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Transfer RNA Biogenesis - Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D lpg2848 ribonuclease, T2 family K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D lpg2742 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
D lpg2201 replication factor C subunit (activator I) K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D lpg2202 hypothetical protein K24956 ZBTB8OS; protein archease
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
C tRNA import factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D lpg1911 gltX; glutamate tRNA synthetase catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D lpg0694 proS; prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D lpg0937 ileS; isoleucyl tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D lpg1348 leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D lpg2882 metG_1; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D lpg1306 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D lpg2031 argS; arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D lpg1777 lysU; lysine tRNA synthetase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D lpg1478 aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
C Other AARSs
D lpg1799 alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D lpg2282 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D lpg2714 thrS; threonyl tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D lpg0513 serS; seryl tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D lpg1307 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D lpg0719 valS; valyl tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D lpg1544 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D lpg2711 pheS; phenylalanyl tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D lpg2710 pheT; phenylalanyl tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D lpg0568 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D lpg1444 trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D lpg1844 dtD; D-tyrosyl-tRNA K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
D lpg2765 hit; HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferase
C Methyltransferases
D lpg0481 S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
C Psudouridine synthases
D lpg1302 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D lpg2770 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D lpg1623 hydrogenase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D lpg1746 iscS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Elongator complex
C Elongator related proteins
C Other tRNA modification factors
D lpg2972 SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D lpg2696 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D lpg3001 thdF; GTP binding protein in thiophene and furan oxidation (GTPase) K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D lpg2889 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
B tRNA degradation factors
C TRAMP complex
C Rapid tRNA decay (RTD) pathway factors
C Other tRNA degradation factors
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AProkaryotic type
B 5'processing factors
C Ribonucrease P
D lpg3004 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D lpg2964 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D lpg2012 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D lpg2848 ribonuclease, T2 family K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D lpg2742 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
D lpg2201 replication factor C subunit (activator I) K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
D lpg2491 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
B tRNA transport factors
C tRNA export factors
D lpg0703 ABC transporter, ABC binding protein K06020 ettA; energy-dependent translational throttle protein EttA
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D lpg1348 leuS; leucyl tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D lpg0694 proS; prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D lpg0568 tyrS; tyrosyl tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D lpg1444 trpS; tryptophanyl tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D lpg2714 thrS; threonyl tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D lpg0937 ileS; isoleucyl tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D lpg1777 lysU; lysine tRNA synthetase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D lpg1799 alaS; alanyl tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D lpg0719 valS; valyl tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D lpg2882 metG_1; methionyl tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D lpg0513 serS; seryl tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D lpg1478 aspartyl tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D lpg1840 glyQ; glycyl tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D lpg1839 glyS; glycyl tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D lpg1307 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D lpg1911 gltX; glutamate tRNA synthetase catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D lpg1306 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D lpg2031 argS; arginyl tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D lpg2711 pheS; phenylalanyl tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D lpg2710 pheT; phenylalanyl tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D lpg1544 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D lpg2282 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D lpg1844 dtD; D-tyrosyl-tRNA K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D lpg1207 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
D lpg1721 yfhC; deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D lpg1462 zinc binding TIM barrel protein, YjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D lpg2861 nitrogen regulation protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
C Methylthiotransferases
D lpg1334 tRNA thiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
C Methyltransferases
D lpg0481 S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D lpg0396 trmD; tRNA (guanine N1) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D lpg3001 thdF; GTP binding protein in thiophene and furan oxidation (GTPase) K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D lpg1747 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D lpg2496 RNA methyltransferase TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
C Psudouridine synthases
D lpg1302 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D lpg2770 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D lpg1623 hydrogenase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D lpg1389 tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D lpg0698 hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D lpg1744 ydiC; HesB family protein K13628 iscA; iron-sulfur cluster assembly protein
D lpg1746 iscS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D lpg1579 glycine cleavage T protein K06980 ygfZ; tRNA-modifying protein YgfZ
C KEOPS/EKC complex
C Other tRNA modification factors
D lpg2889 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D lpg2696 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D lpg1550 tRNA-(ms(2)io(6)a)-hydrolase(tRNA hydroxylase) K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D lpg1532 putative peptidase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D lpg2004 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D lpg2886 ExsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D lpg2865 6-pyruvoyl tetrahydropterin synthase, putative K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D lpg2041 radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D lpg2740 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D lpg2003 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D lpg2727 tgt; queuine/archaeosine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D lpg0786 mesJ; cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D lpg1921 glycoprotease (O-sialoglycoprotein endopeptidase) K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D lpg2972 SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D lpg2357 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D lpg2699 ATPase or kinase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
B tRNA degradation factors
C lpg0092 vacB; (exo)ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C lpg2768 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024