+D GENES KO
#
KEGG Orthology (KO) - Secundilactobacillus paracollinoides
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lpd00010]
D AYR62_06970 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_13375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_03720 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYR62_03450 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AYR62_02880 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYR62_03440 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYR62_03445 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AYR62_01380 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_08380 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_14775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_03455 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_05845 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AYR62_01925 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D AYR62_04615 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D AYR62_04620 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D AYR62_04625 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_00915 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_02410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_12510 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AYR62_14205 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_14260 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_03105 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_06015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_07070 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_00530 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AYR62_10640 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AYR62_16115 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AYR62_09720 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYR62_13295 glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
C 00020 Citrate cycle (TCA cycle) [PATH:lpd00020]
D AYR62_00275 methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AYR62_00280 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AYR62_00270 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_15510 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AYR62_04615 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D AYR62_04620 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D AYR62_04625 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:lpd00030]
D AYR62_03720 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYR62_14550 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AYR62_09565 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D AYR62_14520 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AYR62_02140 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AYR62_06725 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AYR62_13380 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AYR62_11525 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AYR62_01250 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AYR62_15580 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AYR62_06120 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D AYR62_13390 hypothetical protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D AYR62_06115 hypothetical protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D AYR62_12445 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D AYR62_01990 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D AYR62_12470 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D AYR62_15585 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D AYR62_01995 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AYR62_09720 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYR62_02290 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AYR62_04490 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AYR62_13295 glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D AYR62_05585 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D AYR62_08015 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
C 00040 Pentose and glucuronate interconversions [PATH:lpd00040]
D AYR62_11510 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D AYR62_03025 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_05065 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_10560 araD; ribulose phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D AYR62_06725 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AYR62_10555 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D AYR62_14640 hypothetical protein K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D AYR62_11075 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D AYR62_11080 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:lpd00051]
D AYR62_10070 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AYR62_11080 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D AYR62_03450 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AYR62_08415 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AYR62_08410 PTS fructose transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D AYR62_08405 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D AYR62_08400 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D AYR62_11965 hypothetical protein K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:lpd00052]
D AYR62_00530 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AYR62_10640 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AYR62_16115 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AYR62_09715 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AYR62_09705 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AYR62_09710 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AYR62_03025 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_05065 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_09720 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYR62_06970 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_13375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_01820 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AYR62_01825 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AYR62_03015 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D AYR62_00445 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AYR62_01935 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AYR62_12800 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D AYR62_10560 araD; ribulose phosphate epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:lpd00500]
D AYR62_12800 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AYR62_03025 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_05065 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_11010 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AYR62_02510 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AYR62_15655 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D AYR62_12215 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D AYR62_15955 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D AYR62_09790 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D AYR62_16110 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D AYR62_07380 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D AYR62_09720 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYR62_06970 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_13375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_03720 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYR62_10070 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lpd00520]
D AYR62_12780 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AYR62_02550 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AYR62_03555 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D AYR62_10070 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AYR62_03550 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AYR62_03545 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AYR62_02285 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AYR62_04505 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D AYR62_02345 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYR62_03860 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYR62_03520 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AYR62_07950 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AYR62_11615 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D AYR62_05640 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D AYR62_06970 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_13375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_09720 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYR62_03025 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_05065 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_09715 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AYR62_09705 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AYR62_09710 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AYR62_03015 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D AYR62_08415 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AYR62_08410 PTS fructose transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D AYR62_08405 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D AYR62_08400 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D AYR62_03720 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:lpd00620]
D AYR62_04615 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D AYR62_04620 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D AYR62_04625 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_12510 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AYR62_14205 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_14260 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_03105 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_06015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_07070 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_10155 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_10460 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_10950 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_07650 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_03495 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AYR62_05845 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AYR62_06850 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AYR62_06870 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYR62_06860 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYR62_06855 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AYR62_01580 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AYR62_07045 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AYR62_08945 hypothetical protein K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D AYR62_14005 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D AYR62_00915 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_02410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_10430 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D AYR62_10875 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D AYR62_04920 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D AYR62_08260 hypothetical protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D AYR62_03655 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D AYR62_03140 lactate racemization operon protein LarA K22373 larA; lactate racemase [EC:5.1.2.1]
D AYR62_15510 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AYR62_11485 NAD-dependent malic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D AYR62_01925 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_11040 hypothetical protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lpd00630]
D AYR62_00275 methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AYR62_00280 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_14675 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D AYR62_14785 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AYR62_03740 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AYR62_06950 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYR62_03805 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_10030 hypothetical protein K02437 gcvH; glycine cleavage system H protein
D AYR62_06050 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYR62_03655 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D AYR62_06105 oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
C 00640 Propanoate metabolism [PATH:lpd00640]
D AYR62_10155 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_10460 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_10950 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_07650 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_03495 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AYR62_10195 propanediol utilization protein K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_06850 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AYR62_06870 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYR62_06860 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYR62_06855 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AYR62_00915 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_02410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_15040 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D AYR62_10230 pduC; propanediol dehydratase K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D AYR62_10225 propanediol dehydratase K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D AYR62_10220 propanediol dehydratase K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D AYR62_12570 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
D AYR62_10160 alcohol dehydrogenase K13921 pduQ; 1-propanol dehydrogenase
D AYR62_10165 aldehyde dehydrogenase EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:lpd00650]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_02050 hypothetical protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AYR62_13845 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_01865 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_03065 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_12510 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AYR62_15255 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AYR62_00875 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AYR62_04870 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D AYR62_14030 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYR62_11630 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D AYR62_04330 butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D AYR62_09620 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D AYR62_12785 diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:lpd00660]
D AYR62_14030 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYR62_11630 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D AYR62_11050 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AYR62_11055 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AYR62_11045 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:lpd00562]
D AYR62_04645 fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AYR62_03450 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lpd00190]
D AYR62_00850 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AYR62_03230 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AYR62_03235 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AYR62_03835 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AYR62_03845 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AYR62_03840 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AYR62_03830 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AYR62_03850 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AYR62_03815 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AYR62_03825 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AYR62_03820 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AYR62_06045 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D AYR62_14975 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AYR62_03590 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:lpd00680]
D AYR62_03805 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AYR62_14775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_03455 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_13390 hypothetical protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D AYR62_06115 hypothetical protein K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D AYR62_06120 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D AYR62_10155 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_10460 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_10950 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_07650 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_03495 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AYR62_01380 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_08380 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_09805 hypothetical protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10410 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10615 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10405 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AYR62_02825 phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
C 00910 Nitrogen metabolism [PATH:lpd00910]
D AYR62_00695 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D AYR62_00780 narZ; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_00785 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_00795 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_11930 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AYR62_06950 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYR62_14195 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AYR62_14190 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AYR62_12265 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYR62_15750 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYR62_04540 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYR62_11840 hypothetical protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:lpd00920]
D AYR62_08480 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein
D AYR62_08485 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D AYR62_08475 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D AYR62_10810 ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D AYR62_10780 ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D AYR62_10775 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AYR62_10770 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AYR62_01465 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D AYR62_07805 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D AYR62_14545 Crp/Fnr family transcriptional regulator K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D AYR62_11745 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AYR62_05375 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AYR62_11755 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AYR62_09170 hypothetical protein K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D AYR62_12295 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lpd00061]
D AYR62_06850 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AYR62_06870 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AYR62_06860 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AYR62_06855 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AYR62_06690 acyl carrier protein K02078 acpP; acyl carrier protein
D AYR62_06895 acyl carrier protein K02078 acpP; acyl carrier protein
D AYR62_06885 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AYR62_06900 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AYR62_06875 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AYR62_11670 NAD(P)-dependent dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYR62_06880 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYR62_06865 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYR62_06910 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYR62_02035 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AYR62_06890 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D AYR62_08465 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation [PATH:lpd00062]
D AYR62_13845 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_01865 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_03065 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00071 Fatty acid degradation [PATH:lpd00071]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_13845 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_01865 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_03065 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_08465 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AYR62_12510 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AYR62_14205 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_14260 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_03105 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_06015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_07070 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lpd00561]
D AYR62_06050 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYR62_15040 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D AYR62_00495 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AYR62_06585 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AYR62_06695 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AYR62_06025 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYR62_06200 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYR62_04905 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AYR62_06205 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AYR62_08045 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AYR62_07850 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D AYR62_09255 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D AYR62_04125 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D AYR62_00445 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AYR62_01935 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AYR62_12570 1,3-propanediol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00564 Glycerophospholipid metabolism [PATH:lpd00564]
D AYR62_03370 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AYR62_06025 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYR62_06200 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYR62_04905 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AYR62_06205 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AYR62_07920 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D AYR62_08045 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AYR62_00240 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AYR62_03185 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AYR62_03935 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AYR62_01780 ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D AYR62_01785 ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D AYR62_04960 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AYR62_04085 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D AYR62_14315 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AYR62_04060 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AYR62_08145 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:lpd00600]
D AYR62_01820 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AYR62_01825 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AYR62_00445 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D AYR62_01935 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lpd00230]
D AYR62_02185 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AYR62_04440 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AYR62_01995 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AYR62_09720 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYR62_02290 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AYR62_04490 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AYR62_07440 hypothetical protein K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AYR62_07450 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AYR62_07465 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D AYR62_07475 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D AYR62_07470 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AYR62_07455 hypothetical protein K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AYR62_07485 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AYR62_08085 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AYR62_07490 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AYR62_07480 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AYR62_00460 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AYR62_10855 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AYR62_07445 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AYR62_01800 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AYR62_04820 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AYR62_02000 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AYR62_02450 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D AYR62_01330 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AYR62_12705 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AYR62_07750 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AYR62_08095 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D AYR62_09120 NUDIX hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D AYR62_09020 GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AYR62_00450 guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D AYR62_09115 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AYR62_06770 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AYR62_08245 ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AYR62_08250 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AYR62_02815 ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent K00527 rtpR; ribonucleoside-triphosphate reductase (thioredoxin) [EC:1.17.4.2]
D AYR62_05145 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AYR62_14980 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AYR62_02205 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AYR62_03585 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AYR62_03595 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AYR62_00205 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D AYR62_11680 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D AYR62_04315 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D AYR62_15250 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AYR62_04105 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D AYR62_08595 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AYR62_00050 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D AYR62_12265 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYR62_15750 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYR62_04540 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:lpd00240]
D AYR62_10060 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYR62_06420 carbamoyl phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYR62_10055 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYR62_06425 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYR62_09515 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AYR62_09510 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AYR62_08915 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D AYR62_09285 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AYR62_09290 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AYR62_04940 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AYR62_09120 NUDIX hydrolase K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D AYR62_02340 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AYR62_05900 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D AYR62_07010 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D AYR62_03810 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AYR62_06430 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AYR62_15250 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AYR62_04105 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D AYR62_02010 deoA; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D AYR62_09860 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AYR62_02815 ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent K00527 rtpR; ribonucleoside-triphosphate reductase (thioredoxin) [EC:1.17.4.2]
D AYR62_08245 ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AYR62_08250 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AYR62_08205 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AYR62_08370 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AYR62_03785 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D AYR62_05940 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AYR62_15305 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D AYR62_15300 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lpd00250]
D AYR62_07295 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D AYR62_09375 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AYR62_12930 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AYR62_10935 hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D AYR62_04750 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AYR62_04755 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AYR62_00460 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AYR62_10855 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AYR62_09515 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AYR62_15255 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AYR62_00875 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AYR62_14195 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AYR62_14190 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AYR62_11930 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AYR62_06950 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYR62_10060 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYR62_06420 carbamoyl phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYR62_10055 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYR62_06425 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYR62_07470 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AYR62_03550 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:lpd00260]
D AYR62_10010 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYR62_04065 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYR62_09975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AYR62_14200 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYR62_08435 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYR62_08430 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AYR62_15380 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AYR62_01620 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D AYR62_03805 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AYR62_06050 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AYR62_01380 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_08380 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_09805 hypothetical protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10410 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10615 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10405 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_10030 hypothetical protein K02437 gcvH; glycine cleavage system H protein
D AYR62_06300 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D AYR62_15065 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AYR62_15070 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:lpd00270]
D AYR62_11745 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AYR62_05375 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AYR62_11755 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AYR62_10790 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_11750 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_12290 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_06310 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_10585 homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D AYR62_11740 homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D AYR62_11245 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AYR62_07515 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AYR62_04450 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D AYR62_10850 aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D AYR62_14910 aspartate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D AYR62_09645 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D AYR62_03975 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D AYR62_09625 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AYR62_10930 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AYR62_10010 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYR62_04065 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYR62_09975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AYR62_14200 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYR62_08435 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYR62_09170 hypothetical protein K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D AYR62_12295 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AYR62_10800 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AYR62_11135 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AYR62_03760 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYR62_01730 hypothetical protein K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AYR62_08030 gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AYR62_00915 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_02410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_09805 hypothetical protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10410 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10615 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10405 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:lpd00280]
D AYR62_03760 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_13845 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_01865 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_03065 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_09190 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_04870 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lpd00290]
D AYR62_11050 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AYR62_11055 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AYR62_11045 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AYR62_14030 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYR62_14035 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AYR62_14055 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AYR62_08500 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AYR62_03760 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYR62_11040 hypothetical protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:lpd00300]
D AYR62_14200 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYR62_08435 hypothetical protein K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AYR62_10010 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYR62_04065 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYR62_09975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AYR62_09990 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AYR62_09985 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AYR62_11345 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AYR62_00260 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AYR62_15360 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AYR62_10015 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AYR62_10005 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AYR62_10000 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D AYR62_09980 amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYR62_10435 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYR62_10785 aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYR62_11660 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYR62_09995 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D AYR62_13870 aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AYR62_01040 aspartate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AYR62_07305 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AYR62_02370 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lpd00310]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_13845 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_01865 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_03065 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_00875 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:lpd00220]
D AYR62_12270 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AYR62_04530 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AYR62_04750 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AYR62_04755 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AYR62_04525 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D AYR62_07470 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AYR62_06950 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYR62_10060 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYR62_06420 carbamoyl phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AYR62_10055 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYR62_06425 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AYR62_12265 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYR62_15750 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYR62_04540 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D AYR62_11930 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AYR62_11355 N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D AYR62_10795 acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D AYR62_11350 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AYR62_11360 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AYR62_11345 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:lpd00330]
D AYR62_09860 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AYR62_15745 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D AYR62_15765 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D AYR62_04495 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AYR62_02545 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AYR62_14375 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AYR62_14380 proA; gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D AYR62_09140 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AYR62_13185 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:lpd00340]
D AYR62_10690 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AYR62_10695 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D AYR62_10655 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D AYR62_10660 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D AYR62_10670 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D AYR62_10675 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AYR62_10665 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AYR62_10680 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D AYR62_10650 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AYR62_10700 histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D AYR62_10685 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D AYR62_12100 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism [PATH:lpd00350]
D AYR62_10650 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AYR62_12510 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AYR62_14205 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_14260 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_03105 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_06015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_07070 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_11385 2-keto-4-pentenoate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D AYR62_00875 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AYR62_03650 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D AYR62_05330 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00360 Phenylalanine metabolism [PATH:lpd00360]
D AYR62_02050 hypothetical protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AYR62_10650 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AYR62_03650 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D AYR62_05330 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D AYR62_04495 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:lpd00380]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_13845 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_01865 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_03065 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_04495 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lpd00400]
D AYR62_15110 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AYR62_15155 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AYR62_15115 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AYR62_15160 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AYR62_12465 hypothetical protein K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D AYR62_15140 3-dehydroquinase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D AYR62_12675 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AYR62_12685 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AYR62_12690 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AYR62_15095 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AYR62_15090 anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AYR62_15085 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AYR62_15075 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D AYR62_15080 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D AYR62_15065 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AYR62_15070 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AYR62_12680 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AYR62_11405 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D AYR62_10650 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:lpd00410]
D AYR62_15255 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AYR62_15305 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D AYR62_15300 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
C 00430 Taurine and hypotaurine metabolism [PATH:lpd00430]
D AYR62_15255 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AYR62_03495 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AYR62_10155 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_10460 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_10950 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AYR62_07650 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lpd00450]
D AYR62_12295 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AYR62_10790 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_11750 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_12290 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_06310 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_11245 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AYR62_00360 cysteine sulfinate desulfinase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AYR62_03375 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AYR62_02235 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lpd00460]
D AYR62_11010 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D AYR62_09375 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AYR62_03805 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lpd00470]
D AYR62_02385 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AYR62_03220 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AYR62_01665 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYR62_01190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01675 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_07470 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AYR62_12895 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AYR62_07755 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3]
D AYR62_04385 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AYR62_04560 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D AYR62_07295 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D AYR62_06300 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D AYR62_10015 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AYR62_10005 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:lpd00480]
D AYR62_01730 hypothetical protein K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AYR62_08030 gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AYR62_13055 peptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AYR62_00960 pyridine nucleotide-disulfide oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D AYR62_10490 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D AYR62_14605 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D AYR62_06100 hypothetical protein K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D AYR62_00270 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AYR62_14520 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AYR62_02140 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AYR62_14550 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AYR62_05370 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:lpd00511]
D AYR62_01820 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AYR62_01825 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:lpd00542]
D AYR62_03255 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lpd00541]
D AYR62_03025 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_05065 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AYR62_09710 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AYR62_03015 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D AYR62_06580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AYR62_02285 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AYR62_07950 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lpd00550]
D AYR62_02345 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYR62_03860 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYR62_03520 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AYR62_07180 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AYR62_04385 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AYR62_07305 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AYR62_03220 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AYR62_02370 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AYR62_05245 UDP kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D AYR62_04955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AYR62_01870 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYR62_04380 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AYR62_04390 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AYR62_06515 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AYR62_07260 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D AYR62_04375 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D AYR62_06990 penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D AYR62_01350 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_14225 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_03635 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_03780 UDP-N-acetylmuramyl peptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D AYR62_03775 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:lpd00552]
D AYR62_01870 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYR62_03255 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AYR62_02560 acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D AYR62_05195 glycosyl transferase K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D AYR62_07910 glycosyl transferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D AYR62_05205 CDP-glycerol glycerophosphotransferase K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D AYR62_01665 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYR62_01190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01675 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01670 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D AYR62_01195 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D AYR62_01680 hypothetical protein K03740 dltD; D-alanine transfer protein
D AYR62_01485 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D AYR62_02940 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D AYR62_01715 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D AYR62_08390 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D AYR62_01515 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D AYR62_09255 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D AYR62_04125 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D AYR62_07850 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D AYR62_07845 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D AYR62_03600 lipopolysaccharide cholinephosphotransferase K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lpd00543]
D AYR62_03255 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AYR62_11995 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AYR62_02605 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AYR62_02790 putative glycosyltransferase, exosortase G system-associated K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AYR62_11745 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AYR62_05375 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lpd00730]
D AYR62_00060 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D AYR62_03985 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_04455 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_03990 tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AYR62_00055 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AYR62_00550 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D AYR62_00070 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AYR62_00560 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AYR62_06730 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AYR62_06720 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D AYR62_08595 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AYR62_11505 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D AYR62_00075 acetylornithine deacetylase K20895 ylmB; formylaminopyrimidine deformylase [EC:3.5.1.-]
C 00740 Riboflavin metabolism [PATH:lpd00740]
D AYR62_12840 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AYR62_12830 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AYR62_06575 HAD family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D AYR62_12845 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AYR62_12835 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AYR62_05015 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AYR62_12605 NADPH-dependent oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D AYR62_00550 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D AYR62_02185 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AYR62_04440 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:lpd00750]
D AYR62_02105 hypothetical protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D AYR62_06395 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D AYR62_10405 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AYR62_15380 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AYR62_09815 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lpd00760]
D AYR62_15445 hypothetical protein K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D AYR62_01600 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D AYR62_02565 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D AYR62_02000 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AYR62_07110 nadD; nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AYR62_02570 NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D AYR62_02220 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D AYR62_04320 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D AYR62_03665 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AYR62_03670 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AYR62_03675 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D AYR62_00875 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:lpd00770]
D AYR62_14030 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AYR62_14035 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AYR62_14055 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AYR62_08500 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AYR62_11295 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AYR62_11410 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AYR62_13875 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AYR62_01725 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AYR62_09025 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D AYR62_06760 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AYR62_04670 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AYR62_02380 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AYR62_03760 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYR62_15305 dihydropyrimidine dehydrogenase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D AYR62_15300 dihydropyrimidine dehydrogenase subunit B K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
C 00780 Biotin metabolism [PATH:lpd00780]
D AYR62_06875 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AYR62_11670 NAD(P)-dependent dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYR62_06880 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYR62_06865 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYR62_06910 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYR62_02035 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AYR62_11825 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lpd00785]
D AYR62_00335 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AYR62_02325 ligase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D AYR62_00340 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D AYR62_10025 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D AYR62_12380 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_04615 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D AYR62_04620 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D AYR62_04625 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AYR62_10030 hypothetical protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:lpd00790]
D AYR62_12725 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AYR62_12720 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AYR62_12700 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AYR62_05945 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AYR62_12710 hypothetical protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AYR62_04010 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AYR62_12840 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AYR62_02795 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AYR62_00690 cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AYR62_00755 cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AYR62_00680 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AYR62_00770 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AYR62_00765 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AYR62_00745 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:lpd00670]
D AYR62_05945 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AYR62_06445 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D AYR62_09330 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AYR62_06810 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AYR62_03805 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AYR62_07450 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AYR62_07445 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AYR62_06750 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AYR62_05940 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AYR62_11240 methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D AYR62_06985 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lpd00860]
D AYR62_10295 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AYR62_10280 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AYR62_10285 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AYR62_10290 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AYR62_10320 bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D AYR62_10300 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D AYR62_10315 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D AYR62_10310 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D AYR62_10330 cbiH; cobalt-precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D AYR62_10340 cbiF; cobalt-precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D AYR62_10335 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D AYR62_10325 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D AYR62_10355 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D AYR62_10345 cobalt-precorrin-6Y C(15)-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D AYR62_10350 cobalt-precorrin-6Y C(5)-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D AYR62_10360 cbiC; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D AYR62_10370 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D AYR62_10385 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AYR62_10180 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AYR62_02810 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AYR62_10305 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D AYR62_10365 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D AYR62_10270 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D AYR62_10265 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D AYR62_14515 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D AYR62_10260 hypothetical protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D AYR62_10375 hypothetical protein K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lpd00130]
D AYR62_09770 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AYR62_00635 hypothetical protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D AYR62_00640 hypothetical protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D AYR62_00645 hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D AYR62_00650 hypothetical protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D AYR62_01835 2-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D AYR62_01840 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D AYR62_01845 aromatic compound catabolic protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D AYR62_08100 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AYR62_12820 hypothetical protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AYR62_06175 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AYR62_00305 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AYR62_05545 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AYR62_05595 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AYR62_00035 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AYR62_14655 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AYR62_05600 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lpd00900]
D AYR62_02260 ipk; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_04870 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D AYR62_02210 3-hydroxy-3-methylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D AYR62_06550 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D AYR62_06560 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D AYR62_06555 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D AYR62_06565 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D AYR62_06795 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AYR62_04955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:lpd00903]
D AYR62_00480 hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
D AYR62_13845 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_01865 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_03065 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AYR62_13380 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D AYR62_06580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures [PATH:lpd01054]
D AYR62_07295 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D AYR62_00635 hypothetical protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D AYR62_06580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:lpd00946]
D AYR62_11010 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:lpd00311]
D AYR62_15280 hypothetical protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D AYR62_01760 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AYR62_04570 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:lpd00332]
D AYR62_14375 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AYR62_14380 proA; gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:lpd00261]
D AYR62_10010 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYR62_04065 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AYR62_09975 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AYR62_09990 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AYR62_09985 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lpd00521]
D AYR62_06970 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_13375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_09720 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AYR62_04645 fructose 1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AYR62_06580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D AYR62_06970 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D AYR62_13375 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D AYR62_06580 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:lpd00401]
D AYR62_12680 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AYR62_10650 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AYR62_15095 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AYR62_15090 anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AYR62_06885 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AYR62_11670 NAD(P)-dependent dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYR62_06880 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYR62_02035 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AYR62_06690 acyl carrier protein K02078 acpP; acyl carrier protein
D AYR62_06895 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:lpd00999]
D AYR62_07515 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AYR62_11010 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lpd00362]
D AYR62_06590 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AYR62_00180 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D AYR62_02050 hypothetical protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:lpd00627]
D AYR62_04495 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AYR62_01580 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AYR62_07045 hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AYR62_14240 3,4-dihydroxybenzoate decarboxylase K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
D AYR62_14245 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K22959 lpdB; gallate decarboxylase subunit B
D AYR62_14250 hypothetical protein K22960 lpdD; gallate decarboxylase subunit D
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:lpd00625]
D AYR62_14205 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_14260 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_03105 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_06015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_07070 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_12510 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AYR62_09385 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D AYR62_05680 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D AYR62_09385 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D AYR62_05680 HAD family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
D AYR62_03650 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D AYR62_05330 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00622 Xylene degradation [PATH:lpd00622]
D AYR62_03650 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D AYR62_05330 aryl-alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D AYR62_06590 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:lpd00643]
D AYR62_04495 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:lpd00930]
D AYR62_00480 hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D AYR62_13845 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_01865 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AYR62_03065 3-hydroxybutyryl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D AYR62_06590 tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:lpd00626]
D AYR62_14205 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_14260 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_03105 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_06015 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_07070 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D AYR62_12510 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lpd03020]
D AYR62_08745 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AYR62_08740 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AYR62_08570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AYR62_06765 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AYR62_02335 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
D AYR62_09525 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lpd03010]
D AYR62_05905 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AYR62_04930 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AYR62_08665 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AYR62_03970 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AYR62_08615 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AYR62_13925 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AYR62_08715 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AYR62_08630 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AYR62_08535 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AYR62_08700 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AYR62_08575 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AYR62_08720 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AYR62_08580 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AYR62_12145 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AYR62_04710 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AYR62_06645 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AYR62_08650 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AYR62_13915 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AYR62_08675 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AYR62_04705 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AYR62_05220 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AYR62_08305 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AYR62_08680 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AYR62_08695 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AYR62_08690 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AYR62_08635 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AYR62_08625 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AYR62_08295 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AYR62_13895 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AYR62_08300 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AYR62_08310 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AYR62_08540 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AYR62_08645 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AYR62_08605 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AYR62_08660 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AYR62_08565 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AYR62_08620 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AYR62_06620 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AYR62_07130 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AYR62_06845 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AYR62_08670 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AYR62_08685 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AYR62_08640 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AYR62_06835 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AYR62_06715 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AYR62_08655 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AYR62_08610 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AYR62_02350 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AYR62_00150 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AYR62_00155 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AYR62_07135 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AYR62_08585 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AYR62_14430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_02475 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_02155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_04130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_07600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_14455 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_14435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_02160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_02490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_04145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_07595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_14460 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_02495 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_02165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_07590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_04150 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_14440 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_14465 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lpd00970]
D AYR62_02485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYR62_04140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYR62_04180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_03430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_07985 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_08780 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_06930 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_15390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_02500 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYR62_03580 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYR62_07570 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYR62_04210 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYR62_04245 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYR62_07540 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AYR62_02530 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYR62_03745 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYR62_07545 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYR62_02540 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYR62_07580 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYR62_03750 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYR62_04235 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYR62_04170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_04220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_08765 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_08790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_07280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_00935 tRNA-His K14226 tRNA-His; tRNA His
D AYR62_07550 tRNA-His K14226 tRNA-His; tRNA His
D AYR62_04135 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYR62_04225 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYR62_02480 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYR62_04175 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_08425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_08785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_08800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_02180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_07340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_07535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_13715 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYR62_08805 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYR62_04160 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYR62_04205 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYR62_04190 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYR62_04195 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYR62_04240 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYR62_07565 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AYR62_04215 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AYR62_02175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYR62_04185 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYR62_08775 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYR62_04230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYR62_04200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYR62_07585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYR62_04825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYR62_08795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_02505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_08770 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_04165 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_02170 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_07555 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AYR62_02525 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYR62_02535 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYR62_07560 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYR62_07575 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYR62_08810 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYR62_04155 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYR62_08355 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D AYR62_08055 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AYR62_08050 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AYR62_08060 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AYR62_07795 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AYR62_05180 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AYR62_06530 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AYR62_05770 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AYR62_05775 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AYR62_07145 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AYR62_08815 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AYR62_08345 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AYR62_02235 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AYR62_06750 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AYR62_04005 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AYR62_07495 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AYR62_04430 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AYR62_02470 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AYR62_07270 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AYR62_04970 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AYR62_05175 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AYR62_07025 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AYR62_07020 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AYR62_02150 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AYR62_02200 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lpd03060]
D AYR62_08600 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYR62_08320 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AYR62_03465 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AYR62_07815 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AYR62_13970 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYR62_07050 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYR62_03290 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYR62_06665 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AYR62_08230 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D AYR62_06675 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AYR62_14090 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AYR62_06440 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lpd04122]
D AYR62_03985 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_04455 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_04465 tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AYR62_00680 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AYR62_00690 cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AYR62_00685 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D AYR62_00775 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AYR62_00755 cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AYR62_00770 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AYR62_03990 tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AYR62_00065 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D AYR62_00060 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lpd03018]
D AYR62_14775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_03455 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_03475 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AYR62_02375 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AYR62_09965 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYR62_05890 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYR62_15240 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AYR62_04100 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AYR62_04595 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AYR62_04715 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AYR62_05030 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AYR62_08135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYR62_14975 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AYR62_03590 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lpd03030]
D AYR62_03510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYR62_05840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYR62_04975 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYR62_08225 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYR62_08195 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYR62_04700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYR62_13955 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYR62_13890 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AYR62_05800 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AYR62_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AYR62_09845 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AYR62_06455 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AYR62_05980 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AYR62_07170 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYR62_08075 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lpd03410]
D AYR62_03490 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AYR62_05125 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D AYR62_05735 DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AYR62_03940 hypothetical protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AYR62_10415 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AYR62_03515 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AYR62_05210 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AYR62_07170 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYR62_04815 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AYR62_08075 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lpd03420]
D AYR62_02420 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AYR62_03390 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A
D AYR62_03385 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AYR62_04775 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D AYR62_08080 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_08990 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_09030 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_07170 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYR62_08075 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AYR62_09525 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:lpd03430]
D AYR62_04110 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AYR62_07770 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D AYR62_04115 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D AYR62_08080 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_08990 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_09030 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_06805 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AYR62_06800 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AYR62_04815 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AYR62_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AYR62_05840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYR62_04975 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYR62_13955 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYR62_08225 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYR62_04700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYR62_08195 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYR62_03510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYR62_08075 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lpd03440]
D AYR62_04815 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AYR62_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AYR62_13940 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D AYR62_05255 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AYR62_08215 recombination protein RecR K06187 recR; recombination protein RecR
D AYR62_04095 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D AYR62_07170 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYR62_07835 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AYR62_07830 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AYR62_06700 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AYR62_01020 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AYR62_04485 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AYR62_05840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYR62_04975 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYR62_13955 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYR62_08225 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYR62_04700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYR62_08195 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYR62_03510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYR62_06755 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lpd02010]
D AYR62_08480 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein
D AYR62_08485 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D AYR62_08475 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D AYR62_10810 ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D AYR62_10780 ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D AYR62_10775 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AYR62_10770 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AYR62_09470 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AYR62_09465 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D AYR62_09460 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D AYR62_09455 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D AYR62_00030 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYR62_11150 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYR62_07965 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYR62_11145 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D AYR62_11155 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D AYR62_11160 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AYR62_07970 hypothetical protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AYR62_09555 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D AYR62_15595 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D AYR62_11285 glycerol-3-phosphate ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AYR62_11280 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AYR62_11290 glycerol-3-phosphate ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AYR62_10730 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AYR62_03320 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AYR62_10735 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AYR62_03325 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AYR62_10740 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AYR62_03330 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AYR62_10745 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AYR62_03335 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AYR62_03340 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AYR62_12850 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AYR62_12860 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D AYR62_12865 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D AYR62_12855 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AYR62_11395 peptide ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D AYR62_09090 glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D AYR62_09080 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D AYR62_09085 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D AYR62_09095 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D AYR62_09895 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AYR62_09900 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D AYR62_10860 ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D AYR62_10830 amino acid permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D AYR62_04765 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D AYR62_04770 glnQ; glutamine ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D AYR62_14345 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AYR62_14340 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AYR62_14335 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AYR62_14330 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AYR62_09630 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AYR62_03900 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AYR62_09635 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AYR62_03895 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AYR62_09640 phosphate ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AYR62_03890 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AYR62_09065 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09070 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09960 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_10970 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_11845 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_01710 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_01815 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_00945 peptide ABC transpoter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09060 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D AYR62_09055 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D AYR62_09050 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D AYR62_09045 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AYR62_11830 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D AYR62_09315 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D AYR62_12330 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D AYR62_08550 cobalt ABC transporter ATP-binding protein K16785 ecfT; energy-coupling factor transport system permease protein
D AYR62_08560 cbiO; energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYR62_08555 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYR62_13030 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D AYR62_05200 Teichoic acid translocation permease TagG K09692 tagG; teichoic acid transport system permease protein
D AYR62_03570 teichoic acid ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D AYR62_04895 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_04900 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_12415 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYR62_16390 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYR62_09600 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_11580 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_11585 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_08105 amino acid ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AYR62_08110 thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AYR62_09875 hypothetical protein K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:lpd02060]
D AYR62_07855 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AYR62_04855 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D AYR62_07860 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AYR62_11965 hypothetical protein K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AYR62_02510 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AYR62_08415 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AYR62_08410 PTS fructose transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D AYR62_08405 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D AYR62_08400 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
C 03070 Bacterial secretion system [PATH:lpd03070]
D AYR62_08320 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AYR62_03465 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AYR62_08600 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYR62_07815 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AYR62_13970 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYR62_07050 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYR62_03290 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYR62_06675 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AYR62_06665 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lpd02020]
D AYR62_03315 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AYR62_03310 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D AYR62_10730 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AYR62_03320 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AYR62_13675 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AYR62_13705 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AYR62_13710 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D AYR62_13960 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AYR62_01665 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYR62_01670 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D AYR62_01190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01675 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01195 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D AYR62_01680 hypothetical protein K03740 dltD; D-alanine transfer protein
D AYR62_01180 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D AYR62_11210 two-component sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D AYR62_11215 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D AYR62_10705 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_15350 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_07065 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D AYR62_03250 murein hydrolase regulator LrgA K05338 lrgA; holin-like protein
D AYR62_03245 antiholin LrgB K05339 lrgB; holin-like protein LrgB
D AYR62_00780 narZ; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_00785 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_00795 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_00790 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D AYR62_00405 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_00730 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_15325 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_00400 DNA-binding response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D AYR62_14045 hypothetical protein K07696 nreC; two-component system, NarL family, response regulator NreC
D AYR62_15320 DNA-binding response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D AYR62_00735 NreA K10851 nreA; nitrogen regulatory protein A
D AYR62_11795 hypothetical protein K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D AYR62_11800 hypothetical protein K11624 ydfI; two-component system, NarL family, response regulator YdfI
D AYR62_06950 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_12275 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D AYR62_12280 hypothetical protein K07719 glnL; two-component system, response regulator GlnL
D AYR62_03230 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AYR62_03235 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AYR62_02360 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AYR62_07950 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lpd02024]
D AYR62_09625 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AYR62_10930 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AYR62_15095 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AYR62_15090 anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AYR62_15255 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D AYR62_15740 amino acid:proton antiporter K20265 gadC; glutamate:GABA antiporter
D AYR62_14345 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AYR62_14340 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AYR62_14335 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AYR62_14330 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AYR62_01415 MBL fold metallo-hydrolase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D AYR62_08465 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AYR62_12830 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AYR62_06400 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D AYR62_11210 two-component sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D AYR62_11215 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D AYR62_09065 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09070 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09960 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_10970 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_11845 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_01710 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_01815 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_00945 peptide ABC transpoter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09060 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D AYR62_09055 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D AYR62_09050 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D AYR62_09045 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AYR62_13970 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYR62_07050 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYR62_08320 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AYR62_03465 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AYR62_08600 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYR62_07815 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AYR62_03290 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYR62_06675 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AYR62_06665 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lpd02040]
D AYR62_09895 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AYR62_05805 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AYR62_14775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_03455 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D AYR62_10385 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AYR62_10180 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AYR62_02810 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lpd01501]
D AYR62_12780 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AYR62_09065 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09070 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09960 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_10970 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_11845 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_01710 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_01815 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_00945 peptide ABC transpoter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09060 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D AYR62_09055 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D AYR62_09050 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D AYR62_09045 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AYR62_01760 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AYR62_04570 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AYR62_08750 TetR family transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D AYR62_12415 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYR62_16390 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYR62_06515 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AYR62_07260 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:lpd01502]
D AYR62_10705 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_15350 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_03220 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AYR62_02385 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AYR62_02370 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AYR62_04380 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AYR62_04390 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lpd01503]
D AYR62_05170 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AYR62_13675 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AYR62_01665 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYR62_01670 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D AYR62_01190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01675 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01195 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D AYR62_01680 hypothetical protein K03740 dltD; D-alanine transfer protein
D AYR62_01180 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lpd01000]
C 01001 Protein kinases [BR:lpd01001]
D AYR62_06735 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AYR62_02950 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D AYR62_03315 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AYR62_13705 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AYR62_11210 two-component sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D AYR62_00405 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_00730 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_15325 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_11795 hypothetical protein K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D AYR62_12275 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lpd01009]
D AYR62_06740 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lpd01002]
D AYR62_06440 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AYR62_08375 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D AYR62_14100 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D AYR62_09020 GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AYR62_00585 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D AYR62_00950 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D AYR62_00490 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D AYR62_12065 hypothetical protein K07010 K07010; putative glutamine amidotransferase
D AYR62_04580 hypothetical protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D AYR62_09335 glycoside hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYR62_01400 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYR62_10105 D-alanyl-D-alanine carboxypeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYR62_04565 hydrolase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D AYR62_14195 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AYR62_03550 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AYR62_12930 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AYR62_15280 hypothetical protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D AYR62_02355 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D AYR62_14880 peptidase U34 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D AYR62_06600 peptidase U34 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D AYR62_07885 peptidase C69 K08659 pepDA; dipeptidase [EC:3.4.-.-]
D AYR62_09160 hypothetical protein K07052 K07052; CAAX protease family protein
D AYR62_01555 hypothetical protein K07052 K07052; CAAX protease family protein
D AYR62_06475 hypothetical protein K07052 K07052; CAAX protease family protein
D AYR62_07350 hypothetical protein K07052 K07052; CAAX protease family protein
D AYR62_07700 ABC transporter permease K07052 K07052; CAAX protease family protein
D AYR62_13055 peptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AYR62_04305 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D AYR62_09695 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D AYR62_10705 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_15350 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_07410 dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D AYR62_00260 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AYR62_15360 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AYR62_05820 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D AYR62_09995 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D AYR62_00050 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D AYR62_09765 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AYR62_13540 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AYR62_07715 dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D AYR62_06830 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AYR62_02455 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AYR62_11650 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D AYR62_04965 metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D AYR62_09265 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D AYR62_10710 aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D AYR62_13675 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AYR62_01350 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_14225 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_03635 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_03425 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AYR62_09135 X-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D AYR62_04675 peptidase K07177 K07177; Lon-like protease
D AYR62_04875 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AYR62_15850 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D AYR62_14090 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AYR62_09140 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AYR62_13185 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AYR62_06980 rhomboid family intramembrane serine protease K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D AYR62_13735 capsid protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D AYR62_06005 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
C 01003 Glycosyltransferases [BR:lpd01003]
D AYR62_07850 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D AYR62_07845 glycosyltransferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D AYR62_06515 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AYR62_07260 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D AYR62_02560 acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D AYR62_03255 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AYR62_11995 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AYR62_02605 glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AYR62_02790 putative glycosyltransferase, exosortase G system-associated K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lpd01005]
D AYR62_03255 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AYR62_07955 glucosyl transferase family 2 K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpd01011]
D AYR62_02345 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYR62_03860 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AYR62_03520 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AYR62_07180 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AYR62_04385 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AYR62_07305 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AYR62_03220 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AYR62_02385 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AYR62_12895 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AYR62_07755 hypothetical protein K01776 murI; glutamate racemase [EC:5.1.1.3]
D AYR62_04380 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AYR62_04390 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AYR62_01870 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AYR62_06515 carboxypeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AYR62_07260 penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D AYR62_04375 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D AYR62_06990 penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D AYR62_01350 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_14225 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_03635 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AYR62_10705 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_15350 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_04580 hypothetical protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D AYR62_09335 glycoside hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYR62_01400 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYR62_10105 D-alanyl-D-alanine carboxypeptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D AYR62_02355 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D AYR62_07015 ABC transporter substrate-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AYR62_05170 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:lpd01004]
D AYR62_06885 hypothetical protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AYR62_06900 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AYR62_06875 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AYR62_11670 NAD(P)-dependent dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYR62_06880 beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AYR62_06865 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYR62_06910 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AYR62_02035 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AYR62_06890 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D AYR62_08465 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AYR62_06695 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AYR62_06025 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYR62_06200 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AYR62_04905 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AYR62_06205 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lpd01008]
D AYR62_07295 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:lpd01006]
D AYR62_06795 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AYR62_04955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AYR62_06960 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AYR62_08100 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:lpd01007]
D AYR62_08355 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D AYR62_02150 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AYR62_02200 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AYR62_08345 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AYR62_07270 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AYR62_02235 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AYR62_04430 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AYR62_04005 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AYR62_07495 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AYR62_02470 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AYR62_05180 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AYR62_06530 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AYR62_05175 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AYR62_05770 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AYR62_05775 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AYR62_08815 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AYR62_04970 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AYR62_07145 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AYR62_07795 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AYR62_07025 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AYR62_07020 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AYR62_10850 aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D AYR62_14910 aspartate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D AYR62_09980 amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYR62_10435 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYR62_10785 aspartate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYR62_11660 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D AYR62_10650 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AYR62_06310 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AYR62_11345 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AYR62_10280 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AYR62_03760 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AYR62_10405 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lpd00194]
D AYR62_03850 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AYR62_03845 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AYR62_03840 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AYR62_03835 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AYR62_03830 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AYR62_03825 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AYR62_03820 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AYR62_03815 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lpd03000]
D AYR62_12235 AraC family transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D AYR62_12110 hypothetical protein K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D AYR62_14235 hypothetical protein K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D AYR62_15125 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D AYR62_01115 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D AYR62_03400 hypothetical protein K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D AYR62_01915 hypothetical protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D AYR62_00295 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AYR62_00435 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AYR62_07710 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AYR62_09700 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AYR62_10065 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AYR62_04520 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AYR62_10570 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D AYR62_10635 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D AYR62_12450 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D AYR62_02555 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D AYR62_11775 hypothetical protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AYR62_06245 hypothetical protein K09017 rutR; TetR/AcrR family transcriptional regulator
D AYR62_13315 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AYR62_08750 TetR family transcriptional regulator K18135 nalD; TetR/AcrR family transcriptional regulator, repressor of the mexAB-oprM multidrug resistance operon
D AYR62_05505 transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor
D AYR62_05765 hypothetical protein K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D AYR62_12545 MarR family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D AYR62_00165 MarR family transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D AYR62_08995 hypothetical protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D AYR62_13070 hypothetical protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D AYR62_15055 hypothetical protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D AYR62_05365 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AYR62_07345 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AYR62_00965 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AYR62_12435 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AYR62_14660 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AYR62_05305 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AYR62_05650 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AYR62_06955 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D AYR62_00600 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AYR62_13115 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AYR62_11310 MerR family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D AYR62_13575 hypothetical protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D AYR62_05620 hypothetical protein K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D AYR62_05470 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D AYR62_09110 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D AYR62_09575 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D AYR62_09450 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D AYR62_04545 arginine deiminase K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D AYR62_01565 transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D AYR62_11125 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D AYR62_10925 hypothetical protein K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D AYR62_13200 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D AYR62_08880 Cro/Cl family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D AYR62_08010 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D AYR62_13395 hypothetical protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D AYR62_11825 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D AYR62_08150 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D AYR62_01025 hypothetical protein K07726 K07726; putative transcriptional regulator
D AYR62_12030 hypothetical protein K07726 K07726; putative transcriptional regulator
D AYR62_12195 hypothetical protein K07726 K07726; putative transcriptional regulator
D AYR62_00515 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D AYR62_01300 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYR62_01310 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYR62_04555 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D AYR62_06785 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D AYR62_07265 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D AYR62_05020 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D AYR62_11505 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D AYR62_08760 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D AYR62_08845 PspC family transcriptional regulator K03973 pspC; phage shock protein C
D AYR62_03350 hypothetical protein K03973 pspC; phage shock protein C
D AYR62_03435 SorC family transcriptional regulator K05311 cggR; central glycolytic genes regulator
D AYR62_02005 RNA polymerase subunit sigma-70 K05346 deoR; deoxyribonucleoside regulator
D AYR62_06430 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D AYR62_07160 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D AYR62_04360 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lpd03021]
D AYR62_09525 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D AYR62_08570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AYR62_08745 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AYR62_08740 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AYR62_02335 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D AYR62_06765 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AYR62_05805 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
D AYR62_08325 hypothetical protein K27000 sigH; RNA polymerase sigma-H factor
D AYR62_04985 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D AYR62_06815 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D AYR62_08315 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AYR62_11100 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AYR62_07005 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:lpd03019]
D AYR62_06685 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AYR62_04595 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AYR62_04715 RNase J family beta-CASP ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AYR62_15240 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AYR62_04100 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AYR62_03475 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AYR62_07240 3'-5' exonuclease K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D AYR62_02375 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AYR62_07800 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D AYR62_09965 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYR62_05890 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYR62_14775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_03455 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_05030 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AYR62_08135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYR62_14975 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AYR62_03590 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AYR62_03410 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:lpd03011]
D AYR62_05905 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AYR62_04930 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AYR62_08665 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AYR62_03970 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AYR62_08615 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AYR62_13925 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AYR62_08715 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AYR62_08630 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AYR62_08535 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AYR62_08700 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AYR62_08575 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AYR62_08720 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AYR62_08580 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AYR62_12145 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AYR62_04710 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AYR62_06645 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AYR62_08650 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AYR62_13915 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AYR62_08675 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AYR62_04705 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AYR62_05220 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AYR62_08305 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AYR62_08680 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AYR62_08695 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AYR62_08690 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AYR62_08635 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AYR62_08625 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AYR62_13895 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AYR62_08300 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AYR62_08310 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AYR62_08295 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AYR62_08540 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AYR62_08645 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AYR62_08605 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AYR62_08660 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AYR62_08565 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AYR62_08620 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AYR62_06620 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AYR62_07130 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AYR62_06845 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AYR62_08670 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AYR62_08685 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AYR62_08640 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AYR62_06835 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AYR62_06715 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AYR62_08655 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AYR62_08610 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AYR62_02350 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AYR62_00150 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AYR62_00155 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AYR62_07135 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AYR62_08585 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AYR62_02495 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_02165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_07590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_04150 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_14440 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_14465 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_14430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_02475 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_02155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_04130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_07600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_14455 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_14435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_02160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_02490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_04145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_07595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_14460 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lpd03009]
D AYR62_06685 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AYR62_05250 era; GTPase Era K03595 era; GTPase
D AYR62_04780 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D AYR62_04985 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D AYR62_06815 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D AYR62_08315 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AYR62_02250 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AYR62_06745 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AYR62_04665 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AYR62_05135 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AYR62_01295 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AYR62_04365 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AYR62_08185 rRNA (cytidine-2'-O-)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AYR62_06790 cell division protein FtsJ K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D AYR62_11605 SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D AYR62_08335 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AYR62_13670 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D AYR62_08040 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D AYR62_05875 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AYR62_12390 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AYR62_06435 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AYR62_08940 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AYR62_08165 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AYR62_08170 ribosomal-protein-alanine N-acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AYR62_06630 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D AYR62_05130 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AYR62_07785 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AYR62_08340 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D AYR62_02375 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AYR62_07800 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D AYR62_06730 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AYR62_05910 engA; ribosome biogenesis GTPase Der K03977 engA; GTPase
D AYR62_05975 rbgA; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D AYR62_09075 GTPase HflX K03665 hflX; GTPase
D AYR62_07120 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D AYR62_03800 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AYR62_05145 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AYR62_05005 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D AYR62_04980 ribosome maturation factor K09748 rimP; ribosome maturation factor RimP
D AYR62_13945 RNA-binding protein K14761 rlbA; ribosome-associated protein
D AYR62_07100 ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein
D AYR62_05240 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D AYR62_07115 RNA-binding protein K07574 yhbY; RNA-binding protein
D AYR62_03285 Fis family transcriptional regulator K05808 hpf; ribosome hibernation promoting factor
D AYR62_01320 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D AYR62_07085 DNA-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lpd03016]
D AYR62_04805 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D AYR62_05930 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AYR62_04970 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AYR62_04430 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AYR62_07495 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AYR62_02235 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AYR62_07270 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AYR62_02470 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AYR62_05180 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AYR62_07795 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AYR62_06530 asnC; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AYR62_07145 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AYR62_08815 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AYR62_08345 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AYR62_04005 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AYR62_05175 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AYR62_07025 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AYR62_07020 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AYR62_02150 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AYR62_02200 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AYR62_05150 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D AYR62_07220 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AYR62_07205 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AYR62_08545 tRNA pseudouridine(38,39,40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AYR62_05010 tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AYR62_03985 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_04455 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_03800 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AYR62_06960 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AYR62_13985 tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AYR62_13990 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AYR62_13965 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AYR62_06495 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D AYR62_05770 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AYR62_05775 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AYR62_08355 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D AYR62_12455 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D AYR62_01610 prolyl-tRNA editing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D AYR62_08235 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D AYR62_02465 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D AYR62_06625 tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AYR62_05810 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D AYR62_04345 RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AYR62_07040 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D AYR62_04465 tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AYR62_07825 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AYR62_02795 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AYR62_07820 tgt; tRNA-guanine(34) transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D AYR62_03990 tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AYR62_02445 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AYR62_08175 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AYR62_08160 N(6)-L-threonylcarbamoyladenine synthase TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AYR62_03500 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AYR62_07090 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D AYR62_03475 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:lpd03012]
D AYR62_05000 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AYR62_07140 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AYR62_08155 multidrug ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D AYR62_04935 elongation factor Ts K02357 tsf; elongation factor Ts
D AYR62_04725 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AYR62_08710 fusA; elongation factor G K02355 fusA; elongation factor G
D AYR62_03790 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AYR62_04945 ribosome recycling factor K02838 frr; ribosome recycling factor
D AYR62_03795 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AYR62_02415 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AYR62_08590 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AYR62_06825 elongation factor P K02356 efp; elongation factor P
D AYR62_03295 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D AYR62_07905 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lpd03110]
D AYR62_05825 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AYR62_08755 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D AYR62_07870 ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D AYR62_11695 ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D AYR62_04735 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AYR62_06010 ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D AYR62_05030 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AYR62_08135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYR62_05035 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AYR62_02460 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D AYR62_05025 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AYR62_12530 molecular chaperone K13993 HSP20; HSP20 family protein
D AYR62_12535 molecular chaperone K13993 HSP20; HSP20 family protein
D AYR62_08140 co-chaperone GroES K04078 groES; chaperonin GroES
D AYR62_13675 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D AYR62_02455 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AYR62_03815 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AYR62_07610 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AYR62_07230 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D AYR62_09195 thiol reductase thioredoxin K03671 TXN; thioredoxin
D AYR62_07765 thiol reductase thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:lpd04131]
D AYR62_02880 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYR62_03440 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYR62_01380 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_08380 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_05845 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lpd03032]
D AYR62_09845 hypothetical protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AYR62_06455 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AYR62_05915 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AYR62_13960 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AYR62_13890 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AYR62_05800 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AYR62_07155 hypothetical protein K03346 dnaB; replication initiation and membrane attachment protein
D AYR62_07150 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D AYR62_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AYR62_05840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYR62_04975 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYR62_13955 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYR62_04700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYR62_08195 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYR62_03510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYR62_08225 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYR62_05980 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AYR62_07170 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYR62_08075 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AYR62_13930 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AYR62_13935 gyrB; DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AYR62_06035 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AYR62_06030 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AYR62_05990 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AYR62_16180 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lpd03036]
D AYR62_06685 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AYR62_05915 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AYR62_13960 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AYR62_01755 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D AYR62_06680 hypothetical protein K03529 smc; chromosome segregation protein
D AYR62_05865 hypothetical protein K05896 scpA; segregation and condensation protein A
D AYR62_05870 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D AYR62_04400 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AYR62_02435 hypothetical protein K13052 divIC; cell division protein DivIC
D AYR62_04350 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AYR62_07185 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AYR62_04370 hypothetical protein K03586 ftsL; cell division protein FtsL
D AYR62_04395 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D AYR62_04655 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AYR62_04405 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AYR62_07775 cell division protein FtsZ K09888 zapA; cell division protein ZapA
D AYR62_05170 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AYR62_03980 septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D AYR62_04030 cell division inhibitor K03610 minC; septum site-determining protein MinC
D AYR62_04035 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AYR62_04425 cell division protein DivIVA K04074 divIVA; cell division initiation protein
D AYR62_04410 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D AYR62_03865 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AYR62_04015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AYR62_04020 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D AYR62_04025 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AYR62_03880 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D AYR62_01305 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D AYR62_15775 peptide transporter K03496 parA; chromosome partitioning protein
D AYR62_16125 peptide transporter K03496 parA; chromosome partitioning protein
D AYR62_15685 ATPase K03496 parA; chromosome partitioning protein
D AYR62_15860 ATPase K03496 parA; chromosome partitioning protein
D AYR62_16525 ATPase K03496 parA; chromosome partitioning protein
D AYR62_01300 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYR62_01310 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYR62_06035 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AYR62_06030 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AYR62_13990 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AYR62_01295 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AYR62_06000 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D AYR62_05855 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D AYR62_02765 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D AYR62_04740 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D AYR62_03420 sporulation regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lpd03400]
D AYR62_00115 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AYR62_03490 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AYR62_05125 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D AYR62_09525 ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D AYR62_06480 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AYR62_15540 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AYR62_08370 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AYR62_12235 AraC family transcriptional regulator K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
D AYR62_12230 hypothetical protein K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AYR62_10415 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AYR62_05735 DNA repair protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AYR62_03940 hypothetical protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AYR62_03515 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AYR62_05210 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AYR62_04815 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AYR62_08075 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AYR62_07170 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AYR62_03390 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A
D AYR62_03385 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AYR62_04775 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D AYR62_08080 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_08990 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_09030 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AYR62_08745 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AYR62_08740 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AYR62_08570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AYR62_02335 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D AYR62_06765 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AYR62_02420 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AYR62_04110 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AYR62_07770 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D AYR62_04115 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D AYR62_06805 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AYR62_06800 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AYR62_05840 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AYR62_04975 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D AYR62_13955 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AYR62_04700 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AYR62_08195 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AYR62_03510 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AYR62_08225 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AYR62_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AYR62_04485 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AYR62_04095 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D AYR62_07835 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AYR62_07830 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AYR62_06755 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AYR62_06280 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D AYR62_06285 exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D AYR62_08365 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AYR62_13940 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D AYR62_06700 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AYR62_01020 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AYR62_05255 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AYR62_08215 recombination protein RecR K06187 recR; recombination protein RecR
D AYR62_06780 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D AYR62_06510 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D AYR62_14400 helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D AYR62_14395 ATP-dependent helicase K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D AYR62_11550 subtype II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D AYR62_13930 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AYR62_13935 gyrB; DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AYR62_05990 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AYR62_05915 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AYR62_09965 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYR62_05890 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AYR62_07810 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D AYR62_11730 excinuclease ABC subunit A K03502 umuC; DNA polymerase V
D AYR62_04875 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AYR62_15850 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D AYR62_07935 hypothetical protein K03565 recX; regulatory protein
D AYR62_06545 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AYR62_08245 ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AYR62_08250 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AYR62_01465 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D AYR62_07805 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lpd03029]
D AYR62_05000 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AYR62_07140 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AYR62_04935 elongation factor Ts K02357 tsf; elongation factor Ts
D AYR62_04725 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AYR62_08710 fusA; elongation factor G K02355 fusA; elongation factor G
D AYR62_05250 era; GTPase Era K03595 era; GTPase
D AYR62_02150 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AYR62_07495 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AYR62_05180 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AYR62_07270 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AYR62_08055 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AYR62_08050 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AYR62_08060 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AYR62_13920 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AYR62_05030 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AYR62_05025 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AYR62_08135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYR62_08140 co-chaperone GroES K04078 groES; chaperonin GroES
D AYR62_05035 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AYR62_03985 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_04455 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_13970 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYR62_07050 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lpd02000]
D AYR62_04895 multidrug ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_04900 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_12415 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYR62_16390 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYR62_09600 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_11580 multidrug ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_11585 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AYR62_08105 amino acid ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AYR62_08110 thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AYR62_09875 hypothetical protein K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
D AYR62_05935 multidrug ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D AYR62_08480 hypothetical protein K15551 tauA; taurine transport system substrate-binding protein
D AYR62_08485 taurine ABC transporter permease K15552 tauC; taurine transport system permease protein
D AYR62_08475 ABC transporter ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D AYR62_10810 ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D AYR62_10780 ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D AYR62_10775 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AYR62_10770 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AYR62_09470 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D AYR62_09465 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D AYR62_09460 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D AYR62_09455 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D AYR62_00030 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYR62_11150 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYR62_07965 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D AYR62_11145 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D AYR62_11155 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D AYR62_11160 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AYR62_07970 hypothetical protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AYR62_06235 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AYR62_06240 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AYR62_11285 glycerol-3-phosphate ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AYR62_11280 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AYR62_11290 glycerol-3-phosphate ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AYR62_10730 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AYR62_03320 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AYR62_10735 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AYR62_03325 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AYR62_10740 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AYR62_03330 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AYR62_10745 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AYR62_03335 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AYR62_03340 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AYR62_12850 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AYR62_12860 phosphonate ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D AYR62_12865 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D AYR62_12855 phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AYR62_11395 peptide ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D AYR62_09090 glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D AYR62_09080 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D AYR62_09085 glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D AYR62_09095 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D AYR62_09895 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AYR62_09900 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D AYR62_04765 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D AYR62_04770 glnQ; glutamine ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D AYR62_14345 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AYR62_14340 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AYR62_14335 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AYR62_14330 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AYR62_09630 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AYR62_03900 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AYR62_09635 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AYR62_03895 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AYR62_09640 phosphate ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AYR62_03890 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AYR62_09180 branched-chain amino acid ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D AYR62_09185 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D AYR62_10860 ABC transporter substrate-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D AYR62_10830 amino acid permease K16962 yxeN; putative S-methylcysteine transport system permease protein
D AYR62_04055 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AYR62_04045 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AYR62_09065 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09070 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09960 hypothetical protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_10970 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_11845 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_01710 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_01815 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_00945 peptide ABC transpoter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AYR62_09060 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D AYR62_09055 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D AYR62_09050 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D AYR62_09045 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AYR62_14540 iron ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D AYR62_14530 ferrichrome ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D AYR62_14535 ferrichrome ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D AYR62_14525 ABC transporter K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D AYR62_12160 heme ABC transporter substrate-binding protein IsdE K25113 htsA; heme transport system substrate-binding protein
D AYR62_12155 iron ABC transporter permease K25114 htsB; heme transport system permease protein
D AYR62_12150 cobalamin ABC transporter ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D AYR62_12165 hypothetical protein K25118 isdC; iron-regulated surface determinant protein C
D AYR62_00630 peptide ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AYR62_00670 peptide ABC transporter substrate-binding protein K02015 ABC.FEV.P; iron complex transport system permease protein
D AYR62_00665 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AYR62_14040 molybdenum ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AYR62_11830 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component
D AYR62_12320 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D AYR62_09315 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D AYR62_12330 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D AYR62_08550 cobalt ABC transporter ATP-binding protein K16785 ecfT; energy-coupling factor transport system permease protein
D AYR62_08560 cbiO; energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYR62_08555 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYR62_12325 cobalt ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYR62_09310 hypothetical protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D AYR62_09305 ABC transporter permease K16925 ykoE; energy-coupling factor transport system permease protein
D AYR62_11560 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D AYR62_12140 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D AYR62_02275 ABC transporter K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D AYR62_02270 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D AYR62_13030 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D AYR62_05200 Teichoic acid translocation permease TagG K09692 tagG; teichoic acid transport system permease protein
D AYR62_03570 teichoic acid ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D AYR62_06250 ABC transporter permease K25149 narB; polyether ionophore transport system permease protein
D AYR62_07210 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D AYR62_07215 multidrug ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D AYR62_13530 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYR62_00425 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYR62_00910 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYR62_09690 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYR62_12395 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYR62_14130 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AYR62_00905 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYR62_00430 glycosyl transferase family 2 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYR62_09680 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYR62_12400 sodium ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYR62_14125 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYR62_01545 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYR62_03920 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AYR62_02040 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AYR62_02715 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AYR62_03910 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AYR62_07900 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AYR62_11790 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AYR62_01890 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AYR62_02045 hemin ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AYR62_02720 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AYR62_00350 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D AYR62_06380 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AYR62_13620 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D AYR62_10530 MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D AYR62_09560 L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D AYR62_15600 L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D AYR62_11805 alpha-ketoglutarate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D AYR62_15120 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D AYR62_15210 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D AYR62_15205 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D AYR62_12905 hypothetical protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D AYR62_06190 cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D AYR62_00695 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D AYR62_14020 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AYR62_05360 MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D AYR62_14070 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D AYR62_01960 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D AYR62_09005 multidrug transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D AYR62_13905 multidrug MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D AYR62_12755 multidrug transporter K18936 mdeA; MFS transporter, DHA2 family, multidrug resistance protein
D AYR62_16370 multidrug transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D AYR62_12010 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D AYR62_14825 MFS transporter permease K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D AYR62_07855 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AYR62_04855 hypothetical protein K02784 ptsH; phosphocarrier protein HPr
D AYR62_07860 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AYR62_11965 hypothetical protein K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AYR62_02510 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AYR62_08410 PTS fructose transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D AYR62_08415 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AYR62_08405 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D AYR62_08400 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D AYR62_11005 hypothetical protein K06188 aqpZ; aquaporin Z
D AYR62_10250 aquaporin K02440 glpF; glycerol uptake facilitator
D AYR62_11515 aquaporin K02440 glpF; glycerol uptake facilitator
D AYR62_03155 glycerol transporter K02440 glpF; glycerol uptake facilitator
D AYR62_06485 ammonia permease K03320 amt; ammonium transporter, Amt family
D AYR62_07365 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D AYR62_07735 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel
D AYR62_03625 hypothetical protein K06199 crcB; fluoride exporter
D AYR62_03630 hypothetical protein K06199 crcB; fluoride exporter
D AYR62_11870 heavy metal-binding protein K08364 merP; periplasmic mercuric ion binding protein
D AYR62_05115 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D AYR62_13505 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D AYR62_13860 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D AYR62_13155 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D AYR62_14915 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D AYR62_04760 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D AYR62_12580 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AYR62_01245 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D AYR62_01790 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D AYR62_03250 murein hydrolase regulator LrgA K05338 lrgA; holin-like protein
D AYR62_10240 ethanolamine utilization protein EutM K27260 pduA; bacterial microcompartment shell protein
D AYR62_00440 PTS sugar transporter subunit IIA K16209 lacS; lactose/raffinose/galactose permease
D AYR62_14630 sodium:solute symporter K16209 lacS; lactose/raffinose/galactose permease
D AYR62_02095 sodium:solute symporter K16209 lacS; lactose/raffinose/galactose permease
D AYR62_00290 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D AYR62_12220 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D AYR62_15650 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D AYR62_08830 gamma-aminobutyrate permease K11733 lysP; lysine-specific permease
D AYR62_11370 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D AYR62_04550 arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D AYR62_15740 amino acid:proton antiporter K20265 gadC; glutamate:GABA antiporter
D AYR62_08885 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D AYR62_13325 supressor protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D AYR62_09885 hypothetical protein K11814 ebrA; multidrug resistance protein EbrA
D AYR62_13370 glucose transporter K05340 glcU; glucose uptake protein
D AYR62_05580 sugar transporter K05340 glcU; glucose uptake protein
D AYR62_06400 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D AYR62_01750 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D AYR62_08020 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D AYR62_14475 transporter K11102 gltP; proton glutamate symport protein
D AYR62_00325 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D AYR62_01575 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D AYR62_15260 hypothetical protein K24163 nhaK; monovalent cation/hydrogen antiporter
D AYR62_03525 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D AYR62_09130 sodium:proton antiporter K26730 napA; Na+:H+ antiporter
D AYR62_02190 sodium:proton antiporter K26730 napA; Na+:H+ antiporter
D AYR62_09865 Trk family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D AYR62_09870 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein
D AYR62_08900 uracil permease K02824 uraA; uracil permease
D AYR62_01285 permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D AYR62_01795 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D AYR62_01275 nucleoside permease K16323 yxjA; purine nucleoside transport protein
D AYR62_03460 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D AYR62_09435 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D AYR62_03165 nickel permease K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D AYR62_14690 divalent metal cation transporter K03322 mntH; manganese transport protein
D AYR62_09380 malate transporter K13936 mdcF; malonate transporter and related proteins
D AYR62_00145 hypothetical protein K24180 mleP; malate permease and related proteins
D AYR62_08385 malate transporter K24180 mleP; malate permease and related proteins
D AYR62_01470 transporter K24180 mleP; malate permease and related proteins
D AYR62_12590 hypothetical protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D AYR62_05280 hypothetical protein K11249 eamB; cysteine/O-acetylserine efflux protein
D AYR62_01355 branched-chain amino acid ABC transporter K26605 azlC; branched chain amino acid efflux pump
D AYR62_01945 azaleucine resistance protein AzlC K26605 azlC; branched chain amino acid efflux pump
D AYR62_01360 branched-chain amino acid transporter K26606 azlD; branched chain amino acid efflux pump
D AYR62_01950 branched-chain amino acid ABC transporter K26606 azlD; branched chain amino acid efflux pump
D AYR62_05880 hypothetical protein K23675 fmnP; riboflavin transporter
D AYR62_11450 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D AYR62_11445 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D AYR62_04655 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AYR62_16255 hypothetical protein K03646 tolA; colicin import membrane protein
D AYR62_00780 narZ; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_00785 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_00795 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D AYR62_02950 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D AYR62_02945 exopolysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D AYR62_00835 iron transporter FeoA K04758 feoA; ferrous iron transport protein A
D AYR62_00830 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:lpd02044]
D AYR62_04415 cell division protein K02221 yggT; YggT family protein
D AYR62_04680 hypothetical protein K02237 comEA; competence protein ComEA
D AYR62_04690 hypothetical protein K02238 comEC; competence protein ComEC
D AYR62_04695 hypothetical protein K02238 comEC; competence protein ComEC
D AYR62_03275 hypothetical protein K02240 comFA; competence protein ComFA
D AYR62_03280 hypothetical protein K02242 comFC; competence protein ComFC
D AYR62_07690 hypothetical protein K02243 comGA; competence protein ComGA
D AYR62_07685 hypothetical protein K02244 comGB; competence protein ComGB
D AYR62_07680 hypothetical protein K02245 comGC; competence protein ComGC
D AYR62_07670 hypothetical protein K02246 comGD; competence protein ComGD
D AYR62_08725 hypothetical protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AYR62_03290 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AYR62_08320 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AYR62_03465 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AYR62_08600 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AYR62_06665 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AYR62_06675 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AYR62_07815 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AYR62_13970 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AYR62_07050 OxaA precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:lpd02042]
D AYR62_12580 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AYR62_05950 hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lpd02022]
D AYR62_03315 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AYR62_03310 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D AYR62_13705 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AYR62_13710 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D AYR62_11210 two-component sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D AYR62_11215 DNA-binding response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D AYR62_07065 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D AYR62_03705 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AYR62_00405 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_00730 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_15325 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D AYR62_00400 DNA-binding response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D AYR62_14045 hypothetical protein K07696 nreC; two-component system, NarL family, response regulator NreC
D AYR62_15320 DNA-binding response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D AYR62_11795 hypothetical protein K11623 ydfH; two-component system, NarL family, sensor histidine kinase YdfH [EC:2.7.13.3]
D AYR62_11800 hypothetical protein K11624 ydfI; two-component system, NarL family, response regulator YdfI
D AYR62_12275 histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D AYR62_12280 hypothetical protein K07719 glnL; two-component system, response regulator GlnL
C 02035 Bacterial motility proteins [BR:lpd02035]
D AYR62_09895 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lpd04812]
D AYR62_03865 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AYR62_04015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AYR62_15970 StbA K18640 parM; plasmid segregation protein ParM
D AYR62_04405 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AYR62_04400 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AYR62_04030 cell division inhibitor K03610 minC; septum site-determining protein MinC
D AYR62_04035 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AYR62_01305 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D AYR62_15775 peptide transporter K03496 parA; chromosome partitioning protein
D AYR62_16125 peptide transporter K03496 parA; chromosome partitioning protein
D AYR62_15685 ATPase K03496 parA; chromosome partitioning protein
D AYR62_15860 ATPase K03496 parA; chromosome partitioning protein
D AYR62_16525 ATPase K03496 parA; chromosome partitioning protein
D AYR62_01300 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AYR62_01310 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lpd04147]
D AYR62_14775 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_03455 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AYR62_02880 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYR62_03440 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AYR62_03445 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AYR62_05845 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AYR62_08135 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AYR62_05030 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AYR62_03720 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AYR62_01330 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AYR62_04725 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AYR62_07220 histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AYR62_00915 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_02410 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D AYR62_08465 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AYR62_14420 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AYR62_08595 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AYR62_01800 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AYR62_04820 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AYR62_04755 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AYR62_04750 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AYR62_09715 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AYR62_00495 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AYR62_06585 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AYR62_06950 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AYR62_10285 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AYR62_09805 hypothetical protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10410 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_10615 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AYR62_07445 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AYR62_04630 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AYR62_14550 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AYR62_03450 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AYR62_01380 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AYR62_08380 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lpd02048]
D AYR62_11550 subtype II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D AYR62_11545 CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D AYR62_11555 hypothetical protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D AYR62_14080 hypothetical protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D AYR62_16215 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D AYR62_15695 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AYR62_15890 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AYR62_16210 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AYR62_16305 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AYR62_16460 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AYR62_15690 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AYR62_16200 restriction endonuclease K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AYR62_16205 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AYR62_16455 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AYR62_13760 endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D AYR62_10550 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AYR62_15700 growth inhibitor PemK K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AYR62_16300 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AYR62_16465 growth inhibitor PemK K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AYR62_02395 PemK family transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AYR62_15705 PbsX family transcriptional regulator K07172 mazE; antitoxin MazE
D AYR62_00515 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D AYR62_16365 addiction module toxin RelE K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D AYR62_16425 addiction module toxin RelE K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D AYR62_00615 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D AYR62_15990 damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D AYR62_16140 damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D AYR62_14085 hypothetical protein K19159 yefM; antitoxin YefM
D AYR62_00885 prevent-host-death protein K19159 yefM; antitoxin YefM
D AYR62_16360 prevent-host-death family protein K19159 yefM; antitoxin YefM
D AYR62_16430 prevent-host-death family protein K19159 yefM; antitoxin YefM
D AYR62_09655 toxin HicA K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D AYR62_08845 PspC family transcriptional regulator K03973 pspC; phage shock protein C
D AYR62_03350 hypothetical protein K03973 pspC; phage shock protein C
D AYR62_14095 transcriptional regulator K21498 higA-1; antitoxin HigA-1
D AYR62_04405 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AYR62_03865 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AYR62_04015 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AYR62_06035 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AYR62_06030 gyrB; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AYR62_03985 aminotransferase V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AYR62_04455 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lpd01504]
D AYR62_09875 hypothetical protein K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
D AYR62_16370 multidrug transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D AYR62_15175 chloramphenicol acetyltransferase CAT K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D AYR62_01760 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AYR62_04570 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AYR62_10705 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_15350 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D AYR62_01665 D-alanine--poly(phosphoribitol) ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D AYR62_01670 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D AYR62_01190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01675 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D AYR62_01195 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D AYR62_01680 hypothetical protein K03740 dltD; D-alanine transfer protein
D AYR62_01180 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D AYR62_00600 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AYR62_13115 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AYR62_12415 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYR62_16390 multidrug ABC transporter permease K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D AYR62_00165 MarR family transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D AYR62_08995 hypothetical protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D AYR62_13070 hypothetical protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D AYR62_15055 hypothetical protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lpd03100]
D AYR62_02485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYR62_04140 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AYR62_04180 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_03430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_07985 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_08780 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_06930 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_15390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AYR62_02500 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYR62_03580 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AYR62_07570 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYR62_04210 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYR62_04245 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AYR62_07540 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AYR62_02530 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYR62_03745 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYR62_07545 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYR62_02540 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AYR62_07580 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYR62_03750 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYR62_04235 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AYR62_04170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_04220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_08765 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_08790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_07280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AYR62_00935 tRNA-His K14226 tRNA-His; tRNA His
D AYR62_07550 tRNA-His K14226 tRNA-His; tRNA His
D AYR62_04135 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYR62_04225 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYR62_02480 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AYR62_04175 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_08425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_08785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_08800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_02180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_07340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_07535 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AYR62_13715 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYR62_08805 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYR62_04160 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AYR62_04205 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYR62_04190 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYR62_04195 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYR62_04240 tRNA-Met K14230 tRNA-Met; tRNA Met
D AYR62_07565 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AYR62_04215 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AYR62_02175 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYR62_04185 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYR62_08775 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AYR62_04230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYR62_04200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYR62_07585 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYR62_04825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AYR62_08795 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_02505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_08770 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_04165 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_02170 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AYR62_07555 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AYR62_02525 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYR62_02535 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYR62_07560 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AYR62_07575 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYR62_08810 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYR62_04155 tRNA-Val K14237 tRNA-Val; tRNA Val
D AYR62_14430 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_02475 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_02155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_04130 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_07600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_14455 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AYR62_14435 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_02160 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_02490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_04145 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_07595 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_14460 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AYR62_02495 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_02165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_07590 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_04150 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_14440 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_14465 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AYR62_08230 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D AYR62_06495 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D AYR62_03695 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AYR62_05565 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AYR62_01435 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AYR62_01430 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AYR62_11700 oxidoreductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D AYR62_10845 hypothetical protein K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D AYR62_01940 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D AYR62_04515 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D AYR62_01700 lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D AYR62_13685 hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D AYR62_12650 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AYR62_01595 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AYR62_05270 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AYR62_05740 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AYR62_05380 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AYR62_11770 hypothetical protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AYR62_12960 hypothetical protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AYR62_14610 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AYR62_05185 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AYR62_06060 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AYR62_06055 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AYR62_10870 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D AYR62_10915 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D AYR62_15010 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D AYR62_01855 NAD(FAD)-dependent dehydrogenase K05910 npr; NADH peroxidase [EC:1.11.1.1]
D AYR62_04000 2-Cys peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AYR62_13635 dihydroneopterin aldolase K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AYR62_03610 dihydroneopterin aldolase K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AYR62_02015 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D AYR62_09260 ferredoxin--NADP(+) reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D AYR62_03195 hypothetical protein K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D AYR62_05670 oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D AYR62_12200 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D AYR62_06490 RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D AYR62_15735 putrescine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D AYR62_00865 transaldolase K00617 sftT; 6-deoxy-6-sulfo-D-fructose transaldolase [EC:2.2.1.14]
D AYR62_08920 acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D AYR62_09830 galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D AYR62_14735 maltose acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D AYR62_06270 acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D AYR62_10825 acetyltransferase K00680 ytmI; uncharacterized N-acetyltransferase [EC:2.3.1.-]
D AYR62_10905 acetyltransferase K00680 ytmI; uncharacterized N-acetyltransferase [EC:2.3.1.-]
D AYR62_11905 hypothetical protein K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D AYR62_11500 hypothetical protein K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D AYR62_03145 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D AYR62_03365 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AYR62_12115 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D AYR62_15145 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D AYR62_06705 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D AYR62_05215 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D AYR62_00985 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_07055 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_07235 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_07430 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_08115 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_08825 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_08350 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_08705 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_09295 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_09550 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_09915 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_10050 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_10600 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_10605 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_10980 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_11430 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_11575 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_11600 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_12255 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_12365 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_14290 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_14470 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_15245 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_16345 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_03125 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_03240 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_03300 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_04250 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_04040 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_04470 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_04535 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_06140 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_06465 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AYR62_01455 hypothetical protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D AYR62_03535 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D AYR62_03360 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D AYR62_10425 hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D AYR62_03470 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D AYR62_06155 penicillin-binding protein K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D AYR62_09345 RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D AYR62_00470 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D AYR62_10135 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D AYR62_07125 HAD family hydrolase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D AYR62_13900 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D AYR62_13605 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AYR62_02240 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AYR62_02245 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D AYR62_00880 alpha-glucosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199]
D AYR62_01720 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AYR62_04610 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AYR62_02615 polysaccharide deacetylase K21478 icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
D AYR62_13830 hypothetical protein K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D AYR62_13840 amidohydrolase K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D AYR62_14755 amidohydrolase K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D AYR62_10920 phenolic acid decarboxylase padC K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D AYR62_14575 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D AYR62_07415 carbohydrate kinase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D AYR62_03160 lactate racemization operon protein LarE K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D AYR62_03150 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D AYR62_15370 NAD(P)H-hydrate epimerase K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6]
D AYR62_07300 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D AYR62_16310 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D AYR62_04275 ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D AYR62_02575 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D AYR62_11865 HAD family hydrolase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D AYR62_12520 magnesium-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D AYR62_14415 hypothetical protein K06206 sfsA; sugar fermentation stimulation protein A
D AYR62_14325 hypothetical protein K04767 acuB; acetoin utilization protein AcuB
D AYR62_10215 diol dehydratase reactivase subunit alpha K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D AYR62_10210 propanediol dehydratase K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D AYR62_00365 FeS assembly scaffold SufA K04488 iscU; nitrogen fixation protein NifU and related proteins
D AYR62_13125 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D AYR62_06405 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D AYR62_05955 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D AYR62_10090 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D AYR62_14895 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D AYR62_12600 ribonucleotide reductase assembly protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D AYR62_13140 deoxyribonuclease K15051 endA; DNA-entry nuclease
D AYR62_13320 DNA-entry nuclease K15051 endA; DNA-entry nuclease
D AYR62_14300 hypothetical protein K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D AYR62_10125 ethanolamine utilization protein EutP K04029 eutP; ethanolamine utilization protein EutP
D AYR62_10150 propanediol utilization protein K04031 eutS; ethanolamine utilization protein EutS
D AYR62_14720 bleomycin resistance protein K08234 yaeR; glyoxylase I family protein
C 99986 Glycan metabolism
D AYR62_07840 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D AYR62_05860 RibT protein K02859 ribT; riboflavin biosynthesis RibT protein
D AYR62_00760 hypothetical protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D AYR62_10445 glyoxalase K15975 K15975; glyoxalase family protein
D AYR62_09240 glyoxalase K15975 K15975; glyoxalase family protein
D AYR62_10450 hypothetical protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AYR62_09920 cold-shock protein K03704 cspA; cold shock protein
D AYR62_13720 cold-shock protein K03704 cspA; cold shock protein
D AYR62_04435 hypothetical protein K03704 cspA; cold shock protein
D AYR62_15265 transcriptional regulator K16509 spxA; regulatory protein spx
D AYR62_04290 transcriptional regulator Spx K16509 spxA; regulatory protein spx
D AYR62_08445 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D AYR62_07605 general stress protein K07570 GSP13; general stress protein 13
D AYR62_02440 RNA-binding protein S1 K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D AYR62_04730 tig; trigger factor K03545 tig; trigger factor
D AYR62_03480 SsrA-binding protein K03664 smpB; SsrA-binding protein
D AYR62_08240 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH
D AYR62_11470 osmotically inducible protein OsmC K07397 yhfA; putative redox protein
D AYR62_04295 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D AYR62_12240 hypothetical protein K07457 K07457; endonuclease III related protein
D AYR62_04915 hypothetical protein K07461 K07461; putative endonuclease
D AYR62_16330 hypothetical protein K04096 smf; DNA processing protein
D AYR62_05985 hypothetical protein K04096 smf; DNA processing protein
D AYR62_06525 XRE family transcriptional regulator K02086 dnaD; DNA replication protein
D AYR62_15915 terminase K07474 xtmA; phage terminase small subunit
D AYR62_14015 AAA family ATPase K07478 ycaJ; putative ATPase
D AYR62_14370 transposase K07482 K07482; transposase, IS30 family
D AYR62_15965 transposase K07482 K07482; transposase, IS30 family
D AYR62_16055 integrase K07482 K07482; transposase, IS30 family
D AYR62_16145 transposase K07482 K07482; transposase, IS30 family
D AYR62_01060 transposase K07484 K07484; transposase
D AYR62_00820 transposase K07484 K07484; transposase
D AYR62_08285 transposase K07484 K07484; transposase
D AYR62_12500 transposase K07484 K07484; transposase
D AYR62_16030 transposase K07484 K07484; transposase
D AYR62_01975 transposase K07484 K07484; transposase
D AYR62_01985 hypothetical protein K07484 K07484; transposase
D AYR62_03035 transposase K07484 K07484; transposase
D AYR62_03045 hypothetical protein K07484 K07484; transposase
D AYR62_02295 hypothetical protein K07484 K07484; transposase
D AYR62_02300 transposase K07484 K07484; transposase
D AYR62_04260 transposase K07484 K07484; transposase
D AYR62_16530 transposase K07491 rayT; REP-associated tyrosine transposase
D AYR62_01185 transposase K07493 K07493; putative transposase
D AYR62_15675 transposase K07493 K07493; putative transposase
D AYR62_16105 transposase K07493 K07493; putative transposase
D AYR62_15425 transposase K07496 K07496; putative transposase
D AYR62_15670 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D AYR62_08220 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AYR62_00870 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D AYR62_11620 Na+/xyloside symporter related transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D AYR62_07645 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family
D AYR62_11425 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family
D AYR62_03770 D-alanine/D-serine/glycine permease K03293 TC.AAT; amino acid transporter, AAT family
D AYR62_09125 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D AYR62_01705 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D AYR62_02075 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D AYR62_07275 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D AYR62_09825 glycine/betaine ABC transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D AYR62_02515 peptide ABC transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D AYR62_12000 branched-chain amino acid ABC transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D AYR62_13060 branched-chain amino acid transporter II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D AYR62_14365 branched-chain amino acid ABC transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D AYR62_14065 symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D AYR62_08895 hypothetical protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D AYR62_15530 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D AYR62_01110 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D AYR62_13980 RNA-binding protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D AYR62_04650 GTP-binding protein TypA K06207 typA; GTP-binding protein
D AYR62_11340 hypothetical protein K07166 K07166; ACT domain-containing protein
D AYR62_05235 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D AYR62_08005 hypothetical protein K07273 acm; lysozyme
D AYR62_10440 1,4-beta-N-acetylmuramidase K07273 acm; lysozyme
D AYR62_15435 lysozyme K07273 acm; lysozyme
D AYR62_10235 microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein
D AYR62_10200 ethanolamine utilization protein EutM K27266 pduJ; bacterial microcompartment shell protein
D AYR62_10205 hypothetical protein K27267 pduK; bacterial microcompartment shell protein
D AYR62_10190 hypothetical protein K27268 pduM; bacterial microcompartment assembly protein
D AYR62_10185 ethanolamine utilization protein EutN K27269 pduN; bacterial microcompartment shell vertex protein
C 99994 Others
D AYR62_10755 hypothetical protein K02039 phoU; phosphate transport system protein
D AYR62_04335 hypothetical protein K06201 cutC; copper homeostasis protein
D AYR62_11120 hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AYR62_12125 GCN5 family acetyltransferase K02348 elaA; ElaA protein
D AYR62_14665 GNAT family acetyltransferase K02348 elaA; ElaA protein
D AYR62_04300 hypothetical protein K06198 coiA; competence protein CoiA
D AYR62_07190 tRNA-binding protein K06878 K06878; tRNA-binding protein
D AYR62_09220 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D AYR62_09780 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D AYR62_13350 hypothetical protein K07001 K07001; NTE family protein
D AYR62_04925 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D AYR62_00370 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D AYR62_00355 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D AYR62_00625 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D AYR62_07945 hypothetical protein K07058 K07058; membrane protein
D AYR62_15420 hypothetical protein K11477 glcG; glc operon protein GlcG
D AYR62_11655 hypothetical protein K03744 lemA; LemA protein
D AYR62_08440 SprT family protein K03095 sprL; SprT-like protein
D AYR62_14815 cytochrome O ubiquinol oxidase K03975 dedA; membrane-associated protein
D AYR62_07615 cytochrome O ubiquinol oxidase K03975 dedA; membrane-associated protein
D AYR62_13515 hypothetical protein K01421 yhgE; putative membrane protein
D AYR62_13525 hypothetical protein K01421 yhgE; putative membrane protein
D AYR62_03685 hypothetical protein K01421 yhgE; putative membrane protein
D AYR62_03355 hypothetical protein K08972 K08972; putative membrane protein
D AYR62_03210 hypothetical protein K08987 K08987; putative membrane protein
D AYR62_00500 hypothetical protein K08996 yagU; putative membrane protein
C 99997 Function unknown
D AYR62_02320 hypothetical protein K06885 K06885; uncharacterized protein
D AYR62_00465 hydrolase K06889 K06889; uncharacterized protein
D AYR62_15195 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D AYR62_15235 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D AYR62_02265 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D AYR62_05755 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D AYR62_07175 hypothetical protein K06890 K06890; uncharacterized protein
D AYR62_12460 phosphohydrolase K06950 K06950; uncharacterized protein
D AYR62_07035 hydrolase K06950 K06950; uncharacterized protein
D AYR62_06640 RNA-binding protein K06960 K06960; uncharacterized protein
D AYR62_08330 DNA-binding protein K06962 K06962; uncharacterized protein
D AYR62_09760 peptidase K06973 K06973; uncharacterized protein
D AYR62_11250 hypothetical protein K07005 K07005; uncharacterized protein
D AYR62_11255 hypothetical protein K07005 K07005; uncharacterized protein
D AYR62_13450 hypothetical protein K07006 K07006; uncharacterized protein
D AYR62_13640 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D AYR62_12990 glyoxalase K07032 K07032; uncharacterized protein
D AYR62_10485 hypothetical protein K07035 K07035; uncharacterized protein
D AYR62_13455 hypothetical protein K07045 K07045; uncharacterized protein
D AYR62_14650 hypothetical protein K07045 K07045; uncharacterized protein
D AYR62_01690 o-pyrocatechuate decarboxylase K07045 K07045; uncharacterized protein
D AYR62_05310 hypothetical protein K07045 K07045; uncharacterized protein
D AYR62_06470 nitroreductase K07078 K07078; uncharacterized protein
D AYR62_13430 permease K07090 K07090; uncharacterized protein
D AYR62_15060 hypothetical protein K07090 K07090; uncharacterized protein
D AYR62_02710 hypothetical protein K07090 K07090; uncharacterized protein
D AYR62_05095 permease K07090 K07090; uncharacterized protein
D AYR62_08855 permease K07090 K07090; uncharacterized protein
D AYR62_07745 hypothetical protein K07095 K07095; uncharacterized protein
D AYR62_01605 DNA-binding protein K07105 K07105; uncharacterized protein
D AYR62_00475 hypothetical protein K07118 K07118; uncharacterized protein
D AYR62_15000 hypothetical protein K07118 K07118; uncharacterized protein
D AYR62_05425 oxidoreductase K07124 K07124; uncharacterized protein
D AYR62_13885 hypothetical protein K07149 K07149; uncharacterized protein
D AYR62_05510 hypothetical protein K07149 K07149; uncharacterized protein
D AYR62_14710 hypothetical protein K07150 K07150; uncharacterized protein
D AYR62_03870 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D AYR62_02770 hypothetical protein K09004 K09004; uncharacterized protein
D AYR62_05225 hypothetical protein K09117 K09117; uncharacterized protein
D AYR62_11335 hypothetical protein K09157 K09157; uncharacterized protein
D AYR62_10885 hypothetical protein K09164 K09164; uncharacterized protein
D AYR62_10910 hypothetical protein K09164 K09164; uncharacterized protein
D AYR62_04270 DNA replication initiation protein K09384 K09384; uncharacterized protein
D AYR62_06670 DNA-binding protein K09787 K09787; uncharacterized protein
D AYR62_05850 DNA-binding protein K00243 K00243; uncharacterized protein
D AYR62_05320 hypothetical protein K09861 K09861; uncharacterized protein
D AYR62_04885 hypothetical protein K09976 K09976; uncharacterized protein
D AYR62_06840 hypothetical protein K07584 ysxB; uncharacterized protein
D AYR62_07930 hypothetical protein K07586 ygaC; uncharacterized protein
D AYR62_04990 DNA-binding protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 28, 2024