+D GENES KO
#
KEGG Orthology (KO) - Limosilactobacillus portuensis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lpor00010]
D PRK60_03320 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRK60_06845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_08460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_04320 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PRK60_07000 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PRK60_07010 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PRK60_07005 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PRK60_00180 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_07895 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_06995 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRK60_04090 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PRK60_05535 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PRK60_05530 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PRK60_05525 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_09130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_01895 NAD-binding protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_03000 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05025 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05100 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_07330 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PRK60_01135 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_01365 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_03660 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_01120 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PRK60_07055 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:lpor00020]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_01145 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PRK60_05535 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PRK60_05530 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PRK60_05525 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:lpor00030]
D PRK60_06845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_08460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_00300 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PRK60_08965 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PRK60_05735 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D PRK60_06060 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PRK60_08585 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PRK60_03520 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D PRK60_07850 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PRK60_00360 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D PRK60_00035 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D PRK60_09120 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D PRK60_00040 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PRK60_07055 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRK60_05580 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PRK60_08240 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PRK60_08355 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
C 00040 Pentose and glucuronate interconversions [PATH:lpor00040]
D PRK60_07070 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PRK60_03520 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:lpor00051]
D PRK60_08455 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PRK60_04400 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PRK60_04320 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PRK60_07000 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:lpor00052]
D PRK60_01120 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D PRK60_08665 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PRK60_08660 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PRK60_07235 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRK60_07070 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PRK60_07055 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRK60_03320 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRK60_07900 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRK60_07905 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRK60_02020 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PRK60_08330 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PRK60_09075 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
C 00053 Ascorbate and aldarate metabolism [PATH:lpor00053]
D PRK60_08955 enolase C-terminal domain-like protein K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
C 00500 Starch and sucrose metabolism [PATH:lpor00500]
D PRK60_01085 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D PRK60_07070 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PRK60_04425 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D PRK60_08185 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D PRK60_09470 glycoside hydrolase family 65 protein K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D PRK60_09475 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D PRK60_07055 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRK60_03320 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRK60_06845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_08460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_08455 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lpor00520]
D PRK60_08455 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D PRK60_06900 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PRK60_06905 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D PRK60_08245 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PRK60_06635 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRK60_08195 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRK60_06925 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PRK60_01930 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D PRK60_03320 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRK60_07055 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRK60_07070 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PRK60_08665 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PRK60_08660 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D PRK60_07235 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRK60_02020 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PRK60_06845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_08460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_04400 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:lpor00620]
D PRK60_05535 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PRK60_05530 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PRK60_05525 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_07330 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PRK60_01135 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_01365 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_03660 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_05920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PRK60_06950 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRK60_04090 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PRK60_10015 accA; carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PRK60_09995 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PRK60_10005 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PRK60_10010 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PRK60_03245 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D PRK60_09130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_01895 NAD-binding protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_03000 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05025 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05100 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_00790 D-2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PRK60_04300 NAD(P)-dependent oxidoreductase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PRK60_08800 D-2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D PRK60_08450 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D PRK60_01145 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PRK60_07860 NAD-dependent malic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lpor00630]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_03340 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRK60_00915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:lpor00640]
D PRK60_05920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PRK60_06950 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_10015 accA; carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PRK60_09995 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PRK60_10005 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PRK60_10010 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PRK60_09130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_01895 NAD-binding protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_03000 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05025 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05100 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_09385 iron-containing alcohol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00650 Butanoate metabolism [PATH:lpor00650]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_01075 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PRK60_07330 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PRK60_05300 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PRK60_01610 (S)-acetoin forming diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D PRK60_05355 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:lpor00562]
D PRK60_05510 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PRK60_04320 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PRK60_07000 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lpor00190]
D PRK60_06175 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D PRK60_06195 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PRK60_06190 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PRK60_06660 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PRK60_06650 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PRK60_06655 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PRK60_06665 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PRK60_06645 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PRK60_06680 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PRK60_06670 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PRK60_06675 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PRK60_04285 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D PRK60_07245 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lpor00710]
D PRK60_07005 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PRK60_07010 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PRK60_07850 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D PRK60_04320 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PRK60_07000 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PRK60_03520 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:lpor00720]
D PRK60_01145 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_10015 accA; carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PRK60_09995 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PRK60_10005 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PRK60_10010 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PRK60_07825 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PRK60_03425 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PRK60_00570 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PRK60_06950 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRK60_05920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:lpor00680]
D PRK60_00915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PRK60_06995 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRK60_05920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D PRK60_06950 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRK60_00180 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_07895 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_08975 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:lpor00910]
D PRK60_03340 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRK60_06825 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:lpor00920]
D PRK60_06055 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D PRK60_00130 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PRK60_08370 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lpor00061]
D PRK60_10015 accA; carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D PRK60_09995 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D PRK60_10005 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D PRK60_10010 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D PRK60_09975 acyl carrier protein K02078 acpP; acyl carrier protein
D PRK60_03555 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D PRK60_09980 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PRK60_09970 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PRK60_09990 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PRK60_09985 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRK60_00270 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRK60_09960 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PRK60_10000 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PRK60_10020 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lpor00071]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_07330 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PRK60_01135 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_01365 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_03660 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:lpor00121]
D PRK60_04960 bsh; choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lpor00561]
D PRK60_03820 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PRK60_03550 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PRK60_04270 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PRK60_05275 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PRK60_01660 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PRK60_02250 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D PRK60_00490 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PRK60_00835 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PRK60_08330 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D PRK60_09385 iron-containing alcohol dehydrogenase K00086 dhaT; 1,3-propanediol dehydrogenase [EC:1.1.1.202]
C 00564 Glycerophospholipid metabolism [PATH:lpor00564]
D PRK60_07075 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D PRK60_04270 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PRK60_05275 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D PRK60_01660 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D PRK60_09510 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D PRK60_05235 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D PRK60_06115 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D PRK60_09400 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D PRK60_09440 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:lpor00600]
D PRK60_07900 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRK60_07905 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRK60_08330 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lpor00230]
D PRK60_05625 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D PRK60_00040 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D PRK60_07055 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRK60_05580 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PRK60_08240 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D PRK60_00155 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PRK60_00175 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D PRK60_00165 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PRK60_00150 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D PRK60_00140 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D PRK60_00145 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PRK60_00160 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D PRK60_00100 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PRK60_01625 ATP-grasp domain-containing protein K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D PRK60_00095 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D PRK60_00135 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D PRK60_00105 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PRK60_00170 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PRK60_05380 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PRK60_08055 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D PRK60_00045 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PRK60_08345 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PRK60_02980 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PRK60_06000 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D PRK60_01620 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D PRK60_00750 NUDIX domain-containing protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D PRK60_00845 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PRK60_09550 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D PRK60_01420 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D PRK60_00755 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PRK60_03475 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D PRK60_07320 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PRK60_07325 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PRK60_02330 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PRK60_05000 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PRK60_07240 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PRK60_07250 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PRK60_08305 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D PRK60_05750 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D PRK60_09555 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PRK60_01545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PRK60_06825 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:lpor00240]
D PRK60_04815 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRK60_04820 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PRK60_03645 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PRK60_03650 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D PRK60_03655 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D PRK60_00080 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D PRK60_09570 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D PRK60_05250 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D PRK60_08345 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PRK60_00750 NUDIX domain-containing protein K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase [EC:3.6.1.17]
D PRK60_08200 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D PRK60_04145 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D PRK60_06705 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D PRK60_09565 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PRK60_08095 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PRK60_02330 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D PRK60_07320 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PRK60_07325 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PRK60_05470 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PRK60_07280 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D PRK60_07840 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PRK60_06725 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D PRK60_04200 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lpor00250]
D PRK60_07940 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PRK60_09300 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PRK60_09085 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PRK60_09195 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PRK60_03980 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PRK60_03985 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PRK60_09555 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D PRK60_00105 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D PRK60_03645 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D PRK60_03340 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRK60_04815 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRK60_04820 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PRK60_00865 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D PRK60_00145 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PRK60_06900 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PRK60_00155 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lpor00260]
D PRK60_04890 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PRK60_04850 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PRK60_00120 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PRK60_04470 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PRK60_04475 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D PRK60_04465 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D PRK60_00915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PRK60_00180 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_07895 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_08975 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00270 Cysteine and methionine metabolism [PATH:lpor00270]
D PRK60_07885 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRK60_08375 aminotransferase class V-fold PLP-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRK60_09140 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRK60_00565 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PRK60_02445 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D PRK60_05615 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D PRK60_06220 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D PRK60_04890 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PRK60_04850 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PRK60_00120 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PRK60_04470 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PRK60_00130 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D PRK60_08370 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PRK60_00125 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D PRK60_09485 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PRK60_01890 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PRK60_09130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_01895 NAD-binding protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_03000 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05025 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05100 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_08975 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:lpor00280]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_05300 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:lpor00300]
D PRK60_00120 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PRK60_04470 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D PRK60_04890 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PRK60_04850 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PRK60_04865 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PRK60_04860 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D PRK60_08645 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PRK60_05330 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PRK60_05365 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PRK60_04895 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PRK60_04880 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D PRK60_04875 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D PRK60_03350 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PRK60_04035 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PRK60_04295 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PRK60_04855 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PRK60_04870 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D PRK60_04315 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D PRK60_08155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lpor00310]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:lpor00220]
D PRK60_06830 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D PRK60_03980 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PRK60_03985 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PRK60_06755 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D PRK60_00865 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D PRK60_00145 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PRK60_03340 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRK60_04815 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D PRK60_04820 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D PRK60_06825 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism [PATH:lpor00330]
D PRK60_08095 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D PRK60_03930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PRK60_02220 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D PRK60_07210 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PRK60_07215 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D PRK60_00680 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism
D PRK60_00540 hdcA; histidine decarboxylase, pyruvoyl type K01590 hdc; histidine decarboxylase [EC:4.1.1.22]
C 00350 Tyrosine metabolism [PATH:lpor00350]
D PRK60_07330 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PRK60_01135 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_01365 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_03660 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_04310 2-keto-4-pentenoate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
C 00360 Phenylalanine metabolism [PATH:lpor00360]
D PRK60_01075 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PRK60_03930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:lpor00380]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_03930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:lpor00430]
D PRK60_06950 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D PRK60_05920 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lpor00450]
D PRK60_08370 PLP-dependent aspartate aminotransferase family protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D PRK60_07885 PLP-dependent aspartate aminotransferase family protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRK60_08375 aminotransferase class V-fold PLP-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRK60_09140 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D PRK60_00565 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D PRK60_02380 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D PRK60_03710 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PRK60_07065 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D PRK60_08280 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lpor00460]
D PRK60_09300 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D PRK60_09085 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D PRK60_00915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lpor00470]
D PRK60_08105 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PRK60_06585 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PRK60_08120 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PRK60_08130 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PRK60_00865 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D PRK60_00145 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D PRK60_06005 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PRK60_05680 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PRK60_05310 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D PRK60_07940 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D PRK60_04895 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D PRK60_04880 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:lpor00480]
D PRK60_09485 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PRK60_01890 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D PRK60_04845 M1 family aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PRK60_01095 NAD(P)/FAD-dependent oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D PRK60_06060 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PRK60_08585 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D PRK60_00300 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:lpor00511]
D PRK60_07900 beta-galactosidase small subunit K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D PRK60_07905 glycoside hydrolase family 2 TIM barrel-domain containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
D PRK60_02065 glycosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lpor00541]
D PRK60_07070 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D PRK60_07235 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D PRK60_02020 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D PRK60_03880 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D PRK60_04400 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D PRK60_08245 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D PRK60_01930 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lpor00550]
D PRK60_06635 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRK60_08195 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRK60_06925 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PRK60_03085 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PRK60_05680 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PRK60_06585 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PRK60_08155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PRK60_04000 diacylglycerol kinase family protein K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D PRK60_05240 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PRK60_05685 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PRK60_05675 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PRK60_03940 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRK60_03015 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PRK60_05690 penicillin-binding transpeptidase domain-containing protein K08724 pbpB; penicillin-binding protein 2B
D PRK60_03295 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A
D PRK60_00485 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRK60_01115 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRK60_09190 murE; UDP-N-acetylmuramyl-tripeptide synthetase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D PRK60_06730 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D PRK60_06735 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:lpor00552]
D PRK60_09580 asp1; accessory Sec system glycosyltransferase Asp1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PRK60_09585 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PRK60_07160 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PRK60_08120 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PRK60_08130 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PRK60_08125 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D PRK60_08135 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D PRK60_00055 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PRK60_02145 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D PRK60_00490 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PRK60_00835 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D PRK60_02250 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D PRK60_02255 glycosyltransferase family 4 protein K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D PRK60_02050 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lpor00543]
D PRK60_09110 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D PRK60_04930 putative glycosyltransferase, exosortase G system-associated K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lpor00730]
D PRK60_03005 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PRK60_04370 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D PRK60_05610 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_06210 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_06205 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PRK60_04705 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PRK60_04375 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PRK60_04365 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D PRK60_03515 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PRK60_03525 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D PRK60_01545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:lpor00740]
D PRK60_05135 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D PRK60_05180 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D PRK60_04375 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D PRK60_05625 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism
D PRK60_04465 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lpor00760]
D PRK60_09885 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PRK60_07930 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D PRK60_03160 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D PRK60_07925 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D PRK60_08290 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D PRK60_05745 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:lpor00770]
D PRK60_08945 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D PRK60_00840 coaA; type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D PRK60_03485 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D PRK60_05485 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D PRK60_03110 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D PRK60_08110 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:lpor00780]
D PRK60_09990 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PRK60_09985 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRK60_00270 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRK60_09960 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PRK60_10000 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PRK60_10020 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PRK60_10025 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lpor00785]
D PRK60_08215 lipoate--protein ligase family protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D PRK60_00410 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PRK60_03860 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_05535 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D PRK60_05530 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D PRK60_05525 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:lpor00790]
D PRK60_04205 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PRK60_06170 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:lpor00670]
D PRK60_04205 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D PRK60_07825 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D PRK60_03425 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D PRK60_00915 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D PRK60_00165 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D PRK60_00170 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PRK60_03495 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PRK60_04200 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D PRK60_00570 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D PRK60_03305 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lpor00860]
D PRK60_05050 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D PRK60_07395 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lpor00130]
D PRK60_03680 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D PRK60_07335 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D PRK60_00230 PaaI family thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D PRK60_03675 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D PRK60_09115 NAD(P)H-binding protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D PRK60_03910 NAD(P)H-binding protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lpor00900]
D PRK60_04705 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D PRK60_08255 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_05300 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D PRK60_08300 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D PRK60_05075 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D PRK60_05085 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D PRK60_05080 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D PRK60_05090 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D PRK60_03440 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PRK60_05240 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D PRK60_03880 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:lpor01054]
D PRK60_07940 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D PRK60_08230 linear amide C-N hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:lpor00332]
D PRK60_07210 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D PRK60_07215 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:lpor00261]
D PRK60_04890 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D PRK60_04850 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D PRK60_04865 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D PRK60_04860 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lpor00521]
D PRK60_03320 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D PRK60_07055 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D PRK60_05510 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D PRK60_03880 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D PRK60_03320 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D PRK60_09980 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PRK60_09985 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRK60_00270 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRK60_10020 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D PRK60_09975 acyl carrier protein K02078 acpP; acyl carrier protein
D PRK60_03555 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D PRK60_02445 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lpor00362]
D PRK60_03815 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D PRK60_04505 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D PRK60_01075 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:lpor00627]
D PRK60_03930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D PRK60_03245 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:lpor00625]
D PRK60_01135 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_01365 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_03660 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_07330 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D PRK60_05095 YjjG family noncanonical pyrimidine nucleotidase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D PRK60_05095 YjjG family noncanonical pyrimidine nucleotidase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
D PRK60_03815 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:lpor00643]
D PRK60_03930 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D PRK60_03815 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:lpor00626]
D PRK60_01135 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_01365 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_03660 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D PRK60_07330 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lpor03020]
D PRK60_01385 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PRK60_01390 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PRK60_01570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PRK60_03480 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PRK60_08205 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lpor03010]
D PRK60_04150 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PRK60_05260 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PRK60_01470 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PRK60_06225 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PRK60_01525 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PRK60_09265 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PRK60_01410 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PRK60_01510 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PRK60_01605 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PRK60_01435 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PRK60_01565 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PRK60_01405 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PRK60_01560 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PRK60_01505 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PRK60_03700 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PRK60_05450 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PRK60_03590 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PRK60_01485 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PRK60_09275 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PRK60_01460 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PRK60_05455 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PRK60_04970 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PRK60_07765 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PRK60_01455 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PRK60_01440 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PRK60_01445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PRK60_01500 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PRK60_01515 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PRK60_07385 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PRK60_09285 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PRK60_07390 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PRK60_07770 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PRK60_01600 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PRK60_01490 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PRK60_01535 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PRK60_01475 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PRK60_01575 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PRK60_01520 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PRK60_03615 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PRK60_03140 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PRK60_03390 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PRK60_01465 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PRK60_01450 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PRK60_01495 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PRK60_03400 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PRK60_03530 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PRK60_01480 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PRK60_01530 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PRK60_08190 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PRK60_03190 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PRK60_03300 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PRK60_07785 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PRK60_09230 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PRK60_03135 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PRK60_01555 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PRK60_00205 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_05890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_08540 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_08020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_02270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_02275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_05885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_08535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_08005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_00210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_00215 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_08530 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_02280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_08000 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_05880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lpor00970]
D PRK60_08010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRK60_01350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_05850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_01920 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_03380 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_04645 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_07975 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PRK60_07995 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PRK60_01210 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRK60_05820 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRK60_05785 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRK60_02320 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PRK60_06800 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRK60_07960 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRK60_09155 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRK60_02290 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRK60_09160 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRK60_05795 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRK60_06785 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRK60_01345 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRK60_02995 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRK60_05810 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRK60_05860 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRK60_00530 tRNA-His K14226 tRNA-His; tRNA His
D PRK60_07410 tRNA-His K14226 tRNA-His; tRNA His
D PRK60_02315 tRNA-His K14226 tRNA-His; tRNA His
D PRK60_05805 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRK60_08015 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRK60_01340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_02325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_02530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_05855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_07910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_05870 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRK60_09310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRK60_09325 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRK60_05840 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRK60_05790 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRK60_05825 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRK60_05835 tRNA-Ile K14230 tRNA-Met; tRNA Met
D PRK60_02300 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PRK60_05815 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PRK60_01355 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRK60_04610 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRK60_05845 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRK60_02285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRK60_05370 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRK60_05800 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRK60_05830 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRK60_00220 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRK60_05865 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRK60_07985 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRK60_08380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRK60_02310 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PRK60_02305 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PRK60_07965 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PRK60_01335 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRK60_05875 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRK60_02295 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRK60_03345 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PRK60_01650 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PRK60_01655 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PRK60_01645 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PRK60_06045 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PRK60_04985 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PRK60_09090 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PRK60_04015 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PRK60_04020 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PRK60_08880 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PRK60_09630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PRK60_07820 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PRK60_08280 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PRK60_03495 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D PRK60_06200 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PRK60_02450 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PRK60_05635 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PRK60_08035 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PRK60_03010 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PRK60_05225 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PRK60_00550 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRK60_08805 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRK60_03265 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PRK60_03270 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PRK60_00200 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PRK60_08310 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lpor03060]
D PRK60_01540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PRK60_07780 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PRK60_06980 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PRK60_06065 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PRK60_09220 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_03240 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_07105 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PRK60_03580 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PRK60_07305 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D PRK60_03570 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PRK60_09185 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PRK60_04830 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lpor04122]
D PRK60_05610 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_06210 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_05600 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PRK60_06205 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lpor03018]
D PRK60_06995 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRK60_06970 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PRK60_08150 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PRK60_04135 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRK60_06095 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PRK60_01240 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PRK60_05445 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PRK60_05160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PRK60_07190 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRK60_07245 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lpor03030]
D PRK60_06930 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRK60_04085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRK60_05220 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PRK60_07300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRK60_07270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRK60_05460 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRK60_09240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRK60_09290 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PRK60_04025 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PRK60_09270 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PRK60_04840 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PRK60_05305 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PRK60_04240 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PRK60_03100 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRK60_01635 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lpor03410]
D PRK60_08405 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PRK60_06955 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PRK60_08780 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PRK60_03105 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PRK60_09750 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PRK60_02440 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PRK60_01170 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PRK60_03630 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PRK60_03100 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRK60_05385 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PRK60_01635 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lpor03420]
D PRK60_08080 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PRK60_04720 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D PRK60_07040 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PRK60_07045 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PRK60_05405 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PRK60_08350 helD; RNA polymerase recycling motor HelD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_00820 helD; RNA polymerase recycling motor HelD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_01630 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_03100 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRK60_01635 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lpor03430]
D PRK60_06090 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PRK60_06020 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D PRK60_06085 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PRK60_08350 helD; RNA polymerase recycling motor HelD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_00820 helD; RNA polymerase recycling motor HelD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_01630 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_03430 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PRK60_03435 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PRK60_05385 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PRK60_09270 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PRK60_04085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRK60_05220 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PRK60_09240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRK60_07300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRK60_05460 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRK60_07270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRK60_06930 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRK60_01635 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PRK60_00955 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:lpor03440]
D PRK60_05385 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PRK60_09270 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PRK60_09250 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PRK60_04010 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PRK60_07290 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D PRK60_06100 recA; recombinase RecA K03553 recA; recombination protein RecA
D PRK60_03100 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRK60_06080 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PRK60_06075 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PRK60_03545 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRK60_05585 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PRK60_04085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRK60_05220 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PRK60_09240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRK60_07300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRK60_05460 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRK60_07270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRK60_06930 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRK60_03490 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lpor02010]
D PRK60_00705 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PRK60_00700 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D PRK60_00695 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D PRK60_00690 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PRK60_00380 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PRK60_00385 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PRK60_00395 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PRK60_00390 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PRK60_08930 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PRK60_08925 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D PRK60_08920 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PRK60_08915 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PRK60_09645 ABC transporter substrate-binding protein/permease K10036 glnH; glutamine transport system substrate-binding protein
D PRK60_09650 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_01260 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D PRK60_01250 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PRK60_01255 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PRK60_01265 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_03920 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PRK60_07870 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PRK60_03925 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D PRK60_07880 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D PRK60_07875 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_05030 transporter substrate-binding domain-containing protein K16957 tcyK; L-cystine transport system substrate-binding protein
D PRK60_05040 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D PRK60_05035 amino acid ABC transporter permease K16959 tcyM; L-cystine transport system permease protein
D PRK60_05045 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_04975 ABC transporter substrate-binding protein/permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D PRK60_04980 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_06595 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PRK60_06600 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D PRK60_06605 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PRK60_00985 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PRK60_00990 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PRK60_00995 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PRK60_01000 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PRK60_01005 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PRK60_00455 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PRK60_01590 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PRK60_01580 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PRK60_01585 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PRK60_08730 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D PRK60_08725 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D PRK60_03220 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PRK60_06770 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PRK60_06765 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PRK60_06180 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PRK60_06185 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PRK60_01050 ATP-binding cassette domain-containing protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:lpor02060]
D PRK60_02245 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PRK60_06700 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PRK60_02240 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PRK60_04425 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D PRK60_08185 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D PRK60_09075 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
C 03070 Bacterial secretion system [PATH:lpor03070]
D PRK60_07780 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PRK60_06980 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PRK60_01540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PRK60_06065 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PRK60_09220 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_03240 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_07105 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PRK60_03570 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PRK60_03580 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lpor02020]
D PRK60_08935 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PRK60_08930 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PRK60_09355 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PRK60_09335 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PRK60_09330 yycF; response regulator YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D PRK60_09235 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PRK60_08730 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D PRK60_08725 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D PRK60_08720 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D PRK60_08715 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D PRK60_08120 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PRK60_08125 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D PRK60_08130 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PRK60_08135 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D PRK60_01205 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PRK60_03210 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PRK60_03205 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D PRK60_05120 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D PRK60_05115 LytTR family DNA-binding domain-containing protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D PRK60_05110 CidA/LrgA family protein K05338 lrgA; holin-like protein
D PRK60_05105 LrgB family protein K05339 lrgB; holin-like protein LrgB
D PRK60_03340 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_08420 MFS transporter K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D PRK60_00520 ATP-binding protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D PRK60_00515 response regulator K07719 glnL; two-component system, response regulator GlnL
D PRK60_06835 DNA-binding domain-containing protein K07719 glnL; two-component system, response regulator GlnL
D PRK60_00865 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D PRK60_06195 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D PRK60_06190 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D PRK60_08170 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D PRK60_01930 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lpor02024]
D PRK60_07415 amino acid permease K20265 gadC; glutamate:GABA antiporter
D PRK60_00985 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PRK60_00990 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PRK60_00995 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PRK60_01000 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PRK60_01005 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PRK60_09220 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_03240 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_07780 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PRK60_06980 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PRK60_01540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PRK60_06065 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PRK60_07105 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PRK60_03570 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PRK60_03580 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lpor02040]
D PRK60_03920 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PRK60_07870 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PRK60_04030 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D PRK60_06995 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lpor01501]
D PRK60_00985 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PRK60_00990 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PRK60_00995 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PRK60_01000 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PRK60_01005 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PRK60_03220 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PRK60_03940 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRK60_03015 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:lpor01502]
D PRK60_06585 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PRK60_08105 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PRK60_08155 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D PRK60_05685 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PRK60_05675 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lpor01503]
D PRK60_09355 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PRK60_08120 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PRK60_08125 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D PRK60_08130 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PRK60_08135 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D PRK60_01205 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lpor01000]
C 01001 Protein kinases [BR:lpor01001]
D PRK60_03510 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D PRK60_09335 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PRK60_08720 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D PRK60_03210 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PRK60_05120 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D PRK60_00520 ATP-binding protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lpor01009]
D PRK60_03505 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lpor01002]
D PRK60_04830 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D PRK60_01400 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PRK60_09035 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D PRK60_07865 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D PRK60_00845 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D PRK60_09490 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D PRK60_02130 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PRK60_05570 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PRK60_00155 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D PRK60_06900 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D PRK60_09195 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D PRK60_01190 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D PRK60_08230 linear amide C-N hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D PRK60_04960 bsh; choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D PRK60_07805 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D PRK60_08175 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D PRK60_08940 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PRK60_00340 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PRK60_00585 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PRK60_01840 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PRK60_03805 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PRK60_05760 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D PRK60_01245 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D PRK60_02520 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D PRK60_04845 M1 family aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D PRK60_08760 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D PRK60_09540 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D PRK60_02470 pepV; dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D PRK60_08645 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PRK60_05330 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PRK60_05365 ArgE/DapE family deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D PRK60_04050 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D PRK60_04870 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D PRK60_01950 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D PRK60_03405 Xaa-Pro peptidase family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D PRK60_08050 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PRK60_08160 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D PRK60_05230 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D PRK60_09355 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PRK60_00485 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRK60_01115 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRK60_01730 Clp protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PRK60_07020 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D PRK60_00685 Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D PRK60_05480 SepM family pheromone-processing serine protease K07177 K07177; Lon-like protease
D PRK60_05290 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PRK60_09185 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D PRK60_00680 proline-specific peptidase family protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D PRK60_03310 rhomboid family intramembrane serine protease K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
C 01003 Glycosyltransferases [BR:lpor01003]
D PRK60_02250 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D PRK60_02255 glycosyltransferase family 4 protein K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D PRK60_03940 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRK60_03015 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PRK60_09580 asp1; accessory Sec system glycosyltransferase Asp1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PRK60_09585 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PRK60_07160 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D PRK60_09110 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D PRK60_04930 putative glycosyltransferase, exosortase G system-associated K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lpor01005]
D PRK60_02065 glycosyltransferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-]
D PRK60_01995 glycosyltransferase family 2 protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lpor01011]
D PRK60_06635 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRK60_08195 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D PRK60_06925 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D PRK60_03085 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D PRK60_05680 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D PRK60_09190 murE; UDP-N-acetylmuramyl-tripeptide synthetase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D PRK60_06585 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D PRK60_08105 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D PRK60_06005 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D PRK60_05685 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D PRK60_05675 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D PRK60_03940 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D PRK60_03015 PBP1A family penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D PRK60_05690 penicillin-binding transpeptidase domain-containing protein K08724 pbpB; penicillin-binding protein 2B
D PRK60_03295 penicillin-binding protein 2 K21465 pbpA; penicillin-binding protein A
D PRK60_00485 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRK60_01115 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D PRK60_02130 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PRK60_05570 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D PRK60_07805 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D PRK60_08175 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
C 01004 Lipid biosynthesis proteins [BR:lpor01004]
D PRK60_09980 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D PRK60_09970 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D PRK60_09990 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D PRK60_09985 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRK60_00270 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D PRK60_09960 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PRK60_10000 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D PRK60_10020 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D PRK60_03550 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D PRK60_04270 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D PRK60_05275 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lpor01008]
D PRK60_07940 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:lpor01006]
D PRK60_03440 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D PRK60_05240 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D PRK60_03335 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PRK60_03675 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:lpor01007]
D PRK60_03345 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PRK60_00200 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PRK60_08310 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PRK60_07820 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PRK60_03010 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PRK60_08280 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PRK60_05635 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PRK60_06200 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PRK60_02450 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PRK60_08035 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PRK60_04985 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PRK60_09090 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PRK60_00550 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRK60_08805 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRK60_04015 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PRK60_04020 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PRK60_09630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PRK60_05225 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PRK60_08880 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PRK60_06045 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PRK60_03265 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PRK60_03270 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PRK60_03350 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PRK60_04035 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PRK60_04295 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PRK60_04855 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00841 patA; aminotransferase [EC:2.6.1.-]
D PRK60_09140 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lpor00194]
D PRK60_06645 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D PRK60_06650 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D PRK60_06655 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D PRK60_06660 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D PRK60_06665 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D PRK60_06670 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D PRK60_06675 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D PRK60_06680 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lpor03000]
D PRK60_09460 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PRK60_05970 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PRK60_08655 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D PRK60_08470 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D PRK60_08825 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D PRK60_07935 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D PRK60_08605 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PRK60_00760 Fur family transcriptional regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D PRK60_02430 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D PRK60_08325 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D PRK60_00620 metalloregulator ArsR/SmtB family transcription factor K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D PRK60_08835 metalloregulator ArsR/SmtB family transcription factor K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D PRK60_07365 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D PRK60_01300 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D PRK60_10025 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D PRK60_08250 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D PRK60_07200 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D PRK60_09070 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D PRK60_09025 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D PRK60_07730 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D PRK60_00005 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PRK60_00015 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PRK60_03450 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D PRK60_06750 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D PRK60_05170 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D PRK60_01370 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D PRK60_07095 PspC domain-containing protein K03973 pspC; phage shock protein C
D PRK60_09565 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D PRK60_03115 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D PRK60_05705 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lpor03021]
D PRK60_01570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PRK60_01385 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PRK60_01390 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PRK60_08205 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D PRK60_03480 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PRK60_04030 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D PRK60_07790 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D PRK60_05210 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PRK60_03420 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PRK60_07775 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PRK60_03280 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D PRK60_08705 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:lpor03019]
D PRK60_03560 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PRK60_01240 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PRK60_05445 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D PRK60_06095 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D PRK60_06970 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D PRK60_08150 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PRK60_06050 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D PRK60_04135 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRK60_06995 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRK60_05160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PRK60_07190 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRK60_07245 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D PRK60_07035 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:lpor03011]
D PRK60_04150 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D PRK60_05260 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D PRK60_01470 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D PRK60_06225 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D PRK60_01525 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D PRK60_09265 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D PRK60_01410 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D PRK60_01510 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D PRK60_01605 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D PRK60_01435 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D PRK60_01565 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D PRK60_01405 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D PRK60_01560 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D PRK60_01505 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PRK60_03700 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D PRK60_05450 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D PRK60_03590 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D PRK60_01485 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D PRK60_09275 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D PRK60_01460 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D PRK60_05455 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D PRK60_04970 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D PRK60_07765 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D PRK60_01455 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D PRK60_01440 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D PRK60_01445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D PRK60_01500 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D PRK60_01515 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D PRK60_09285 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D PRK60_07390 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D PRK60_07770 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D PRK60_07385 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D PRK60_01600 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D PRK60_01490 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D PRK60_01535 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D PRK60_01475 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D PRK60_01575 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D PRK60_01520 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D PRK60_03615 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D PRK60_03140 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D PRK60_03390 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D PRK60_01465 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D PRK60_01450 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D PRK60_01495 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D PRK60_03400 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D PRK60_03530 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D PRK60_01480 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D PRK60_01530 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D PRK60_08190 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D PRK60_03190 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D PRK60_03300 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PRK60_07785 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D PRK60_09230 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D PRK60_03135 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D PRK60_01555 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D PRK60_00215 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_08530 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_02280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_08000 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_05880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_00205 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_05890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_08540 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_08020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_02270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_02275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_05885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_08535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_08005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_00210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lpor03009]
D PRK60_03560 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PRK60_04005 era; GTPase Era K03595 era; GTPase
D PRK60_05400 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D PRK60_05210 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D PRK60_03420 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D PRK60_07775 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D PRK60_08265 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D PRK60_03500 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D PRK60_05490 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D PRK60_05010 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D PRK60_09675 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PRK60_05700 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D PRK60_07260 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D PRK60_03445 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D PRK60_05730 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D PRK60_07810 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D PRK60_09365 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D PRK60_01665 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D PRK60_04120 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D PRK60_00600 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PRK60_01215 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PRK60_04825 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PRK60_05740 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D PRK60_07225 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D PRK60_03600 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D PRK60_05015 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D PRK60_06035 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D PRK60_07815 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D PRK60_08150 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D PRK60_06050 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D PRK60_03515 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D PRK60_04155 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D PRK60_04235 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D PRK60_00805 hflX; GTPase HflX K03665 hflX; GTPase
D PRK60_03150 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D PRK60_06710 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PRK60_05000 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D PRK60_05190 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D PRK60_05215 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D PRK60_09245 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D PRK60_03170 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D PRK60_03995 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D PRK60_03155 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D PRK60_07110 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D PRK60_00025 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D PRK60_03185 YceD family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lpor03016]
D PRK60_05395 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D PRK60_04190 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D PRK60_05225 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D PRK60_05635 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D PRK60_02450 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PRK60_08280 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D PRK60_03010 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PRK60_08035 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D PRK60_04985 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PRK60_06045 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D PRK60_09090 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D PRK60_08880 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D PRK60_09630 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D PRK60_07820 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D PRK60_06200 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D PRK60_00550 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRK60_08805 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D PRK60_03265 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D PRK60_03270 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D PRK60_00200 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PRK60_08310 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D PRK60_04995 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D PRK60_03045 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PRK60_03060 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D PRK60_01595 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D PRK60_05185 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D PRK60_05610 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_06210 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_06710 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D PRK60_03335 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D PRK60_09210 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D PRK60_09205 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PRK60_09225 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D PRK60_03960 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D PRK60_04015 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D PRK60_04020 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D PRK60_03345 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D PRK60_00345 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D PRK60_01880 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PRK60_04405 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D PRK60_07310 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D PRK60_08040 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D PRK60_03605 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D PRK60_04040 tRNA (adenine(22)-N(1))-methyltransferase TrmK K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D PRK60_05725 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D PRK60_03250 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D PRK60_05600 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D PRK60_06070 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D PRK60_06205 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D PRK60_08060 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D PRK60_07230 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D PRK60_07220 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D PRK60_06945 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D PRK60_03180 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D PRK60_06970 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:lpor03012]
D PRK60_05195 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PRK60_03130 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PRK60_07205 abc-f; ABC-F type ribosomal protection protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D PRK60_05255 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PRK60_05435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PRK60_01415 fusA; elongation factor G K02355 fusA; elongation factor G
D PRK60_06720 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D PRK60_05245 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D PRK60_06715 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D PRK60_08085 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D PRK60_01550 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D PRK60_00940 efp; elongation factor P K02356 efp; elongation factor P
D PRK60_07100 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D PRK60_02095 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lpor03110]
D PRK60_01375 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D PRK60_02230 AAA family ATPase K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D PRK60_09420 ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D PRK60_05425 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D PRK60_05160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PRK60_07190 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRK60_05155 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PRK60_08045 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D PRK60_05165 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PRK60_02405 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D PRK60_07195 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D PRK60_09355 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D PRK60_08050 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D PRK60_06680 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D PRK60_01140 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D PRK60_03035 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D PRK60_00610 trxA; thioredoxin K03671 TXN; thioredoxin
D PRK60_06015 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:lpor04131]
D PRK60_08345 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D PRK60_07010 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PRK60_00180 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_07895 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_04090 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PRK60_08895 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lpor03032]
D PRK60_04840 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PRK60_05305 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D PRK60_04160 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PRK60_09235 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PRK60_09290 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D PRK60_04025 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D PRK60_03120 DnaD domain protein K03346 dnaB; replication initiation and membrane attachment protein
D PRK60_03125 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D PRK60_09270 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PRK60_04085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRK60_05220 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PRK60_09240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRK60_05460 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRK60_07270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRK60_06930 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRK60_07300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRK60_04240 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D PRK60_03100 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRK60_01635 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PRK60_00955 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PRK60_09260 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PRK60_09255 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PRK60_04280 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PRK60_04275 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PRK60_04260 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lpor03036]
D PRK60_03560 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D PRK60_04160 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PRK60_09235 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D PRK60_08605 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D PRK60_03565 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D PRK60_04110 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D PRK60_04115 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D PRK60_05665 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PRK60_08070 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D PRK60_05720 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D PRK60_05695 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D PRK60_05670 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D PRK60_05500 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D PRK60_05660 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRK60_06215 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D PRK60_05655 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D PRK60_06160 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PRK60_06630 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PRK60_06155 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D PRK60_06150 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D PRK60_06615 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA
D PRK60_10055 ParA family protein K03496 parA; chromosome partitioning protein
D PRK60_00010 AAA family ATPase K03496 parA; chromosome partitioning protein
D PRK60_00005 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PRK60_00015 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PRK60_04280 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PRK60_04275 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PRK60_09205 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D PRK60_09675 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D PRK60_04100 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D PRK60_05420 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D PRK60_07025 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lpor03400]
D PRK60_04530 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D PRK60_06955 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D PRK60_08780 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D PRK60_08405 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D PRK60_09890 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D PRK60_07840 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D PRK60_01170 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D PRK60_09750 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PRK60_02440 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D PRK60_03105 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D PRK60_03630 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D PRK60_05385 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D PRK60_01635 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D PRK60_03100 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D PRK60_04720 ATP-binding cassette domain-containing protein K03701 uvrA; excinuclease ABC subunit A
D PRK60_07040 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D PRK60_07045 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D PRK60_05405 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D PRK60_08350 helD; RNA polymerase recycling motor HelD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_00820 helD; RNA polymerase recycling motor HelD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_01630 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D PRK60_01385 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D PRK60_01390 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D PRK60_01570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D PRK60_08205 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D PRK60_03480 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D PRK60_08080 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D PRK60_06090 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D PRK60_06020 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D PRK60_06085 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D PRK60_03430 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D PRK60_03435 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D PRK60_04085 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D PRK60_05220 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D PRK60_09240 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D PRK60_05460 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D PRK60_07270 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D PRK60_06930 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D PRK60_07300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D PRK60_09270 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PRK60_00955 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PRK60_05585 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D PRK60_06100 recA; recombinase RecA K03553 recA; recombination protein RecA
D PRK60_06080 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D PRK60_06075 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D PRK60_03490 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D PRK60_07835 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D PRK60_09250 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D PRK60_03545 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D PRK60_04010 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D PRK60_07290 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D PRK60_03455 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D PRK60_03945 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D PRK60_09455 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D PRK60_09450 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D PRK60_09260 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D PRK60_09255 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D PRK60_04260 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D PRK60_04160 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D PRK60_04135 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D PRK60_09500 LytTR family transcriptional regulator K03502 umuC; DNA polymerase V
D PRK60_05290 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D PRK60_01980 recX; recombination regulator RecX K03565 recX; regulatory protein
D PRK60_05070 helicase C-terminal domain-containing protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D PRK60_07320 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D PRK60_07325 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D PRK60_06055 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lpor03029]
D PRK60_05195 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PRK60_03130 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D PRK60_05255 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D PRK60_05435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PRK60_01415 fusA; elongation factor G K02355 fusA; elongation factor G
D PRK60_04005 era; GTPase Era K03595 era; GTPase
D PRK60_00200 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PRK60_02450 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PRK60_04985 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PRK60_03010 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PRK60_01650 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PRK60_01655 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PRK60_01645 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D PRK60_09270 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D PRK60_05160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PRK60_05165 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D PRK60_07190 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRK60_07195 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D PRK60_05155 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D PRK60_05610 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_06210 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_09220 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_03240 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lpor02000]
D PRK60_03220 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D PRK60_06770 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D PRK60_06765 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D PRK60_06180 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D PRK60_06185 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D PRK60_01050 ATP-binding cassette domain-containing protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D PRK60_04195 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D PRK60_00705 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D PRK60_00700 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D PRK60_00695 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D PRK60_00690 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D PRK60_00380 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D PRK60_00385 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PRK60_00395 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D PRK60_00390 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D PRK60_08930 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D PRK60_08925 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D PRK60_08920 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D PRK60_08915 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D PRK60_09645 ABC transporter substrate-binding protein/permease K10036 glnH; glutamine transport system substrate-binding protein
D PRK60_09650 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_01260 transporter substrate-binding domain-containing protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D PRK60_01250 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PRK60_01255 amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D PRK60_01265 amino acid ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_03920 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PRK60_07870 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PRK60_03925 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D PRK60_07880 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D PRK60_07875 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_05030 transporter substrate-binding domain-containing protein K16957 tcyK; L-cystine transport system substrate-binding protein
D PRK60_05040 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D PRK60_05035 amino acid ABC transporter permease K16959 tcyM; L-cystine transport system permease protein
D PRK60_05045 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_04975 ABC transporter substrate-binding protein/permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D PRK60_04980 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_06595 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D PRK60_06600 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D PRK60_06605 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D PRK60_00640 trpX; tryptophan ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D PRK60_00635 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D PRK60_00630 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D PRK60_03800 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PRK60_05360 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PRK60_06135 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D PRK60_03785 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PRK60_03790 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PRK60_06145 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D PRK60_03795 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_06140 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D PRK60_00985 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D PRK60_00990 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D PRK60_00995 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D PRK60_01000 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D PRK60_01005 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D PRK60_00455 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PRK60_01590 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D PRK60_01580 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PRK60_01585 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PRK60_00460 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D PRK60_00465 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D PRK60_04055 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D PRK60_04065 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D PRK60_04060 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D PRK60_08730 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D PRK60_08725 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D PRK60_00315 multidrug ABC transporter ATPase K25148 berA; beta-exotoxin I transport system ATP-binding protein
D PRK60_03055 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D PRK60_03050 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D PRK60_08740 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PRK60_08745 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D PRK60_01835 XRE family transcriptional regulator K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PRK60_02205 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PRK60_08735 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D PRK60_08490 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PRK60_08855 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D PRK60_09790 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PRK60_08485 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PRK60_08850 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D PRK60_02370 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D PRK60_00615 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PRK60_03230 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D PRK60_00785 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D PRK60_08420 MFS transporter K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D PRK60_02495 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D PRK60_06110 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D PRK60_08475 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D PRK60_08435 MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D PRK60_03685 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PRK60_06590 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D PRK60_00420 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D PRK60_09805 MFS transporter K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D PRK60_04660 DHA2 family efflux MFS transporter permease subunit K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D PRK60_08895 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D PRK60_00740 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D PRK60_02245 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PRK60_06700 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D PRK60_02240 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D PRK60_04425 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D PRK60_08185 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D PRK60_09075 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component
D PRK60_08885 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D PRK60_03665 ion channel K10716 kch; voltage-gated potassium channel
D PRK60_06525 potassium channel family protein K10716 kch; voltage-gated potassium channel
D PRK60_07370 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D PRK60_05985 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D PRK60_00590 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D PRK60_04725 CrcB family protein K06199 crcB; fluoride exporter
D PRK60_04730 CrcB family protein K06199 crcB; fluoride exporter
D PRK60_04600 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PRK60_05110 CidA/LrgA family protein K05338 lrgA; holin-like protein
D PRK60_08335 PTS sugar transporter subunit IIA K16209 lacS; lactose/raffinose/galactose permease
D PRK60_08590 glycoside-pentoside-hexuronide (GPH):cation symporter K16209 lacS; lactose/raffinose/galactose permease
D PRK60_09465 SLC45 family MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D PRK60_01325 amino acid permease K11733 lysP; lysine-specific permease
D PRK60_00505 basic amino acid/polyamine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PRK60_00535 hdcC; histidine-histamine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PRK60_06740 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D PRK60_06745 basic amino acid/polyamine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D PRK60_07415 amino acid permease K20265 gadC; glutamate:GABA antiporter
D PRK60_01295 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D PRK60_06855 GRP family sugar transporter K05340 glcU; glucose uptake protein
D PRK60_08615 cation:dicarboxylase symporter family transporter K11102 gltP; proton glutamate symport protein
D PRK60_00575 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D PRK60_00880 Na+/H+ antiporter NhaC family protein K03315 nhaC; Na+:H+ antiporter, NhaC family
D PRK60_00445 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D PRK60_06790 cation:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D PRK60_08360 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D PRK60_00965 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D PRK60_00970 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D PRK60_00580 nucleobase:cation symporter-2 family protein K16169 pbuX; xanthine permease
D PRK60_01195 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D PRK60_04350 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PRK60_06985 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D PRK60_08365 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D PRK60_09125 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D PRK60_08870 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D PRK60_07400 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D PRK60_04775 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D PRK60_00070 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D PRK60_00075 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D PRK60_04770 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D PRK60_04125 ECF transporter S component K23675 fmnP; riboflavin transporter
D PRK60_01275 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D PRK60_01280 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D PRK60_05500 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D PRK60_08710 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
C 02044 Secretion system [BR:lpor02044]
D PRK60_01400 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D PRK60_05650 YggT family protein K02221 yggT; YggT family protein
D PRK60_05475 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D PRK60_05470 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D PRK60_05465 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D PRK60_07120 helicase-related protein K02240 comFA; competence protein ComFA
D PRK60_07115 ComF family protein K02242 comFC; competence protein ComFC
D PRK60_05955 comGA; competence type IV pilus ATPase ComGA K02243 comGA; competence protein ComGA
D PRK60_05950 type II secretion system F family protein K02244 comGB; competence protein ComGB
D PRK60_05945 comGC; competence type IV pilus major pilin ComGC K02245 comGC; competence protein ComGC
D PRK60_05940 hypothetical protein K02246 comGD; competence protein ComGD
D PRK60_07105 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D PRK60_07780 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D PRK60_06980 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D PRK60_01540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D PRK60_03580 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D PRK60_03570 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D PRK60_06065 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D PRK60_09220 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_03240 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PRK60_03735 asp1; accessory Sec system protein Asp1 K12268 asp1; accessory secretory protein Asp1
D PRK60_03755 asp2; accessory Sec system protein Asp2 K12269 asp2; accessory secretory protein Asp2
D PRK60_03760 asp3; accessory Sec system protein Asp3 K12270 asp3; accessory secretory protein Asp3
C 02042 Bacterial toxins [BR:lpor02042]
D PRK60_04600 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D PRK60_04210 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lpor02022]
D PRK60_08935 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D PRK60_09335 walK; cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D PRK60_09330 yycF; response regulator YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D PRK60_08720 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D PRK60_08715 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D PRK60_03210 HAMP domain-containing histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D PRK60_03205 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D PRK60_06865 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D PRK60_05120 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D PRK60_05115 LytTR family DNA-binding domain-containing protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D PRK60_00520 ATP-binding protein K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D PRK60_00515 response regulator K07719 glnL; two-component system, response regulator GlnL
D PRK60_06835 DNA-binding domain-containing protein K07719 glnL; two-component system, response regulator GlnL
C 02035 Bacterial motility proteins [BR:lpor02035]
D PRK60_03920 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PRK60_07870 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D PRK60_01400 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lpor04812]
D PRK60_06160 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PRK60_06630 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PRK60_05660 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRK60_05665 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D PRK60_10055 ParA family protein K03496 parA; chromosome partitioning protein
D PRK60_00010 AAA family ATPase K03496 parA; chromosome partitioning protein
D PRK60_00005 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D PRK60_00015 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lpor04147]
D PRK60_06995 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D PRK60_07010 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D PRK60_07005 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D PRK60_04090 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D PRK60_07190 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PRK60_05160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D PRK60_06845 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_08460 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D PRK60_00045 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D PRK60_05435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D PRK60_03045 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D PRK60_09130 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_01895 NAD-binding protein K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_03000 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05025 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_05100 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D PRK60_09060 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D PRK60_01545 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D PRK60_05380 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D PRK60_03985 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D PRK60_03980 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D PRK60_08665 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D PRK60_03820 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D PRK60_03340 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D PRK60_08975 hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D PRK60_00170 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D PRK60_05520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D PRK60_00300 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D PRK60_04320 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PRK60_07000 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D PRK60_00180 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D PRK60_07895 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lpor02048]
D PRK60_02790 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D PRK60_00955 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D PRK60_08315 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D PRK60_05925 class I SAM-dependent methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D PRK60_09425 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D PRK60_09860 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D PRK60_01965 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D PRK60_09865 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE
D PRK60_02960 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE
D PRK60_02965 type II toxin-antitoxin system PemK/MazF family toxin K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D PRK60_10050 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D PRK60_02170 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D PRK60_09925 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D PRK60_09945 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D PRK60_10045 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D PRK60_02455 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB
D PRK60_07095 PspC domain-containing protein K03973 pspC; phage shock protein C
D PRK60_05660 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D PRK60_06160 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PRK60_06630 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D PRK60_04280 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D PRK60_04275 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D PRK60_05610 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PRK60_06210 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lpor01504]
D PRK60_01050 ATP-binding cassette domain-containing protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D PRK60_08120 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D PRK60_08125 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D PRK60_08130 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D PRK60_08135 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D PRK60_01205 mprF; bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D PRK60_03220 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lpor03100]
D PRK60_08010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D PRK60_01350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_05850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_01920 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_03380 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_04645 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D PRK60_07975 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PRK60_07995 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D PRK60_01210 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRK60_05820 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRK60_05785 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D PRK60_02320 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D PRK60_06800 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRK60_07960 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRK60_09155 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D PRK60_02290 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRK60_09160 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRK60_05795 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRK60_06785 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D PRK60_01345 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRK60_02995 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRK60_05810 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRK60_05860 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D PRK60_00530 tRNA-His K14226 tRNA-His; tRNA His
D PRK60_07410 tRNA-His K14226 tRNA-His; tRNA His
D PRK60_02315 tRNA-His K14226 tRNA-His; tRNA His
D PRK60_05805 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRK60_08015 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D PRK60_01340 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_02325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_02530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_05855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_07910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D PRK60_05870 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRK60_09310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRK60_09325 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D PRK60_05840 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRK60_05790 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRK60_05825 tRNA-Met K14230 tRNA-Met; tRNA Met
D PRK60_05835 tRNA-Ile K14230 tRNA-Met; tRNA Met
D PRK60_02300 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PRK60_05815 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D PRK60_01355 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRK60_04610 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRK60_05845 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D PRK60_02285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRK60_05370 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRK60_05800 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRK60_05830 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D PRK60_00220 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRK60_05865 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRK60_07985 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRK60_08380 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D PRK60_02310 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D PRK60_02305 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PRK60_07965 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D PRK60_01335 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRK60_05875 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRK60_02295 tRNA-Val K14237 tRNA-Val; tRNA Val
D PRK60_00205 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_05890 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_08540 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_08020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_02270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D PRK60_02275 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_05885 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_08535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_08005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_00210 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D PRK60_00215 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_08530 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_02280 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_08000 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_05880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D PRK60_07305 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D PRK60_03960 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D PRK60_06870 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D PRK60_04560 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D PRK60_09670 aldo/keto reductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D PRK60_04305 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D PRK60_04635 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D PRK60_09170 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D PRK60_03705 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D PRK60_03865 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D PRK60_01055 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D PRK60_00475 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D PRK60_02335 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D PRK60_04935 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D PRK60_09055 sugar O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D PRK60_01815 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D PRK60_04520 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D PRK60_04655 nucleoside 2-deoxyribosyltransferase K08728 E2.4.2.6; nucleoside deoxyribosyltransferase [EC:2.4.2.6]
D PRK60_07080 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D PRK60_09615 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D PRK60_03540 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D PRK60_06915 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D PRK60_07085 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D PRK60_06975 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D PRK60_03620 serine hydrolase K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D PRK60_08750 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D PRK60_04575 Cof-type HAD-IIB family hydrolase K07757 ybiV; sugar-phosphatase [EC:3.1.3.23]
D PRK60_08675 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D PRK60_03145 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D PRK60_09280 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D PRK60_08275 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D PRK60_08270 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D PRK60_03235 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PRK60_05540 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D PRK60_04685 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D PRK60_02465 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D PRK60_08395 aspartate aminotransferase family protein K20708 E5.1.1.21; isoleucine 2-epimerase [EC:5.1.1.21]
D PRK60_08795 NAD(P)H-hydrate epimerase K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6]
D PRK60_09200 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D PRK60_02385 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D PRK60_09730 FAD-dependent oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D PRK60_04215 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D PRK60_04805 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D PRK60_00310 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D PRK60_04620 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
D PRK60_04690 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D PRK60_02260 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D PRK60_04105 reductase K02859 ribT; riboflavin biosynthesis RibT protein
D PRK60_04745 AarF/UbiB family protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D PRK60_01680 cold-shock protein K03704 cspA; cold shock protein
D PRK60_05630 cold shock domain-containing protein K03704 cspA; cold shock protein
D PRK60_05575 Spx/MgsR family RNA polymerase-binding regulatory protein K16509 spxA; regulatory protein spx
D PRK60_05775 spxA; transcriptional regulator SpxA K16509 spxA; regulatory protein spx
D PRK60_07920 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D PRK60_08065 S1 domain-containing RNA-binding protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D PRK60_05430 tig; trigger factor K03545 tig; trigger factor
D PRK60_06965 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D PRK60_07315 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D PRK60_09410 OsmC family protein K07397 yhfA; putative redox protein
D PRK60_05770 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D PRK60_08890 methylated-DNA--[protein]-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D PRK60_06165 JAB domain-containing protein K03630 radC; DNA repair protein RadC
D PRK60_04785 deoxyribonuclease I K07457 K07457; endonuclease III related protein
D PRK60_05265 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D PRK60_04255 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D PRK60_05060 DnaD domain protein K02086 dnaD; DNA replication protein
D PRK60_07560 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit
D PRK60_00245 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PRK60_01180 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PRK60_06560 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D PRK60_09775 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D PRK60_07295 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D PRK60_09655 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D PRK60_02425 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D PRK60_04695 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D PRK60_06990 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D PRK60_08905 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PRK60_00710 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PRK60_00745 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PRK60_03610 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PRK60_08400 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D PRK60_02080 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D PRK60_07970 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D PRK60_09175 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PRK60_00660 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D PRK60_08100 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D PRK60_08980 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D PRK60_01155 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D PRK60_07945 YidE/YbjL duplication K07085 K07085; putative transport protein
C 99978 Cell growth
D PRK60_09215 Jag N-terminal domain-containing protein K06346 jag; spoIIIJ-associated protein
D PRK60_01690 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D PRK60_01695 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D PRK60_05505 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D PRK60_03990 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D PRK60_01705 GH25 family lysozyme K07273 acm; lysozyme
D PRK60_08480 biotin/lipoyl-binding protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D PRK60_08910 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D PRK60_05765 competence protein CoiA family protein K06198 coiA; competence protein CoiA
D PRK60_03080 DUF4479 and tRNA-binding domain-containing protein K06878 K06878; tRNA-binding protein
D PRK60_04550 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D PRK60_02390 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D PRK60_02375 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D PRK60_01970 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D PRK60_00305 VOC family protein K04750 phnB; PhnB protein
D PRK60_08165 LemA family protein K03744 lemA; LemA protein
D PRK60_07915 SprT family protein K03095 sprL; SprT-like protein
D PRK60_05895 VTT domain-containing protein K03975 dedA; membrane-associated protein
D PRK60_00780 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D PRK60_07090 phage holin family protein K08972 K08972; putative membrane protein
D PRK60_00440 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D PRK60_09080 DUF1440 domain-containing protein K08996 yagU; putative membrane protein
C 99997 Function unknown
D PRK60_08220 HD domain-containing protein K06885 K06885; uncharacterized protein
D PRK60_00115 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D PRK60_00435 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D PRK60_04460 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D PRK60_01860 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D PRK60_03090 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D PRK60_03255 HD domain-containing protein K06950 K06950; uncharacterized protein
D PRK60_04795 HD domain-containing protein K06950 K06950; uncharacterized protein
D PRK60_03595 KH domain-containing protein K06960 K06960; uncharacterized protein
D PRK60_07845 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D PRK60_09660 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D PRK60_09005 nitroreductase family protein K07078 K07078; uncharacterized protein
D PRK60_09445 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PRK60_01865 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D PRK60_05995 metallophosphoesterase K07095 K07095; uncharacterized protein
D PRK60_00670 DHHA1 domain-containing protein K07097 K07097; uncharacterized protein
D PRK60_00260 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D PRK60_05390 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D PRK60_06625 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D PRK60_04965 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D PRK60_04710 DUF2075 domain-containing protein K09384 K09384; uncharacterized protein
D PRK60_03575 putative DNA-binding protein K09787 K09787; uncharacterized protein
D PRK60_04095 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein
D PRK60_06545 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D PRK60_06430 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein
D PRK60_07640 YegP family protein K09946 K09946; uncharacterized protein
D PRK60_05280 YneF family protein K09976 K09976; uncharacterized protein
D PRK60_03395 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D PRK60_05205 YlxR family protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024