+D GENES KO
#
KEGG Orthology (KO) - Lactobacillus panisapium
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lpai00010]
D GYM71_04140 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYM71_04775 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYM71_06965 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYM71_03845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYM71_03835 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYM71_06995 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYM71_03840 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GYM71_07510 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYM71_09115 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYM71_05615 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYM71_04780 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYM71_01750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_05370 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_08110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_08135 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GYM71_03740 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYM71_00090 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_02860 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_04210 family 1 glycosylhydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_04230 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_04250 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_05980 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_07070 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_07605 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_08055 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_09560 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_09510 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYM71_03325 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle)
D GYM71_05380 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
C 00030 Pentose phosphate pathway [PATH:lpai00030]
D GYM71_04140 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYM71_07200 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GYM71_03585 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D GYM71_10250 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GYM71_01520 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYM71_01655 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYM71_06100 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYM71_08305 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GYM71_02885 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GYM71_01660 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GYM71_09480 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GYM71_01550 SIS domain-containing protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D GYM71_09460 SIS domain-containing protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D GYM71_02955 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D GYM71_00640 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D GYM71_00745 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D GYM71_08115 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D GYM71_00645 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D GYM71_03740 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYM71_01045 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYM71_08600 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYM71_01275 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GYM71_01570 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GYM71_01645 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GYM71_01635 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D GYM71_06965 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYM71_04775 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:lpai00040]
D GYM71_03410 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D GYM71_03385 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D GYM71_03370 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D GYM71_03390 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D GYM71_03405 hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]
D GYM71_03460 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYM71_00300 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D GYM71_01325 3-dehydro-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D GYM71_00305 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D GYM71_01330 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D GYM71_00310 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GYM71_01335 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GYM71_08145 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GYM71_01520 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYM71_01655 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYM71_06100 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYM71_08140 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D GYM71_06845 sugar phosphate isomerase/epimerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D GYM71_02035 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D GYM71_02050 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D GYM71_10065 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:lpai00051]
D GYM71_02935 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYM71_07655 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYM71_08325 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYM71_04105 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GYM71_10065 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D GYM71_02045 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D GYM71_02035 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D GYM71_02050 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D GYM71_04775 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYM71_09005 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D GYM71_06845 sugar phosphate isomerase/epimerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D GYM71_06965 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYM71_03845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYM71_01660 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GYM71_09480 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GYM71_02905 PTS transporter subunit EIIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GYM71_07685 PTS transporter subunit EIIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GYM71_02910 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GYM71_07680 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GYM71_02915 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_07675 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_09000 PTS transporter subunit EIIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_01230 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_01710 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_02210 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_02830 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_08535 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_09805 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_10015 PTS N-acetylglucosamine transporter subunit IIBC K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_01970 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GYM71_00730 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01240 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01975 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_02200 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_08355 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_09815 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_10025 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01245 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_01725 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_01980 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_02205 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_08350 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_09810 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_10020 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_03595 PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
C 00052 Galactose metabolism [PATH:lpai00052]
D GYM71_08135 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GYM71_07500 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GYM71_07495 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D GYM71_02005 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYM71_03460 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYM71_03740 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYM71_04190 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D GYM71_01525 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_01575 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_02165 PTS transporter subunit EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_08845 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_09465 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_10050 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_01535 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_01580 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_08835 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_09470 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_10055 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_00280 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_01530 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_01585 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_08840 PTS sugar transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_09475 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_10060 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_10040 1-phosphofructokinase family hexose kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D GYM71_04775 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYM71_02225 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D GYM71_01590 dgoD; galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D GYM71_02155 lacA; galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D GYM71_02160 lacB; galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D GYM71_00385 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_00835 family 43 glycosylhydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_00845 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_02920 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_08335 glycoside hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_09650 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D GYM71_01620 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02190 SIS domain-containing protein K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
D GYM71_01605 agaB; PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D GYM71_01610 agaC; PTS N-acetylgalactosamine transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component
D GYM71_01615 agaD; PTS N-acetylgalactosamine transporter subunit IID K10986 agaD; galactosamine PTS system EIID component
C 00053 Ascorbate and aldarate metabolism [PATH:lpai00053]
D GYM71_01310 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GYM71_01265 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_01320 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_08315 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_01270 PTS transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_01315 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_08310 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_01305 ulaG; L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D GYM71_01325 3-dehydro-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D GYM71_00305 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D GYM71_01330 L-ribulose-5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D GYM71_00310 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GYM71_01335 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GYM71_08145 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D GYM71_00300 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
C 00500 Starch and sucrose metabolism [PATH:lpai00500]
D GYM71_00380 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_00840 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_08610 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_00385 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_00835 family 43 glycosylhydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_00845 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_02920 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_08335 glycoside hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D GYM71_09650 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D GYM71_03460 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYM71_00375 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GYM71_02855 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_09725 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_10305 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_02850 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_04235 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_09710 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_10300 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_00315 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_02870 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_03355 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_04225 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_07065 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_07600 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_08630 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_09715 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_10095 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_10295 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_00090 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_02860 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_04210 family 1 glycosylhydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_04230 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_04250 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_05980 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_07070 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_07605 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_08055 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_09560 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D GYM71_09645 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D GYM71_09640 glycoside hydrolase family 65 protein K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D GYM71_04155 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D GYM71_09635 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D GYM71_09510 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYM71_00500 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYM71_09525 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYM71_09530 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D GYM71_00510 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D GYM71_03740 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYM71_04140 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYM71_02935 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYM71_07655 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYM71_08325 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lpai00520]
D GYM71_04165 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GYM71_09510 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYM71_09490 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D GYM71_10175 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D GYM71_02935 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYM71_07655 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYM71_08325 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GYM71_03920 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GYM71_03915 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GYM71_08650 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GYM71_08605 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D GYM71_08380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYM71_03900 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYM71_03320 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D GYM71_03435 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D GYM71_04200 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D GYM71_04220 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D GYM71_03325 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D GYM71_03740 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYM71_03460 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYM71_07500 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GYM71_07495 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D GYM71_02005 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYM71_01230 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_01710 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_02210 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_02830 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_08535 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_09805 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_10015 PTS N-acetylglucosamine transporter subunit IIBC K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_01970 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GYM71_00730 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01240 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01975 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_02200 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_08355 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_09815 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_10025 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01245 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_01725 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_01980 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_02205 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_08350 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_09810 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_10020 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_04140 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYM71_04105 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:lpai00620]
D GYM71_04070 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYM71_03885 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYM71_04780 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYM71_08400 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GYM71_08420 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYM71_08410 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYM71_08405 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GYM71_06695 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D GYM71_10255 spxB; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D GYM71_01750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_05370 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_08110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_00515 D-2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D GYM71_03340 D-2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D GYM71_08330 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GYM71_05380 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GYM71_01915 NAD-dependent malic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lpai00630]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_02090 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GYM71_06620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYM71_01275 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GYM71_01570 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GYM71_01645 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:lpai00640]
D GYM71_04070 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYM71_03885 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYM71_00595 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D GYM71_08400 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GYM71_08420 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYM71_08410 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYM71_08405 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GYM71_01750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_05370 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_08110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:lpai00650]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_00595 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D GYM71_01895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GYM71_03475 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D GYM71_08205 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism
D GYM71_08205 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00562 Inositol phosphate metabolism
D GYM71_03845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lpai00190]
D GYM71_04335 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GYM71_04345 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GYM71_04340 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GYM71_04330 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GYM71_04350 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GYM71_04315 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GYM71_04325 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GYM71_04320 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GYM71_05630 HAD-IC family P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D GYM71_04960 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lpai00710]
D GYM71_03840 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GYM71_03835 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYM71_06995 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYM71_06965 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYM71_08305 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GYM71_02885 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GYM71_01660 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GYM71_09480 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D GYM71_03845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYM71_01520 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYM71_01655 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GYM71_06100 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:lpai00720]
D GYM71_05380 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_08400 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GYM71_08420 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYM71_08410 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYM71_08405 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GYM71_05015 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GYM71_06180 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GYM71_03885 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYM71_04070 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:lpai00680]
D GYM71_02090 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GYM71_05615 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYM71_06965 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GYM71_04775 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYM71_01550 SIS domain-containing protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D GYM71_09460 SIS domain-containing protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D GYM71_04070 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GYM71_03885 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYM71_07510 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYM71_09115 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYM71_01680 glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:lpai00910]
D GYM71_06620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYM71_00955 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D GYM71_08480 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D GYM71_07190 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lpai00061]
D GYM71_08400 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GYM71_08420 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GYM71_08410 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GYM71_08405 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GYM71_06065 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D GYM71_08445 acyl carrier protein K02078 acpP; acyl carrier protein
D GYM71_08435 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GYM71_08450 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GYM71_08425 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GYM71_03620 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYM71_08430 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYM71_08415 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GYM71_08440 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lpai00071]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_00595 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:lpai00074]
D GYM71_08070 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D GYM71_06065 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D GYM71_08445 acyl carrier protein K02078 acpP; acyl carrier protein
D GYM71_08435 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lpai00561]
D GYM71_05440 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D GYM71_05435 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D GYM71_05430 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D GYM71_04095 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GYM71_09690 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GYM71_06070 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GYM71_04940 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYM71_08805 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYM71_05890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GYM71_03165 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GYM71_02660 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D GYM71_02675 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D GYM71_04130 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:lpai00564]
D GYM71_03730 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GYM71_04100 glycerol-3-phosphate dehydrogenase/oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D GYM71_04940 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYM71_08805 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYM71_05890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GYM71_02360 tagD; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D GYM71_03165 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GYM71_02465 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D GYM71_05770 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GYM71_03630 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D GYM71_01015 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D GYM71_04190 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lpai00230]
D GYM71_04555 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GYM71_00645 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D GYM71_03740 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GYM71_01045 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYM71_08600 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GYM71_09775 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GYM71_05665 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GYM71_02705 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D GYM71_03955 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GYM71_02435 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GYM71_08250 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D GYM71_08245 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GYM71_09785 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D GYM71_06140 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GYM71_08870 AAA family ATPase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GYM71_00475 nrdJ; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent K00527 rtpR; ribonucleoside-triphosphate reductase (thioredoxin) [EC:1.17.4.2]
D GYM71_10200 deoxynucleoside kinase K25641 dgk2; deoxyguanosine kinase [EC:2.7.1.113]
D GYM71_05305 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GYM71_03570 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D GYM71_09780 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GYM71_10195 deoxynucleoside kinase K10353 E2.7.1.76; deoxyadenosine kinase [EC:2.7.1.76]
D GYM71_03960 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D GYM71_07815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GYM71_00955 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D GYM71_08480 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:lpai00240]
D GYM71_04995 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYM71_06565 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYM71_05000 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYM71_06570 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYM71_06580 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GYM71_06575 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GYM71_06600 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D GYM71_06610 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GYM71_06605 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GYM71_05785 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GYM71_08385 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GYM71_04840 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GYM71_02730 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D GYM71_04310 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYM71_06585 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYM71_00655 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D GYM71_09925 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D GYM71_00475 nrdJ; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent K00527 rtpR; ribonucleoside-triphosphate reductase (thioredoxin) [EC:1.17.4.2]
D GYM71_08695 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D GYM71_07320 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GYM71_07480 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GYM71_04290 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lpai00250]
D GYM71_01480 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D GYM71_01000 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D GYM71_09240 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GYM71_09780 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GYM71_09775 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GYM71_06580 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GYM71_01895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GYM71_06620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYM71_04995 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYM71_06565 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYM71_05000 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYM71_06570 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYM71_03920 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:lpai00260]
D GYM71_09880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYM71_09845 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GYM71_02090 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GYM71_07510 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYM71_09115 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00270 Cysteine and methionine metabolism [PATH:lpai00270]
D GYM71_09975 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GYM71_07050 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GYM71_04565 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D GYM71_02980 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D GYM71_09880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYM71_09845 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GYM71_10075 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GYM71_01750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_05370 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_08110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:lpai00280]
D GYM71_10075 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GYM71_00595 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D GYM71_00455 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_03475 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lpai00290]
D GYM71_10075 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:lpai00300]
D GYM71_09880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYM71_09845 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GYM71_01285 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GYM71_09860 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GYM71_09855 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GYM71_08940 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GYM71_09885 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GYM71_09875 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GYM71_09870 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D GYM71_02335 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D GYM71_05275 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D GYM71_09850 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D GYM71_09865 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D GYM71_01475 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYM71_08080 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lpai00310]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_01895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:lpai00220]
D GYM71_08490 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GYM71_08495 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D GYM71_06620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYM71_04995 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYM71_06565 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GYM71_05000 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYM71_06570 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GYM71_00955 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D GYM71_08480 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism [PATH:lpai00330]
D GYM71_00490 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D GYM71_01780 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D GYM71_06925 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism
D GYM71_00560 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism [PATH:lpai00350]
D GYM71_01895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GYM71_09655 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism
D GYM71_09655 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00380 Tryptophan metabolism
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
D GYM71_00635 type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D GYM71_00595 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:lpai00430]
D GYM71_03885 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GYM71_04070 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lpai00450]
D GYM71_09975 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GYM71_03735 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GYM71_08680 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lpai00460]
D GYM71_00375 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GYM71_01000 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:lpai00470]
D GYM71_08065 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GYM71_01075 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYM71_09380 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_10130 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_09370 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_10120 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_02430 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GYM71_04500 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GYM71_01480 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D GYM71_09885 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GYM71_09875 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:lpai00480]
D GYM71_01110 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GYM71_10250 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GYM71_07200 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:lpai00511]
D GYM71_04190 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D GYM71_09730 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
D GYM71_01280 SIS domain-containing protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
C 00542 O-Antigen repeat unit biosynthesis [PATH:lpai00542]
D GYM71_03680 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lpai00541]
D GYM71_03460 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GYM71_02005 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GYM71_04105 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D GYM71_08650 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GYM71_03435 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lpai00550]
D GYM71_08380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYM71_03900 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYM71_06850 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GYM71_04500 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GYM71_01475 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYM71_01075 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYM71_08080 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GYM71_05775 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GYM71_07030 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYM71_04495 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYM71_04505 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GYM71_05055 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GYM71_06915 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D GYM71_04490 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D GYM71_06660 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A
D GYM71_06985 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYM71_04285 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D GYM71_09700 cobalamin biosynthesis protein CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:lpai00552]
D GYM71_07030 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYM71_03680 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D GYM71_02365 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D GYM71_03940 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D GYM71_09380 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_10130 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_09370 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_10120 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_09375 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYM71_10125 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYM71_09365 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D GYM71_10115 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D GYM71_08810 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D GYM71_08930 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D GYM71_02675 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D GYM71_04130 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D GYM71_02660 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D GYM71_02665 glycosyltransferase family 4 protein K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D GYM71_03680 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:lpai00543]
D GYM71_03680 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D GYM71_07695 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lpai00730]
D GYM71_09695 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D GYM71_09745 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D GYM71_04420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_04570 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_04425 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GYM71_00445 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GYM71_09740 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D GYM71_09750 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D GYM71_06105 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GYM71_08200 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GYM71_07815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GYM71_09735 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:lpai00740]
D GYM71_01510 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GYM71_01500 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GYM71_01515 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GYM71_01505 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GYM71_05715 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D GYM71_01380 NAD(P)H-dependent oxidoreductase K22393 nfr1; flavin reductase (NADH) subunit 1 [EC:1.5.1.36]
D GYM71_01385 NAD(P)H-dependent oxidoreductase K22394 nfr2; flavin reductase (NADH) subunit 2 [EC:1.5.1.36]
D GYM71_02010 NADPH-dependent oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D GYM71_09740 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D GYM71_04555 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:lpai00760]
D GYM71_02375 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D GYM71_06735 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D GYM71_02380 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D GYM71_00995 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D GYM71_03575 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GYM71_01895 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:lpai00770]
D GYM71_01205 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D GYM71_04660 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GYM71_06815 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GYM71_08070 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D GYM71_10075 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:lpai00780]
D GYM71_08425 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GYM71_03620 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYM71_08430 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYM71_08415 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GYM71_08460 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:lpai00790]
D GYM71_05485 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GYM71_04435 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D GYM71_01510 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
C 00670 One carbon pool by folate [PATH:lpai00670]
D GYM71_05485 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GYM71_05015 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GYM71_06180 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GYM71_06125 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GYM71_06650 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lpai00860]
D GYM71_00460 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lpai00130]
D GYM71_07035 flavodoxin family protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D GYM71_04825 NAD(P)H-binding protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lpai00900]
D GYM71_00445 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_03475 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D GYM71_03470 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D GYM71_05095 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D GYM71_05105 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D GYM71_05100 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D GYM71_05110 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D GYM71_06165 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GYM71_05775 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D GYM71_08305 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:lpai01054]
D GYM71_01480 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:lpai00946]
D GYM71_00375 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D GYM71_02085 alpha-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
D GYM71_04160 family 78 glycoside hydrolase catalytic domain K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:lpai00311]
D GYM71_03180 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D GYM71_01870 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:lpai00261]
D GYM71_09880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GYM71_09845 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GYM71_01285 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GYM71_09860 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GYM71_09855 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D GYM71_03740 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D GYM71_08435 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GYM71_03620 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYM71_08430 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GYM71_06065 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D GYM71_08445 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:lpai00999]
D GYM71_07050 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GYM71_00375 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lpai00362]
D GYM71_00415 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D GYM71_05530 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D GYM71_09065 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D GYM71_06695 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
D GYM71_09655 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00622 Xylene degradation [PATH:lpai00622]
D GYM71_09655 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lpai03020]
D GYM71_07955 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYM71_07950 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYM71_07790 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYM71_06135 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYM71_08390 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lpai03010]
D GYM71_04845 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GYM71_05880 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GYM71_07890 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GYM71_04410 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GYM71_07835 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GYM71_00035 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GYM71_07935 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GYM71_07850 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GYM71_07755 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GYM71_07925 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GYM71_07795 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GYM71_07940 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GYM71_07800 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GYM71_07855 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GYM71_04690 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GYM71_05960 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GYM71_07875 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GYM71_00045 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GYM71_07900 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GYM71_04685 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GYM71_05250 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GYM71_07415 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GYM71_07905 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GYM71_07920 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GYM71_07915 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GYM71_07860 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GYM71_07845 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GYM71_07375 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GYM71_00065 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GYM71_07380 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GYM71_07420 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GYM71_07760 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GYM71_07870 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GYM71_07825 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GYM71_07885 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GYM71_07785 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GYM71_07840 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GYM71_05945 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GYM71_06750 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GYM71_06210 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GYM71_07895 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GYM71_07910 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GYM71_07865 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GYM71_06205 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GYM71_06090 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GYM71_07880 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GYM71_07830 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GYM71_08085 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GYM71_04755 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GYM71_06655 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYM71_07435 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYM71_10280 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GYM71_06755 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GYM71_07805 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GYM71_00535 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_01940 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_02505 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_07175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_00540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_01955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_02510 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_07160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_01960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_02515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_07155 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_00545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lpai00970]
D GYM71_01950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYM71_07165 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYM71_02550 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYM71_06230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYM71_03360 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYM71_00550 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYM71_01965 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYM71_07150 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYM71_02575 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYM71_02620 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYM71_02650 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GYM71_02330 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYM71_02645 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYM71_02345 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYM71_04265 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYM71_02605 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYM71_07060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYM71_04260 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYM71_08710 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYM71_02540 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYM71_07975 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYM71_02585 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYM71_02640 tRNA-His K14226 tRNA-His; tRNA His
D GYM71_01945 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYM71_02590 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYM71_07170 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYM71_07005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_03125 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_02545 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_02530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_02655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_02525 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYM71_00785 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYM71_00790 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYM71_02560 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYM71_02565 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GYM71_02570 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYM71_02615 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYM71_02580 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYM71_02625 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYM71_07970 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYM71_02555 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYM71_05570 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYM71_02610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYM71_02595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYM71_07145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYM71_02535 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYM71_00100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYM71_08780 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYM71_02015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYM71_02635 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GYM71_02340 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYM71_02630 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYM71_02520 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYM71_07055 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYM71_07080 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYM71_07085 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYM71_07470 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYM71_03155 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GYM71_03160 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GYM71_03150 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GYM71_02390 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYM71_05290 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYM71_05070 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYM71_05220 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GYM71_05215 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GYM71_06795 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYM71_01935 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYM71_07460 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYM71_08680 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYM71_06125 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GYM71_04430 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYM71_07025 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYM71_04545 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYM71_07985 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYM71_06970 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GYM71_05760 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYM71_05295 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GYM71_06680 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYM71_06675 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GYM71_08795 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GYM71_08700 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lpai03060]
D GYM71_07820 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GYM71_07430 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GYM71_02680 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GYM71_07205 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GYM71_06700 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYM71_10270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYM71_03705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYM71_05965 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYM71_07345 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D GYM71_06000 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYM71_05135 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYM71_05140 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYM71_05010 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lpai04122]
D GYM71_04420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_04570 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_04580 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GYM71_04425 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lpai03018]
D GYM71_05615 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYM71_02685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GYM71_08075 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYM71_03660 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GYM71_04625 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYM71_04695 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYM71_01835 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYM71_04775 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYM71_05700 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GYM71_07250 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lpai03030]
D GYM71_01805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_03895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_04770 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYM71_05755 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYM71_07340 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYM71_07310 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYM71_04680 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYM71_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYM71_00070 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GYM71_05210 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GYM71_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYM71_01025 ribonuclease K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GYM71_04900 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GYM71_06825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYM71_03140 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lpai03410]
D GYM71_05060 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GYM71_03880 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GYM71_00980 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D GYM71_06820 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GYM71_09255 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D GYM71_00520 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GYM71_06825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYM71_05670 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GYM71_03140 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lpai03420]
D GYM71_08035 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GYM71_03750 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GYM71_10085 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D GYM71_03745 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GYM71_04725 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GYM71_01195 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYM71_03135 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYM71_06825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYM71_03140 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lpai03430]
D GYM71_07225 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GYM71_02410 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D GYM71_07220 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GYM71_01195 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYM71_03135 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYM71_06175 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GYM71_06170 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GYM71_05670 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GYM71_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYM71_04770 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYM71_05755 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYM71_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYM71_07340 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYM71_04680 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYM71_07310 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYM71_01805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_03895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_03140 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lpai03440]
D GYM71_05670 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GYM71_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYM71_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GYM71_05225 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GYM71_07330 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GYM71_03655 recA; recombinase RecA K03553 recA; recombination protein RecA
D GYM71_06825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYM71_07215 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GYM71_07210 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GYM71_06075 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GYM71_04595 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GYM71_04770 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYM71_05755 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYM71_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYM71_07340 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYM71_04680 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYM71_07310 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYM71_01805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_03895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_06130 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lpai02010]
D GYM71_01455 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D GYM71_03645 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D GYM71_03640 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D GYM71_03650 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D GYM71_01460 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GYM71_03635 betaine/proline/choline family ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GYM71_01820 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYM71_09630 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYM71_09625 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D GYM71_09620 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYM71_09615 ABC transporter permease subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYM71_08760 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D GYM71_08765 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D GYM71_08750 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D GYM71_08745 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D GYM71_08755 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D GYM71_07410 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYM71_07405 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GYM71_07400 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GYM71_07390 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYM71_07395 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYM71_09300 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GYM71_09305 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GYM71_09285 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D GYM71_09290 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D GYM71_09295 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D GYM71_02990 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GYM71_06785 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GYM71_02995 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYM71_03000 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYM71_06775 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYM71_06780 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYM71_02985 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYM71_06790 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYM71_08950 ABC transporter substrate-binding protein/permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D GYM71_08945 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D GYM71_00975 ABC transporter substrate-binding protein/permease K17073 lysX1; putative lysine transport system substrate-binding protein
D GYM71_00970 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D GYM71_01150 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYM71_01175 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYM71_01155 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GYM71_05590 hypothetical protein K01997 livH; branched-chain amino acid transport system permease protein
D GYM71_01160 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GYM71_01165 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYM71_01170 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYM71_05475 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GYM71_05465 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D GYM71_05470 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GYM71_03015 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GYM71_03020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GYM71_03025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D GYM71_03030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D GYM71_03035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D GYM71_03040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D GYM71_00850 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYM71_07770 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYM71_07780 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYM71_07775 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYM71_08175 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D GYM71_08180 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D GYM71_03815 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D GYM71_03820 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D GYM71_03810 lantibiotic protection ABC transporter ATP-binding subunit K20490 nisF; lantibiotic transport system ATP-binding protein
D GYM71_05910 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_05905 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_03110 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D GYM71_09395 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D GYM71_08000 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_01445 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_01450 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_01885 ABC-F family ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:lpai02060]
D GYM71_03540 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GYM71_03535 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D GYM71_09510 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYM71_03325 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D GYM71_00380 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_00840 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_08610 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_00095 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_00365 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_02145 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_02960 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_04215 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_04245 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_04280 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_05985 PTS beta-glucoside transporter subunit IIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_06840 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_08050 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_09565 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_00500 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYM71_09525 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYM71_02855 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_09725 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_10305 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_02850 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_04235 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_09710 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_10300 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_00315 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_02870 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_03355 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_04225 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_07065 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_07600 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_08630 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_09715 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_10095 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_10295 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_01230 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_01710 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_02210 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_02830 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_08535 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_09805 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_10015 PTS N-acetylglucosamine transporter subunit IIBC K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_01970 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GYM71_00730 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01240 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01975 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_02200 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_08355 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_09815 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_10025 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01245 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_01725 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_01980 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_02205 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_08350 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_09810 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_10020 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_02110 hypothetical protein K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02250 PTS sugar transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02290 hypothetical protein K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02770 hypothetical protein K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_08575 hypothetical protein K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02255 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_02775 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_02805 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_08570 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_01715 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_02295 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_02260 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_02780 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_02810 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_08565 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_02300 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_08525 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_01720 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_02265 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_02305 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_02785 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_02815 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_08520 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_08560 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_01620 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D GYM71_01605 agaB; PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D GYM71_01610 agaC; PTS N-acetylgalactosamine transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component
D GYM71_01615 agaD; PTS N-acetylgalactosamine transporter subunit IID K10986 agaD; galactosamine PTS system EIID component
D GYM71_03595 PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GYM71_01525 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_01575 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_02165 PTS transporter subunit EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_08845 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_09465 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_10050 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_01535 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_01580 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_08835 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_09470 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_10055 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_00280 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_01530 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_01585 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_08840 PTS sugar transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_09475 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_10060 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_02170 PTS fructose transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D GYM71_02175 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component
D GYM71_01310 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GYM71_01265 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_01320 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_08315 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_01270 PTS transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_01315 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_08310 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_02915 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_07675 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_09000 PTS transporter subunit EIIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_02910 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GYM71_07680 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GYM71_02905 PTS transporter subunit EIIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GYM71_07685 PTS transporter subunit EIIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GYM71_09005 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:lpai03070]
D GYM71_07430 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GYM71_02680 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GYM71_07820 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GYM71_07205 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GYM71_06700 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYM71_10270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYM71_03705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYM71_06000 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYM71_05965 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lpai02020]
D GYM71_07410 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYM71_00820 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GYM71_00800 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYM71_00795 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D GYM71_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GYM71_09380 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_10130 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_09375 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYM71_10125 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYM71_09370 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_10120 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_09365 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D GYM71_10115 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D GYM71_06705 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D GYM71_06710 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D GYM71_03810 lantibiotic protection ABC transporter ATP-binding subunit K20490 nisF; lantibiotic transport system ATP-binding protein
D GYM71_03815 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D GYM71_03820 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D GYM71_05350 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D GYM71_05345 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D GYM71_05340 citE; citrate (pro-3S)-lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D GYM71_05335 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D GYM71_05330 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D GYM71_00565 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D GYM71_02125 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D GYM71_02130 sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D GYM71_08995 sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D GYM71_08990 response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D GYM71_08985 CidA/LrgA family protein K05338 lrgA; holin-like protein
D GYM71_08980 antiholin LrgB K05339 lrgB; holin-like protein LrgB
D GYM71_06620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_01740 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GYM71_03435 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lpai02024]
D GYM71_01150 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYM71_01175 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYM71_01155 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GYM71_05590 hypothetical protein K01997 livH; branched-chain amino acid transport system permease protein
D GYM71_01160 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GYM71_01165 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYM71_01170 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYM71_01500 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GYM71_03015 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GYM71_03020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GYM71_03025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D GYM71_03030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D GYM71_03035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D GYM71_03040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D GYM71_06015 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06020 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06025 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06030 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06035 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06040 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06930 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06050 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GYM71_06045 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GYM71_06060 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GYM71_06055 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GYM71_02225 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D GYM71_06700 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYM71_10270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYM71_07430 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GYM71_02680 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GYM71_07820 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GYM71_07205 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GYM71_03705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYM71_06000 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYM71_05965 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYM71_03810 lantibiotic protection ABC transporter ATP-binding subunit K20490 nisF; lantibiotic transport system ATP-binding protein
D GYM71_03815 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D GYM71_03820 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lpai02040]
D GYM71_05205 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GYM71_01740 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GYM71_05615 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D GYM71_00460 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lpai01501]
D GYM71_04165 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GYM71_03015 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GYM71_03020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GYM71_03025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D GYM71_03030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D GYM71_03035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D GYM71_03040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D GYM71_01870 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D GYM71_03110 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D GYM71_09395 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D GYM71_05055 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GYM71_06915 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:lpai01502]
D GYM71_01075 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYM71_08065 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GYM71_08080 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GYM71_04495 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYM71_04505 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lpai01503]
D GYM71_00820 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GYM71_09380 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_10130 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_09375 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYM71_10125 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYM71_09370 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_10120 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_09365 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D GYM71_10115 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lpai01000]
C 01001 Protein kinases [BR:lpai01001]
D GYM71_06110 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D GYM71_00800 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYM71_06705 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D GYM71_02130 sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D GYM71_08995 sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lpai01009]
D GYM71_04775 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYM71_06115 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lpai01002]
D GYM71_05010 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GYM71_07490 pepC; aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D GYM71_08735 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D GYM71_07230 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D GYM71_08245 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GYM71_09915 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D GYM71_08855 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GYM71_03920 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GYM71_09240 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D GYM71_07540 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D GYM71_03180 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D GYM71_09575 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D GYM71_05995 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D GYM71_08290 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D GYM71_01930 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D GYM71_10160 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D GYM71_08715 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D GYM71_01110 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GYM71_08935 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D GYM71_00245 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D GYM71_09200 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D GYM71_08940 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GYM71_05180 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D GYM71_09865 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D GYM71_03450 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GYM71_06200 M24 family metallopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GYM71_08010 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GYM71_00865 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D GYM71_05765 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GYM71_09600 S58 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D GYM71_00820 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GYM71_06985 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYM71_03775 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GYM71_06555 Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D GYM71_04665 PDZ domain-containing protein K07177 K07177; Lon-like protease
D GYM71_05925 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYM71_06505 helix-turn-helix domain-containing protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYM71_05135 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYM71_05140 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GYM71_01780 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D GYM71_06925 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D GYM71_06645 rhomboid family intramembrane serine protease K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D GYM71_04925 hslV; HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
C 01003 Glycosyltransferases [BR:lpai01003]
D GYM71_02660 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D GYM71_02665 glycosyltransferase family 4 protein K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D GYM71_05055 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GYM71_06915 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D GYM71_02365 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D GYM71_03940 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D GYM71_03680 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D GYM71_07695 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lpai01005]
D GYM71_01280 SIS domain-containing protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GYM71_03680 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpai01011]
D GYM71_08380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GYM71_03900 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GYM71_06850 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GYM71_04500 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GYM71_01475 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GYM71_01075 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GYM71_08065 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GYM71_02430 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GYM71_04495 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GYM71_04505 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GYM71_07030 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GYM71_05055 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GYM71_06915 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D GYM71_04490 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D GYM71_06660 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A
D GYM71_06985 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GYM71_08855 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D GYM71_09575 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
C 01004 Lipid biosynthesis proteins [BR:lpai01004]
D GYM71_08435 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GYM71_08450 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GYM71_08425 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GYM71_03620 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYM71_08430 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GYM71_08415 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GYM71_08440 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D GYM71_00610 acyl--CoA ligase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D GYM71_06070 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GYM71_04940 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYM71_08805 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GYM71_05890 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lpai01008]
D GYM71_01480 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:lpai01006]
D GYM71_06165 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D GYM71_05775 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GYM71_06630 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:lpai01007]
D GYM71_07470 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYM71_08795 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GYM71_08700 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GYM71_07460 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYM71_06970 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GYM71_08680 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYM71_04545 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYM71_04430 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYM71_07025 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYM71_07985 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYM71_05290 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYM71_05070 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYM71_05295 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GYM71_05220 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GYM71_05215 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GYM71_01935 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYM71_05760 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYM71_06795 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYM71_02390 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYM71_06680 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYM71_06675 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GYM71_02335 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D GYM71_05275 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D GYM71_09850 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D GYM71_09975 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D GYM71_10075 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lpai00194]
D GYM71_04350 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GYM71_04345 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GYM71_04340 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GYM71_04335 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GYM71_04330 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GYM71_04325 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GYM71_04320 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GYM71_04315 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lpai03000]
D GYM71_04090 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D GYM71_02150 DeoR/GlpR transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D GYM71_10045 DeoR/GlpR transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D GYM71_06835 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D GYM71_09010 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D GYM71_09485 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D GYM71_02950 DeoR/GlpR transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D GYM71_01630 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYM71_01650 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYM71_02460 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYM71_09705 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D GYM71_00275 substrate-binding domain-containing protein K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D GYM71_00830 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D GYM71_08160 substrate-binding domain-containing protein K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D GYM71_00505 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D GYM71_07610 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D GYM71_03065 GntR family transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D GYM71_00750 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYM71_01600 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYM71_02185 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYM71_02355 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYM71_02765 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYM71_08300 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYM71_08540 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYM71_08550 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D GYM71_02280 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D GYM71_02315 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D GYM71_08545 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D GYM71_09020 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D GYM71_00435 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D GYM71_03790 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D GYM71_07730 winged helix-turn-helix transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D GYM71_00770 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D GYM71_07725 helix-turn-helix transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D GYM71_08460 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D GYM71_08655 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D GYM71_02245 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D GYM71_08360 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D GYM71_09825 PRD domain-containing protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D GYM71_07260 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D GYM71_08285 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D GYM71_08060 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D GYM71_09570 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D GYM71_01555 PRD domain-containing protein K03491 licR; probable licABCH operon transcriptional regulator
D GYM71_07660 BglG family transcription antiterminator K03491 licR; probable licABCH operon transcriptional regulator
D GYM71_00935 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D GYM71_01415 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYM71_01425 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYM71_05710 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D GYM71_09735 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D GYM71_03830 hypothetical protein K05311 cggR; central glycolytic genes regulator
D GYM71_00650 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D GYM71_06585 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D GYM71_06810 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D GYM71_04475 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lpai03021]
D GYM71_07790 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYM71_07955 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYM71_07950 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYM71_08390 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D GYM71_06135 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYM71_05205 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GYM71_07445 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D GYM71_01740 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GYM71_05745 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GYM71_06185 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GYM71_07425 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GYM71_06670 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GYM71_08725 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:lpai03019]
D GYM71_06010 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYM71_04625 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYM71_04695 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYM71_01835 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D GYM71_03660 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D GYM71_02685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GYM71_06895 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D GYM71_08075 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYM71_07185 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D GYM71_05615 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYM71_04775 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D GYM71_05700 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GYM71_07250 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYM71_03760 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:lpai03011]
D GYM71_04845 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GYM71_05880 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GYM71_07890 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GYM71_04410 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GYM71_07835 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GYM71_00035 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GYM71_07935 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GYM71_07850 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GYM71_07755 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GYM71_07925 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GYM71_07795 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GYM71_07940 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GYM71_07800 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GYM71_07855 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GYM71_04690 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GYM71_05960 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GYM71_07875 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GYM71_00045 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GYM71_07900 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GYM71_04685 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GYM71_05250 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GYM71_07415 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GYM71_07905 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GYM71_07920 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GYM71_07915 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GYM71_07860 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GYM71_07845 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GYM71_00065 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GYM71_07380 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GYM71_07420 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GYM71_07375 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GYM71_07760 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GYM71_07870 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GYM71_07825 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GYM71_07885 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GYM71_07785 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GYM71_07840 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GYM71_05945 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GYM71_06750 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GYM71_06210 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GYM71_07895 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GYM71_07910 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GYM71_07865 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GYM71_06205 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GYM71_06090 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GYM71_07880 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GYM71_07830 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GYM71_08085 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GYM71_04755 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GYM71_06655 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYM71_07435 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GYM71_10280 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GYM71_06755 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GYM71_07805 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GYM71_01960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_02515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_07155 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_00545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_00535 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_01940 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_02505 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_07175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_00540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_01955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_02510 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_07160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lpai03009]
D GYM71_06010 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYM71_05230 GTPase Era K03595 era; GTPase
D GYM71_04730 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D GYM71_05745 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GYM71_06185 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GYM71_07425 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GYM71_08665 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D GYM71_06120 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GYM71_04655 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GYM71_01410 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GYM71_04480 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GYM71_07300 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GYM71_06160 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D GYM71_07450 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GYM71_00825 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GYM71_03190 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GYM71_04810 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GYM71_03580 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYM71_05005 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYM71_06920 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GYM71_07280 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GYM71_09930 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GYM71_02000 GNAT family N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D GYM71_05955 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D GYM71_05315 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D GYM71_02400 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GYM71_07455 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D GYM71_08075 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D GYM71_07185 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D GYM71_06105 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GYM71_08200 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GYM71_04850 ribosome biogenesis GTPase Der K03977 engA; GTPase
D GYM71_04895 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D GYM71_08850 hflX; GTPase HflX K03665 hflX; GTPase
D GYM71_06740 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D GYM71_04305 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GYM71_05305 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GYM71_05725 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D GYM71_05750 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D GYM71_00015 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D GYM71_06725 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D GYM71_05235 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D GYM71_03700 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D GYM71_01435 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D GYM71_06715 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lpai03016]
D GYM71_04740 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D GYM71_04875 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D GYM71_05760 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GYM71_04545 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GYM71_07025 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYM71_08680 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GYM71_06970 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GYM71_07985 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GYM71_05290 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYM71_02390 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GYM71_05070 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D GYM71_06795 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GYM71_01935 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GYM71_07460 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GYM71_04430 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GYM71_05295 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GYM71_06680 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GYM71_06675 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GYM71_08795 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GYM71_08700 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GYM71_05300 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D GYM71_06880 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYM71_06865 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D GYM71_07765 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GYM71_05720 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GYM71_04420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_04570 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_04305 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GYM71_06630 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GYM71_10265 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GYM71_10260 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GYM71_10275 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GYM71_05035 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D GYM71_05220 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GYM71_05215 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GYM71_07470 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D GYM71_05320 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D GYM71_03310 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D GYM71_07350 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D GYM71_07990 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D GYM71_04915 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D GYM71_05950 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GYM71_05190 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D GYM71_03605 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D GYM71_06690 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D GYM71_04580 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GYM71_04425 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D GYM71_08015 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D GYM71_07285 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D GYM71_07275 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GYM71_03890 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GYM71_06720 nucleotidyltransferase K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D GYM71_02685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:lpai03012]
D GYM71_05730 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GYM71_06760 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GYM71_07265 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GYM71_05875 elongation factor Ts K02357 tsf; elongation factor Ts
D GYM71_04705 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GYM71_07930 fusA; elongation factor G K02355 fusA; elongation factor G
D GYM71_04295 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GYM71_05780 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D GYM71_04300 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GYM71_08040 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GYM71_07810 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D GYM71_01215 efp; elongation factor P K02356 efp; elongation factor P
D GYM71_06195 efp; elongation factor P K02356 efp; elongation factor P
D GYM71_03710 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D GYM71_03515 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lpai03110]
D GYM71_07960 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D GYM71_03525 AAA domain-containing protein K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D GYM71_10080 ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D GYM71_04715 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GYM71_04930 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D GYM71_05700 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GYM71_07250 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYM71_05695 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GYM71_08005 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D GYM71_05705 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GYM71_08730 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D GYM71_07255 co-chaperone GroES K04078 groES; chaperonin GroES
D GYM71_00820 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D GYM71_08010 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GYM71_04315 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GYM71_06890 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D GYM71_02415 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:lpai04131]
D GYM71_03835 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYM71_06995 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYM71_07510 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYM71_09115 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYM71_04780 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lpai03032]
D GYM71_01025 ribonuclease K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GYM71_04855 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYM71_05460 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYM71_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GYM71_00070 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GYM71_05210 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GYM71_06805 chromosome replication initiation protein K03346 dnaB; replication initiation and membrane attachment protein
D GYM71_06800 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D GYM71_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYM71_04770 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYM71_05755 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYM71_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYM71_04680 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYM71_07310 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYM71_01805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_03895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_07340 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYM71_04900 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GYM71_06825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYM71_03140 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GYM71_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GYM71_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GYM71_04950 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GYM71_04945 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GYM71_04910 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lpai03036]
D GYM71_06010 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GYM71_04855 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYM71_05460 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYM71_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GYM71_02880 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D GYM71_06005 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D GYM71_04800 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D GYM71_04805 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D GYM71_04515 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GYM71_08025 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D GYM71_03615 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GYM71_04485 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D GYM71_04510 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D GYM71_04645 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D GYM71_04520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYM71_04415 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D GYM71_04540 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D GYM71_04525 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D GYM71_04360 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYM71_04450 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYM71_04455 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D GYM71_04460 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D GYM71_04375 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D GYM71_01420 ParA family protein K03496 parA; chromosome partitioning protein
D GYM71_01415 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYM71_01425 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYM71_04950 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GYM71_04945 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GYM71_10260 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GYM71_01410 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GYM71_04915 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D GYM71_04920 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D GYM71_04790 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D GYM71_04720 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D GYM71_03770 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lpai03400]
D GYM71_08770 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D GYM71_03880 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GYM71_00980 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D GYM71_05060 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GYM71_05200 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GYM71_07480 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GYM71_09255 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D GYM71_06820 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GYM71_00520 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GYM71_05670 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GYM71_03140 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GYM71_06825 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GYM71_03750 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GYM71_10085 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D GYM71_03745 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D GYM71_04725 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GYM71_01195 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYM71_03135 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GYM71_07955 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GYM71_07950 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GYM71_07790 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GYM71_08390 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D GYM71_06135 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GYM71_08035 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GYM71_07225 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GYM71_02410 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D GYM71_07220 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GYM71_06175 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GYM71_06170 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GYM71_04770 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GYM71_05755 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D GYM71_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GYM71_04680 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GYM71_07310 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GYM71_01805 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_03895 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GYM71_07340 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GYM71_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYM71_04595 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GYM71_03655 recA; recombinase RecA K03553 recA; recombination protein RecA
D GYM71_07215 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GYM71_07210 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GYM71_06130 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GYM71_07475 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D GYM71_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D GYM71_06075 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GYM71_05225 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GYM71_07330 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GYM71_06155 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GYM71_05050 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D GYM71_05085 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D GYM71_05090 ATP-dependent helicase K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D GYM71_01760 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GYM71_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GYM71_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GYM71_04910 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GYM71_04855 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYM71_05460 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GYM71_07195 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GYM71_08720 nucleotidyltransferase K03502 umuC; DNA polymerase V
D GYM71_05925 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYM71_06505 helix-turn-helix domain-containing protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D GYM71_03495 recX; recombination regulator RecX K03565 recX; regulatory protein
D GYM71_05080 DEAD/DEAH box helicase family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GYM71_07190 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lpai03029]
D GYM71_05730 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GYM71_06760 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GYM71_05875 elongation factor Ts K02357 tsf; elongation factor Ts
D GYM71_04705 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GYM71_07930 fusA; elongation factor G K02355 fusA; elongation factor G
D GYM71_05230 GTPase Era K03595 era; GTPase
D GYM71_08795 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GYM71_07025 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GYM71_05290 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GYM71_06970 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GYM71_03155 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GYM71_03160 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GYM71_03150 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GYM71_00040 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GYM71_05700 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GYM71_05705 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GYM71_07250 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYM71_07255 co-chaperone GroES K04078 groES; chaperonin GroES
D GYM71_05695 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GYM71_04420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_04570 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_06700 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYM71_10270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lpai02000]
D GYM71_05910 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_05905 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_03110 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D GYM71_09395 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D GYM71_01445 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_01450 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_08000 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D GYM71_01885 ABC-F family ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
D GYM71_01455 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D GYM71_03645 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D GYM71_03640 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D GYM71_03650 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D GYM71_01460 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GYM71_03635 betaine/proline/choline family ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D GYM71_01820 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYM71_09630 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D GYM71_09625 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D GYM71_09620 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYM71_09615 ABC transporter permease subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D GYM71_08760 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D GYM71_08765 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D GYM71_08750 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D GYM71_08745 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D GYM71_08755 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D GYM71_01840 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D GYM71_01860 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D GYM71_01825 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D GYM71_01830 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D GYM71_07410 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D GYM71_07405 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GYM71_07400 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GYM71_07390 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYM71_07395 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GYM71_09300 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GYM71_09305 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D GYM71_09285 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D GYM71_09290 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D GYM71_09295 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D GYM71_02990 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GYM71_06785 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D GYM71_02995 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYM71_03000 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYM71_06775 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYM71_06780 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D GYM71_02985 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYM71_06790 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D GYM71_08950 ABC transporter substrate-binding protein/permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D GYM71_08945 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D GYM71_01150 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYM71_01175 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D GYM71_01155 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D GYM71_05590 hypothetical protein K01997 livH; branched-chain amino acid transport system permease protein
D GYM71_01160 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D GYM71_01165 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D GYM71_01170 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D GYM71_05475 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D GYM71_05465 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D GYM71_05470 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D GYM71_01695 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D GYM71_01700 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D GYM71_01690 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D GYM71_01685 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D GYM71_00975 ABC transporter substrate-binding protein/permease K17073 lysX1; putative lysine transport system substrate-binding protein
D GYM71_00970 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D GYM71_08090 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GYM71_10215 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GYM71_08100 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D GYM71_08105 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D GYM71_10205 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D GYM71_08095 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D GYM71_10210 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D GYM71_03015 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GYM71_03020 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D GYM71_03025 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D GYM71_03030 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D GYM71_03035 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D GYM71_03040 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D GYM71_06015 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06020 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06025 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06030 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06035 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06040 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06930 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D GYM71_06050 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D GYM71_06045 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D GYM71_06060 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D GYM71_06055 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D GYM71_00465 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component
D GYM71_00850 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYM71_07770 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D GYM71_07780 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYM71_07775 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYM71_00855 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D GYM71_02715 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein
D GYM71_05635 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D GYM71_08960 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D GYM71_05640 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D GYM71_08965 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D GYM71_08175 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D GYM71_08180 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D GYM71_03815 hypothetical protein K20491 nisE; lantibiotic transport system permease protein
D GYM71_03820 lantibiotic immunity ABC transporter MutG family permease subunit K20492 nisG; lantibiotic transport system permease protein
D GYM71_03810 lantibiotic protection ABC transporter ATP-binding subunit K20490 nisF; lantibiotic transport system ATP-binding protein
D GYM71_00410 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D GYM71_00405 antibiotic ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein
D GYM71_00400 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D GYM71_06870 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D GYM71_06875 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D GYM71_00680 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_00685 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_03055 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_03980 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_03985 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_04610 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_05575 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_07555 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_09210 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_09215 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D GYM71_00690 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_03060 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_03990 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_04605 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_05155 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_05165 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_05580 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_05680 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_07560 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_07575 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_09220 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_09270 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_09665 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GYM71_01140 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GYM71_01145 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D GYM71_01360 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D GYM71_03995 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D GYM71_07745 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D GYM71_10170 ABC transporter ATP-binding protein/permease K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYM71_01135 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYM71_01365 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYM71_04000 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYM71_06765 putative bacteriocin export ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYM71_07740 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D GYM71_05645 MFS transporter K06610 iolF; MFS transporter, SP family, inositol transporter
D GYM71_03380 MHS family MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D GYM71_00620 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D GYM71_08645 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D GYM71_09540 multidrug efflux MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D GYM71_10240 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D GYM71_03540 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GYM71_03535 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D GYM71_09510 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D GYM71_03325 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D GYM71_00380 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_00840 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_08610 PTS transporter subunit EIIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D GYM71_00095 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_00365 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_02145 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_02960 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_04215 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_04245 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_04280 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_05985 PTS beta-glucoside transporter subunit IIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_06840 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_08050 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_09565 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D GYM71_00500 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYM71_09525 PTS transporter subunit EIIC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D GYM71_02905 PTS transporter subunit EIIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GYM71_07685 PTS transporter subunit EIIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D GYM71_02915 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_07675 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_09000 PTS transporter subunit EIIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D GYM71_02910 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GYM71_07680 PTS fructose transporter subunit IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D GYM71_02855 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_09725 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_10305 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D GYM71_02850 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_04235 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_09710 PTS sugar transporter K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_10300 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D GYM71_00315 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_02870 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_03355 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_04225 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_07065 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_07600 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_08630 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_09715 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_10095 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_10295 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D GYM71_03595 PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D GYM71_01525 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_01575 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_02165 PTS transporter subunit EIIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_08845 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_09465 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_10050 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D GYM71_01535 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_01580 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_08835 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_09470 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_10055 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D GYM71_00280 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_01530 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_01585 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_08840 PTS sugar transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_09475 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_10060 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D GYM71_02170 PTS fructose transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D GYM71_02175 PTS glucitol transporter subunit IIA K20114 gatC; galactose PTS system EIIC component
D GYM71_01970 manX; PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D GYM71_01230 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_01710 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_02210 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_02830 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_08535 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_09805 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_10015 PTS N-acetylglucosamine transporter subunit IIBC K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GYM71_00730 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01240 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01975 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_02200 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_08355 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_09815 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_10025 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D GYM71_01245 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_01725 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_01980 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_02205 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_08350 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_09810 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_10020 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D GYM71_02110 hypothetical protein K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02250 PTS sugar transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02290 hypothetical protein K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02770 hypothetical protein K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_08575 hypothetical protein K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D GYM71_02255 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_02775 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_02805 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_08570 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_01715 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_02295 PTS sugar transporter subunit IIB K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D GYM71_02260 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_02780 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_02810 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_08565 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_02300 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_08525 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_01720 PTS sugar transporter subunit IIC K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D GYM71_02265 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_02305 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_02785 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_02815 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_08520 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_08560 PTS system mannose/fructose/sorbose family transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D GYM71_01620 PTS sugar transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D GYM71_01605 agaB; PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-]
D GYM71_01610 agaC; PTS N-acetylgalactosamine transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component
D GYM71_01615 agaD; PTS N-acetylgalactosamine transporter subunit IID K10986 agaD; galactosamine PTS system EIID component
D GYM71_01310 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D GYM71_01265 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_01320 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_08315 PTS sugar transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D GYM71_01270 PTS transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_01315 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_08310 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D GYM71_05430 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D GYM71_05425 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D GYM71_02420 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D GYM71_02440 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D GYM71_03510 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYM71_02700 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYM71_08985 CidA/LrgA family protein K05338 lrgA; holin-like protein
D GYM71_03420 MFS transporter K16210 togT; oligogalacturonide transporter
D GYM71_08485 arcD; arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D GYM71_07520 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D GYM71_05605 L-lactate permease K03303 lutP; lactate permease
D GYM71_05500 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D GYM71_08255 purine permease K16169 pbuX; xanthine permease
D GYM71_10225 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GYM71_10235 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GYM71_00660 NupC/NupG family nucleoside CNT transporter K11535 nupC; nucleoside transport protein
D GYM71_02970 hypothetical protein K11535 nupC; nucleoside transport protein
D GYM71_10245 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D GYM71_04025 anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D GYM71_01920 AEC family transporter K24180 mleP; malate permease and related proteins
D GYM71_02115 AEC family transporter K24180 mleP; malate permease and related proteins
D GYM71_09190 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D GYM71_05520 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D GYM71_05515 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D GYM71_04815 ECF transporter S component K23675 fmnP; riboflavin transporter
D GYM71_04645 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D GYM71_05845 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D GYM71_05840 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D GYM71_05495 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D GYM71_00080 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:lpai02044]
D GYM71_04530 YggT family protein K02221 yggT; YggT family protein
D GYM71_04670 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D GYM71_08695 competence protein ComE K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D GYM71_04675 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D GYM71_03690 DEAD/DEAH box helicase family protein K02240 comFA; competence protein ComFA
D GYM71_03695 ComF family protein K02242 comFC; competence protein ComFC
D GYM71_04035 cpaF; Flp pilus assembly complex ATPase component K02243 comGA; competence protein ComGA
D GYM71_04040 type II secretion system protein F K02244 comGB; competence protein ComGB
D GYM71_04045 prepilin-type N-terminal cleavage/methylation domain-containing protein K02245 comGC; competence protein ComGC
D GYM71_04050 prepilin-type N-terminal cleavage/methylation domain-containing protein K02246 comGD; competence protein ComGD
D GYM71_04060 ComGF family competence protein K02248 comGF; competence protein ComGF
D GYM71_07945 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GYM71_03705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GYM71_07430 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GYM71_02680 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GYM71_07820 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GYM71_05965 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GYM71_06000 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GYM71_07205 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GYM71_06700 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GYM71_10270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:lpai02042]
D GYM71_03510 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYM71_02700 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D GYM71_04880 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lpai02022]
D GYM71_00800 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D GYM71_00795 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D GYM71_06705 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D GYM71_06710 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D GYM71_04115 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D GYM71_02125 response regulator K11692 K11692; two-component system, CitB family, response regulator DctR
D GYM71_02130 sensor histidine kinase K11614 yufL; two-component system, CitB family, sensor histidine kinase MalK [EC:2.7.13.3]
D GYM71_08995 sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D GYM71_08990 response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lpai04812]
D GYM71_04360 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYM71_04450 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYM71_04520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYM71_04515 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GYM71_01420 ParA family protein K03496 parA; chromosome partitioning protein
D GYM71_01415 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GYM71_01425 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lpai04147]
D GYM71_05615 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GYM71_03835 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYM71_06995 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GYM71_03840 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GYM71_04780 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GYM71_07250 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GYM71_05700 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GYM71_04140 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GYM71_03955 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GYM71_04705 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GYM71_06880 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GYM71_01750 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_05370 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_08110 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D GYM71_03465 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D GYM71_07815 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GYM71_05665 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GYM71_09730 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D GYM71_07500 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D GYM71_04095 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GYM71_09690 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D GYM71_06620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GYM71_00605 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D GYM71_07200 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GYM71_03845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GYM71_07510 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GYM71_09115 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lpai02048]
D GYM71_01760 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GYM71_01765 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D GYM71_01755 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D GYM71_04065 class I SAM-dependent methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D GYM71_03200 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D GYM71_03225 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D GYM71_08370 RelB K07473 dinJ; DNA-damage-inducible protein J
D GYM71_09455 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D GYM71_09500 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D GYM71_09450 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D GYM71_03220 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D GYM71_03240 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D GYM71_04520 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GYM71_04360 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYM71_04450 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GYM71_04950 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GYM71_04945 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GYM71_04420 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GYM71_04570 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lpai01504]
D GYM71_01885 ABC-F family ATP-binding cassette domain-containing protein K18231 msr; macrolide transport system ATP-binding/permease protein
D GYM71_01870 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D GYM71_09380 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_10130 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D GYM71_09375 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYM71_10125 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D GYM71_09370 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_10120 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D GYM71_09365 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D GYM71_10115 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D GYM71_03110 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D GYM71_09395 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lpai03100]
D GYM71_01950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYM71_07165 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GYM71_02550 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYM71_06230 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYM71_03360 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GYM71_00550 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYM71_01965 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYM71_07150 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GYM71_02575 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYM71_02620 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GYM71_02650 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GYM71_02330 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYM71_02645 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYM71_02345 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYM71_04265 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GYM71_02605 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYM71_07060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYM71_04260 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GYM71_08710 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYM71_02540 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYM71_07975 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYM71_02585 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GYM71_02640 tRNA-His K14226 tRNA-His; tRNA His
D GYM71_01945 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYM71_02590 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYM71_07170 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GYM71_07005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_03125 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_02545 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_02530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_02655 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GYM71_02525 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYM71_00785 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYM71_00790 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GYM71_02560 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYM71_02565 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GYM71_02570 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYM71_02615 tRNA-Met K14230 tRNA-Met; tRNA Met
D GYM71_02580 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYM71_02625 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GYM71_07970 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYM71_02555 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GYM71_05570 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYM71_02610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYM71_02595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYM71_07145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GYM71_02535 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYM71_00100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYM71_08780 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYM71_02015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GYM71_02635 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GYM71_02340 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYM71_02630 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GYM71_02520 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYM71_07055 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYM71_07080 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYM71_07085 tRNA-Val K14237 tRNA-Val; tRNA Val
D GYM71_00535 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_01940 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_02505 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_07175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GYM71_00540 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_01955 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_02510 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_07160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GYM71_01960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_02515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_07155 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_00545 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GYM71_07345 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D GYM71_05035 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D GYM71_04085 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GYM71_05510 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D GYM71_02120 lactate dehydrogenase K25634 hgdH; 2-oxoglutarate reductase [EC:1.1.1.399]
D GYM71_08955 lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D GYM71_05260 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D GYM71_05270 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D GYM71_05280 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GYM71_02500 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D GYM71_05895 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D GYM71_05030 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D GYM71_03825 argF; ornithine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D GYM71_05850 acyltransferase domain-containing protein K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39]
D GYM71_09320 nucleoside 2-deoxyribosyltransferase K08728 E2.4.2.6; nucleoside deoxyribosyltransferase [EC:2.4.2.6]
D GYM71_03725 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GYM71_01395 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D GYM71_03010 carbohydrate kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D GYM71_02235 pfkB; 1-phosphofructokinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D GYM71_06080 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D GYM71_05255 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D GYM71_05830 malonate decarboxylase holo-ACP synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D GYM71_03905 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D GYM71_03720 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D GYM71_00530 beta-lactamase family protein K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D GYM71_09610 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D GYM71_01225 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYM71_01390 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYM71_02720 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYM71_09315 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYM71_09685 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYM71_10290 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D GYM71_06745 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D GYM71_00060 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D GYM71_07550 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GYM71_08675 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GYM71_08670 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D GYM71_09605 alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D GYM71_02220 DUF5110 domain-containing protein K25767 nag31; exo-acting protein-alpha-N-acetylgalactosaminidase [EC:3.2.1.217]
D GYM71_09800 DUF2961 domain-containing protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D GYM71_01735 DUF2961 domain-containing protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225]
D GYM71_07670 alpha-mannosidase K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D GYM71_09145 amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GYM71_04635 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GYM71_02310 SIS domain-containing protein K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D GYM71_03005 SIS domain-containing protein K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D GYM71_09390 protein kinase/lanthionine synthetase C family protein K24914 lanKC; class III lanthionine synthetase [EC:3.13.2.4]
D GYM71_05835 mdcD; biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D GYM71_06980 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D GYM71_02040 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D GYM71_09235 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D GYM71_05385 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D GYM71_02975 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D GYM71_08685 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D GYM71_01625 SIS domain-containing protein K19504 gfrE; glucoselysine-6-phosphate deglycase
D GYM71_02820 SIS domain-containing protein K19504 gfrE; glucoselysine-6-phosphate deglycase
D GYM71_08580 SIS domain-containing protein K19504 gfrE; glucoselysine-6-phosphate deglycase
D GYM71_02790 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase
D GYM71_02825 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase
D GYM71_08585 SIS domain-containing protein K19510 gfrF; fructoselysine-6-phosphate deglycase
C 99982 Energy metabolism
D GYM71_00600 hypothetical protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D GYM71_04885 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D GYM71_04980 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D GYM71_01810 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
D GYM71_02055 DNAse K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D GYM71_02670 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D GYM71_04795 reductase K02859 ribT; riboflavin biosynthesis RibT protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GYM71_04550 cold shock domain-containing protein K03704 cspA; cold shock protein
D GYM71_03545 spxA; transcriptional regulator Spx K16509 spxA; regulatory protein spx
C 99974 Translation
C 99975 Protein processing
D GYM71_04710 trigger factor K03545 tig; trigger factor
D GYM71_02690 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D GYM71_03550 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D GYM71_04445 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D GYM71_05885 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D GYM71_04905 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D GYM71_05065 DnaD domain protein K02086 dnaD; DNA replication protein
D GYM71_00925 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D GYM71_04400 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D GYM71_08265 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GYM71_09405 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GYM71_08260 IS3 family transposase K07497 K07497; putative transposase
D GYM71_09410 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D GYM71_07335 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GYM71_03400 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D GYM71_01995 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D GYM71_05975 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GYM71_08120 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D GYM71_05390 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D GYM71_05360 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D GYM71_05405 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D GYM71_10230 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D GYM71_04640 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D GYM71_05240 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D GYM71_06260 hypothetical protein K07273 acm; lysozyme
C 99994 Others
D GYM71_07385 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D GYM71_05395 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D GYM71_04110 SdpI family protein K26996 sdpI; immunity protein, SdpI family
D GYM71_07735 DUF1648 domain-containing protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GYM71_03555 competence protein K06198 coiA; competence protein CoiA
D GYM71_00495 phosphatase K04477 ycdX; putative hydrolase
D GYM71_06855 DUF4479 and tRNA-binding domain-containing protein K06878 K06878; tRNA-binding protein
D GYM71_01880 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D GYM71_00480 noncanonical pyrimidine nucleotidase, YjjG family K07025 K07025; putative hydrolase of the HAD superfamily
D GYM71_03455 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D GYM71_00870 LemA family protein K03744 lemA; LemA protein
D GYM71_03100 SprT family protein K03095 sprL; SprT-like protein
D GYM71_02495 hypothetical protein K03975 dedA; membrane-associated protein
C 99997 Function unknown
D GYM71_08505 HD domain-containing protein K06885 K06885; uncharacterized protein
D GYM71_03210 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D GYM71_03485 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D GYM71_03185 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D GYM71_08775 HD domain-containing protein K06950 K06950; uncharacterized protein
D GYM71_04150 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D GYM71_06530 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D GYM71_05650 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D GYM71_07530 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D GYM71_04745 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D GYM71_04365 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D GYM71_05245 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D GYM71_02725 cupin domain-containing protein K09705 K09705; uncharacterized protein
D GYM71_05970 transcriptional regulator K09787 K09787; uncharacterized protein
D GYM71_04785 RNA-binding protein K00243 K00243; uncharacterized protein
D GYM71_01345 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D GYM71_08620 DUF871 domain-containing protein K09963 K09963; uncharacterized protein
D GYM71_08625 DUF871 domain-containing protein K09963 K09963; uncharacterized protein
D GYM71_09720 DUF871 domain-containing protein K09963 K09963; uncharacterized protein
D GYM71_05915 YneF family protein K09976 K09976; uncharacterized protein
D GYM71_05740 YlxR family protein K07742 ylxR; uncharacterized protein
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#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 18, 2024