+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Leptidea sinapis (Wood White)
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 126976191 rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 126972391 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 126979726 nucleolar protein 58 K14565 NOP58; nucleolar protein 58
D 126966125 NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D 126964541 box C/D snoRNA protein 1 K27833 ZNHIT6; box C/D snoRNA protein 1
C Box H/ACA snoRNPs
D 126973389 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 126980078 probable H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 126977210 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D 126970273 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D 126967716 H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
D 126979543 protein SHQ1 homolog K14764 SHQ1; protein SHQ1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D 126964579 U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 126972397 U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D 126970150 U3 small nucleolar ribonucleoprotein protein MPP10-like K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D 126968978 neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D 126965449 ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7
D 126977000 periodic tryptophan protein 2 homolog isoform X1 K14558 PWP2; periodic tryptophan protein 2
D 126975942 something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D 126964992 U3 small nucleolar RNA-associated protein 4 homolog K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D 126972288 WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D 126968737 U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D 126970080 WD repeat-containing protein 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D 126979870 HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D 126977027 probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D 126969532 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D 126966919 transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D 126977461 U3 small nucleolar RNA-associated protein 14 homolog A K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D 126975446 U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D 126976796 U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D 126964515 nucleolar complex protein 4 homolog B K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D 126978605 small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D 126965782 WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D 126965503 nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D 126979250 rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D 126971815 rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 126972417 U3 small nucleolar RNA-associated protein 25 homolog K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D 126970047 ribosomal L1 domain-containing protein CG13096 K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D 126974921 probable ATP-dependent RNA helicase DDX10 isoform X1 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D 126965785 probable ATP-dependent RNA helicase pitchoune isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 126965790 probable ATP-dependent RNA helicase pitchoune K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 126965792 ATP-dependent RNA helicase DDX18-like isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 126979192 probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D 126979523 probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D 126973231 putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 126975667 probable ATP-dependent RNA helicase kurz isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D 126964872 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D 126975043 ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D 126968054 ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D 126975264 uncharacterized protein LOC126975264 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D 126972605 lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D 126966463 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 126964688 casein kinase II subunit beta isoform X1 K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D 126972167 protein AATF K14782 AATF; protein AATF/BFR2
D 126971736 ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D 126976438 activator of basal transcription 1-like K14785 ESF2; ESF2/ABP1 family protein
D 126967692 protein KRI1 homolog isoform X1 K14786 KRI1; protein KRI1
D 126966252 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein
D 126975934 probable RNA-binding protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1
D 126970776 RNA cytidine acetyltransferase-like K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D 126972775 nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2
D 126970985 nucleolar protein 9 K14790 NOP9; nucleolar protein 9
D 126977846 PIN2/TERF1-interacting telomerase inhibitor 1 K11135 PINX1; Pin2-interacting protein X1
D 126979429 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 126979661 probable RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D 126969374 U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9
D 126974163 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 126966181 ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36
D 126965395 DDB1- and CUL4-associated factor 13 isoform X1 K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D 126976596 serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D 126975504 uncharacterized protein LOC126975504 isoform X1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D 126977294 probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D 126974034 probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D 126969075 rRNA N6-adenosine-methyltransferase METTL5 isoform X1 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5
D 126971406 bystin K14797 ENP1; essential nuclear protein 1
D 126969910 protein LTV1 homolog K14798 LTV1; protein LTV1
D 126968811 RNA-binding protein NOB1 isoform X1 K11883 NOB1; RNA-binding protein NOB1
D 126969858 RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1
D 126967593 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 126977318 adenylate kinase isoenzyme 6 homolog K18532 AK6; adenylate kinase [EC:2.7.4.3]
D 126973100 pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1
D 126979479 uncharacterized protein LOC126979479 K14800 TSR2; pre-rRNA-processing protein TSR2
D 126977070 18S rRNA aminocarboxypropyltransferase K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D 126966856 programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4
D 126977066 programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4
D 126971558 exportin-1 K14290 XPO1; exportin-1
D 126968900 importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1
D 126977227 transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 126966052 importin-5 K20222 IPO5; importin-5
D 126978788 importin-7 K20223 IPO7; importin-7
C Other pre-40S particles
D 126975824 probable phospholipid-transporting ATPase IA isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 126978008 eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J
D 126978171 probable protein phosphatase 2C T23F11.1 isoform X1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16]
D 126975851 protein Pixie K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D 126965905 uncharacterized protein LOC126965905 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 126970139 uncharacterized protein LOC126970139 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 126970303 ATP-dependent RNA helicase p62 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 126970305 ATP-dependent RNA helicase p62-like K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 126972720 uncharacterized protein LOC126972720 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 126965785 probable ATP-dependent RNA helicase pitchoune isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 126965790 probable ATP-dependent RNA helicase pitchoune K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 126965792 ATP-dependent RNA helicase DDX18-like isoform X1 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 126969686 ATP-dependent RNA helicase DDX24-like K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D 126969888 probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 126965596 probable ATP-dependent RNA helicase CG8611 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D 126969616 probable ATP-dependent RNA helicase Dbp73D K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D 126967162 ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D 126967042 probable ATP-dependent RNA helicase DDX55 homolog K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D 126972791 probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D 126966577 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D 126977037 guanine nucleotide-binding protein-like 3 homolog K14538 NUG1; nuclear GTP-binding protein
D 126975384 nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein
D 126968711 large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
C RNases
D 126975100 oligoribonuclease, mitochondrial isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 126965008 RNA exonuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 126975507 RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 126976528 exonuclease GOR isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 126977050 5'-3' exoribonuclease 1-like isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 126964788 5'-3' exoribonuclease 2 homolog K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D RNase MRP
E 126972437 ribonucleases P/MRP protein subunit POP1 isoform X1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E 126967334 ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E 126974877 ribonuclease P/MRP protein subunit POP5 isoform X1 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E 126968974 ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E 126979329 ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
E 126970714 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 126974465 ribonuclease P protein subunit p40-like K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Kinases
C Export and cytoplasmic maturation factors
D 126978431 ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D 126975205 dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5
D 126968999 eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D 126968880 heat shock protein 68-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 126972721 major heat shock 70 kDa protein Ba-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 126975187 heat shock protein 68-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 126976127 heat shock protein 68-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 126976686 heat shock 70 kDa protein cognate 4 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 126977036 heat shock protein 68-like isoform X1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 126969363 mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4
D 126965027 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D 126971780 nuclear RNA export factor 1-like isoform X1 K14284 NXF; nuclear RNA export factor
D 126974290 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
D 126972578 NTF2-related export protein K14285 NXT1_2; NTF2-related export protein 1/2
D 126967593 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 126965704 cytoplasmic 60S subunit biogenesis factor ZNF622 K14816 REI1; pre-60S factor REI1
D 126969074 ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1
D 126967955 ribosome biogenesis protein SPATA5 isoform X1 K14575 AFG2; AAA family ATPase
D 126977898 cyclin-dependent kinase 2-interacting protein-like K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 126971558 exportin-1 K14290 XPO1; exportin-1
D 126968900 importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1
D 126977227 transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 126966052 importin-5 K20222 IPO5; importin-5
D 126978788 importin-7 K20223 IPO7; importin-7
D 126964537 dual specificity protein phosphatase MPK-4-like isoform X1 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D 126975202 testis-expressed protein 10 homolog K14827 IPI1; pre-rRNA-processing protein IPI1
D 126970835 WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3
D 126973082 uncharacterized protein LOC126973082 K16912 LAS1; ribosomal biogenesis protein LAS1
C Ribosome quality control proteins
D 126978532 uncharacterized protein LOC126978532 K24970 TCF25; transcription factor 25
D 126964787 ribosome quality control complex subunit NEMF homolog isoform X1 K24971 NEMF; nuclear export mediator factor NEMF
D 126977924 transitional endoplasmic reticulum ATPase TER94 K13525 VCP; transitional endoplasmic reticulum ATPase
D 126978999 nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4
D 126967135 ubiquitin fusion degradation protein 1 homolog isoform X1 K14016 UFD1; ubiquitin fusion degradation protein 1
D 126965642 putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29]
D 126979614 ankyrin repeat and zinc finger domain-containing protein 1-like isoform X1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D 126969648 ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1
D 126975786 zinc finger protein 593 homolog K14821 BUD20; bud site selection protein 20
D 126967422 coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1
D 126977999 probable rRNA-processing protein EBP2 homolog K14823 EBP2; rRNA-processing protein EBP2
D 126964494 ribosome biogenesis protein BOP1 homolog K14824 ERB1; ribosome biogenesis protein ERB1
D 126972367 transmembrane emp24 domain-containing protein 1-like K14825 TMED5; p24 family protein gamma-2
D 126973447 transmembrane emp24 domain-containing protein 5-like isoform X1 K14825 TMED5; p24 family protein gamma-2
D 126967609 46 kDa FK506-binding nuclear protein isoform X1 K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8]
D 126970319 p21-activated protein kinase-interacting protein 1-like K14830 MAK11; protein MAK11
D 126976971 protein MAK16 homolog A K14831 MAK16; protein MAK16
D 126976157 CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21
D 126979371 midasin isoform X1 K14572 MDN1; midasin
D 126976119 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D 126969043 nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2
D 126975601 nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3
D 126976466 uncharacterized protein LOC126976466 isoform X1 K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D 126978102 RNA-binding protein 28 K14573 NOP4; nucleolar protein 4
D 126976868 nucleolar protein 8 K14836 NOP8; nucleolar protein 8
D 126977122 ribosome biogenesis protein NOP53 K14840 NOP53; nucleolar protein 53
D 126973323 WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1
D 126975095 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2
D 126967540 pescadillo homolog K14843 PES1; pescadillo
D 126969370 protein penguin K14844 PUF6; pumilio homology domain family member 6
D 126979429 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 126971169 decapping nuclease DXO homolog K14845 RAI1; RAT1-interacting protein
D 126974425 bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
D 126966807 nuclear valosin-containing protein-like K14571 RIX7; ribosome biogenesis ATPase
D 126964561 probable ribosome production factor 1 K14846 RPF1; ribosome production factor 1
D 126972237 ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2
D 126970311 glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1
D 126974796 ribosomal RNA processing protein 1 homolog K14849 RRP1; ribosomal RNA-processing protein 1
D 126977088 ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D 126974163 RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 126979178 nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17
D 126969380 ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis
D 126975940 notchless protein homolog 1 K14855 RSA4; ribosome assembly protein 4
D 126969969 protein SDA1 homolog K14856 SDA1; protein SDA1
D 126966918 pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D 126974519 protein Peter pan isoform X1 K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D 126967064 translation machinery-associated protein 16 homolog K14860 TMA16; translation machinery-associated protein 16
D 126977406 ribosome biogenesis protein WDR12 homolog K14863 WDR12; ribosome biogenesis protein
D 126968956 FMR1-interacting protein NUFIP1 isoform X1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1
B Other ribosome biogenesis factors
C 126979799 protein BCCIP homolog K15262 BCP1; protein BCP1
C 126978871 cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein
C 126965968 5-methylcytosine rRNA methyltransferase NSUN4 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
C 126977998 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C 126976626 dimethyladenosine transferase 1, mitochondrial K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-]
C 126976386 S-adenosylmethionine sensor upstream of mTORC1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C 126966512 rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-]
C 126979547 rRNA N6-adenosine-methyltransferase ZCCHC4 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-]
C 126967996 probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
C 126972712 ATP-dependent RNA helicase DHX33-like K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6]
C 126977411 bifunctional peptidase and arginyl-hydroxylase JMJD5 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
C 126968217 GTPase Era, mitochondrial K03595 era; GTPase
C 126968904 proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein
C 126966958 methyltransferase-like protein 17, mitochondrial K27906 METTL17; ribosome assembly protein METTL17/RSM22, mitochondrial
C 126964801 mitochondrial GTPase 1 K19828 MTG1; mitochondrial GTPase 1
C 126977246 mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-]
C 126964498 nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 126972391 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 126964684 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D 126973389 H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 126970273 H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
D 126979249 rRNA methyltransferase 2, mitochondrial K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
B ribosomal protein modification factors
B rRNA processing factors
C 126968054 ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C 126968217 GTPase Era, mitochondrial K03595 era; GTPase
C 126977246 mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C 126974221 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
D 126964747 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126964751 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126969661 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126972611 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126977150 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126978234 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126978235 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126980096 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126980097 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 126964752 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36
D 126964753 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36
D 126974587 small nucleolar RNA snR61/Z1/Z11 K14887 SNORD38; small nucleolar RNA SNORD38
C SnoRNAs act as guides for 2'-O-ribose methylation
D 126971017 small nucleolar RNA Me28S-Am982 K14885 SNORD51; small nucleolar RNA SNORD51
D 126964749 small nucleolar RNA snR60/Z15/Z230/Z193/J17 K14886 SNORD77_80; small nucleolar RNA SNORD77/80
D 126964754 small nucleolar RNA snR60/Z15/Z230/Z193/J17 K14886 SNORD77_80; small nucleolar RNA SNORD77/80
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
D 126964750 small nucleolar RNA SNORA53 K14929 SNORA53; small nucleolar RNA SNORA53
D 126969292 small nucleolar RNA SNORA53 K14929 SNORA53; small nucleolar RNA SNORA53
C SnoRNAs act as guides for pseudouridynation
D 126973662 small nucleolar RNA psi18S-841/snoR66 K26334 SNORA28; small nucleolar RNA SNORA28
D 126973663 small nucleolar RNA psi18S-841/snoR66 K26334 SNORA28; small nucleolar RNA SNORA28
D 126970384 small nucleolar RNA SNORA57 K28340 SNORA57; small nucleolar RNA SNORA57
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025