+D Proteoglycan KO
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Proteoglycans - Labeo rohita (rohu)
%
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ACell surface proteoglycans
B Syndecan family (transmembrane HSPG)
C 127181905 sdc2; syndecan-2 K16336 SDC2; syndecan 2
C 127178522 syndecan-2-B-like K16336 SDC2; syndecan 2
C 127181733 sdc3; syndecan-3 K16337 SDC3; syndecan 3
C 127166840 sdc4; syndecan-4 K16338 SDC4; syndecan 4
B Glypican family (GPI-anchored HSPG)
C 127153259 gpc1a; glypican-1 K08107 GPC1; glypican 1
C 127154317 gpc1b; glypican-1b K08107 GPC1; glypican 1
C 127176632 gpc2; glypican-2 K08108 GPC2; glypican 2
C 127176364 gpc3; glypican-3 K08109 GPC3; glypican 3
C 127176199 gpc4; glypican-4 K08110 GPC4; glypican 4
C 127153258 gpc5b; glypican-5b K08111 GPC5; glypican 5
C 127154305 gpc5c; glypican-5 isoform X1 K08111 GPC5; glypican 5
C 127171808 gpc5a; glypican-5a K08111 GPC5; glypican 5
C 127164316 gpc6a; glypican-6a isoform X1 K08112 GPC6; glypican 6
B Others
C 127164298 ptprz1b; receptor-type tyrosine-protein phosphatase zeta isoform X1 K08114 PTPRZ; receptor-type tyrosine-protein phosphatase zeta [EC:3.1.3.48]
C 127156803 ptprz1a; LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase zeta K08114 PTPRZ; receptor-type tyrosine-protein phosphatase zeta [EC:3.1.3.48]
C 127166781 tgfbr3; transforming growth factor beta receptor type 3 K05843 TGFBR3; transforming growth factor, beta receptor III
C 127171514 chondroitin sulfate proteoglycan 4 K08115 CSPG4; chondroitin sulfate proteoglycan 4
C 127165698 cspg4ba; chondroitin sulfate proteoglycan 4 K08115 CSPG4; chondroitin sulfate proteoglycan 4
C 127156818 cspg4; chondroitin sulfate proteoglycan 4 K08115 CSPG4; chondroitin sulfate proteoglycan 4
C 127176177 cd74a; CD74 molecule, major histocompatibility complex, class II invariant chain a K06505 CD74; CD74 antigen
C 127177951 cspg5a; chondroitin sulfate proteoglycan 5 isoform X1 K08116 CSPG5; chondroitin sulfate proteoglycan 5
C 127161964 CD44 antigen isoform X1 K06256 CD44; CD44 antigen
C 127161965 cd44b; CD44 antigen K06256 CD44; CD44 antigen
C 127151854 thbd; thrombomodulin K03907 THBD; thrombomodulin
C 127151855 thrombomodulin K03907 THBD; thrombomodulin
C 127171159 appb; LOW QUALITY PROTEIN: amyloid beta (A4) precursor protein b K04520 APP; amyloid beta A4 protein
C 127162956 appa; amyloid beta (A4) precursor protein a isoform X1 K04520 APP; amyloid beta A4 protein
C 127181185 aplp2; amyloid-like protein 2 isoform X1 K08117 APLP2; amyloid-like protein 2
C 127152025 esm1; endothelial cell-specific molecule 1 K25036 ESM1; endothelial cell-specific molecule 1
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AExtracellular matrix (ECM) proteoglycans
B Small leucine-rich proteoglycan (SLRP) family
C class I
D 127154684 bgnb; biglycan b K08118 BGN; biglycan
D 127169403 bgna; biglycan a K08118 BGN; biglycan
D 127164621 dcn; decorin K04660 DCN; decorin
D 127154681 si:dkey-32e6.6; extracellular matrix protein 2 K08119 ECM2; extracellular matrix protein 2
D 127153214 ecm2; extracellular matrix protein 2 K08119 ECM2; extracellular matrix protein 2
D 127169388 si:dkey-6n6.1; extracellular matrix protein 2 isoform X1 K08119 ECM2; extracellular matrix protein 2
D 127153217 aspn; asporin K08120 ASPN; asporin
C class II
D 127170087 fmodb; fibromodulin K08121 FMOD; fibromodulin
D 127173039 fmoda; fibromodulin a K08121 FMOD; fibromodulin
D 127164518 lum; lumican K08122 LUM; lumican
D 127163773 kera; keratocan isoform X1 K08123 KERA; keratocan
D 127153216 omd; osteomodulin K08124 OMD; osteomodulin
D 127173202 prelp; prolargin K08125 PRELP; prolargin
C class III
D 127154843 ognb; osteoglycin, paralog b K08126 OGN; osteoglycin
D 127153218 ogna; osteoglycin, paralog a K08126 OGN; osteoglycin
D 127164589 epyc; epiphycan isoform X1 K08127 EPYC; epiphycan
D 127172707 optc; opticin K08127 EPYC; epiphycan
C class IV
D 127174051 chad; chondroadherin K06248 CHAD; chondroadherin
D 127171131 nyx; nyctalopin isoform X1 K08129 NYX; nyctalopin
D 127177570 tsku; tsukushi isoform X1 K08130 TSKU; tsukushi
C class V
D 127154295 podn; podocan isoform X1 K25037 PODN; podocan
B Aggrecan / versican family
C 127168469 acana; LOW QUALITY PROTEIN: aggrecan core protein K06792 AGC1; aggrecan 1
C 127153955 ncanb; neurocan core protein K06794 NCAN; neurocan core protein
C 127182875 ncana; neurocan core protein K06794 NCAN; neurocan core protein
C 127178858 bcan; brevican core protein isoform X1 K06795 BCAN; brevican
B Basement membrane proteoglycans
C 127155170 hspg2; basement membrane-specific heparan sulfate proteoglycan core protein isoform X1 K06255 HSPG2; basement membrane-specific heparan sulfate proteoglycan core protein
C 127155121 agrn; agrin isoform X1 K06254 AGRN; agrin
C 127176947 col15a1b; LOW QUALITY PROTEIN: collagen, type XV, alpha 1b K08135 COL15A; collagen type XV alpha
C 127170401 col18a1a; collagen type XVIII alpha 1 chain a isoform X1 K06823 COL18A; collagen type XVIII alpha
C 127167221 col18a1b; collagen alpha-1(XVIII) chain isoform X1 K06823 COL18A; collagen type XVIII alpha
C 127154245 smc3; structural maintenance of chromosomes protein 3 K06669 SMC3; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
C 127173193 p3h1; prolyl 3-hydroxylase 1 K08134 P3H1; procollagen-proline 3-dioxygenase 1 [EC:1.14.11.7]
B Others
C 127175529 srgn; serglycin K06849 PGSG; proteoglycan peptide core protein
C 127176174 spock1; LOW QUALITY PROTEIN: testican-1 K08136 SPOCK; testican
C 127168217 spock3; testican-3 isoform X1 K08136 SPOCK; testican
C 127174491 testican-2 K08136 SPOCK; testican
C 127175305 spock2; testican-2 K08136 SPOCK; testican
C 127181930 col9a2; collagen alpha-2(IX) chain K08131 COL9A; collagen type IX alpha
C 127172647 col9a1a; LOW QUALITY PROTEIN: collagen, type IX, alpha 1a K08131 COL9A; collagen type IX alpha
C 127162203 col9a3; collagen alpha-3(IX) chain K08131 COL9A; collagen type IX alpha
C 127175022 col9a1b; collagen, type IX, alpha 1b isoform X1 K08131 COL9A; collagen type IX alpha
C 127181485 collagen alpha-1(IX) chain K08131 COL9A; collagen type IX alpha
C 127179448 col12a1a; collagen alpha-1(XII) chain isoform X1 K08132 COL12A; collagen type XII alpha
C 127183212 col12a1b; LOW QUALITY PROTEIN: collagen alpha-1(XII) chain K08132 COL12A; collagen type XII alpha
C 127182137 collagen alpha-1(XIV) chain isoform X1 K08133 COL14A; collagen type XIV alpha
C 127178565 col14a1a; LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain K08133 COL14A; collagen type XIV alpha
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2021