+E Transcription factors KO
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Transcription Factors - Lactiplantibacillus pentosus
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
D BB562_03610 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
D BB562_07035 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D BB562_16215 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BB562_06205 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BB562_15785 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BB562_15830 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BB562_03105 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D BB562_00820 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D BB562_16090 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D BB562_01170 trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D BB562_03230 GntR family transcriptional regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D BB562_03850 GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D BB562_02285 transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D BB562_00670 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D BB562_14185 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D BB562_04310 aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D BB562_07800 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator
D BB562_01495 GntR family transcriptional regulator K07979 ytrA; GntR family transcriptional regulator
C TetR/AcrR family
D BB562_00705 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D BB562_14760 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D BB562_15675 cell surface protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BB562_15480 TetR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
C Lrp/AsnC family
D BB562_05105 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
C MarR family
D BB562_15280 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D BB562_02025 hypothetical protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D BB562_12680 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D BB562_10730 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D BB562_08380 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D BB562_08025 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D BB562_09510 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D BB562_04975 transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D BB562_15565 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
C Fur family
D BB562_12770 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D BB562_14855 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D BB562_15630 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D BB562_10185 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
C ArsR family
D BB562_12370 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D BB562_02875 transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D BB562_05855 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
C PadR family
D BB562_16255 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D BB562_14730 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D BB562_02555 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D BB562_11550 transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D BB562_12260 Cro/Cl family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D BB562_11530 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D BB562_12820 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BB562_05295 transcriptional regulator K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D BB562_03365 hypothetical protein K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D BB562_15185 hypothetical protein K20375 ropB; HTH-type transcriptional regulator, pheromone-responsive regulator
D BB562_01995 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D BB562_13450 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D BB562_11815 hypothetical protein K07726 K07726; putative transcriptional regulator
D BB562_15775 transcription regulator, Xre family protein K07726 K07726; putative transcriptional regulator
D BB562_01010 transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
D BB562_12620 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D BB562_01050 transcription antiterminator BglG K03483 mtlR; mannitol operon transcriptional activator
C Others
D BB562_15605 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D BB562_04205 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D BB562_14655 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BB562_14665 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BB562_09400 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D BB562_10315 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D BB562_07580 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D BB562_12150 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D BB562_13105 SorC family transcriptional regulator K05311 cggR; central glycolytic genes regulator
D BB562_08560 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D BB562_04225 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D BB562_09825 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D BB562_06570 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0