+E Transcription factors KO #

  Transcription Factors - Lactococcus lactis subsp. lactis CV56

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D CVCAS_0441 adaA; methylphosphotriester-DNA alkyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] C LysR family D CVCAS_1203 rlrA; LysR family transcription regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D CVCAS_0357 rlrG; LysR family transcription regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D CVCAS_0923 fruR; DeoR family transcriptional regulator, fructose operon transcriptional repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CVCAS_1264 rdrB; DeoR family transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator C LacI family D CVCAS_1549 rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CVCAS_1557 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CVCAS_1585 rliA; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CVCAS_0686 rliC; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CVCAS_0600 scrR; sucrose operon repressor, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D CVCAS_0410 rgrA; GntR family transcriptional regulator, trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D CVCAS_1346 rgrB; GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator C TetR/AcrR family C Lrp/AsnC family C LuxR family C MarR family D CVCAS_1388 rmaE; transcriptional regulator, MarR family K18909 mepR; MarR family transcriptional regulator, repressor for mepA D CVCAS_0501 rmaJ; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D CVCAS_2247 glnR; MerR family transcriptional regulator, glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor C Fur family D CVCAS_1382 fur; Fur family transcriptional regulator, ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family C CRP/FNR family D CVCAS_1991 rcfA; CRP/FNR family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family C ArsR family D CVCAS_1514 rarA; transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family C PadR family D CVCAS_1932 yucF; PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D CVCAS_0294 ydaF; transcriptional regulator, PadR family K26742 lmrR; PadR family transcriptional regulator, multidrug transcriptional repressor LmrR D CVCAS_2047 yveF; PadR family transcriptional regulator, regulatory protein PadR K10947 K10947; PadR family transcriptional regulator C Other families D CVCAS_1222 ymiA; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CVCAS_1713 birA1; BirA family transcriptional regulator, biotin operon repressor / biotin-acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CVCAS_1903 birA2; BirA family transcriptional regulator, biotin operon repressor / biotin-acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CVCAS_1974 nadR; transcription regulator/NMN adenylyltransferase/ribosylnicotinamide kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D CVCAS_0053 HTH-type transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator D CVCAS_2345 purR; purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D CVCAS_1029 rex; redox-sensing transcriptional repressor K01926 rex; redox-sensing transcriptional repressor D CVCAS_0139 codY; transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor D CVCAS_1662 transcriptional regulator K07727 K07727; putative transcriptional regulator D CVCAS_1663 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D CVCAS_0311 ydcG; Cro/CI family transcriptional regulator K07729 K07729; putative transcriptional regulator D CVCAS_2295 putative transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family D CVCAS_1368 bglR; beta-glucoside operon transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D CVCAS_0024 mtlR; transcriptional regulator, DeoR family K03483 mtlR; mannitol operon transcriptional activator C Others D CVCAS_0082 parA; chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CVCAS_0820 ahrC; transcriptional regulator of arginine metabolism K03402 argR; transcriptional regulator of arginine metabolism D CVCAS_2026 argR; arginine operon repressor K03402 argR; transcriptional regulator of arginine metabolism D CVCAS_0918 hrcA; heat-inducible transcriptional repressor K03705 hrcA; heat-inducible transcriptional repressor D CVCAS_1711 tenA; transcriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CVCAS_0551 ctsR; transcriptional repressor CstR K03708 ctsR; transcriptional regulator of stress and heat shock response D CVCAS_1905 ythB; stress-responsive transcriptional regulator, PspC family K03973 pspC; phage shock protein C D CVCAS_1512 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CVCAS_0712 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D CVCAS_2179 comX; competence-specific transcriptional regulator ComX family K12296 comX1_2; competence protein ComX ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0