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  Transfer RNA Biogenesis - Lactococcus piscium

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D LACPI_1749 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] C CCA adding factors D LACPI_1088 CCA-adding enzyme cca K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D LACPI_2279 proS; Proline--tRNA ligase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D LACPI_1797 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LACPI_1599 Putative leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LACPI_1608 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LACPI_0346 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LACPI_2015 Putative lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LACPI_2101 Putative aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LACPI_0319 Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D LACPI_0819 Putative alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LACPI_0653 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LACPI_0646 Putative threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LACPI_1461 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LACPI_0597 Putative cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LACPI_0413 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LACPI_2103 Putative histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LACPI_1673 pheS; Phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LACPI_1672 pheT; Phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LACPI_2116 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LACPI_0065 trpS; Tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D LACPI_0098 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors D LACPI_1912 Histidine triad (HIT) nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D LACPI_1643 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] C Psudouridine synthases D LACPI_0786 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D LACPI_1341 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D LACPI_2119 nifS; Putative cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LACPI_0592 iscS; Putative cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D LACPI_0746 yfjA; Sua5/YciO/YrdC family RNA-binding protein YfjA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LACPI_1753 Putative tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LACPI_0293 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D LACPI_0886 tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D LACPI_0309 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D LACPI_misc_RNA_5 RNaseP_bact_b K01978 rnpB; M1 RNA B 3'processing and CCA adding factors C 3'processing factors D LACPI_1749 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] C CCA adding factors D LACPI_1088 CCA-adding enzyme cca K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors B tRNA transport factors C tRNA export factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D LACPI_1599 Putative leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D LACPI_2279 proS; Proline--tRNA ligase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D LACPI_2116 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D LACPI_0065 trpS; Tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D LACPI_0646 Putative threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D LACPI_1797 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D LACPI_2015 Putative lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D LACPI_0819 Putative alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D LACPI_0413 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D LACPI_1608 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D LACPI_1461 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D LACPI_2101 Putative aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LACPI_0319 Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D LACPI_1005 glyQ; Glycyl-tRNA synthetase alpha chain GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D LACPI_1006 glyS; Glycyl-tRNA synthetase beta chain GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D LACPI_0597 Putative cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D LACPI_0346 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D LACPI_1673 pheS; Phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D LACPI_1672 pheT; Phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D LACPI_2103 Putative histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D LACPI_0653 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D LACPI_1858 gltX; Glutamate--tRNA ligase GltX K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] C Trans-editing factors D LACPI_0098 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D LACPI_1886 YbaK-like deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] B tRNA modification factors C Deaminases D LACPI_1394 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases C Methylthiotransferases C Methyltransferases D LACPI_1181 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D LACPI_1643 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D LACPI_1083 Putative tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D LACPI_0293 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D LACPI_1049 tRNA (adenine(22)-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D LACPI_1130 Putative tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D LACPI_0755 spoU; rRNA methylase SpoU K03437 spoU; RNA methyltransferase, TrmH family C Psudouridine synthases D LACPI_0786 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D LACPI_1341 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D LACPI_0876 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D LACPI_2119 nifS; Putative cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D LACPI_0592 iscS; Putative cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Other tRNA modification factors D LACPI_0886 tRNA uridine 5-carboxymethylaminomethyl modification enzyme K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D LACPI_1753 Putative tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D LACPI_1538 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D LACPI_1467 QueG; Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D LACPI_0368 DUF208-containing protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D LACPI_0510 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D LACPI_2118 thiI; Probable tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D LACPI_0015 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D LACPI_1696 Glycoprotease family protease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D LACPI_0746 yfjA; Sua5/YciO/YrdC family RNA-binding protein YfjA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D LACPI_1693 tRNA threonylcarbamoyladenosine biosynthesis protein Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D LACPI_1407 ATP/GTP hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D LACPI_0137 UPF0348 protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] B tRNA degradation factors C LACPI_1576 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024