conjugated bile salt hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D LJP_0753 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D LJP_0267c dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LJP_0530c dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LJP_0548 hypothetical protein K08659 pepDA; dipeptidase [EC:3.4.-.-] D LJP_0702 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LJP_1664 putative dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LJP_1554c dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D LJP_1740c hypothetical protein K07052 K07052; CAAX protease family protein D LJP_1384c hypothetical protein K07052 K07052; CAAX protease family protein D LJP_0637 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D LJP_1624 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D LJP_0912 neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D LJP_0153 endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-] D LJP_0485c Xaa-His dipeptidase K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-] D LJP_1563c peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D LJP_0883 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D LJP_1024c N-acetyl-L,L-diaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D LJP_0626 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D LJP_0666 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D LJP_0290 cell division protein FtsH-like protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LJP_1107c putative protease htpX-like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D LJP_0083c putative protease htpX-like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D LJP_0735 putative protease eep K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D LJP_0077 HtrA-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D LJP_0505 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LJP_1283 ATP-dependent clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D LJP_0636c Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11] D LJP_1155c hypothetical protein K07177 K07177; Lon-like protease D LJP_0717c LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D LJP_0714c signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LJP_0889c signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D LJP_0062 prolinase PepPN K01259 pip; proline iminopeptidase [EC:3.4.11.5] D LJP_1059c DNA protecting protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D LJP_1358c hypothetical protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D LJP_1052c ATP-dependent protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] C 01003 Glycosyltransferases [BR:ljh01003] D LJP_1530c hypothetical protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D LJP_1529c glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-] D LJP_0965c penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LJP_0484c penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B D LJP_1420c penicillin-binding protein 1F K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LJP_1486c teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D LJP_1312c UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ljh01005] D LJP_1312c UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D LJP_0173 bactoprenol glucosyl transferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ljh01011] D LJP_0229 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D LJP_1265c UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D LJP_1405c UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D LJP_1184c UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D LJP_1643c UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D LJP_0114 D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D LJP_0281 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D LJP_0469 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D LJP_1185c phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D LJP_1183c UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D LJP_0499c Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D LJP_0965c penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D LJP_0484c penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B D LJP_1420c penicillin-binding protein 1F K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4] D LJP_1186c penicillin-binding protein 2B K08724 pbpB; penicillin-binding protein 2B D LJP_1361c penicillin-binding protein 2B K21465 pbpA; penicillin-binding protein A D LJP_0505 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D LJP_1607c Cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D LJP_0753 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D LJP_1364c hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:ljh01004] D LJP_1317c 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D LJP_1590 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D LJP_0691 fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D LJP_0991 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LJP_0179 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D LJP_0727c 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:ljh01008] D LJP_1642c aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:ljh01006] D LJP_0673 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D LJP_0733 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D LJP_1354c tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LJP_1747 hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:ljh01007] D LJP_0376 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LJP_0181 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LJP_0203 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LJP_0377 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LJP_0506 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LJP_0207 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LJP_1175c isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LJP_1197c valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LJP_0500 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LJP_0295 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LJP_0851 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LJP_0962 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LJP_0850 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LJP_0868 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LJP_0869 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LJP_1532c seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LJP_0736 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LJP_1387c threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LJP_0460 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LJP_1366c phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LJP_1365c phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LJP_1021c N-acetyl-L,L-diaminopimelate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LJP_0852c aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D LJP_1237c Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ljh00194] D LJP_1213c ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D LJP_1214c ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D LJP_1215c ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D LJP_1216c ATP synthase F1 K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D LJP_1217c ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D LJP_1218c ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b D LJP_1219c ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c D LJP_1220c ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ljh03000] D LJP_0988c hypothetical protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D LJP_0058 hypothetical protein K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D LJP_1759 Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D LJP_1638c hypothetical protein K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D LJP_0613 transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D LJP_0483 catabolite control protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LJP_1296c lactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D LJP_1696 sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D LJP_0191 putative transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D LJP_0194c transcriptional regulator, GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D LJP_1488c transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D LJP_1404 hypothetical protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D LJP_0122 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D LJP_1427c hypothetical protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D LJP_0346c putative transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D LJP_0564 Transcriptional regulator PadR-like protein K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D LJP_1595c putative transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D LJP_1776 CopAB ATPases metal-fist type repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D LJP_0241c Transcriptional regulator, xre family K20391 plcR; HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes D LJP_0212 PUR operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D LJP_0438 redox-sensitive transcriptional regulator K01926 rex; redox-sensing transcriptional repressor D LJP_0771 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator D LJP_1667c hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator D LJP_1651c chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LJP_1653c putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LJP_0748 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D LJP_1281c putative transcriptional regulator K05311 cggR; central glycolytic genes regulator D LJP_0900 pyrimidine operon repressor K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D LJP_0905 pyrimidine operon repressor PyrR1 K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D LJP_1390c transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D LJP_1189c cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ljh03021] D LJP_0330 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LJP_0297 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LJP_0298 DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LJP_0227 DNA-directed RNA polymerase delta chain K03048 rpoE; DNA-directed RNA polymerase subunit delta D LJP_0678 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LJP_0871 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D LJP_0380 DNA-directed RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor D LJP_0739 N utilization substance protein A-like protein K02600 nusA; transcription termination/antitermination protein NusA D LJP_0669 hypothetical protein K03625 nusB; transcription antitermination protein NusB D LJP_0388 transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D LJP_1363c transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D LJP_0186 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:ljh03019] D LJP_0699 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LJP_1163 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LJP_1149c hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LJP_1550c hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D LJP_1313c hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D LJP_1275c ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D LJP_1416c hypothetical protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D LJP_0279 putative RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LJP_0459 putative RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D LJP_0986c ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LJP_0920 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_0822 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1277c enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1085c 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D LJP_0750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D LJP_0448 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LJP_1286c hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:ljh03011] D LJP_1074c 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D LJP_0729 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D LJP_0310 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D LJP_1203 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D LJP_0321 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D LJP_0007 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D LJP_0301 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D LJP_0318 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D LJP_0337 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D LJP_0303 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D LJP_0329 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D LJP_0300 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D LJP_0328 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D LJP_0171c 30S ribosomal protein S14-3 K02954 RP-S14; small subunit ribosomal protein S14 D LJP_0317 30S ribosomal protein S14A K02954 RP-S14; small subunit ribosomal protein S14 D LJP_1150c 30S ribosomal protein S15P/S13E K02956 RP-S15; small subunit ribosomal protein S15 D LJP_0710 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D LJP_0313 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D LJP_0009 30S ribosomal protein S19 K02963 RP-S18; small subunit ribosomal protein S18 D LJP_0308 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D LJP_1151 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D LJP_0862 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D LJP_0390 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D LJP_0307 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D LJP_0304 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D LJP_0305 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D LJP_0316 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D LJP_0319 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D LJP_0012 50S ribosomal protein L10 K02939 RP-L9; large subunit ribosomal protein L9 D LJP_0394 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D LJP_0389 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D LJP_0395 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D LJP_0336 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D LJP_0314 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D LJP_0323 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D LJP_0311 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D LJP_0331 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D LJP_0320 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D LJP_0713 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D LJP_1381c 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D LJP_0664 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D LJP_0309 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D LJP_0306 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D LJP_0315 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D LJP_0665 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D LJP_0687c 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D LJP_0312 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D LJP_0322 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D LJP_0277 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D LJP_1088c 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D LJP_1360c 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LJP_0386 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D LJP_1795c LSU ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D LJP_1382c 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D LJP_0327 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D LJP_R0007c 5S RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0004c 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0010c 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0012c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0006c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0009c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0005c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0008c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0011c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ljh03009] D LJP_0699 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LJP_0866 GTP-binding protein era protein K03595 era; GTPase D LJP_1093c Spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] D LJP_0739 N utilization substance protein A-like protein K02600 nusA; transcription termination/antitermination protein NusA D LJP_0669 hypothetical protein K03625 nusB; transcription antitermination protein NusB D LJP_0388 transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG D LJP_1199c ribosomal large subunit pseudouridine synthase B K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D LJP_0210 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D LJP_0681 RNA methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LJP_0398 putative RNA methylase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D LJP_1157c putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D LJP_1654c glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LJP_1188c S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D LJP_0411 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LJP_0674 hemolysin-like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D LJP_0379 RNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D LJP_0078 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D LJP_1447c hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D LJP_1078c ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D LJP_1328c pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LJP_0975 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LJP_1421 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LJP_0027c N-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D LJP_0415 Acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D LJP_0937 putative acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D LJP_0711 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM D LJP_0846 putative methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D LJP_0462 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D LJP_0378 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D LJP_0279 putative RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D LJP_0459 putative RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D LJP_0684 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D LJP_1073c putative GTP-binding protein EngA K03977 engA; GTPase D LJP_1058c hypothetical protein K14540 rbgA; ribosome biogenesis GTPase A D LJP_1605 GTP-binding protein K03665 hflX; GTPase D LJP_1378c hypothetical protein K06948 yqeH; 30S ribosome assembly GTPase D LJP_1222c hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LJP_0848 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D LJP_0743 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D LJP_0738 hypothetical protein K09748 rimP; ribosome maturation factor RimP D LJP_0003 hypothetical protein K14761 rlbA; ribosome-associated protein D LJP_1375c Iojap-related protein K09710 ybeB; ribosome-associated protein D LJP_0865 putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor D LJP_1308c ribosome-associated protein K05808 hpf; ribosome hibernation promoting factor D LJP_1649c putative GTP-binding protein K06942 ychF; ribosome-binding ATPase D LJP_1373c hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ljh03016] D LJP_1091c beta-lactamase superfamily hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11] D LJP_1063c poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D LJP_0736 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LJP_1175c isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LJP_0500 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LJP_0207 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LJP_0506 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LJP_0295 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LJP_0851 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LJP_0460 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LJP_0962 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LJP_1387c threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LJP_1532c seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LJP_0377 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LJP_1197c valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LJP_0850 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LJP_1366c phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LJP_1365c phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LJP_0181 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LJP_0203 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LJP_0849 D-Tyr-tRNATyr deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D LJP_1412 histidine triad HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LJP_1409c tRNA (guanine-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D LJP_0335 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D LJP_0744 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D LJP_1170c cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1201c cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1222c hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LJP_1354c tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LJP_1792c putative tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D LJP_1791c glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LJP_1794c ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D LJP_0868 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LJP_0869 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LJP_0376 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D LJP_0845c hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D LJP_0402 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D LJP_0294 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D LJP_1054c glucose inhibited division protein A K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D LJP_0712 tRNA (Guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D LJP_0881 putative methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D LJP_1322c rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D LJP_1368c rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D LJP_1168c putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LJP_1200c putative thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D LJP_0289 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D LJP_0414 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D LJP_0416 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D LJP_1267c hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D LJP_1374c hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D LJP_1275c ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C 03012 Translation factors [BR:ljh03012] D LJP_0742 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LJP_1383c translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LJP_0435c ABC transporter ATPase component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D LJP_0730 elongation factor Ts K02357 tsf; elongation factor Ts D LJP_1147c elongation factor Tu K02358 tuf; elongation factor Tu D LJP_0302 elongation factor G K02355 fusA; elongation factor G D LJP_1224c peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D LJP_0732 ribosome recycling factor K02838 frr; ribosome recycling factor D LJP_1223c hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D LJP_0284 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D LJP_0326 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D LJP_1588c elongation factor P K02356 efp; elongation factor P D LJP_0667 elongation factor P K02356 efp; elongation factor P D LJP_1306c peptide chain release factor 2 (RF-2) K02836 prfB; peptide chain release factor 2 D LJP_1339c peptide chain release factor K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ljh03110] D LJP_0296 ATP-dependent clp protease ATP-binding subunit clpA-like protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D LJP_1712c ATP-dependent clp protease ATP-binding subunit clpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D LJP_1338 ATP-dependent clp protease ATP-binding subunit clpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE D LJP_1145c ATP-dependent clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D LJP_1051c ATP-dependent protease ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D LJP_0750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D LJP_0448 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LJP_0751 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D LJP_0293 heat shock protein Hsp33 K04083 hslO; molecular chaperone Hsp33 D LJP_0749 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D LJP_0187c heat shock protein K13993 HSP20; HSP20 family protein D LJP_0447 co-chaperonin GroES K04078 groES; chaperonin GroES D LJP_0077 HtrA-like serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D LJP_0290 cell division protein FtsH-like protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D LJP_1220c ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a D LJP_0985c peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D LJP_1415 protease maturation protein precursor K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D LJP_0466 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:ljh04131] D LJP_1280c glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LJP_0169 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LJP_0351 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LJP_1084c pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:ljh03032] D LJP_0104 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D LJP_1072c DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LJP_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LJP_0013 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D LJP_0870 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D LJP_1389c Helicase loader DnaB K03346 dnaB; replication initiation and membrane attachment protein D LJP_1388c Helicase loader DnaI K11144 dnaI; primosomal protein DnaI D LJP_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LJP_1086c DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LJP_0737 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LJP_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LJP_1152c hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LJP_0409 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LJP_1559c DNA polymerase III, alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_1266 DNA-directed DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_0403 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LJP_1057c ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D LJP_1393c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LJP_1470c NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LJP_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LJP_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D LJP_0989c topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LJP_0990c topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LJP_1055c DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ljh03036] D LJP_0699 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D LJP_1072c DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LJP_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D LJP_0603 non-heme iron-containing ferritin K04047 dps; starvation-inducible DNA-binding protein D LJP_0700 chromosome partitioning protein Smc K03529 smc; chromosome segregation protein D LJP_1080c hypothetical protein K05896 scpA; segregation and condensation protein A D LJP_1079c hypothetical protein K06024 scpB; segregation and condensation protein B D LJP_1181c cell division protein FtsA K03590 ftsA; cell division protein FtsA D LJP_0287 cell division protein K13052 divIC; cell division protein DivIC D LJP_1320c stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D LJP_1187c hypothetical protein K03586 ftsL; cell division protein FtsL D LJP_1182c Cell division protein ftsQ K03589 ftsQ; cell division protein FtsQ D LJP_1159c cell division protein K03588 ftsW; cell division protein FtsW D LJP_1180c cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LJP_1202c septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator D LJP_1176c cell division initiation protein K04074 divIVA; cell division initiation protein D LJP_1179c hypothetical protein K09772 sepF; cell division inhibitor SepF D LJP_1193c rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LJP_1211c MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D LJP_1192c rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D LJP_1191c rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D LJP_1208c bacterial cell division membrane K05837 rodA; rod shape determining protein RodA D LJP_1652c chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D LJP_1651c chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LJP_1653c putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LJP_0989c topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LJP_0990c topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LJP_1791c glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LJP_1654c glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LJP_1054c glucose inhibited division protein A K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D LJP_1053c putative integrase/recombinase K03733 xerC; integrase/recombinase XerC D LJP_1082c integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD D LJP_0642 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D LJP_1144c putative GTP-binding protein K03978 engB; GTP-binding protein D LJP_1284c hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:ljh03400] D LJP_1269c uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D LJP_0095c 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D LJP_0964 putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D LJP_1104c hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D LJP_1423c NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D LJP_0374 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D LJP_0098c methylated DNA-protein cysteine methyltransferase K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D LJP_0716 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D LJP_0515 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D LJP_1392c formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D LJP_1598c exodeoxyribonuclease A K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LJP_0043 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D LJP_0754 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D LJP_1470c NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D LJP_1393c DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D LJP_1008c excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A D LJP_1288c excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D LJP_1289c excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D LJP_1094c excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D LJP_1471c ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LJP_1592c hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D LJP_0297 DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D LJP_0298 DNA-directed RNA polymerase beta chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D LJP_0330 DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D LJP_0227 DNA-directed RNA polymerase delta chain K03048 rpoE; DNA-directed RNA polymerase subunit delta D LJP_0678 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D LJP_0285 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D LJP_0451 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D LJP_0465 mismatch repair ATPase K07456 mutS2; DNA mismatch repair protein MutS2 D LJP_1787 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2 D LJP_0452 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D LJP_0671 exonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D LJP_0672 exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D LJP_1086c DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D LJP_0737 DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D LJP_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D LJP_1152c hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D LJP_0409 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D LJP_1559c DNA polymerase III, alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_1266 DNA-directed DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D LJP_0403 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D LJP_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LJP_1165c exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D LJP_1314c RecA protein K03553 recA; recombination protein RecA D LJP_0453 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D LJP_0454 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D LJP_0679 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D LJP_0375 DNA repair protein RadA-like protein K04485 radA; DNA repair protein RadA/Sms D LJP_0004 recombination protein F K03629 recF; DNA replication and repair protein RecF D LJP_0690 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D LJP_0867 DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O) D LJP_0405 recombination protein RecR K06187 recR; recombination protein RecR D LJP_0675 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D LJP_0966c recombination protein RecU K03700 recU; recombination protein U D LJP_0959 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D LJP_0958 ATP-dependent nuclease, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D LJP_1109c CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D LJP_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D LJP_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D LJP_1055c DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D LJP_1072c DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D LJP_0986c ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D LJP_0457 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D LJP_0717c LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D LJP_1344c hypothetical protein K03565 recX; regulatory protein D LJP_0960 ATP dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D LJP_1519c hypothetical protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D LJP_1613 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D LJP_0458 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:ljh03029] D LJP_0742 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D LJP_1383c translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D LJP_0730 elongation factor Ts K02357 tsf; elongation factor Ts D LJP_1147c elongation factor Tu K02358 tuf; elongation factor Tu D LJP_0302 elongation factor G K02355 fusA; elongation factor G D LJP_0866 GTP-binding protein era protein K03595 era; GTPase D LJP_0181 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LJP_0500 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LJP_0851 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LJP_0506 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LJP_1467c glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D LJP_1466c glutamyl-tRNA(Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D LJP_1468c Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D LJP_0008 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D LJP_0750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D LJP_0749 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D LJP_0448 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LJP_0447 co-chaperonin GroES K04078 groES; chaperonin GroES D LJP_0751 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D LJP_1170c cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1201c cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1793c stage III sporulation protein J precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_1370 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ljh02000] D LJP_0720 ABC transporter ATPase and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_0723 ABC transporter ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_1000c ABC transporter ATPase and permease components K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LJP_0048 putative ABC transporter K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LJP_0552 ABC transporter ATPase and permease components K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_0553 ABC transporter ATPase and permease components K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_1647c ABC transporter ATPase and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_1646c ABC transporter ATPase and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D LJP_0450 ABC transporter ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D LJP_0571 lactacin F ABC transporter permease component K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D LJP_0581 lactacin F ABC transporter permease component K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter D LJP_1746 ABC transporter ATPase and permease components K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D LJP_1745 ABC transporter ATPase and permease components K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D LJP_1044c ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D LJP_0746 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D LJP_1261c ABC transporter solute-binding component K11069 potD; spermidine/putrescine transport system substrate-binding protein D LJP_1262c ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein D LJP_1263c ABC transporter permease component K11071 potB; spermidine/putrescine transport system permease protein D LJP_1264c ABC transporter ATPase component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D LJP_0630 ABC transporter permease component K05845 opuC; osmoprotectant transport system substrate-binding protein D LJP_0629 ABC transporter ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D LJP_0220 multiple sugar ABC transporter ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D LJP_1553c ABC transporter ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D LJP_0221 hypothetical protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D LJP_0222 multiple sugar ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D LJP_0223 multiple sugar ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D LJP_1399 putative ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D LJP_0542 ABC transporter, permease protein K02069 STAR2; UDP-glucose/iron transport system permease protein D LJP_0541 ABC transporter ATPase component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D LJP_1549c ABC-type sugar transport system, periplasmic component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D LJP_1402 periplasmic fructose-binding protein component of signal transduction system LevQ K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D LJP_0434c glycerol-3-phosphate ABC transporter K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D LJP_1552c ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D LJP_1551c ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D LJP_0595 ABC transporter solute-binding component K02040 pstS; phosphate transport system substrate-binding protein D LJP_0596 ABC transporter permease component K02037 pstC; phosphate transport system permease protein D LJP_0597 Phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein D LJP_0598 Phosphate ABC transporter, permease protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LJP_0599 Phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D LJP_1748 hypothetical protein K02044 phnD; phosphonate transport system substrate-binding protein D LJP_0135 putative ABC transporter K02044 phnD; phosphonate transport system substrate-binding protein D LJP_0137 phosphate/phosphonate ABC transporter permease component K02042 phnE; phosphonate transport system permease protein D LJP_0138 phosphate/phosphonate ABC transporter permease component K02042 phnE; phosphonate transport system permease protein D LJP_0136 phosphate/phosphonate ABC transporter ATPase component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D LJP_0554 Glutamine ABC transporter, periplasmic glutamine-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D LJP_0556 glutamine ABC transporter solute-binding component K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein D LJP_0558 glutamine ABC transporter permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LJP_0557 Glutamine transport system permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein D LJP_0555 glutamine ABC transporter ATPase component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1] D LJP_0593 ABC transporter ATPase component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D LJP_0832 putative D-methionine-binding lipoprotein MetQ precursor K02073 metQ; D-methionine transport system substrate-binding protein D LJP_0834 ABC transporter permease component K02072 metI; D-methionine transport system permease protein D LJP_0833 ABC transporter ATPase component K02071 metN; D-methionine transport system ATP-binding protein D LJP_0273 ABC transporter K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D LJP_0274 ABC transporter permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein D LJP_0275 ABC transporter ATPase component K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D LJP_0094c ABC transporter permease component K17073 lysX1; putative lysine transport system substrate-binding protein D LJP_0093c ABC transporter ATPase component K17076 lysY; putative lysine transport system ATP-binding protein D LJP_0880 ABC transporter solute-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LJP_0393 ABC transporter solute-binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D LJP_0877 ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D LJP_0878 ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D LJP_0391 ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D LJP_0392 ABC transporter ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D LJP_0879 ABC transporter ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D LJP_0647c ABC transporter solute-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LJP_1581c Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LJP_0697 oligopeptide ABC transporter solute-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LJP_0698 oligopeptide ABC transporter solute-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D LJP_0695 oligopeptide ABC transporter permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D LJP_0696 oligopeptide ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D LJP_0693 Oligopeptide transport ATP-binding protein oppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D LJP_0694 oligopeptide ABC transporter ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein D LJP_1454 hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component D LJP_1456 ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LJP_0334 ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LJP_0079c ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D LJP_0332 ABC transporter ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LJP_0333 ABC transporter ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LJP_1455 ABC transporter ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LJP_0080c ABC transporter ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D LJP_0081c hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D LJP_1251 ABC metal ion transporter K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D LJP_1628c ABC transporter solute-binding component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D LJP_1626c ABC transporter permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D LJP_1627c ABC transporter ATPase component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D LJP_0248 putative ABC transporter K11051 cylB; multidrug/hemolysin transport system permease protein D LJP_0247 ABC transporter ATPase component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D LJP_1448c major facilitator superfamily permease K20491 nisE; lantibiotic transport system permease protein D LJP_1449c ABC transporter ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein D LJP_1631 Exporter of polyketide antibiotics K25149 narB; polyether ionophore transport system permease protein D LJP_1683 Putative exporter of polyketide antibiotics K25149 narB; polyether ionophore transport system permease protein D LJP_1630 ABC-type multidrug transport system, ATPase component K25150 narA; polyether ionophore transport system ATP-binding protein D LJP_1682 ABC-type multidrug transport system, ATPase component K25150 narA; polyether ionophore transport system ATP-binding protein D LJP_1410c ABC transporter, permease protein K25157 ecsB; ABC-2 type transport system permease protein D LJP_1411c ABC transporter ATPase component K25158 ecsA; ABC-2 type transport system ATP-binding protein D LJP_1640c ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D LJP_0885 ABC transporter ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LJP_1641c ABC transporter ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D LJP_0911 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D LJP_1602c hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D LJP_1669c ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D LJP_1742 ABC transporter permease component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LJP_1603c ABC transporter ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LJP_1668c ABC transporter ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LJP_0910 ABC-type transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D LJP_1019c ABC transporter ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein D LJP_0066c conjugated bile salt transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D LJP_0534c major facilitator superfamily permease K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D LJP_1690 hypothetical protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D LJP_0174c Drug resistance transporter EmrB/QacA subfamily K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D LJP_0430 major facilitator superfamily permease K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D LJP_0022 putative permease K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D LJP_1784 major facilitator superfamily permease K08368 yaaU; MFS transporter, putative metabolite transport protein D LJP_1336c phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D LJP_1337c phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D LJP_1568c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable glucose specific K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D LJP_1597 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, glucose specific K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D LJP_1753c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable beta-glucoside specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D LJP_1694c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, sucrose specific K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D LJP_0562 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable trhalose specific K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D LJP_1666c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable beta-glucosides specific K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D LJP_1571c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIBC, probable arbutin specific K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D LJP_1636c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIABC, probable fructose specific K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D LJP_0195c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable cellobiose specific K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D LJP_0443 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D LJP_0197c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIB, probable cellobiose specific K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D LJP_0622 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_1714c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_0441 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D LJP_0190 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_0198c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable cellobiose specific K02761 celB; cellobiose PTS system EIIC component D LJP_1324c hypothetical protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D LJP_1758c PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D LJP_1757c PTS system galactitol-specific enzyme IIB component K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D LJP_1738 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable galactitol specific K02775 gatC; galactitol PTS system EIIC component D LJP_1756c PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component D LJP_0131 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable galactitol K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204] D LJP_1580c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D LJP_1710c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D LJP_0128 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable mannose specific K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D LJP_1579c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable N-acetylgalactosamine specific K02795 manY; mannose PTS system EIIC component D LJP_1396c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_1709c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_0126 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific K02795 manY; mannose PTS system EIIC component D LJP_0127 phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probable mannose specific K02796 manZ; mannose PTS system EIID component D LJP_1578c phosphoenolpyruvate-dependent sugar phosphotransferase system EIID, probable N-acetylgalactosamine specific K02796 manZ; mannose PTS system EIID component D LJP_1708c phosphoenolpyruvate-dependent sugar phosphotransferase system EIID probable mannose specific K02796 manZ; mannose PTS system EIID component D LJP_1398c phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable mannose specific K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D LJP_0518c glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D LJP_1067c hypothetical protein K10716 kch; voltage-gated potassium channel D LJP_0396 hypothetical protein K10716 kch; voltage-gated potassium channel D LJP_1567 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D LJP_0472c hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D LJP_0040c hypothetical protein K03284 corA; magnesium transporter D LJP_1255c putative CrcB-like protein K06199 crcB; fluoride exporter D LJP_1256c hypothetical protein K06199 crcB; fluoride exporter D LJP_1039 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein D LJP_1340c hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LJP_0617 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LJP_0269 raffinose permease containing phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA domain K16209 lacS; lactose/raffinose/galactose permease D LJP_1295c lactose permease K16209 lacS; lactose/raffinose/galactose permease D LJP_0760 major facilitator superfamily permease K16211 malY; maltose/moltooligosaccharide transporter D LJP_0544c arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D LJP_0529c hypothetical protein K20265 gadC; glutamate:GABA antiporter D LJP_0358c putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter D LJP_0532c hypothetical protein K20265 gadC; glutamate:GABA antiporter D LJP_0057 hypothetical protein K20265 gadC; glutamate:GABA antiporter D LJP_0347 cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D LJP_0176 putative sugar uptake protein K05340 glcU; glucose uptake protein D LJP_0948 ribose transport protein K06216 rbsU; putative ribose uptake protein D LJP_1625c L-lactate permease K03303 lutP; lactate permease D LJP_1450 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family D LJP_0117c Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D LJP_1727 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D LJP_0523c uracil permease K02824 uraA; uracil permease D LJP_0230c xanthine/uracil permease K16169 pbuX; xanthine permease D LJP_1766 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D LJP_1768 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D LJP_1771 Transcriptional regulator, xre family K06901 pbuG; adenine/guanine/hypoxanthine permease D LJP_1788c hypothetical protein K03281 clcA; chloride channel protein, CIC family D LJP_0420c putative chloride channel protein K03281 clcA; chloride channel protein, CIC family D LJP_0037c hypothetical protein K03281 clcA; chloride channel protein, CIC family D LJP_1014c manganese transport protein K03322 mntH; manganese transport protein D LJP_0262 putative permease K13936 mdcF; malonate transporter and related proteins D LJP_0516 hypothetical protein K24180 mleP; malate permease and related proteins D LJP_0156c potassium transport protein K03549 kup; KUP system potassium uptake protein D LJP_0157c putative potassium ion transporter K03549 kup; KUP system potassium uptake protein D LJP_1076c hypothetical protein K23675 fmnP; riboflavin transporter D LJP_1159c cell division protein K03588 ftsW; cell division protein FtsW D LJP_0573 lactacin F transporter protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D LJP_0582 lactacin F transporter auxillary protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter D LJP_1132c putative tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D LJP_1133c Capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator D LJP_1565c nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter C 02044 Secretion system [BR:ljh02044] D LJP_1178c hypothetical protein K02221 yggT; YggT family protein D LJP_1154c putative competence protein K02237 comEA; competence protein ComEA D LJP_0204 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D LJP_1153c competence protein K02238 comEC; competence protein ComEC D LJP_1310c competence protein K02240 comFA; competence protein ComFA D LJP_1309c competence protein K02242 comFC; competence protein ComFC D LJP_1247c hypothetical protein K02243 comGA; competence protein ComGA D LJP_1246c Late competence protein ComGB K02244 comGB; competence protein ComGB D LJP_1245c hypothetical protein K02245 comGC; competence protein ComGC D LJP_1243c hypothetical protein K02248 comGF; competence protein ComGF D LJP_0299c hypothetical protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D LJP_0363 preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LJP_1307c preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D LJP_0387 preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE D LJP_1276c preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D LJP_0324 preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY D LJP_0709 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D LJP_0701 cell division protein K03110 ftsY; fused signal recognition particle receptor D LJP_0455 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D LJP_1793c stage III sporulation protein J precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_1370 putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D LJP_0360 hypothetical protein K12268 asp1; accessory secretory protein Asp1 D LJP_0361 hypothetical protein K12269 asp2; accessory secretory protein Asp2 D LJP_0362 hypothetical protein K12270 asp3; accessory secretory protein Asp3 C 02042 Bacterial toxins [BR:ljh02042] D LJP_1340c hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LJP_0617 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D LJP_1062 hemolysin-like protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:ljh02022] D LJP_0073 two-component system histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D LJP_0072 two-component system response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D LJP_1371c two-component system histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D LJP_1372c two-component regulatory system response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D LJP_1234c two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator D LJP_0579 lactacin F two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0050 Two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0569 Lactacin F two-component system histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D LJP_0051 Two-component response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D LJP_0580 lactacin F two-component system response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D LJP_0570 lactacin F two-component system response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ljh04812] D LJP_1193c rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LJP_1211c MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D LJP_1180c cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LJP_1181c cell division protein FtsA K03590 ftsA; cell division protein FtsA D LJP_1652c chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D LJP_1651c chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LJP_1653c putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ljh04147] D LJP_0920 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_0822 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1277c enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D LJP_1280c glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D LJP_1279c phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D LJP_1084c pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D LJP_0448 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D LJP_0750 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D LJP_1230c glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D LJP_0053c inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D LJP_1147c elongation factor Tu K02358 tuf; elongation factor Tu D LJP_1412 histidine triad HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D LJP_0283c L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_0837 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_1491c L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D LJP_1348c acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D LJP_0325 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D LJP_0755 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D LJP_1293c galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D LJP_1353c glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D LJP_0456 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D LJP_1278c triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D LJP_0169 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D LJP_0351 Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ljh02048] D LJP_1109c CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D LJP_1110c CRISPR-associated protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D LJP_1242c adenine-specific DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D LJP_1436c Type III restriction-modification system restriction subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D LJP_1437c Adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D LJP_1616c hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D LJP_0925c hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D LJP_0926c DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J D LJP_0426 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J D LJP_0170 hypothetical protein K18843 hicB; antitoxin HicB D LJP_1180c cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LJP_1193c rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D LJP_1211c MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D LJP_0989c topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LJP_0990c topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LJP_1170c cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LJP_1201c cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:ljh04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ljh01504] D LJP_0949c Aminoglycoside N3'-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81] D LJP_1424c Aminoglycoside phosphotransferase K00897 aphA; kanamycin kinase [EC:2.7.1.95] D LJP_0033 hypothetical protein K18220 tetM; ribosomal protection tetracycline resistance protein D LJP_0027c N-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D LJP_1044c ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D LJP_0746 ABC transporter ATPase component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D LJP_0430 major facilitator superfamily permease K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D LJP_0022 putative permease K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D LJP_1776 CopAB ATPases metal-fist type repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D LJP_1679c beta-lactamase class A K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LJP_1543c hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6] D LJP_1721c D-alanine--D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D LJP_1720c D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export D LJP_1719c D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D LJP_1718c D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein D LJP_1000c ABC transporter ATPase and permease components K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D LJP_0048 putative ABC transporter K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ljh03100] D LJP_T0055c tRNA-Ala K14218 tRNA-Ala; tRNA Ala D LJP_T0013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LJP_T0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LJP_T0020 tRNA-OTHER K14219 tRNA-Arg; tRNA Arg D LJP_T0047c tRNA-Arg K14219 tRNA-Arg; tRNA Arg D LJP_T0009 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LJP_T0026c tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LJP_T0054c tRNA-Asn K14220 tRNA-Asn; tRNA Asn D LJP_T0034c tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LJP_T0042c tRNA-Asp K14221 tRNA-Asp; tRNA Asp D LJP_T0028c tRNA-Cys K14222 tRNA-Cys; tRNA Cys D LJP_T0022c tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LJP_T0024c tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LJP_T0018c tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LJP_T0029c tRNA-Gln K14223 tRNA-Gln; tRNA Gln D LJP_T0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LJP_T0011 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LJP_T0037c tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LJP_T0019c tRNA-Glu K14224 tRNA-Glu; tRNA Glu D LJP_T0007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LJP_T0049c tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LJP_T0006c tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LJP_T0040c tRNA-Gly K14225 tRNA-Gly; tRNA Gly D LJP_T0030c tRNA-His K14226 tRNA-His; tRNA His D LJP_T0039c tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LJP_T0056c tRNA-Ile K14227 tRNA-Ile; tRNA Ile D LJP_T0051c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T0021c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T00211c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T0027c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T0048c tRNA-Leu K14228 tRNA-Leu; tRNA Leu D LJP_T0003c tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LJP_T0004c tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LJP_T0052c tRNA-Lys K14229 tRNA-Lys; tRNA Lys D LJP_T0044c tRNA-Met K14230 tRNA-Met; tRNA Met D LJP_T0045c tRNA-Met K14230 tRNA-Met; tRNA Met D LJP_T0035c tRNA-Met K14230 tRNA-Met; tRNA Met D LJP_T0043c tRNA-Met K14230 tRNA-Met; tRNA Met D LJP_T0033c tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LJP_T0041c tRNA-Phe K14231 tRNA-Phe; tRNA Phe D LJP_T0046c tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LJP_T0008 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D LJP_T0010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LJP_T0038c tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LJP_T0015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LJP_T0036c tRNA-Ser K14233 tRNA-Ser; tRNA Ser D LJP_T0050c tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0001 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0002 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0025c tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D LJP_T0031c tRNA-Trp K14235 tRNA-Trp; tRNA Trp D LJP_T0023c tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LJP_T0032c tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D LJP_T0012 tRNA-Val K14237 tRNA-Val; tRNA Val D LJP_T0053c tRNA-Val K14237 tRNA-Val; tRNA Val D LJP_R0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0012c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0006c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0009c 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D LJP_R0005c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0008c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0011c 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D LJP_R0007c 5S RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0004c 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D LJP_R0010c 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D LJP_0993c putative reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D LJP_1765c glycolate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2] D LJP_0856 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D LJP_0853 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D LJP_1006 putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D LJP_0493c hypothetical protein K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D LJP_0144 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D LJP_0726c Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D LJP_0969 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D LJP_1546c protease synthase and sporulation negative regulatory protein PAI 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D LJP_0992c galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D LJP_1485c hypothetical protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D LJP_0130c nucleoside 2-deoxyribosyltransferase K08728 E2.4.2.6; nucleoside deoxyribosyltransferase [EC:2.4.2.6] D LJP_1303c prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D LJP_1656c thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D LJP_0151 fructose-1-phosphate kinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234] D LJP_0689 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D LJP_0861c hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D LJP_0467 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LJP_1524c RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LJP_1614c hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LJP_1661c reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LJP_0116 putative maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D LJP_1260c hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D LJP_1304c HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D LJP_0260c Formyl-coenzyme A transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D LJP_0428 putative acyl-CoA transferase/carnitine dehydratase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D LJP_0442 hypothetical protein K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D LJP_1717c putative beta-lactamase K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103] D LJP_1693c hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D LJP_0934 protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LJP_0133c protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LJP_1131c hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LJP_1697c hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LJP_1657c protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D LJP_1379c hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-] D LJP_0011 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D LJP_0208 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D LJP_0209 putative primase K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D LJP_0224 glucan 1,6-alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70] D LJP_1161 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LJP_1773 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D LJP_0563 Phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-] D LJP_1327c myosin-cross-reactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53] D LJP_0504 hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D LJP_0142 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D LJP_0035 cation transporting protein K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D LJP_1198c cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D LJP_1594 cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D LJP_1480c cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D LJP_1430c cation-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D LJP_1004c Mg(2+) transport ATPase, P-type 2 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] D LJP_0840 cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D LJP_1016c NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins D LJP_1516c putative pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D LJP_1061c hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit D LJP_0980 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D LJP_1612 ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction D LJP_0830c hypothetical protein K15051 endA; DNA-entry nuclease D LJP_1556c hypothetical protein K15051 endA; DNA-entry nuclease C 99985 Amino acid metabolism C 99986 Glycan metabolism D LJP_1528c integral membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D LJP_1081c hypothetical protein K02859 ribT; riboflavin biosynthesis RibT protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D LJP_1174c cold shock protein K03704 cspA; cold shock protein D LJP_0772 putative prophage antirepressor K07741 antB; anti-repressor protein D LJP_1335c Arsenate reductase related protein, glutaredoxin family K16509 spxA; regulatory protein spx C 99974 Translation D LJP_0494 hypothetical protein K07570 GSP13; general stress protein 13 D LJP_0288 putative RNA-binding protein K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D LJP_1146c trigger factor K03545 tig; trigger factor D LJP_1274c SsrA-binding protein K03664 smpB; SsrA-binding protein D LJP_1334c hypothetical protein K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D LJP_1194c DNA repair protein RadC K03630 radC; DNA repair protein RadC D LJP_0728 hypothetical protein K07461 K07461; putative endonuclease D LJP_1056c SMF protein K04096 smf; DNA processing protein D LJP_0963 DNA replication protein DnaD K02086 dnaD; DNA replication protein D LJP_0797 phage terminase small subunit K07474 xtmA; phage terminase small subunit D LJP_1205 hypothetical protein K07478 ycaJ; putative ATPase D LJP_0578c transposase K07482 K07482; transposase, IS30 family D LJP_1681c putative transposase K07482 K07482; transposase, IS30 family D LJP_1686c Transposase K07482 K07482; transposase, IS30 family D LJP_0039c transposase K07482 K07482; transposase, IS30 family D LJP_0497 hypothetical protein K07483 K07483; transposase D LJP_0843 transposase K07483 K07483; transposase D LJP_0368 Insertion element IS1223 K07483 K07483; transposase D LJP_0258c hypothetical protein K07483 K07483; transposase D LJP_0706c truncated transposase K07483 K07483; transposase D LJP_0475 hypothetical protein K07484 K07484; transposase D LJP_0481c Degenerate transposase K07484 K07484; transposase D LJP_0355 Degenerate transposase K07484 K07484; transposase D LJP_0357 transposase K07484 K07484; transposase D LJP_0476 hypothetical protein K07484 K07484; transposase D LJP_0480c transposase K07484 K07484; transposase D LJP_0824c transposase K07484 K07484; transposase D LJP_0826c truncated transposase K07484 K07484; transposase D LJP_1118 truncated transposase K07484 K07484; transposase D LJP_0479 transposase K07485 K07485; transposase D LJP_1003 transposase K07485 K07485; transposase D LJP_1510 transposase K07485 K07485; transposase D LJP_0026 transposase K07485 K07485; transposase D LJP_0036c transposase K07485 K07485; transposase D LJP_0431 transposase K07486 K07486; transposase D LJP_0538 putative transposase K07486 K07486; transposase D LJP_0572c Transposase K07486 K07486; transposase D LJP_0650c Transposase K07486 K07486; transposase D LJP_0722 transposase K07486 K07486; transposase D LJP_0725 hypothetical protein K07486 K07486; transposase D LJP_0951c hypothetical protein K07486 K07486; transposase D LJP_1452 transposase K07486 K07486; transposase D LJP_1300 hypothetical protein K07486 K07486; transposase D LJP_0437 transposase K07491 rayT; REP-associated tyrosine transposase D LJP_1451 putative transposase K07496 K07496; putative transposase D LJP_1046c transposase K07496 K07496; putative transposase D LJP_1555c Transposase K07496 K07496; putative transposase D LJP_0436c transposase K07496 K07496; putative transposase D LJP_0348 putative transposase K07496 K07496; putative transposase D LJP_0498 hypothetical protein K07497 K07497; putative transposase D LJP_0844 IS3-family transposase K07497 K07497; putative transposase D LJP_0370 transposase K07497 K07497; putative transposase D LJP_0256c IS1223 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D LJP_0404 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D LJP_1705c amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D LJP_1706c hypothetical protein K03293 TC.AAT; amino acid transporter, AAT family D LJP_1526 hypothetical protein K03293 TC.AAT; amino acid transporter, AAT family D LJP_0110 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D LJP_0619c amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LJP_1700 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LJP_1711c amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LJP_0017c amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D LJP_0547 dipeptide/tripeptide permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D LJP_0060 branched-chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D LJP_1030c branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family C 99978 Cell growth D LJP_1442 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase D LJP_1443 Site-specific recombinase, DNA invertase Pin related protein K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D LJP_1160c GTP-binding protein typA/bipA-like protein K06207 typA; GTP-binding protein D LJP_0864 PHOH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D LJP_0162 muramidase K07273 acm; lysozyme C 99994 Others D LJP_0600 phosphate uptake regulator K02039 phoU; phosphate transport system protein D LJP_1235c hypothetical protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D LJP_1333c hypothetical protein K06198 coiA; competence protein CoiA D LJP_1406c phenylalanyl-tRNA synthetase beta chain K06878 K06878; tRNA-binding protein D LJP_1541c hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily D LJP_0031 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D LJP_1037c putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D LJP_1015c putative ABC transporter K09014 sufB; Fe-S cluster assembly protein SufB D LJP_1018c hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D LJP_1048c putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D LJP_0627 ribonuclease K07058 K07058; membrane protein D LJP_0084c membrane LemA-like protein K03744 lemA; LemA protein D LJP_1474c hypothetical protein K03095 sprL; SprT-like protein D LJP_0492c hypothetical protein K03975 dedA; membrane-associated protein D LJP_1548 hypothetical protein K08987 K08987; putative membrane protein D LJP_1739 hypothetical protein K08996 yagU; putative membrane protein D LJP_1497 phosphate starvation protein K13256 psiE; protein PsiE C 99997 Function unknown D LJP_0225c HD domain-containing protein K06885 K06885; uncharacterized protein D LJP_0936 cinnamoyl esterase K06889 K06889; uncharacterized protein D LJP_1349c hypothetical protein K06889 K06889; uncharacterized protein D LJP_1673 alpha/beta superfamily hydrolase K06889 K06889; uncharacterized protein D LJP_1457 integral membrane protein K06890 K06890; uncharacterized protein D LJP_0994c integral membrane protein K06890 K06890; uncharacterized protein D LJP_0183 hypothetical protein K06950 K06950; uncharacterized protein D LJP_1574 hypothetical protein K06956 K06956; uncharacterized protein D LJP_0102c hypothetical protein K06973 K06973; uncharacterized protein D LJP_0648 hypothetical protein K07006 K07006; uncharacterized protein D LJP_0996c hypothetical protein K07045 K07045; uncharacterized protein D LJP_1754 hypothetical protein K07090 K07090; uncharacterized protein D LJP_0029 putative NADH-flavin reductase K07118 K07118; uncharacterized protein D LJP_1769 Short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein D LJP_1090c hypothetical protein K07124 K07124; uncharacterized protein D LJP_1210c hypothetical protein K08998 K08998; uncharacterized protein D LJP_0863 30S ribosomal protein S21 K09117 K09117; uncharacterized protein D LJP_0146 hypothetical protein K09155 K09155; uncharacterized protein D LJP_1326 hypothetical protein K09384 K09384; uncharacterized protein D LJP_1070c hypothetical protein K09384 K09384; uncharacterized protein D LJP_0708 hypothetical protein K09787 K09787; uncharacterized protein D LJP_1083c hypothetical protein K00243 K00243; uncharacterized protein D LJP_1674c hypothetical protein K09861 K09861; uncharacterized protein D LJP_1751c hypothetical protein K09963 K09963; uncharacterized protein D LJP_1658c hypothetical protein K09963 K09963; uncharacterized protein D LJP_0719 hypothetical protein K09976 K09976; uncharacterized protein D LJP_0800 hypothetical protein K07584 ysxB; uncharacterized protein D LJP_1343c hypothetical protein K07586 ygaC; uncharacterized protein D LJP_0740 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024