+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Lactiplantibacillus plantarum ST-III

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D LPST_C1295 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C LPST_C1584 era; GTP-binding protein Era K03595 era; GTPase C LPST_C1726 obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C LPST_C1633 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C LPST_C1264 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB C LPST_C0516 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D LPST_C1065 rsuA; pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D LPST_C0384 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D LPST_C1282 sunL; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D LPST_C0529 rsmC; 16S RNA methylase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D LPST_C1763 probable methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D LPST_C1604 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D LPST_C2636 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D LPST_C1820 mraW; cell division protein MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D LPST_C0538 methyltransferase (putative) K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D LPST_C1269 hemolysin-like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D LPST_C1830 rrmA; rRNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D LPST_C0511 trmH; tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D LPST_C0036 SPOUT methyltransferase superfamily protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D LPST_C2063 conjugal transfer nickase/helicase TraI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D LPST_C1269 hemolysin-like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D LPST_C0924 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D LPST_C1516 rluB; pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D LPST_C0774 rluE; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LPST_C1836 rluD2; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LPST_C1424 rluD1; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D LPST_C2180 rluA; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C LPST_C0548 rimI1; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C LPST_C0549 rimI2; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C LPST_C1961 ribosomal protein acetylating enzyme K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C LPST_C2329 ribosomal protein acetylating enzyme K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C LPST_C1302 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM C LPST_C1605 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C LPST_C1295 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C LPST_C1886 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C LPST_C0510 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C LPST_C0423 rhe1; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C LPST_C1889 rhe3; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C LPST_C1584 era; GTP-binding protein Era K03595 era; GTPase C LPST_C1285 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C LPST_C1343 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C LPST_C1509 engA; GTP-binding protein EngA K03977 engA; GTPase C LPST_C1726 obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C LPST_C1486 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A C LPST_C0702 GTPase K03665 hflX; GTPase C LPST_C1205 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C LPST_C1976 SUA5 family translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C LPST_C1602 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C LPST_C1629 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C LPST_C1634 hypothetical protein K09748 rimP; ribosome maturation factor RimP C LPST_C0003 hypothetical protein K14761 rlbA; ribosome-associated protein C LPST_C1209 hypothetical protein K09710 ybeB; ribosome-associated protein C LPST_C1586 hypothetical protein K07042 ybeY; probable rRNA maturation factor C LPST_C1206 hypothetical protein K07574 yhbY; RNA-binding protein C LPST_C0564 ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor C LPST_C2631 translation-associated GTPase K06942 ychF; ribosome-binding ATPase C LPST_C1212 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024