+D GENES KO
#
KEGG Orthology (KO) - Apilactobacillus kunkeei
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lku00010]
D APS55_06375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D APS55_02125 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D APS55_00740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D APS55_00750 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APS55_00745 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D APS55_01470 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_01060 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_00735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APS55_06135 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D APS55_07055 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_01245 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_03090 hypothetical protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D APS55_04670 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D APS55_03985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle)
D APS55_03680 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
C 00030 Pentose phosphate pathway [PATH:lku00030]
D APS55_02125 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D APS55_02325 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D APS55_04385 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D APS55_02330 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D APS55_06525 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D APS55_01050 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D APS55_01910 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D APS55_01565 hypothetical protein K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D APS55_03985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D APS55_05600 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D APS55_01325 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D APS55_00615 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D APS55_05130 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
C 00040 Pentose and glucuronate interconversions [PATH:lku00040]
D APS55_00790 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APS55_06525 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D APS55_02990 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:lku00051]
D APS55_02995 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D APS55_02120 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D APS55_02130 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D APS55_02990 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D APS55_00740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:lku00052]
D APS55_04060 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D APS55_00790 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APS55_03985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D APS55_06375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D APS55_02115 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:lku00500]
D APS55_02115 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D APS55_00790 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APS55_02450 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D APS55_02455 hypothetical protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D APS55_03985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D APS55_06375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D APS55_02125 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D APS55_02995 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D APS55_02120 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D APS55_02130 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lku00520]
D APS55_05785 hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D APS55_02995 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D APS55_02120 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D APS55_02130 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D APS55_00655 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D APS55_00660 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D APS55_01330 glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D APS55_07625 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_00050 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_01290 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_00685 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D APS55_05210 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D APS55_06375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D APS55_03985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D APS55_00790 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APS55_04060 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D APS55_02125 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:lku00620]
D APS55_03090 hypothetical protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D APS55_04670 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D APS55_07275 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D APS55_00705 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APS55_06135 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D APS55_04035 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D APS55_04015 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D APS55_04025 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D APS55_04030 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D APS55_06290 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D APS55_07055 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_01245 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_02660 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D APS55_05830 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D APS55_02985 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D APS55_03680 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D APS55_03150 NAD-dependent malic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D APS55_04305 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lku00630]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_03355 catalase K03781 katE; catalase [EC:1.11.1.6]
D APS55_06405 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APS55_00105 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APS55_01960 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism [PATH:lku00640]
D APS55_07275 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D APS55_00705 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APS55_04035 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D APS55_04015 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D APS55_04025 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D APS55_04030 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D APS55_07055 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_01245 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:lku00650]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_03090 hypothetical protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D APS55_05790 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D APS55_03505 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APS55_03595 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D APS55_02470 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:lku00660]
D APS55_03505 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APS55_03595 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00562 Inositol phosphate metabolism [PATH:lku00562]
D APS55_05650 fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D APS55_00740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lku00190]
D APS55_00075 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D APS55_07640 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D APS55_00065 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D APS55_07645 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D APS55_00070 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D APS55_00080 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D APS55_07635 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D APS55_00060 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D APS55_00095 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D APS55_00085 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D APS55_00090 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D APS55_06835 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D APS55_01405 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lku00710]
D APS55_00745 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D APS55_00750 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APS55_01050 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D APS55_00740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D APS55_06525 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D APS55_04305 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:lku00720]
D APS55_04305 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D APS55_03680 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_04035 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D APS55_04015 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D APS55_04025 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D APS55_04030 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D APS55_06740 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D APS55_06450 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D APS55_03145 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D APS55_03980 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D APS55_02855 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D APS55_00705 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APS55_07275 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:lku00680]
D APS55_00105 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APS55_01960 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APS55_00735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APS55_04305 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D APS55_07275 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D APS55_00705 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APS55_01470 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_01060 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_04210 hypothetical protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:lku00910]
D APS55_06405 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APS55_04690 carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:lku00920]
D APS55_07395 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D APS55_02865 hypothetical protein K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lku00061]
D APS55_04035 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D APS55_04015 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D APS55_04025 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D APS55_04030 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D APS55_04000 acyl carrier protein K02078 acpP; acyl carrier protein
D APS55_06560 acyl carrier protein K02078 acpP; acyl carrier protein
D APS55_04005 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D APS55_03995 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D APS55_04055 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D APS55_04010 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APS55_04020 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APS55_04050 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APS55_04040 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lku00071]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_03090 hypothetical protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D APS55_04670 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lku00561]
D APS55_06640 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D APS55_06555 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D APS55_06855 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D APS55_05815 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D APS55_05085 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D APS55_05260 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D APS55_01830 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D APS55_05275 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:lku00564]
D APS55_00795 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D APS55_06855 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D APS55_05815 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D APS55_05235 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D APS55_05085 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D APS55_03285 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D APS55_05865 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D APS55_07445 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D APS55_02905 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:lku00600]
D APS55_05785 hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lku00230]
D APS55_05555 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D APS55_01565 hypothetical protein K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D APS55_03985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D APS55_05600 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D APS55_01325 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D APS55_03440 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D APS55_03460 hypothetical protein K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D APS55_03450 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D APS55_03435 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D APS55_03425 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D APS55_03430 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D APS55_03445 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D APS55_03415 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D APS55_03410 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D APS55_03420 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D APS55_01735 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D APS55_03455 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D APS55_05770 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D APS55_01205 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D APS55_01520 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D APS55_07335 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D APS55_05050 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D APS55_04650 GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D APS55_01745 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D APS55_04590 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D APS55_06480 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D APS55_00955 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D APS55_00960 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D APS55_02605 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D APS55_05980 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D APS55_01390 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D APS55_05450 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D APS55_01740 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D APS55_02500 adenosine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D APS55_01865 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D APS55_07425 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D APS55_04970 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:lku00240]
D APS55_02370 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_06765 carbamoyl phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_01760 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_02365 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_06760 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_01765 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_01775 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D APS55_01770 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D APS55_01755 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D APS55_02910 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D APS55_02915 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D APS55_05845 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D APS55_01295 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D APS55_06190 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D APS55_06325 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D APS55_00100 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D APS55_06755 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D APS55_01865 2', 3'-cyclic nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D APS55_07425 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D APS55_02605 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D APS55_00955 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D APS55_00960 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D APS55_05690 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D APS55_00915 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D APS55_01045 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D APS55_00125 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D APS55_06230 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lku00250]
D APS55_07065 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D APS55_04430 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D APS55_07080 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D APS55_02640 hypothetical protein K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D APS55_02825 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D APS55_02830 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D APS55_01740 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D APS55_01735 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D APS55_01775 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D APS55_06405 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APS55_02370 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_06765 carbamoyl phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_01760 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_02365 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_06760 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_01765 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_03430 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D APS55_00655 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D APS55_03440 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lku00260]
D APS55_04325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APS55_04360 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D APS55_03335 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APS55_02880 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APS55_03325 hypothetical protein K00872 thrB; homoserine kinase [EC:2.7.1.39]
D APS55_01090 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D APS55_03330 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D APS55_00105 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APS55_01960 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APS55_01470 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_01060 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_04210 hypothetical protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00270 Cysteine and methionine metabolism [PATH:lku00270]
D APS55_02875 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D APS55_04375 hypothetical protein K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D APS55_02860 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D APS55_07145 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D APS55_05565 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D APS55_07535 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D APS55_04325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APS55_04360 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D APS55_03335 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APS55_02880 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APS55_02865 hypothetical protein K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D APS55_02870 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D APS55_07055 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_01245 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_04210 hypothetical protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:lku00280]
D APS55_04535 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_05790 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lku00290]
D APS55_03505 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00300 Lysine biosynthesis [PATH:lku00300]
D APS55_03335 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APS55_02880 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APS55_04325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APS55_04360 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D APS55_04345 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D APS55_04350 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D APS55_02345 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D APS55_04285 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D APS55_04320 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D APS55_04330 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D APS55_04335 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D APS55_04300 hypothetical protein K00841 patA; aminotransferase [EC:2.6.1.-]
D APS55_04355 hypothetical protein K00841 patA; aminotransferase [EC:2.6.1.-]
D APS55_02665 hypothetical protein K00841 patA; aminotransferase [EC:2.6.1.-]
D APS55_04340 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D APS55_00630 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D APS55_07075 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D APS55_01275 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:lku00220]
D APS55_02340 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D APS55_02825 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D APS55_02830 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D APS55_03430 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D APS55_06405 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APS55_02370 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_06765 carbamoyl phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_01760 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APS55_02365 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_06760 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_01765 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APS55_02355 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D APS55_02350 hypothetical protein K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D APS55_02360 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D APS55_02345 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:lku00330]
D APS55_01130 hypothetical protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D APS55_04660 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D APS55_04655 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D APS55_04575 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism [PATH:lku00350]
D APS55_03090 hypothetical protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D APS55_04670 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D APS55_03830 2-keto-4-pentenoate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism [PATH:lku00380]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_03355 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lku00400]
D APS55_03320 hypothetical protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D APS55_02230 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:lku00430]
D APS55_00705 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APS55_07275 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lku00450]
D APS55_02875 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D APS55_02860 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D APS55_02625 hypothetical protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D APS55_00785 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D APS55_01365 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lku00460]
D APS55_04430 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D APS55_00105 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APS55_01960 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lku00470]
D APS55_01265 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D APS55_07575 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D APS55_03430 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D APS55_07340 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3]
D APS55_05505 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D APS55_07065 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D APS55_04320 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D APS55_04330 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:lku00480]
D APS55_03400 peptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D APS55_02475 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D APS55_02480 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D APS55_02330 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D APS55_02325 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D APS55_06785 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:lku00511]
D APS55_05785 hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:lku00542]
D APS55_00850 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lku00541]
D APS55_00790 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APS55_04060 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D APS55_01330 glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D APS55_05210 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lku00550]
D APS55_07625 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_00050 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_01290 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_00685 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D APS55_06975 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D APS55_05505 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D APS55_07075 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D APS55_07575 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D APS55_01275 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D APS55_06070 UDP kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D APS55_05860 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D APS55_05500 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D APS55_05510 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D APS55_06700 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D APS55_07035 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D APS55_05495 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D APS55_06350 penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D APS55_03405 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_04485 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_01505 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_00130 UDP-N-acetylmuramyl peptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D APS55_00135 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:lku00552]
D APS55_00850 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D APS55_01120 acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D APS55_06025 glycosyl transferase K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D APS55_05955 hypothetical protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D APS55_06035 CDP-glycerol glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D APS55_01670 glycosyl transferase family 1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D APS55_01675 hypothetical protein K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D APS55_01070 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D APS55_03760 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D APS55_01830 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D APS55_05275 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D APS55_05260 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D APS55_05265 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lku00543]
D APS55_00850 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D APS55_01455 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lku00730]
D APS55_02430 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D APS55_04190 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D APS55_07525 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_05570 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_07520 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D APS55_02440 hypothetical protein K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D APS55_02435 hypothetical protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D APS55_06520 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D APS55_06530 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D APS55_04970 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D APS55_02425 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:lku00740]
D APS55_06645 HAD family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D APS55_05920 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D APS55_02440 hypothetical protein K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D APS55_05555 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism
D APS55_03330 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lku00760]
D APS55_01115 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D APS55_06900 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D APS55_01110 NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D APS55_07440 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D APS55_01375 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D APS55_05455 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:lku00770]
D APS55_03505 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APS55_06795 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D APS55_04645 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D APS55_06490 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D APS55_05675 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D APS55_06955 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D APS55_04045 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
C 00780 Biotin metabolism [PATH:lku00780]
D APS55_04055 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D APS55_04010 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APS55_04020 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APS55_04050 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APS55_04040 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D APS55_02005 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:lku00790]
D APS55_06235 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D APS55_07505 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:lku00670]
D APS55_06235 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D APS55_06740 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D APS55_06450 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D APS55_00105 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APS55_01960 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APS55_03450 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D APS55_03455 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D APS55_06500 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D APS55_06230 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D APS55_03145 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D APS55_03980 hypothetical protein K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D APS55_02855 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D APS55_06360 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lku00130]
D APS55_03485 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lku00900]
D APS55_01340 ipk; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_05790 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D APS55_01385 3-hydroxy-3-methylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D APS55_06680 hypothetical protein K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D APS55_06670 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D APS55_06675 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D APS55_06665 hypothetical protein K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D APS55_06465 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D APS55_05860 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:lku01054]
D APS55_07065 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:lku00332]
D APS55_04660 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D APS55_04655 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:lku00261]
D APS55_04325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APS55_04360 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D APS55_04345 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D APS55_04350 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lku00521]
D APS55_06375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D APS55_03985 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D APS55_05650 fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D APS55_06375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
D APS55_02230 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D APS55_04005 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D APS55_04010 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APS55_04040 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D APS55_04000 acyl carrier protein K02078 acpP; acyl carrier protein
D APS55_06560 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D APS55_07145 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lku00362]
D APS55_06635 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D APS55_01985 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D APS55_06290 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:lku00625]
D APS55_04670 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D APS55_03090 hypothetical protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D APS55_06635 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D APS55_06635 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:lku00626]
D APS55_04670 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D APS55_03090 hypothetical protein K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lku03020]
D APS55_04830 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D APS55_04835 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D APS55_04995 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D APS55_06485 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D APS55_01300 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
D APS55_04390 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lku03010]
D APS55_06195 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D APS55_05835 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D APS55_04895 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D APS55_07540 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D APS55_04950 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D APS55_02710 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D APS55_04850 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D APS55_04935 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D APS55_05030 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D APS55_04860 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D APS55_04990 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D APS55_04845 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D APS55_04985 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D APS55_04930 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D APS55_05710 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D APS55_06605 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D APS55_04910 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D APS55_02700 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D APS55_04885 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D APS55_05705 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D APS55_06050 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D APS55_00980 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D APS55_04880 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D APS55_04865 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D APS55_04870 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D APS55_04925 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D APS55_04940 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D APS55_00970 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D APS55_02690 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D APS55_00975 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D APS55_00985 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D APS55_05025 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D APS55_04915 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D APS55_04960 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D APS55_04900 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D APS55_05000 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D APS55_04945 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D APS55_06625 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D APS55_06920 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D APS55_06420 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D APS55_04890 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D APS55_04875 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D APS55_04920 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D APS55_06430 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D APS55_06535 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D APS55_04905 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D APS55_04955 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D APS55_01285 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D APS55_06870 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D APS55_06355 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D APS55_01000 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D APS55_02760 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D APS55_06925 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D APS55_04980 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D APS55_01180 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_07220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_05280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_01430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_02390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_01165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_01425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_02385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_05295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_07215 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_07210 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_01420 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_05300 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_02380 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_01160 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lku00970]
D APS55_01170 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APS55_05290 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APS55_04810 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_05330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_05145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_06415 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_00755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_01155 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_07205 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_03225 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_03230 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_03235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_05360 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APS55_07185 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APS55_05395 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APS55_07155 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D APS55_01075 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_01135 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_00355 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_00505 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_07160 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_05385 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APS55_05400 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APS55_07195 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APS55_00510 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APS55_07045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APS55_04800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APS55_05320 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APS55_05370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APS55_01080 tRNA-His K14226 tRNA-His; tRNA His
D APS55_07165 tRNA-His K14226 tRNA-His; tRNA His
D APS55_01175 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APS55_05375 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APS55_05285 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APS55_07150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_04805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_05325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_01085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_04790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_02555 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APS55_05310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APS55_04785 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APS55_05355 tRNA-Met K14230 tRNA-Met; tRNA Met
D APS55_05345 tRNA-Met K14230 tRNA-Met; tRNA Met
D APS55_05340 tRNA-Met K14230 tRNA-Met; tRNA Met
D APS55_05390 tRNA-Met K14230 tRNA-Met; tRNA Met
D APS55_05365 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D APS55_07180 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D APS55_04815 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D APS55_05335 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D APS55_07200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_05350 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_05405 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_05380 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_05775 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_00345 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_01150 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_01415 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_04795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_05315 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_07170 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D APS55_01140 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D APS55_07175 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D APS55_04780 tRNA-Val K14237 tRNA-Val; tRNA Val
D APS55_05305 tRNA-Val K14237 tRNA-Val; tRNA Val
D APS55_07190 tRNA-Val K14237 tRNA-Val; tRNA Val
D APS55_01030 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D APS55_05075 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D APS55_05080 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D APS55_05070 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D APS55_07385 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D APS55_06005 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D APS55_00570 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D APS55_06085 glyQ; glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D APS55_06090 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D APS55_06935 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D APS55_04775 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D APS55_01025 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D APS55_01365 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D APS55_06500 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D APS55_07510 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D APS55_07130 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D APS55_05545 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D APS55_01185 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D APS55_07040 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D APS55_05875 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D APS55_06000 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APS55_06310 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D APS55_06315 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D APS55_01435 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D APS55_01395 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lku03060]
D APS55_04965 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D APS55_00995 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D APS55_00725 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D APS55_07400 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D APS55_02770 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APS55_06285 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APS55_00830 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D APS55_06585 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D APS55_06575 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D APS55_02795 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D APS55_06745 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lku04122]
D APS55_07525 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_05570 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_05580 tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D APS55_07520 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lku03018]
D APS55_00735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APS55_00720 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D APS55_01270 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D APS55_06180 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D APS55_07430 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D APS55_01870 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D APS55_05620 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D APS55_05715 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D APS55_05935 dnaK; Fe-S protein assembly chaperone HscA K04043 dnaK; molecular chaperone DnaK
D APS55_00855 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APS55_01405 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lku03030]
D APS55_00690 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APS55_06130 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APS55_05880 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D APS55_00935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APS55_00905 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APS55_05700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APS55_02750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APS55_02685 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D APS55_06095 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D APS55_02705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_00410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_03010 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APS55_06730 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APS55_06260 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D APS55_06965 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D APS55_05060 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lku03410]
D APS55_00710 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D APS55_06960 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D APS55_07570 hypothetical protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D APS55_06040 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D APS55_06965 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D APS55_05765 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D APS55_05060 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lku03420]
D APS55_01235 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D APS55_00775 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A
D APS55_00780 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D APS55_05750 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D APS55_04640 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_05055 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_01400 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_06965 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D APS55_05060 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D APS55_04390 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:lku03430]
D APS55_07420 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D APS55_07355 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D APS55_07415 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D APS55_04640 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_05055 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_01400 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_06455 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D APS55_06460 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D APS55_05765 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D APS55_02705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_00410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_06130 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APS55_05880 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D APS55_02750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APS55_00935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APS55_05700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APS55_00905 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APS55_00690 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APS55_05060 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lku03440]
D APS55_05765 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D APS55_02705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_00410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_02735 recombinase RecF K03629 recF; DNA replication and repair protein RecF
D APS55_06080 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D APS55_00925 recombination protein RecR K06187 recR; recombination protein RecR
D APS55_07435 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D APS55_06965 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D APS55_07410 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D APS55_07405 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D APS55_06550 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D APS55_05595 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D APS55_06130 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APS55_05880 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D APS55_02750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APS55_00935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APS55_05700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APS55_00905 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APS55_00690 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APS55_06495 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lku02010]
D APS55_04235 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D APS55_04240 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D APS55_04245 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D APS55_05150 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APS55_05155 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APS55_05160 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D APS55_05165 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D APS55_05170 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D APS55_05175 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D APS55_03125 glutamine ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D APS55_03120 peptide ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D APS55_03180 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D APS55_03190 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D APS55_03185 arginine ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D APS55_02835 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D APS55_02840 glnQ; glutamine ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D APS55_07595 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D APS55_04270 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D APS55_00020 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D APS55_07600 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D APS55_00025 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D APS55_04280 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D APS55_07605 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D APS55_00030 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D APS55_04275 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D APS55_03825 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_03630 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_03635 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_02670 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_04610 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_04615 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D APS55_04620 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D APS55_04625 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D APS55_04630 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D APS55_01975 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D APS55_04470 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D APS55_05015 cobalt ABC transporter ATP-binding protein K16785 ecfT; energy-coupling factor transport system permease protein
D APS55_05005 cbiO; energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D APS55_05010 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D APS55_03650 hypothetical protein K11051 cylB; multidrug/hemolysin transport system permease protein
D APS55_03645 hypothetical protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D APS55_06030 Teichoic acid translocation permease TagG K09692 tagG; teichoic acid transport system permease protein
D APS55_04445 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D APS55_04450 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D APS55_04440 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D APS55_00150 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D APS55_00145 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:lku02060]
D APS55_05255 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:lku03070]
D APS55_00995 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D APS55_00725 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D APS55_04965 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D APS55_07400 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D APS55_02770 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APS55_06285 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APS55_00830 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D APS55_06575 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D APS55_06585 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lku02020]
D APS55_05185 hypothetical protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D APS55_05150 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APS55_05155 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APS55_02525 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D APS55_02545 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D APS55_02550 PhoP family transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D APS55_02755 chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D APS55_00965 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D APS55_02270 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D APS55_02275 two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D APS55_06860 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D APS55_06865 PhoB family transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D APS55_04440 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D APS55_04445 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D APS55_04450 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D APS55_06405 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_05210 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lku02024]
D APS55_02925 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D APS55_02270 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D APS55_02275 two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D APS55_03825 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_03630 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_03635 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_02670 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_04610 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_04615 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D APS55_04620 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D APS55_04625 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D APS55_04630 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D APS55_04165 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D APS55_04155 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D APS55_04160 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D APS55_04145 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D APS55_02770 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APS55_06285 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APS55_00995 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D APS55_00725 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D APS55_04965 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D APS55_07400 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D APS55_00830 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D APS55_06575 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D APS55_06585 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D APS55_04440 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D APS55_04445 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D APS55_04450 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lku02040]
D APS55_03180 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D APS55_06100 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D APS55_00735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lku01501]
D APS55_03825 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_03630 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_03635 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_02670 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_04610 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_04615 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D APS55_04620 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D APS55_04625 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D APS55_04630 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D APS55_06700 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D APS55_07035 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:lku01502]
D APS55_07575 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D APS55_01265 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D APS55_01275 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D APS55_05500 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D APS55_05510 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lku01503]
D APS55_02950 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D APS55_02525 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D APS55_00965 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lku01000]
C 01001 Protein kinases [BR:lku01001]
D APS55_06515 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D APS55_03770 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D APS55_02545 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D APS55_02270 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D APS55_06860 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lku01009]
D APS55_06510 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lku01002]
D APS55_06745 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D APS55_01055 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D APS55_02815 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D APS55_02820 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D APS55_04650 GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D APS55_03625 hypothetical protein K07010 K07010; putative glutamine amidotransferase
D APS55_03440 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D APS55_00655 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D APS55_07080 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D APS55_03570 general stress protein K05520 yhbO; deglycase [EC:3.5.1.124]
D APS55_01750 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D APS55_06630 peptidase U34 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D APS55_03845 hypothetical protein K07052 K07052; CAAX protease family protein
D APS55_03675 hypothetical protein K07052 K07052; CAAX protease family protein
D APS55_02570 hypothetical protein K07052 K07052; CAAX protease family protein
D APS55_02240 hypothetical protein K07052 K07052; CAAX protease family protein
D APS55_03665 hypothetical protein K07052 K07052; CAAX protease family protein
D APS55_03670 hypothetical protein K07052 K07052; CAAX protease family protein
D APS55_03400 peptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D APS55_05440 oligopeptidase PepB K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D APS55_04230 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D APS55_07110 dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D APS55_04285 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D APS55_06115 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D APS55_04340 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D APS55_04215 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D APS55_01200 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D APS55_05870 metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D APS55_02525 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D APS55_03405 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_04485 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_01505 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_00760 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D APS55_04580 hypothetical protein K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D APS55_05680 peptidase K07177 K07177; Lon-like protease
D APS55_00465 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D APS55_05800 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D APS55_02795 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89]
D APS55_04575 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D APS55_07095 hypothetical protein K08677 kscP; kumamolisin [EC:3.4.21.123]
D APS55_06365 hypothetical protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
C 01003 Glycosyltransferases [BR:lku01003]
D APS55_05260 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D APS55_05265 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D APS55_06700 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D APS55_07035 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D APS55_01120 acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D APS55_01670 glycosyl transferase family 1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D APS55_01675 hypothetical protein K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D APS55_00850 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D APS55_01455 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D APS55_03790 hypothetical protein K19423 epsE; glycosyltransferase EpsE [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lku01005]
D APS55_02290 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D APS55_00850 UDP-phosphate N-acetyl-glucosaminyl transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D APS55_05205 glucosyl transferase family 2 K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lku01011]
D APS55_07625 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_00050 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_01290 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APS55_00685 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D APS55_06975 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D APS55_05505 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D APS55_07075 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D APS55_07575 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D APS55_01265 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D APS55_07340 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3]
D APS55_05500 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D APS55_05510 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D APS55_06700 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D APS55_07035 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D APS55_05495 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D APS55_06350 penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D APS55_03405 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_04485 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_01505 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D APS55_01750 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D APS55_06320 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D APS55_02950 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:lku01004]
D APS55_04005 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D APS55_03995 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D APS55_04055 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D APS55_04010 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APS55_04020 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APS55_04050 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APS55_04040 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D APS55_06555 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D APS55_06855 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D APS55_05815 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lku01008]
D APS55_07065 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:lku01006]
D APS55_06465 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D APS55_05860 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D APS55_06395 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:lku01007]
D APS55_01030 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D APS55_01435 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D APS55_01395 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D APS55_01025 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D APS55_07040 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D APS55_01365 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D APS55_05545 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D APS55_07510 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D APS55_07130 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D APS55_01185 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D APS55_06005 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D APS55_00570 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D APS55_06000 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APS55_06085 glyQ; glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D APS55_06090 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D APS55_04775 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D APS55_05875 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D APS55_06935 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D APS55_07385 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D APS55_06310 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D APS55_06315 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D APS55_04300 hypothetical protein K00841 patA; aminotransferase [EC:2.6.1.-]
D APS55_04355 hypothetical protein K00841 patA; aminotransferase [EC:2.6.1.-]
D APS55_02665 hypothetical protein K00841 patA; aminotransferase [EC:2.6.1.-]
D APS55_02345 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lku00194]
D APS55_07635 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D APS55_00060 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D APS55_07640 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D APS55_00065 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D APS55_07645 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D APS55_00070 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D APS55_00075 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D APS55_00080 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D APS55_00085 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D APS55_00090 ATP synthase F0F1 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D APS55_00095 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lku03000]
D APS55_07320 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D APS55_01915 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D APS55_01125 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D APS55_03885 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D APS55_06400 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D APS55_02015 transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D APS55_02150 hypothetical protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D APS55_04365 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D APS55_01920 ArsR family transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D APS55_02110 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D APS55_04725 Cro/Cl family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D APS55_02005 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D APS55_01335 transcriptional regulator K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D APS55_00865 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D APS55_03370 hypothetical protein K07729 K07729; putative transcriptional regulator
D APS55_00460 hypothetical protein K07729 K07729; putative transcriptional regulator
D APS55_03055 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D APS55_01540 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D APS55_05925 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D APS55_02425 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D APS55_04820 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D APS55_00815 hypothetical protein K03973 pspC; phage shock protein C
D APS55_06755 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D APS55_06950 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D APS55_05480 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lku03021]
D APS55_04390 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D APS55_04995 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D APS55_04830 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D APS55_04835 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D APS55_01300 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D APS55_06485 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D APS55_06100 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
D APS55_01005 hypothetical protein K27000 sigH; RNA polymerase sigma-H factor
D APS55_05890 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D APS55_06445 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D APS55_00990 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D APS55_06330 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:lku03019]
D APS55_06565 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D APS55_05620 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D APS55_05715 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D APS55_07430 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D APS55_01870 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D APS55_00720 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D APS55_01270 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D APS55_07390 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D APS55_06180 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D APS55_00735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APS55_05935 dnaK; Fe-S protein assembly chaperone HscA K04043 dnaK; molecular chaperone DnaK
D APS55_00855 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APS55_01405 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 03041 Spliceosome
C 03011 Ribosome [BR:lku03011]
D APS55_06195 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D APS55_05835 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D APS55_04895 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D APS55_07540 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D APS55_04950 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D APS55_02710 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D APS55_04850 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D APS55_04935 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D APS55_05030 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D APS55_04860 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D APS55_04990 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D APS55_04845 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D APS55_04985 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D APS55_04930 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D APS55_05710 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D APS55_06605 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D APS55_04910 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D APS55_02700 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D APS55_04885 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D APS55_05705 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D APS55_06050 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D APS55_00980 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D APS55_04880 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D APS55_04865 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D APS55_04870 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D APS55_04925 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D APS55_04940 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D APS55_02690 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D APS55_00975 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D APS55_00985 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D APS55_00970 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D APS55_05025 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D APS55_04915 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D APS55_04960 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D APS55_04900 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D APS55_05000 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D APS55_04945 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D APS55_06625 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D APS55_06920 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D APS55_06420 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D APS55_04890 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D APS55_04875 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D APS55_04920 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D APS55_06430 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D APS55_06535 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D APS55_04905 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D APS55_04955 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D APS55_01285 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D APS55_06870 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D APS55_06355 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D APS55_01000 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D APS55_02760 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D APS55_06925 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D APS55_04980 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D APS55_07210 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_01420 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_05300 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_02380 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_01160 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_01180 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_07220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_05280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_01430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_02390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_01165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_01425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_02385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_05295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_07215 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lku03009]
D APS55_06565 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D APS55_06075 era; GTPase Era K03595 era; GTPase
D APS55_05755 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D APS55_05890 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D APS55_06445 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D APS55_00990 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D APS55_01350 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D APS55_06505 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D APS55_00945 16S rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D APS55_05670 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D APS55_05975 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D APS55_01550 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D APS55_05485 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D APS55_00895 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D APS55_06470 cell division protein FtsJ K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D APS55_05465 23S rRNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D APS55_01015 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D APS55_03365 rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D APS55_05090 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D APS55_06165 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D APS55_04695 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D APS55_01905 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D APS55_06750 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D APS55_05460 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D APS55_00880 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D APS55_02160 hypothetical protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D APS55_02165 hypothetical protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D APS55_06615 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D APS55_05970 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D APS55_07375 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D APS55_01020 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D APS55_01270 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D APS55_07390 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D APS55_06520 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D APS55_06200 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D APS55_06255 rbgA; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D APS55_04605 GTPase HflX K03665 hflX; GTPase
D APS55_06910 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D APS55_00110 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D APS55_05980 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D APS55_05910 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D APS55_05885 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D APS55_02740 RNA-binding protein K14761 rlbA; ribosome-associated protein
D APS55_06890 ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D APS55_06065 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D APS55_06905 hypothetical protein K07574 yhbY; RNA-binding protein
D APS55_01530 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D APS55_06875 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lku03016]
D APS55_05760 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D APS55_06220 tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D APS55_05875 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D APS55_05545 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D APS55_07130 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D APS55_01365 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D APS55_07040 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D APS55_01185 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D APS55_06005 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D APS55_07385 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D APS55_00570 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D APS55_06935 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D APS55_04775 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D APS55_01025 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D APS55_07510 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D APS55_06000 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APS55_06310 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D APS55_06315 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D APS55_01435 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D APS55_01395 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D APS55_05985 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D APS55_07010 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D APS55_06995 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D APS55_05020 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D APS55_05915 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D APS55_07525 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_05570 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_00110 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D APS55_06395 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D APS55_02780 tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D APS55_02785 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D APS55_02765 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D APS55_06085 glyQ; glycine--tRNA ligase K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D APS55_06090 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D APS55_01030 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D APS55_01930 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D APS55_00940 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D APS55_01190 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D APS55_06620 hypothetical protein K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D APS55_06105 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D APS55_05470 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D APS55_06295 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D APS55_05580 tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D APS55_07520 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D APS55_01210 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D APS55_00885 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D APS55_00875 tRNA threonylcarbamoyl adenosine modification protein TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D APS55_00700 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D APS55_06880 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D APS55_00720 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:lku03012]
D APS55_05905 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D APS55_06930 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D APS55_00870 multidrug ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D APS55_05840 elongation factor Ts K02357 tsf; elongation factor Ts
D APS55_05725 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D APS55_04855 fusA; elongation factor G K02355 fusA; elongation factor G
D APS55_00120 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D APS55_05850 ribosome recycling factor K02838 frr; ribosome recycling factor
D APS55_00115 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D APS55_01240 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D APS55_04975 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D APS55_06435 elongation factor P K02356 efp; elongation factor P
D APS55_00825 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D APS55_05240 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lku03110]
D APS55_06120 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D APS55_04825 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D APS55_05250 ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D APS55_03130 ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D APS55_05735 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D APS55_05935 dnaK; Fe-S protein assembly chaperone HscA K04043 dnaK; molecular chaperone DnaK
D APS55_00855 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APS55_05940 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D APS55_01195 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D APS55_05930 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D APS55_02255 molecular chaperone K13993 HSP20; HSP20 family protein
D APS55_02260 molecular chaperone K13993 HSP20; HSP20 family protein
D APS55_00860 molecular chaperone GroES K04078 groES; chaperonin GroES
D APS55_02525 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D APS55_01200 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D APS55_00095 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D APS55_05785 hypothetical protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D APS55_07225 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D APS55_07020 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D APS55_07350 thioredoxin K03671 TXN; thioredoxin
D APS55_01795 thiol-disulfide isomerase K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:lku04131]
D APS55_00750 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APS55_01470 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_01060 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_06135 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lku03032]
D APS55_03010 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APS55_06730 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APS55_06205 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D APS55_02755 chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D APS55_02685 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D APS55_00400 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D APS55_06095 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D APS55_06945 hypothetical protein K03346 dnaB; replication initiation and membrane attachment protein
D APS55_06940 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D APS55_02705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_00410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_06130 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APS55_05880 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D APS55_02750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APS55_05700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APS55_00905 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APS55_00690 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APS55_00935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APS55_06260 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D APS55_06965 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D APS55_05060 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D APS55_02725 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D APS55_02730 gyrB; DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D APS55_06845 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D APS55_06850 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D APS55_06270 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lku03036]
D APS55_06565 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D APS55_06205 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D APS55_02755 chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D APS55_06570 hypothetical protein K03529 smc; chromosome segregation protein
D APS55_06155 hypothetical protein K05896 scpA; segregation and condensation protein A
D APS55_06160 hypothetical protein K06024 scpB; segregation and condensation protein B
D APS55_05520 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D APS55_01220 hypothetical protein K13052 divIC; cell division protein DivIC
D APS55_05475 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D APS55_05490 hypothetical protein K03586 ftsL; cell division protein FtsL
D APS55_05515 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D APS55_05660 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D APS55_05525 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D APS55_07365 cell division protein FtsZ K09888 zapA; cell division protein ZapA
D APS55_02950 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D APS55_07530 hypothetical protein K06286 ezrA; septation ring formation regulator
D APS55_07485 cell division inhibitor K03610 minC; septum site-determining protein MinC
D APS55_07480 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D APS55_05540 hypothetical protein K04074 divIVA; cell division initiation protein
D APS55_05530 hypothetical protein K09772 sepF; cell division inhibitor SepF
D APS55_07620 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_00045 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_07500 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_07495 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D APS55_07490 hypothetical protein K03571 mreD; rod shape-determining protein MreD
D APS55_07610 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D APS55_00035 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D APS55_01545 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D APS55_01540 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D APS55_06845 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D APS55_06850 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D APS55_02785 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D APS55_01550 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D APS55_06275 recombinase XerC K03733 xerC; integrase/recombinase XerC
D APS55_06145 recombinase XerD K04763 xerD; integrase/recombinase XerD
D APS55_05740 GTP-binding protein K03978 engB; GTP-binding protein
D APS55_00765 sporulation regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lku03400]
D APS55_00710 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D APS55_04390 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D APS55_01045 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D APS55_03935 hypothetical protein K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D APS55_07570 hypothetical protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D APS55_06960 5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D APS55_06040 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D APS55_05765 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D APS55_05060 ligA; aromatic ring-opening dioxygenase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D APS55_06965 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D APS55_00775 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A
D APS55_00780 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D APS55_05750 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D APS55_04640 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_05055 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_01400 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APS55_04830 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D APS55_04835 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D APS55_04995 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D APS55_01300 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D APS55_06485 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D APS55_01235 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D APS55_07420 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D APS55_07355 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D APS55_07415 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D APS55_06455 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D APS55_06460 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D APS55_06130 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APS55_05880 polC; DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D APS55_02750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APS55_05700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APS55_00905 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APS55_00690 DNA polymerase III subunit alpha K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APS55_00935 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APS55_02705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_00410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_05595 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D APS55_07435 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D APS55_07410 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D APS55_07405 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D APS55_06495 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D APS55_01040 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D APS55_02735 recombinase RecF K03629 recF; DNA replication and repair protein RecF
D APS55_06550 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D APS55_06080 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D APS55_00925 recombination protein RecR K06187 recR; recombination protein RecR
D APS55_06475 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D APS55_06705 recU; Holliday junction endonuclease K03700 recU; recombination protein U
D APS55_03075 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D APS55_03070 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D APS55_02725 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D APS55_02730 gyrB; DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D APS55_06270 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D APS55_06205 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D APS55_06180 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D APS55_03735 excinuclease ABC subunit A K03502 umuC; DNA polymerase V
D APS55_00465 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D APS55_05800 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D APS55_05225 hypothetical protein K03565 recX; regulatory protein
D APS55_06685 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D APS55_00955 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D APS55_00960 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D APS55_07395 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lku03029]
D APS55_05905 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D APS55_06930 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D APS55_05840 elongation factor Ts K02357 tsf; elongation factor Ts
D APS55_05725 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D APS55_04855 fusA; elongation factor G K02355 fusA; elongation factor G
D APS55_06075 era; GTPase Era K03595 era; GTPase
D APS55_01435 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D APS55_07130 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D APS55_06005 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D APS55_07040 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D APS55_05075 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D APS55_05080 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D APS55_05070 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D APS55_02705 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_00410 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D APS55_05935 dnaK; Fe-S protein assembly chaperone HscA K04043 dnaK; molecular chaperone DnaK
D APS55_05930 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D APS55_00855 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APS55_00860 molecular chaperone GroES K04078 groES; chaperonin GroES
D APS55_05940 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D APS55_07525 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_05570 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_02770 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APS55_06285 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lku02000]
D APS55_00150 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D APS55_00145 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D APS55_06225 multidrug ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D APS55_04235 glycine/betaine ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D APS55_04240 glycine/betaine ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D APS55_04245 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D APS55_05150 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APS55_05155 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APS55_05160 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D APS55_05165 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D APS55_05170 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D APS55_05175 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D APS55_03125 glutamine ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D APS55_03120 peptide ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D APS55_03180 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D APS55_03190 cysteine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D APS55_03185 arginine ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D APS55_02835 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D APS55_02840 glnQ; glutamine ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D APS55_07595 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D APS55_04270 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D APS55_00020 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D APS55_07600 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D APS55_00025 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D APS55_04280 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D APS55_07605 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D APS55_00030 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D APS55_04275 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D APS55_04550 peptide ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D APS55_04545 branched-chain amino acid ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D APS55_04540 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D APS55_07465 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D APS55_07475 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D APS55_07470 polar amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D APS55_03825 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_03630 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_03635 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_02670 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_04610 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D APS55_04615 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D APS55_04620 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D APS55_04625 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D APS55_04630 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D APS55_04165 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D APS55_04155 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D APS55_04160 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D APS55_04145 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D APS55_01975 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D APS55_04470 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D APS55_05015 cobalt ABC transporter ATP-binding protein K16785 ecfT; energy-coupling factor transport system permease protein
D APS55_05005 cbiO; energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D APS55_05010 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D APS55_04475 hypothetical protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D APS55_04480 ABC transporter permease K16925 ykoE; energy-coupling factor transport system permease protein
D APS55_03270 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D APS55_02960 ABC transporter K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D APS55_02955 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D APS55_03650 hypothetical protein K11051 cylB; multidrug/hemolysin transport system permease protein
D APS55_03645 hypothetical protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D APS55_06030 Teichoic acid translocation permease TagG K09692 tagG; teichoic acid transport system permease protein
D APS55_04445 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D APS55_04450 hypothetical protein K20492 nisG; lantibiotic transport system permease protein
D APS55_04440 lantibiotic ABC transporter ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D APS55_07000 hypothetical protein K25157 ecsB; ABC-2 type transport system permease protein
D APS55_07005 multidrug ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D APS55_03080 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D APS55_03895 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D APS55_02025 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D APS55_03085 sodium ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D APS55_07585 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D APS55_03900 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D APS55_00015 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D APS55_02030 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D APS55_03255 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D APS55_03215 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D APS55_03260 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D APS55_02615 Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D APS55_03810 hypothetical protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D APS55_03545 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D APS55_02720 hypothetical protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D APS55_05255 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D APS55_03590 glycerol uptake permease K02440 glpF; glycerol uptake facilitator
D APS55_04405 hypothetical protein K02440 glpF; glycerol uptake facilitator
D APS55_01835 hypothetical protein K10716 kch; voltage-gated potassium channel
D APS55_01885 ammonia permease K03320 amt; ammonium transporter, Amt family
D APS55_07100 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D APS55_03195 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel
D APS55_03200 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel
D APS55_00605 hypothetical protein K03284 corA; magnesium transporter
D APS55_03000 hypothetical protein K06199 crcB; fluoride exporter
D APS55_03005 hypothetical protein K06199 crcB; fluoride exporter
D APS55_02310 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D APS55_02460 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D APS55_04765 gamma-aminobutyrate permease K11733 lysP; lysine-specific permease
D APS55_04380 hypothetical protein K16235 mmuP; S-methylmethionine transporter
D APS55_05610 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D APS55_04715 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D APS55_03915 hypothetical protein K03297 emrE; small multidrug resistance pump
D APS55_00600 hypothetical protein K05340 glcU; glucose uptake protein
D APS55_05190 ribose transporter RbsU K06216 rbsU; putative ribose uptake protein
D APS55_02925 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D APS55_05195 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D APS55_02375 glutamate:protein symporter K11102 gltP; proton glutamate symport protein
D APS55_01790 sodium:proton antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D APS55_00680 hypothetical protein K24163 nhaK; monovalent cation/hydrogen antiporter
D APS55_02575 hypothetical protein K26730 napA; Na+:H+ antiporter
D APS55_05950 uracil permease K02824 uraA; uracil permease
D APS55_04425 Uric acid permease PucJ K16169 pbuX; xanthine permease
D APS55_03020 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D APS55_01555 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D APS55_01560 nucleoside permease K16323 yxjA; purine nucleoside transport protein
D APS55_00730 hypothetical protein K03281 clcA; chloride channel protein, CIC family
D APS55_02495 manganese transporter K03322 mntH; manganese transport protein
D APS55_02465 malate permease K24180 mleP; malate permease and related proteins
D APS55_00625 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D APS55_01500 branched-chain amino acid ABC transporter K26605 azlC; branched chain amino acid efflux pump
D APS55_04600 azaleucine resistance protein AzlC K26605 azlC; branched chain amino acid efflux pump
D APS55_01495 branched-chain amino acid transporter K26606 azlD; branched chain amino acid efflux pump
D APS55_04595 branched-chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump
D APS55_06170 hypothetical protein K23675 fmnP; riboflavin transporter
D APS55_04295 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D APS55_04290 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D APS55_05660 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D APS55_03770 hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D APS55_03765 hypothetical protein K19420 epsA; protein tyrosine kinase modulator
D APS55_03690 hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter
C 02044 Secretion system [BR:lku02044]
D APS55_05685 hypothetical protein K02237 comEA; competence protein ComEA
D APS55_05690 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D APS55_05695 hypothetical protein K02238 comEC; competence protein ComEC
D APS55_00840 hypothetical protein K02240 comFA; competence protein ComFA
D APS55_00835 hypothetical protein K02242 comFC; competence protein ComFC
D APS55_07310 hypothetical protein K02243 comGA; competence protein ComGA
D APS55_07305 hypothetical protein K02244 comGB; competence protein ComGB
D APS55_07300 competence protein ComGC K02245 comGC; competence protein ComGC
D APS55_07295 hypothetical protein K02246 comGD; competence protein ComGD
D APS55_04840 hypothetical protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D APS55_00830 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D APS55_00995 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D APS55_00725 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D APS55_04965 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D APS55_06585 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D APS55_06575 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D APS55_07400 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D APS55_02770 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APS55_06285 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:lku02042]
D APS55_02310 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D APS55_03910 hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lku02022]
D APS55_05185 hypothetical protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D APS55_02545 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D APS55_02550 PhoP family transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D APS55_02270 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D APS55_02275 two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D APS55_06860 histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D APS55_06865 PhoB family transcriptional regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
C 02035 Bacterial motility proteins [BR:lku02035]
D APS55_03180 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lku04812]
D APS55_07620 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_00045 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_07500 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_05525 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D APS55_05520 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D APS55_07485 cell division inhibitor K03610 minC; septum site-determining protein MinC
D APS55_07480 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D APS55_01545 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D APS55_01540 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lku04147]
D APS55_00735 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APS55_00750 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APS55_00745 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D APS55_06135 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D APS55_00855 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APS55_05935 dnaK; Fe-S protein assembly chaperone HscA K04043 dnaK; molecular chaperone DnaK
D APS55_02125 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D APS55_01520 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D APS55_05725 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D APS55_07010 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D APS55_07055 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_01245 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D APS55_02395 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D APS55_04970 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D APS55_05770 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D APS55_02830 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D APS55_02825 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D APS55_06640 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D APS55_06405 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APS55_04210 hypothetical protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D APS55_03455 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D APS55_02325 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D APS55_00740 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D APS55_01470 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D APS55_01060 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lku02048]
D APS55_00485 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D APS55_07280 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D APS55_02560 helicase K01156 res; type III restriction enzyme [EC:3.1.21.5]
D APS55_05100 type III restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5]
D APS55_02565 hypothetical protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D APS55_05095 hypothetical protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D APS55_05115 restriction endonuclease K07448 mrr; restriction system protein
D APS55_02300 hypothetical protein K07448 mrr; restriction system protein
D APS55_01255 PemK family transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D APS55_00815 hypothetical protein K03973 pspC; phage shock protein C
D APS55_05525 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D APS55_07620 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_00045 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_07500 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D APS55_06845 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D APS55_06850 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D APS55_07525 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APS55_05570 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lku01504]
D APS55_02720 hypothetical protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D APS55_00965 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lku03100]
D APS55_01170 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APS55_05290 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APS55_04810 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_05330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_05145 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_06415 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_00755 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APS55_01155 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_07205 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_03225 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_03230 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_03235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APS55_05360 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APS55_07185 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APS55_05395 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APS55_07155 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D APS55_01075 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_01135 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_00355 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_00505 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_07160 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APS55_05385 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APS55_05400 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APS55_07195 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APS55_00510 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APS55_07045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APS55_04800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APS55_05320 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APS55_05370 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APS55_01080 tRNA-His K14226 tRNA-His; tRNA His
D APS55_07165 tRNA-His K14226 tRNA-His; tRNA His
D APS55_01175 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APS55_05375 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APS55_05285 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APS55_07150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_04805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_05325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_01085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_04790 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APS55_02555 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APS55_05310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APS55_04785 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APS55_05355 tRNA-Met K14230 tRNA-Met; tRNA Met
D APS55_05345 tRNA-Met K14230 tRNA-Met; tRNA Met
D APS55_05340 tRNA-Met K14230 tRNA-Met; tRNA Met
D APS55_05390 tRNA-Met K14230 tRNA-Met; tRNA Met
D APS55_05365 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D APS55_07180 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D APS55_04815 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D APS55_05335 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D APS55_07200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_05350 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_05405 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_05380 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_05775 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APS55_00345 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_01150 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_01415 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_04795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_05315 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APS55_07170 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D APS55_01140 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D APS55_07175 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D APS55_04780 tRNA-Val K14237 tRNA-Val; tRNA Val
D APS55_05305 tRNA-Val K14237 tRNA-Val; tRNA Val
D APS55_07190 tRNA-Val K14237 tRNA-Val; tRNA Val
D APS55_01180 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_07220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_05280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_01430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_02390 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D APS55_01165 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_01425 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_02385 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_05295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_07215 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D APS55_07210 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_01420 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_05300 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_02380 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D APS55_01160 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D APS55_02020 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D APS55_03025 oxidoreductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D APS55_05605 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D APS55_00560 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D APS55_03555 NADPH dehydrogenase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D APS55_06820 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D APS55_06825 hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D APS55_03245 NAD(FAD)-dependent dehydrogenase K05910 npr; NADH peroxidase [EC:1.11.1.1]
D APS55_03065 manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D APS55_07515 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D APS55_03360 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D APS55_01840 ferredoxin-NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D APS55_02610 ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D APS55_01480 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D APS55_06720 RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D APS55_02650 hypothetical protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D APS55_04200 galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D APS55_00800 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D APS55_06545 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D APS55_06045 phosphotransferase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D APS55_00670 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D APS55_00805 serine kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D APS55_03775 tyrosine protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D APS55_01705 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D APS55_06915 HAD family hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D APS55_02695 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D APS55_01360 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D APS55_01355 DNA primase K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D APS55_05635 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D APS55_01465 polysaccharide deacetylase K21478 icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
D APS55_07115 carbohydrate kinase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D APS55_07070 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D APS55_05415 ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D APS55_01945 magnesium-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D APS55_02630 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D APS55_06800 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D APS55_04400 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D APS55_02315 hypothetical protein K03647 nrdI; protein involved in ribonucleotide reduction
D APS55_01590 DNA-entry nuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D APS55_05270 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D APS55_06150 hypothetical protein K02859 ribT; riboflavin biosynthesis RibT protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D APS55_04140 cold-shock protein K03704 cspA; cold shock protein
D APS55_05550 hypothetical protein K03704 cspA; cold shock protein
D APS55_01860 transcriptional regulator K16509 spxA; regulatory protein spx
D APS55_01100 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D APS55_01215 RNA-binding protein S1 K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D APS55_05730 tig; trigger factor K03545 tig; trigger factor
D APS55_00715 SsrA-binding protein K03664 smpB; SsrA-binding protein
D APS55_00950 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH
D APS55_05430 hypothetical protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D APS55_05825 hypothetical protein K07461 K07461; putative endonuclease
D APS55_06265 hypothetical protein K04096 smf; DNA processing protein
D APS55_06695 hypothetical protein K02086 dnaD; DNA replication protein
D APS55_00335 hypothetical protein K07474 xtmA; phage terminase small subunit
D APS55_07550 recombinase RarA K07478 ycaJ; putative ATPase
D APS55_02895 hypothetical protein K07483 K07483; transposase
D APS55_03175 hypothetical protein K07483 K07483; transposase
D APS55_03865 hypothetical protein K07483 K07483; transposase
D APS55_03520 hypothetical protein K07483 K07483; transposase
D APS55_03575 hypothetical protein K07483 K07483; transposase
D APS55_02580 hypothetical protein K07483 K07483; transposase
D APS55_07235 hypothetical protein K07483 K07483; transposase
D APS55_03295 hypothetical protein K07483 K07483; transposase
D APS55_03345 hypothetical protein K07483 K07483; transposase
D APS55_04110 hypothetical protein K07483 K07483; transposase
D APS55_04460 hypothetical protein K07483 K07483; transposase
D APS55_01715 hypothetical protein K07483 K07483; transposase
D APS55_06335 hypothetical protein K07483 K07483; transposase
D APS55_06385 hypothetical protein K07483 K07483; transposase
D APS55_00540 hypothetical protein K07483 K07483; transposase
D APS55_02195 hypothetical protein K07483 K07483; transposase
D APS55_01600 hypothetical protein K07483 K07483; transposase
D APS55_02075 hypothetical protein K07483 K07483; transposase
D APS55_04180 hypothetical protein K07483 K07483; transposase
D APS55_04505 hypothetical protein K07483 K07483; transposase
D APS55_00585 hypothetical protein K07483 K07483; transposase
D APS55_06015 hypothetical protein K07483 K07483; transposase
D APS55_01595 hypothetical protein K07497 K07497; putative transposase
D APS55_01720 transposase K07497 K07497; putative transposase
D APS55_06340 transposase K07497 K07497; putative transposase
D APS55_06390 transposase K07497 K07497; putative transposase
D APS55_02070 hypothetical protein K07497 K07497; putative transposase
D APS55_02190 transposase K07497 K07497; putative transposase
D APS55_07240 transposase K07497 K07497; putative transposase
D APS55_02890 transposase K07497 K07497; putative transposase
D APS55_02930 hypothetical protein K07497 K07497; putative transposase
D APS55_03170 transposase K07497 K07497; putative transposase
D APS55_03300 transposase K07497 K07497; putative transposase
D APS55_03340 transposase K07497 K07497; putative transposase
D APS55_03525 transposase K07497 K07497; putative transposase
D APS55_03580 transposase K07497 K07497; putative transposase
D APS55_03860 transposase K07497 K07497; putative transposase
D APS55_04115 transposase K07497 K07497; putative transposase
D APS55_04185 hypothetical protein K07497 K07497; putative transposase
D APS55_04455 transposase K07497 K07497; putative transposase
D APS55_04510 hypothetical protein K07497 K07497; putative transposase
D APS55_00545 transposase K07497 K07497; putative transposase
D APS55_00580 hypothetical protein K07497 K07497; putative transposase
D APS55_06010 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D APS55_00930 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D APS55_03040 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D APS55_03045 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D APS55_03875 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family
D APS55_03880 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family
D APS55_07270 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family
D APS55_03870 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D APS55_04090 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D APS55_04495 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D APS55_05125 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D APS55_04205 glycine/betaine ABC transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D APS55_01145 hypothetical protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D APS55_03715 branched-chain amino acid ABC transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D APS55_03725 branched-chain amino acid ABC transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D APS55_02775 hypothetical protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D APS55_05655 GTP-binding protein TypA K06207 typA; GTP-binding protein
D APS55_06060 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D APS55_05135 hypothetical protein K07273 acm; lysozyme
C 99994 Others
D APS55_05180 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D APS55_01640 GNAT family acetyltransferase K02348 elaA; ElaA protein
D APS55_05435 hypothetical protein K06198 coiA; competence protein CoiA
D APS55_06985 disulfide bond formation protein DsbA K06878 K06878; tRNA-binding protein
D APS55_04080 MMPL family protein K06994 K06994; putative drug exporter of the RND superfamily
D APS55_02635 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D APS55_02620 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D APS55_06810 hypothetical protein K07038 K07038; inner membrane protein
D APS55_05215 hypothetical protein K07058 K07058; membrane protein
D APS55_03705 hypothetical protein K03744 lemA; LemA protein
D APS55_01095 protein SprT-like protein K03095 sprL; SprT-like protein
D APS55_07230 cytochrome O ubiquinol oxidase K03975 dedA; membrane-associated protein
D APS55_00810 hypothetical protein K08972 K08972; putative membrane protein
D APS55_03945 hypothetical protein K08981 K08981; putative membrane protein
D APS55_00175 hypothetical protein K08987 K08987; putative membrane protein
C 99997 Function unknown
D APS55_03700 hypothetical protein K06872 K06872; uncharacterized protein
D APS55_01310 hypothetical protein K06885 K06885; uncharacterized protein
D APS55_01710 hydrolase K06889 K06889; uncharacterized protein
D APS55_01875 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D APS55_06970 hypothetical protein K06890 K06890; uncharacterized protein
D APS55_06300 hypothetical protein K06950 K06950; uncharacterized protein
D APS55_01935 phosphohydrolase K06950 K06950; uncharacterized protein
D APS55_06610 RNA-binding protein K06960 K06960; uncharacterized protein
D APS55_01010 DNA-binding protein K06962 K06962; uncharacterized protein
D APS55_01485 hypothetical protein K07035 K07035; uncharacterized protein
D APS55_01490 hypothetical protein K07035 K07035; uncharacterized protein
D APS55_03920 nitroreductase K07078 K07078; uncharacterized protein
D APS55_03610 permease K07090 K07090; uncharacterized protein
D APS55_02515 hypothetical protein K07090 K07090; uncharacterized protein
D APS55_02520 hypothetical protein K07090 K07090; uncharacterized protein
D APS55_04745 permease K07090 K07090; uncharacterized protein
D APS55_03385 hypothetical protein K07149 K07149; uncharacterized protein
D APS55_04085 hypothetical protein K07149 K07149; uncharacterized protein
D APS55_06055 hypothetical protein K09117 K09117; uncharacterized protein
D APS55_03940 hypothetical protein K09167 K09167; uncharacterized protein
D APS55_03975 DNA replication initiation protein K09384 K09384; uncharacterized protein
D APS55_06580 DNA-binding protein K09787 K09787; uncharacterized protein
D APS55_06140 DNA-binding protein K00243 K00243; uncharacterized protein
D APS55_05810 hypothetical protein K09976 K09976; uncharacterized protein
D APS55_06425 hypothetical protein K07584 ysxB; uncharacterized protein
D APS55_05895 DNA-binding protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024