+E Transcription factors KO
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Transcription Factors - Listeria monocytogenes SLCC2372 (serotype 1/2c)
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D LMOSLCC2372_0076 ada; Ada regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LMOSLCC2372_2311 adaA; methylphosphotriester-DNA alkyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
C LysR family
D LMOSLCC2372_1801 gltC; transcriptional activator of the glutamate synthase operon K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D LMOSLCC2372_0500 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D LMOSLCC2372_2414 transcriptional regulator, LysR family K21960 ytlI; LysR family transcriptional regulator, regulator of the ytmI operon
C DeoR family
D LMOSLCC2372_2399 fruR; transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D LMOSLCC2372_0386 iolR; transcriptional regulator, DeoR family K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
D LMOSLCC2372_2175 glcR; putative transcriptional regulator of sugar metabolism, DeoR family K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D LMOSLCC2372_1931 conserved domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
C LacI family
D LMOSLCC2372_1664 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LMOSLCC2372_1793 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LMOSLCC2372_0031 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LMOSLCC2372_0745 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LMOSLCC2372_2060 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LMOSLCC2372_1044 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LMOSLCC2372_0869 DNA-binding transcriptional regulator, lacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
C GntR family
D LMOSLCC2372_1314 treR; trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D LMOSLCC2372_0915 transcriptional regulator, GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D LMOSLCC2372_0584 transcriptional regulator, GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D LMOSLCC2372_0373 transcriptional regulator, GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D LMOSLCC2372_0971 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D LMOSLCC2372_2040 putative transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D LMOSLCC2372_2212 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator
D LMOSLCC2372_2309 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
C TetR/AcrR family
D LMOSLCC2372_2028 transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator
C Lrp/AsnC family
C LuxR family
C MarR family
D LMOSLCC2372_1003 transcriptional regulator, MarR family K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D LMOSLCC2372_2268 ohrR; putative organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D LMOSLCC2372_1359 glnR; transcriptional glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D LMOSLCC2372_1854 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D LMOSLCC2372_2807 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
C Fur family
D LMOSLCC2372_2022 fur; transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LMOSLCC2372_1507 zurR; transcriptional regulator (zinc-specific uptake regulation) K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D LMOSLCC2372_1749 perR; peroxide operon transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D LMOSLCC2372_0201 prfA; positive regulatory factor A K21560 prfA; CRP/FNR family transcriptional regulator, listeriolysin regulatory protein
D LMOSLCC2372_0763 transcriptional regulator, Crp family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D LMOSLCC2372_1577 transcriptional regulator, Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
C ArsR family
D LMOSLCC2372_2753 arsR; transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LMOSLCC2372_p0029 cadC; cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D LMOSLCC2372_2555 transcriptional regulator, ArsR family K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
C PadR family
D LMOSLCC2372_1469 transcriptional regulator, PadR family K26741 ladR; PadR family transcriptional regulator, multidrug transcriptional repressor LadR
D LMOSLCC2372_0608 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D LMOSLCC2372_0731 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
C Other families
D LMOSLCC2372_1944 mntR; iron-dependent transcriptional repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D LMOSLCC2372_0253 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D LMOSLCC2372_1970 birA; bifunctional biotin operon repressor/biotin-[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LMOSLCC2372_0193 purR; Pur operon transcriptional repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D LMOSLCC2372_2139 redox-sensing transcriptional repressor/CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D LMOSLCC2372_1341 codY; GTP-sensing transcriptional pleiotropic repressor K03706 codY; transcriptional pleiotropic repressor
D LMOSLCC2372_0744 DNA-binding protein K07726 K07726; putative transcriptional regulator
D LMOSLCC2372_1472 DNA-binding domain protein K07727 K07727; putative transcriptional regulator
D LMOSLCC2372_0759 transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
D LMOSLCC2372_0419 HTH domain protein K07729 K07729; putative transcriptional regulator
D LMOSLCC2372_2471 HTH domain protein K07729 K07729; putative transcriptional regulator
D LMOSLCC2372_2387 putative HTH-type transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D LMOSLCC2372_0899 transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C Other families
B Other transcription factors
C BglG family
D LMOSLCC2372_2498 licT; transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D LMOSLCC2372_2867 bvrA; transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D LMOSLCC2372_2852 BigG family transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D LMOSLCC2372_2718 putative transcriptional antiterminator, BglG family K03483 mtlR; mannitol operon transcriptional activator
D LMOSLCC2372_0299 transcriptional antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D LMOSLCC2372_0931 transcriptional antiterminator, BglG family K03491 licR; probable licABCH operon transcriptional regulator
D LMOSLCC2372_2863 putative transcriptional antiterminator K03491 licR; probable licABCH operon transcriptional regulator
C Others
D LMOSLCC2372_1920 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D LMOSLCC2372_1678 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D LMOSLCC2372_0169 abrB; transition state regulatory protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D LMOSLCC2372_2869 chromosome partition protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMOSLCC2372_2873 chromosome partition protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMOSLCC2372_1466 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D LMOSLCC2372_1428 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D LMOSLCC2372_0179 xylose repressor protein K02565 nagC; N-acetylglucosamine repressor
D LMOSLCC2372_1537 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D LMOSLCC2372_0317 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D LMOSLCC2372_0231 ctsR; transcriptional repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response
D LMOSLCC2372_2547 PspC domain protein, truncated K03973 pspC; phage shock protein C
D LMOSLCC2372_2522 cggR; transcriptional regulator K05311 cggR; central glycolytic genes regulator
D LMOSLCC2372_2062 deoR; transcriptional repressor K05346 deoR; deoxyribonucleoside regulator
D LMOSLCC2372_1906 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D LMOSLCC2372_1625 putative transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D LMOSLCC2372_2395 similar to competence transcription factor ComK, C-terminal part K02250 comK; competence protein ComK
D LMOSLCC2372_2109 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0