+D GENES KO
#
KEGG Orthology (KO) - Candidatus Liberibacter solanacearum
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lso00010]
D CKC_05480 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CKC_02925 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D CKC_02060 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CKC_04380 triosephosphate isomerase protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CKC_02050 Glyceraldehyde 3-Phosphate Dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CKC_02055 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CKC_05470 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CKC_02345 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CKC_01795 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CKC_02335 dehydrogenase, E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CKC_02330 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CKC_02325 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_03620 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CKC_01500 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:lso00020]
D CKC_02370 type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CKC_01755 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CKC_04365 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CKC_03205 alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CKC_03210 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_03200 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CKC_03195 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CKC_03170 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CKC_03175 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CKC_03160 succinate dehydrogenase protein, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CKC_03165 succinate dehydrogenase hydrophobic membrane anchor K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CKC_05075 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CKC_03190 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CKC_01500 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CKC_02335 dehydrogenase, E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CKC_02330 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CKC_02325 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:lso00030]
D CKC_02755 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CKC_02750 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CKC_00655 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CKC_04295 D-ribulose-5 phosphate 3-epimerase protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CKC_02045 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CKC_03220 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CKC_03620 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CKC_01990 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CKC_02060 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CKC_02925 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:lso00040]
D CKC_02125 UTP-glucose-1-phosphate uridylyltransferase protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CKC_04295 D-ribulose-5 phosphate 3-epimerase protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:lso00051]
D CKC_02925 pyrophosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D CKC_02060 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CKC_04380 triosephosphate isomerase protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:lso00052]
D CKC_02495 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CKC_02125 UTP-glucose-1-phosphate uridylyltransferase protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CKC_03620 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CKC_05480 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism
D CKC_04060 PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:lso00500]
D CKC_02125 UTP-glucose-1-phosphate uridylyltransferase protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CKC_03620 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CKC_05480 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lso00520]
D CKC_03040 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CKC_05640 phosphoglucosamine mutase protein K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CKC_03035 UDP-N-acetylglucosamine pyrophosphorylase protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CKC_04490 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CKC_03365 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CKC_05480 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CKC_03620 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CKC_02125 UTP-glucose-1-phosphate uridylyltransferase protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CKC_02495 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
C 00620 Pyruvate metabolism [PATH:lso00620]
D CKC_02335 dehydrogenase, E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CKC_02330 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CKC_02325 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_01795 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CKC_00155 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CKC_05400 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CKC_05405 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CKC_01465 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CKC_00125 glyoxalase II K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CKC_00855 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CKC_04950 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CKC_03190 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CKC_05075 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CKC_01500 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lso00630]
D CKC_03190 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CKC_02370 type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CKC_01755 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CKC_02760 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_05190 glutamine synthetase protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_02395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_04550 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:lso00640]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_00155 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CKC_05400 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CKC_05405 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CKC_01465 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CKC_03195 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CKC_03200 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:lso00650]
D CKC_03170 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CKC_03175 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CKC_03160 succinate dehydrogenase protein, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CKC_03165 succinate dehydrogenase hydrophobic membrane anchor K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CKC_03810 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00660 C5-Branched dibasic acid metabolism
D CKC_03195 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CKC_03200 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:lso00562]
D CKC_02170 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CKC_05050 putative inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CKC_04380 triosephosphate isomerase protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lso00190]
D CKC_04890 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CKC_04885 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CKC_04880 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CKC_04875 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CKC_04870 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CKC_04865 NADH dehydrogenase I subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CKC_04855 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CKC_04850 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CKC_04845 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CKC_04840 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CKC_04835 NADH-ubiquinone oxidoreductase, chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CKC_04830 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CKC_04825 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CKC_04820 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CKC_03170 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CKC_03175 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CKC_03160 succinate dehydrogenase protein, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CKC_03165 succinate dehydrogenase hydrophobic membrane anchor K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CKC_02145 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CKC_01615 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D CKC_01610 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D CKC_01605 cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D CKC_01600 ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D CKC_00335 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CKC_00325 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CKC_00330 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CKC_00340 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CKC_00320 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CKC_03420 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CKC_03430 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CKC_03435 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CKC_03425 H+transporting two-sector ATPase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CKC_05220 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lso00710]
D CKC_02055 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CKC_02050 Glyceraldehyde 3-Phosphate Dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CKC_02060 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CKC_02045 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CKC_03220 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D CKC_04380 triosephosphate isomerase protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CKC_04295 D-ribulose-5 phosphate 3-epimerase protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CKC_01500 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CKC_04950 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CKC_03190 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:lso00720]
D CKC_03190 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CKC_05075 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CKC_03170 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CKC_03175 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CKC_03160 succinate dehydrogenase protein, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CKC_03165 succinate dehydrogenase hydrophobic membrane anchor K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CKC_03200 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CKC_03195 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CKC_04365 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CKC_01755 aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CKC_00155 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CKC_05400 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CKC_05405 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CKC_01465 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CKC_02745 methylenetetrahydrofolate dehydrogenase/cyclohydrolase protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00680 Methane metabolism [PATH:lso00680]
D CKC_02395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CKC_02345 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CKC_03190 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CKC_02060 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CKC_05470 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CKC_05045 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CKC_03745 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:lso00910]
D CKC_02020 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CKC_02760 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_05190 glutamine synthetase protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_02015 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lso00061]
D CKC_00155 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CKC_05400 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CKC_05405 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CKC_01465 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CKC_05595 acyl carrier protein K02078 acpP; acyl carrier protein
D CKC_05605 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CKC_01520 3-oxoacyl-(acyl carrier protein) synthase II K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CKC_02840 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CKC_01700 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CKC_05590 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CKC_05600 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CKC_01705 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D CKC_01185 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CKC_01695 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CKC_04005 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:lso00074]
D CKC_03015 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CKC_05595 acyl carrier protein K02078 acpP; acyl carrier protein
D CKC_05605 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lso00561]
D CKC_02835 putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CKC_02625 putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CKC_00115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:lso00564]
D CKC_03150 putative glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CKC_02625 putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CKC_00115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CKC_01205 phosphatidate cytidylyltransferase protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CKC_04930 phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D CKC_00105 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CKC_00100 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CKC_00250 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CKC_03685 acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lso00230]
D CKC_03620 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CKC_01990 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CKC_02450 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CKC_04415 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CKC_00065 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CKC_04320 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CKC_04310 phosphoribosylformylglycinamidine synthase, PurS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CKC_04315 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CKC_00060 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CKC_05060 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CKC_05055 phosphoribosylaminoimidazole carboxylase catalytic subunit protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CKC_02905 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CKC_04305 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CKC_04300 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CKC_02010 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CKC_02290 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CKC_04730 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CKC_02240 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CKC_00400 putative deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CKC_01960 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CKC_01105 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CKC_04555 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CKC_05975 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CKC_02815 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CKC_02765 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CKC_05510 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CKC_00315 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CKC_02035 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D CKC_05260 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:lso00240]
D CKC_01810 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CKC_01930 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CKC_02635 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CKC_02630 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CKC_03840 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CKC_01840 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CKC_03845 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CKC_01745 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CKC_01220 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CKC_02240 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CKC_01430 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CKC_04370 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CKC_01725 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CKC_02290 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CKC_02035 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D CKC_01570 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CKC_02815 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CKC_02765 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CKC_02955 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CKC_04280 deoxyuridine 5 27-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CKC_03770 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lso00250]
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CKC_05230 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CKC_00440 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CKC_00315 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CKC_04300 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CKC_02635 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CKC_02020 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CKC_02760 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_05190 glutamine synthetase protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_01810 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CKC_01930 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CKC_04340 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CKC_04315 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CKC_03040 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CKC_02450 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lso00260]
D CKC_04785 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CKC_02605 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CKC_04665 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CKC_01335 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D CKC_01680 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CKC_02395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CKC_05470 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CKC_05045 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CKC_03745 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CKC_00275 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_00105 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:lso00270]
D CKC_01905 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CKC_04785 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CKC_02605 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CKC_04665 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CKC_03990 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CKC_00555 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CKC_03190 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CKC_05045 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:lso00280]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_03810 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:lso00300]
D CKC_04665 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CKC_04785 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CKC_02605 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CKC_05455 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CKC_05475 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CKC_01240 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CKC_01850 acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CKC_01245 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CKC_00625 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CKC_00445 diaminopimelate decarboxylase protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CKC_03330 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CKC_03335 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lso00310]
D CKC_03210 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_04210 L-lysine 2,3-aminomutase protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
C 00220 Arginine biosynthesis [PATH:lso00220]
D CKC_01845 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CKC_05230 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CKC_00440 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CKC_04340 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CKC_04315 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CKC_02760 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_05190 glutamine synthetase protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_01810 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CKC_01930 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CKC_02020 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CKC_02505 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CKC_01545 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CKC_05555 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CKC_01850 acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:lso00330]
D CKC_00410 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D CKC_00770 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00360 Phenylalanine metabolism
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00380 Tryptophan metabolism
D CKC_03210 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lso00400]
D CKC_01720 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
D CKC_02020 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D CKC_02975 metal-dependent hydrolase protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:lso00450]
D CKC_03270 putative aminotransferase involved in iron-sulfur cluster biogenesis K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CKC_05495 thioredoxin reductase (NADPH) protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CKC_02965 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D CKC_02395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lso00470]
D CKC_02470 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CKC_04130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CKC_04340 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CKC_04315 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CKC_04350 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CKC_03345 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CKC_00625 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CKC_00445 diaminopimelate decarboxylase protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:lso00480]
D CKC_03990 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CKC_00555 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CKC_02230 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CKC_00220 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CKC_03225 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D CKC_04365 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CKC_00655 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D CKC_02755 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:lso00540]
D CKC_01180 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CKC_04110 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CKC_01190 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CKC_01175 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CKC_01170 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CKC_02185 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CKC_04935 polysialic acid capsule expression protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CKC_02350 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CKC_01160 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CKC_02180 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lso00541]
D CKC_02125 UTP-glucose-1-phosphate uridylyltransferase protein K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CKC_02495 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CKC_04520 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CKC_04530 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CKC_04535 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CKC_04525 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CKC_03035 UDP-N-acetylglucosamine pyrophosphorylase protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:lso00550]
D CKC_04490 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CKC_03365 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CKC_03360 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CKC_03345 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CKC_03330 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CKC_04130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CKC_03335 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CKC_01210 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CKC_00215 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CKC_03340 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CKC_03355 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CKC_00825 penicillin binding peptidoglycan synthetase protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CKC_03325 penicillin-binding transmembrane protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:lso00552]
D CKC_00215 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lso00730]
D CKC_03410 putative pyridoxal-phosphate-dependent aminotransferase protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CKC_04190 putative thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CKC_05260 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:lso00740]
D CKC_02150 GTP cyclohydrolase II protein (riboflavin biosynthesis) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CKC_02400 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CKC_02410 riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CKC_02405 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CKC_04910 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:lso00750]
D CKC_04000 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CKC_05045 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CKC_02205 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CKC_01815 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CKC_01680 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lso00760]
D CKC_01735 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CKC_02290 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CKC_02075 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CKC_03290 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CKC_00835 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:lso00770]
D CKC_01505 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D CKC_00365 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CKC_05170 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CKC_01460 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CKC_03015 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism [PATH:lso00780]
D CKC_01700 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CKC_05590 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CKC_05600 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CKC_01185 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CKC_01695 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CKC_04005 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CKC_01535 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CKC_01525 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CKC_01530 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CKC_01540 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CKC_04815 birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lso00785]
D CKC_05155 lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CKC_02315 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02335 dehydrogenase, E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CKC_02330 pyruvate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CKC_02325 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CKC_03205 alpha-ketoglutarate decarboxylase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CKC_03210 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:lso00790]
D CKC_04740 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CKC_04250 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CKC_04245 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CKC_04255 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CKC_03765 dihydrofolate reductase protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CKC_01470 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CKC_02150 GTP cyclohydrolase II protein (riboflavin biosynthesis) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CKC_03120 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CKC_04405 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CKC_03115 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CKC_02420 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:lso00670]
D CKC_03765 dihydrofolate reductase protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CKC_02745 methylenetetrahydrofolate dehydrogenase/cyclohydrolase protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CKC_02395 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CKC_00065 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CKC_02010 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CKC_05565 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CKC_03770 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CKC_04550 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CKC_02040 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lso00860]
D CKC_00275 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D CKC_04170 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CKC_02380 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CKC_03140 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CKC_03135 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CKC_01425 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CKC_03595 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CKC_01420 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CKC_04395 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CKC_02145 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lso00130]
D CKC_04410 prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CKC_04790 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D CKC_04925 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D CKC_00375 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lso00900]
D CKC_03810 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D CKC_03800 hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D CKC_03815 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D CKC_03820 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D CKC_03825 diphosphomevalonate decarboxylase/isopentenyl-diphosphate delta-isomerase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D CKC_03805 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D CKC_03660 geranyltranstransferase protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CKC_00840 octaprenyl-diphosphate synthase protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CKC_01210 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:lso00906]
D CKC_04590 phytoene synthase protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CKC_02045 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:lso00523]
D CKC_04520 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CKC_04530 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CKC_04535 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CKC_04525 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D CKC_04530 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:lso00261]
D CKC_04785 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CKC_02605 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CKC_05455 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CKC_05475 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lso00521]
D CKC_05480 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CKC_03620 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CKC_02170 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CKC_05050 putative inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CKC_04520 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CKC_04530 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CKC_04535 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CKC_04525 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CKC_05480 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:lso00525]
D CKC_04520 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CKC_04530 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D CKC_05605 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CKC_05600 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CKC_01695 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CKC_04005 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CKC_05595 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CKC_01905 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lso03020]
D CKC_04985 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CKC_04980 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CKC_05245 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CKC_03010 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lso03010]
D CKC_01730 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CKC_01230 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CKC_05335 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CKC_04345 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CKC_05280 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CKC_02490 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CKC_05385 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CKC_05295 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CKC_05550 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CKC_05370 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CKC_05250 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CKC_05395 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CKC_05255 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CKC_05300 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CKC_01285 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CKC_00635 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CKC_05320 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CKC_02485 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CKC_05345 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CKC_00385 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CKC_01820 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CKC_05000 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CKC_05350 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CKC_05365 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CKC_05360 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CKC_05305 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CKC_05290 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CKC_04990 50S ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CKC_02480 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CKC_04995 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CKC_05005 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CKC_05545 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CKC_05315 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CKC_05270 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CKC_05330 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CKC_05240 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CKC_05285 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CKC_00650 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CKC_02550 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CKC_02090 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CKC_05340 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CKC_05355 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CKC_05310 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CKC_01940 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D CKC_02085 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CKC_00130 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CKC_05325 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CKC_05275 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CKC_05100 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CKC_02140 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CKC_01595 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CKC_01565 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CKC_02545 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CKC_r06095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06097 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06093 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06098 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CKC_06100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CKC_r06091 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CKC_r06089 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CKC_r06087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lso00970]
D CKC_t06009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CKC_t06061 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CKC_t06041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CKC_t06015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CKC_t06057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CKC_t06085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CKC_t06023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CKC_t06005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CKC_t06037 tRNA-OTHER K14220 tRNA-Asn; tRNA Asn
D CKC_t06065 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CKC_t06051 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CKC_t06031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CKC_t06071 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CKC_t06077 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CKC_t06027 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CKC_t05997 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CKC_t06019 tRNA-His K14226 tRNA-His; tRNA His
D CKC_t06007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CKC_t06039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CKC_t06063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CKC_t06001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CKC_t06035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CKC_t06047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CKC_t06079 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CKC_t06069 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CKC_t06081 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CKC_t06011 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06059 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06043 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06083 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06075 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06013 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CKC_t06055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CKC_t06029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CKC_t06049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CKC_t06017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CKC_t06021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CKC_t06025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CKC_t06045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CKC_t06003 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CKC_t06053 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CKC_t06073 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CKC_t05999 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CKC_t06067 tRNA-Val K14237 tRNA-Val; tRNA Val
D CKC_t06033 tRNA-Val K14237 tRNA-Val; tRNA Val
D CKC_04170 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CKC_03860 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CKC_03855 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CKC_03865 putative glutamyl-tRNA(Gln) amidotransferase subunit C protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CKC_05080 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CKC_01935 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CKC_00850 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CKC_03400 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CKC_03295 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CKC_02295 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CKC_00085 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CKC_02965 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CKC_05565 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CKC_04470 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CKC_01370 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CKC_01780 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CKC_04175 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CKC_05505 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CKC_04805 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CKC_04485 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CKC_02555 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CKC_02560 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CKC_03070 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CKC_01330 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lso03060]
D CKC_05265 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CKC_05015 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D CKC_04375 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CKC_04505 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D CKC_04165 preprotein tranlocase protein K03210 yajC; preprotein translocase subunit YajC
D CKC_01555 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CKC_02500 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CKC_00630 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CKC_00620 cell division protein K03110 ftsY; fused signal recognition particle receptor
D CKC_03020 type I signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CKC_00810 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lso04122]
D CKC_03410 putative pyridoxal-phosphate-dependent aminotransferase protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CKC_05025 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lso03018]
D CKC_00005 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CKC_00820 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CKC_02345 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CKC_01280 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CKC_00255 ATP-dependent RNA helicase protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CKC_01415 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CKC_04810 beta-lactamase domain-containing protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CKC_02105 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CKC_04895 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CKC_04160 poly(A) polymerase protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lso03030]
D CKC_01455 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CKC_05200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CKC_01150 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CKC_02960 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CKC_02235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CKC_01740 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CKC_02475 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CKC_03960 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CKC_05195 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CKC_05180 single-strand binding protein (ssb) K03111 ssb; single-strand DNA-binding protein
D CKC_01340 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CKC_03580 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CKC_04095 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lso03410]
D CKC_02270 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CKC_03585 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CKC_01575 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CKC_05695 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CKC_00380 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CKC_00780 putative uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CKC_05520 exodeoxyribonuclease III protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CKC_04660 single-stranded-DNA-specific exonuclease protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CKC_04095 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lso03420]
D CKC_03060 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CKC_05185 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CKC_03690 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CKC_00245 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CKC_03790 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CKC_04095 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lso03430]
D CKC_00815 DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D CKC_02195 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D CKC_03790 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CKC_02025 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CKC_01315 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CKC_01635 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CKC_04660 single-stranded-DNA-specific exonuclease protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CKC_05180 single-strand binding protein (ssb) K03111 ssb; single-strand DNA-binding protein
D CKC_05200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CKC_01740 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CKC_01150 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CKC_02960 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CKC_01455 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CKC_02235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CKC_04095 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lso03440]
D CKC_04660 single-stranded-DNA-specific exonuclease protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CKC_05180 single-strand binding protein (ssb) K03111 ssb; single-strand DNA-binding protein
D CKC_01165 recombination protein F K03629 recF; DNA replication and repair protein RecF
D CKC_03065 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CKC_01135 recombination protein RecR K06187 recR; recombination protein RecR
D CKC_05085 recombinase A K03553 recA; recombination protein RecA
D CKC_05680 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CKC_05675 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CKC_05685 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CKC_03050 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CKC_05200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CKC_01740 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CKC_01150 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CKC_02960 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CKC_01455 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CKC_02235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CKC_00350 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lso02010]
D CKC_00025 thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D CKC_00020 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein
D CKC_00015 thiQ; thiamine transporter ATP-binding subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D CKC_02430 substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CKC_02435 proline/glycine betaine ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D CKC_02440 proline/glycine betaine ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CKC_04970 putative ABC transporter, substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CKC_04960 ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CKC_04965 putative ATP-binding component of ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CKC_00610 putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D CKC_00605 ABC transporter, membrane spanning protein K02037 pstC; phosphate transport system permease protein
D CKC_00600 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CKC_00595 ABC transporter, nucleotide binding/ATPase protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CKC_04625 cationic amino acid ABC transporter, periplasmic binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D CKC_04630 ABC transporter membrane spanning protein (amino acid) K09970 aapQ; general L-amino acid transport system permease protein
D CKC_04635 general L-amino acid transport system permease protein K09971 aapM; general L-amino acid transport system permease protein
D CKC_04640 ABC transporter related protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CKC_03665 putative amino acid-binding periplasmic ABC transporter protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CKC_03670 amino acid ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D CKC_04690 ABC transporter membrane spanning protein (branched chain amino acid) K01998 livM; branched-chain amino acid transport system permease protein
D CKC_00660 zinc uptake ABC transporter K09815 znuA; zinc transport system substrate-binding protein
D CKC_00670 zinc uptake ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CKC_00665 putative high-affinity zinc uptake system ATP-binding component of ABC transporter protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CKC_05610 periplasmic solute binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D CKC_05620 ABC transporter, membrane spanning protein (iron) K11605 sitC; manganese/iron transport system permease protein
D CKC_05625 ABC transporter, membrane spanning protein (iron transport) K11606 sitD; manganese/iron transport system permease protein
D CKC_05615 ABC transporter, nucleotide binding/ATPase protein (iron) K11607 sitB; manganese/iron transport system ATP-binding protein
D CKC_04800 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D CKC_04795 lipoprotein-releasing system ATP-binding protein lolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CKC_02225 permease protein K07091 lptF; lipopolysaccharide export system permease protein
D CKC_02220 putative permease protein K11720 lptG; lipopolysaccharide export system permease protein
D CKC_00785 ABC transporter nucleotide binding/ATPase protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CKC_04545 ABC transporter, nucleotide binding/ATPase protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CKC_00095 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CKC_02260 Type I secretion system ATPase, PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS)
D CKC_04060 PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
C 03070 Bacterial secretion system [PATH:lso03070]
D CKC_04505 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D CKC_05015 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D CKC_04375 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CKC_05265 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CKC_04165 preprotein tranlocase protein K03210 yajC; preprotein translocase subunit YajC
D CKC_01555 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CKC_02500 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CKC_00620 cell division protein K03110 ftsY; fused signal recognition particle receptor
D CKC_00630 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lso02020]
D CKC_00610 putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D CKC_00575 serine protease DO-like protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CKC_02645 flagellin domain-containing protein K02406 fliC; flagellin
D CKC_00515 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CKC_00390 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CKC_00730 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00735 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00740 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00745 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00710 pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D CKC_00705 putative pilus assembly protein K02280 cpaC; pilus assembly protein CpaC
D CKC_00695 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D CKC_00690 component of type IV pilus K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CKC_00685 pilus assembly protein K12510 tadB; tight adherence protein B
D CKC_00680 pilus component protein K12511 tadC; tight adherence protein C
D CKC_02760 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_05190 glutamine synthetase protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_04585 two-component response regulator nitrogen regulation protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D CKC_02250 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D CKC_04715 probable two-component response regulator protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CKC_00580 putative two-component sensor histidine kinase transcriptional regulatory protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D CKC_04360 two-component sensor histidine kinase protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D CKC_01590 two component response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D CKC_01760 two-component sensor histidine kinase/response regulator hybrid protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D CKC_04720 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D CKC_04710 two component response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D CKC_02580 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D CKC_04340 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lso02024]
D CKC_04690 ABC transporter membrane spanning protein (branched chain amino acid) K01998 livM; branched-chain amino acid transport system permease protein
D CKC_02400 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CKC_01555 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CKC_04505 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D CKC_05015 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D CKC_04375 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CKC_05265 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CKC_04165 preprotein tranlocase protein K03210 yajC; preprotein translocase subunit YajC
D CKC_02500 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CKC_00620 cell division protein K03110 ftsY; fused signal recognition particle receptor
D CKC_00630 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:lso02030]
D CKC_04715 probable two-component response regulator protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CKC_00530 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D CKC_00520 flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D CKC_00525 putative flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CKC_00515 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CKC_02660 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:lso02040]
D CKC_00490 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CKC_00550 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CKC_00530 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D CKC_00505 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CKC_00460 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CKC_00520 flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D CKC_00525 putative flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CKC_00455 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CKC_02710 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CKC_02720 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CKC_02715 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CKC_00535 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CKC_00480 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CKC_00500 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CKC_00495 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CKC_02705 flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CKC_02680 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CKC_00510 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D CKC_00485 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CKC_00465 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D CKC_00475 flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D CKC_02685 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CKC_02690 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D CKC_02645 flagellin domain-containing protein K02406 fliC; flagellin
D CKC_00515 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CKC_02660 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CKC_02665 chemotaxis protein K10564 motC; chemotaxis protein MotC
D CKC_02670 hypothetical protein K10565 motD; chemotaxis protein MotD
D CKC_03665 putative amino acid-binding periplasmic ABC transporter protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CKC_05525 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CKC_02345 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lso01501]
D CKC_00825 penicillin binding peptidoglycan synthetase protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CKC_03325 penicillin-binding transmembrane protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:lso01502]
D CKC_04130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CKC_02470 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CKC_03335 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CKC_03340 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CKC_03355 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lso01503]
D CKC_02265 serralysin K01406 prtC; serralysin [EC:3.4.24.40]
D CKC_00575 serine protease DO-like protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CKC_01180 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lso01000]
C 01001 Protein kinases [BR:lso01001]
D CKC_00580 putative two-component sensor histidine kinase transcriptional regulatory protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D CKC_04360 two-component sensor histidine kinase protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D CKC_01760 two-component sensor histidine kinase/response regulator hybrid protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lso01009]
D CKC_03745 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:lso01002]
D CKC_00810 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CKC_00715 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CKC_01960 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CKC_02450 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CKC_03040 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CKC_02390 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D CKC_04945 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CKC_02265 serralysin K01406 prtC; serralysin [EC:3.4.24.40]
D CKC_02230 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CKC_01245 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CKC_04670 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CKC_00280 putative aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CKC_01320 aminopeptidase protein K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CKC_05645 metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CKC_01200 zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CKC_00575 serine protease DO-like protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CKC_05425 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CKC_05415 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CKC_02355 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CKC_03020 type I signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CKC_00800 putative protease IV transmembrane protein K04773 sppA; protease IV [EC:3.4.21.-]
D CKC_01510 ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CKC_03755 putative hydrolase serine protease transmembrane protein K04087 hflC; modulator of FtsH protease HflC
D CKC_03760 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:lso01003]
D CKC_00825 penicillin binding peptidoglycan synthetase protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lso01005]
D CKC_01180 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CKC_01170 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CKC_04110 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CKC_01190 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CKC_01175 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CKC_02185 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CKC_02180 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CKC_02350 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CKC_01160 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CKC_04935 polysialic acid capsule expression protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CKC_01800 glycosyl transferase group 1 K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lso01011]
D CKC_04490 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CKC_03365 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CKC_03360 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CKC_03345 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CKC_03330 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CKC_04130 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CKC_02470 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CKC_04350 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CKC_03340 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CKC_03355 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CKC_00215 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CKC_01325 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CKC_00825 penicillin binding peptidoglycan synthetase protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CKC_03325 penicillin-binding transmembrane protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CKC_02390 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D CKC_05585 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CKC_03000 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:lso01004]
D CKC_05605 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CKC_01520 3-oxoacyl-(acyl carrier protein) synthase II K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CKC_02840 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CKC_01700 3-oxoacyl-(acyl carrier protein) synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D CKC_05590 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CKC_05600 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CKC_01705 3-hydroxydecanoyl-(acyl carrier protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D CKC_01185 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CKC_01695 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CKC_04005 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CKC_03685 acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CKC_02835 putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CKC_02625 putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CKC_00115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:lso01006]
D CKC_03660 geranyltranstransferase protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CKC_00840 octaprenyl-diphosphate synthase protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CKC_01210 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CKC_04590 phytoene synthase protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CKC_03740 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CKC_04410 prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CKC_02145 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:lso01007]
D CKC_04170 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CKC_03070 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CKC_01330 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CKC_00085 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CKC_05505 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CKC_02965 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CKC_01780 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CKC_04470 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CKC_01370 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CKC_04175 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CKC_01935 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CKC_04485 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CKC_00850 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CKC_03400 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CKC_02295 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CKC_04805 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CKC_03295 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CKC_05080 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CKC_02555 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CKC_02560 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CKC_00265 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CKC_00275 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D CKC_01535 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CKC_01850 acetylornithine transaminase protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CKC_01525 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CKC_05045 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lso00194]
D CKC_00320 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CKC_00325 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CKC_00330 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CKC_00335 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CKC_00340 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CKC_03430 F0F1 ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CKC_03435 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CKC_03425 H+transporting two-sector ATPase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CKC_03420 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lso03000]
D CKC_00355 rirA; iron-responsive transcriptional regulator K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator
D CKC_04815 birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CKC_00140 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CKC_01390 chromosome partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CKC_01945 transcriptional regulator CarD family protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CKC_03310 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lso03021]
D CKC_05245 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CKC_04985 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CKC_04980 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CKC_03010 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CKC_05525 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CKC_00305 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D CKC_01300 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CKC_02415 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D CKC_05010 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CKC_01805 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CKC_01415 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:lso03019]
D CKC_00820 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CKC_03025 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CKC_04810 beta-lactamase domain-containing protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CKC_00255 ATP-dependent RNA helicase protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CKC_02345 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CKC_01280 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CKC_01415 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CKC_02105 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CKC_04895 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CKC_04160 poly(A) polymerase protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CKC_00005 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
C 03041 Spliceosome
C 03011 Ribosome [BR:lso03011]
D CKC_01730 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CKC_01230 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CKC_05335 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CKC_04345 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CKC_05280 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CKC_02490 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CKC_05385 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CKC_05295 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CKC_05550 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CKC_05370 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CKC_05250 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CKC_05395 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CKC_05255 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CKC_05300 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CKC_01285 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CKC_00635 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CKC_05320 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CKC_02485 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CKC_05345 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D CKC_00385 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CKC_01820 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CKC_05000 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CKC_05350 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CKC_05365 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CKC_05360 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CKC_05305 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CKC_05290 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CKC_02480 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CKC_04995 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CKC_05005 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CKC_04990 50S ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D CKC_05545 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CKC_05315 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CKC_05270 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CKC_05330 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CKC_05240 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CKC_05285 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CKC_00650 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CKC_02550 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CKC_02090 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CKC_05340 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CKC_05355 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CKC_05310 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CKC_02085 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CKC_00130 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CKC_05325 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CKC_05275 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CKC_05100 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CKC_02140 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CKC_01595 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CKC_01565 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CKC_02545 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CKC_01940 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D CKC_r06091 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CKC_r06089 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CKC_r06087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CKC_r06095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06097 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06093 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06098 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CKC_06100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lso03009]
D CKC_03025 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CKC_03030 GTP-binding protein Era K03595 era; GTPase
D CKC_02080 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D CKC_01300 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CKC_02415 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D CKC_05010 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CKC_02200 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CKC_00415 NOL1/NOP2/SUN family signature protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CKC_02005 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CKC_02165 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CKC_03985 16S rRNA m3U1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CKC_01400 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CKC_03315 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CKC_00270 tRNA/rRNA methyltransferase protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CKC_02570 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D CKC_04180 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CKC_02160 putative ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CKC_00290 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CKC_00300 RNA-pseudouridylate synthase protein, ribosomal large subunit D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CKC_00640 16S rRNA-processing protein K02860 rimM; 16S rRNA processing protein RimM
D CKC_00820 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D CKC_03870 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CKC_00255 ATP-dependent RNA helicase protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CKC_01920 GTP-binding protein EngA K03977 engA; GTPase
D CKC_01125 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CKC_01290 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CKC_01305 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CKC_00030 hypothetical protein K09710 ybeB; ribosome-associated protein
D CKC_01885 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D CKC_02930 translation-associated GTPase K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:lso03016]
D CKC_04170 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CKC_04805 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CKC_01780 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CKC_01370 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CKC_02965 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CKC_05505 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CKC_04175 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CKC_01935 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CKC_05080 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CKC_03295 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CKC_02295 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CKC_00085 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CKC_04470 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CKC_04485 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CKC_02555 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CKC_02560 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CKC_03070 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CKC_01330 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CKC_01235 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CKC_01910 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CKC_05560 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CKC_03410 putative pyridoxal-phosphate-dependent aminotransferase protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CKC_01125 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CKC_03740 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CKC_01410 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CKC_01405 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CKC_01560 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CKC_00405 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CKC_02110 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CKC_05435 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D CKC_00850 glyQ; glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CKC_03400 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CKC_02155 Cytidine/deoxycytidylate deaminase, zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CKC_04020 tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D CKC_01870 2-methylthioadenine synthetase (miaB-like) protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CKC_04355 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D CKC_00645 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CKC_05025 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CKC_03280 FeS assembly scaffold SufA K13628 iscA; iron-sulfur cluster assembly protein
D CKC_00170 aminomethyltransferase protein (glycine cleavage) K06980 ygfZ; tRNA-modifying protein YgfZ
D CKC_05165 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CKC_03115 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CKC_03120 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CKC_04405 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CKC_02420 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CKC_05160 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CKC_05650 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CKC_01865 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CKC_03145 putative DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CKC_01490 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CKC_01280 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:lso03012]
D CKC_01295 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CKC_02540 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CKC_01225 elongation factor Ts K02357 tsf; elongation factor Ts
D CKC_05020 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CKC_05375 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CKC_05380 elongation factor G K02355 fusA; elongation factor G
D CKC_04780 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CKC_01215 ribosome recycling factor K02838 frr; ribosome recycling factor
D CKC_04775 protoporphyrinogen oxidase (methyltransferase) protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CKC_02935 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CKC_01620 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CKC_04200 elongation factor P K02356 efp; elongation factor P
D CKC_04205 putative lysyl-tRNA synthetase protein K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D CKC_00830 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:lso03110]
D CKC_04595 ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CKC_04765 ATP-dependent Clp protease, ATP-binding subunit protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CKC_05420 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CKC_01515 ATP-dependent protease ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CKC_02105 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CKC_04895 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CKC_02100 molecular chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CKC_00585 heat shock protein K03687 GRPE; molecular chaperone GrpE
D CKC_00360 small heat shock protein K04080 ibpA; molecular chaperone IbpA
D CKC_04900 co-chaperonin GroES K04078 groES; chaperonin GroES
D CKC_00575 serine protease DO-like protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CKC_05645 metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CKC_03420 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CKC_03980 peptidyl prolyl cis-trans isomerase D signal peptide protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CKC_02210 peptidyl-prolyl cis-trans isomerase protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CKC_01475 thioredoxin K03671 TXN; thioredoxin
D CKC_04330 hypothetical protein K07390 grxD; monothiol glutaredoxin
C 04131 Membrane trafficking [BR:lso04131]
D CKC_02240 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CKC_02060 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CKC_02050 Glyceraldehyde 3-Phosphate Dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CKC_05470 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CKC_01795 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lso03032]
D CKC_01340 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CKC_02845 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CKC_00805 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D CKC_00390 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CKC_02475 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CKC_03960 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CKC_05195 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CKC_05180 single-strand binding protein (ssb) K03111 ssb; single-strand DNA-binding protein
D CKC_05200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CKC_01740 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CKC_02235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CKC_02960 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CKC_01455 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CKC_01150 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CKC_03580 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CKC_04095 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CKC_05175 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CKC_01435 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CKC_02375 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CKC_02950 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CKC_02610 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lso03036]
D CKC_03025 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CKC_02060 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CKC_02845 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CKC_00805 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D CKC_00390 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D CKC_04120 cell division protein K03590 ftsA; cell division protein FtsA
D CKC_03325 penicillin-binding transmembrane protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CKC_00285 cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CKC_01355 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CKC_03320 hypothetical protein K03586 ftsL; cell division protein FtsL
D CKC_04125 cell division protein K03589 ftsQ; cell division protein FtsQ
D CKC_03350 cell division protein FtsW peptidoglycan synthesis K03588 ftsW; cell division protein FtsW
D CKC_04115 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CKC_03185 AFG1-family ATPase K06916 zapE; cell division protein ZapE
D CKC_01395 chromosome partitioning protein A K03496 parA; chromosome partitioning protein
D CKC_01390 chromosome partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CKC_02375 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CKC_02950 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CKC_01405 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CKC_01400 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CKC_04750 site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CKC_00150 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CKC_02910 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CKC_01550 GTPase EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:lso03400]
D CKC_04065 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CKC_03585 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CKC_05695 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CKC_01575 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CKC_02270 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CKC_02510 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CKC_04280 deoxyuridine 5 27-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CKC_00780 putative uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CKC_00380 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CKC_05520 exodeoxyribonuclease III protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CKC_04660 single-stranded-DNA-specific exonuclease protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CKC_04095 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CKC_05185 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CKC_03690 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D CKC_00245 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D CKC_03790 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CKC_04985 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CKC_04980 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CKC_05245 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CKC_03010 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CKC_03060 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CKC_00815 DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D CKC_02195 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D CKC_02025 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D CKC_01315 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CKC_01635 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CKC_05200 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CKC_01740 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CKC_02235 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CKC_02960 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CKC_01455 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CKC_01150 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CKC_05180 single-strand binding protein (ssb) K03111 ssb; single-strand DNA-binding protein
D CKC_05085 recombinase A K03553 recA; recombination protein RecA
D CKC_05680 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CKC_05675 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CKC_05685 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CKC_00350 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CKC_02465 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CKC_01165 recombination protein F K03629 recF; DNA replication and repair protein RecF
D CKC_03050 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CKC_03065 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CKC_01135 recombination protein RecR K06187 recR; recombination protein RecR
D CKC_04100 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CKC_01480 double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CKC_01485 double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CKC_05175 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CKC_01435 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CKC_02610 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CKC_02845 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CKC_00805 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D CKC_02355 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CKC_02815 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CKC_02765 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:lso03029]
D CKC_01295 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CKC_02540 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CKC_01225 elongation factor Ts K02357 tsf; elongation factor Ts
D CKC_05020 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CKC_05375 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CKC_05380 elongation factor G K02355 fusA; elongation factor G
D CKC_03030 GTP-binding protein Era K03595 era; GTPase
D CKC_03070 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CKC_01370 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CKC_01935 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CKC_05505 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CKC_03860 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CKC_03855 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CKC_03865 putative glutamyl-tRNA(Gln) amidotransferase subunit C protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CKC_05180 single-strand binding protein (ssb) K03111 ssb; single-strand DNA-binding protein
D CKC_01195 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D CKC_02105 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CKC_00585 heat shock protein K03687 GRPE; molecular chaperone GrpE
D CKC_04895 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CKC_04900 co-chaperonin GroES K04078 groES; chaperonin GroES
D CKC_02100 molecular chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CKC_03410 putative pyridoxal-phosphate-dependent aminotransferase protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CKC_04330 hypothetical protein K07390 grxD; monothiol glutaredoxin
D CKC_02910 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CKC_02145 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CKC_01555 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CKC_05485 cytochrome-c oxidase assembly factor protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lso02000]
D CKC_04545 ABC transporter, nucleotide binding/ATPase protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CKC_00095 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CKC_05095 lipid A ABC exporter family, fused ATPase and inner membrane subunits K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CKC_02260 Type I secretion system ATPase, PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D CKC_04195 putative ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CKC_00025 thiamine transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein
D CKC_00020 thiP; thiamine transporter membrane protein K02063 thiP; thiamine transport system permease protein
D CKC_00015 thiQ; thiamine transporter ATP-binding subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D CKC_02430 substrate-binding region of ABC-type glycine betaine transport system K02002 proX; glycine betaine/proline transport system substrate-binding protein
D CKC_02435 proline/glycine betaine ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D CKC_02440 proline/glycine betaine ABC transporter, ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D CKC_00235 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CKC_00230 ABC transporter nucleotide binding/ATPase protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CKC_04970 putative ABC transporter, substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CKC_04960 ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CKC_04965 putative ATP-binding component of ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CKC_04975 putative ABC transporter protein K18480 linN; cholesterol transport system auxiliary component
D CKC_00610 putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D CKC_00605 ABC transporter, membrane spanning protein K02037 pstC; phosphate transport system permease protein
D CKC_00600 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CKC_00595 ABC transporter, nucleotide binding/ATPase protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CKC_04625 cationic amino acid ABC transporter, periplasmic binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D CKC_04630 ABC transporter membrane spanning protein (amino acid) K09970 aapQ; general L-amino acid transport system permease protein
D CKC_04635 general L-amino acid transport system permease protein K09971 aapM; general L-amino acid transport system permease protein
D CKC_04640 ABC transporter related protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CKC_03665 putative amino acid-binding periplasmic ABC transporter protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CKC_03670 amino acid ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D CKC_04690 ABC transporter membrane spanning protein (branched chain amino acid) K01998 livM; branched-chain amino acid transport system permease protein
D CKC_00660 zinc uptake ABC transporter K09815 znuA; zinc transport system substrate-binding protein
D CKC_00670 zinc uptake ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CKC_00665 putative high-affinity zinc uptake system ATP-binding component of ABC transporter protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CKC_05610 periplasmic solute binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D CKC_05620 ABC transporter, membrane spanning protein (iron) K11605 sitC; manganese/iron transport system permease protein
D CKC_05625 ABC transporter, membrane spanning protein (iron transport) K11606 sitD; manganese/iron transport system permease protein
D CKC_05615 ABC transporter, nucleotide binding/ATPase protein (iron) K11607 sitB; manganese/iron transport system ATP-binding protein
D CKC_02225 permease protein K07091 lptF; lipopolysaccharide export system permease protein
D CKC_02220 putative permease protein K11720 lptG; lipopolysaccharide export system permease protein
D CKC_00785 ABC transporter nucleotide binding/ATPase protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CKC_04800 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D CKC_04795 lipoprotein-releasing system ATP-binding protein lolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CKC_03235 ABC transporter, nucleotide binding/ATPase protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CKC_04920 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CKC_04335 probable multidrug resistance transporter protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CKC_04060 PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D CKC_00220 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CKC_00560 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CKC_00515 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CKC_02660 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CKC_05670 tolQ protein K03562 tolQ; biopolymer transport protein TolQ
D CKC_00240 outer membrane protein K16079 omp31; outer membrane immunogenic protein
D CKC_03875 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D CKC_03575 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D CKC_04480 nodulation protein (outer membrane efflux protein) K18904 nodT; outer membrane protein, multidrug efflux system
D CKC_01195 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D CKC_04105 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D CKC_00790 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D CKC_00795 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D CKC_02215 organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D CKC_01375 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D CKC_01890 hemolysin protein K06189 corC; hemolysin (HlyC) family protein
D CKC_00090 hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D CKC_02250 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D CKC_02135 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D CKC_04510 potassium-efflux system protein K26735 KEA4_5_6; K+:H+ antiporter
D CKC_01325 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CKC_02915 putative potassium uptake transport system protein K03549 kup; KUP system potassium uptake protein
D CKC_03850 putative homoserine/homoserine lactoneefflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D CKC_03350 cell division protein FtsW peptidoglycan synthesis K03588 ftsW; cell division protein FtsW
D CKC_01660 hypothetical protein K07243 FTR; high-affinity iron transporter
D CKC_01665 hypothetical protein K07224 efeO; iron uptake system component EfeO
D CKC_01670 Dyp-type peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D CKC_01650 hypothetical protein K07230 p19; periplasmic iron binding protein
D CKC_05655 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein
D CKC_05660 translocation protein TolB K03641 tolB; TolB protein
D CKC_02255 Type I secretion membrane fusion protein, HlyD K12537 hasE; membrane fusion protein, type I secretion system
C 02044 Secretion system [BR:lso02044]
D CKC_02260 Type I secretion system ATPase, PrtD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D CKC_02255 Type I secretion membrane fusion protein, HlyD K12537 hasE; membrane fusion protein, type I secretion system
D CKC_00715 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CKC_00710 pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D CKC_00705 putative pilus assembly protein K02280 cpaC; pilus assembly protein CpaC
D CKC_00700 hypothetical protein K02281 cpaD; pilus assembly protein CpaD
D CKC_00695 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D CKC_00690 component of type IV pilus K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CKC_00685 pilus assembly protein K12510 tadB; tight adherence protein B
D CKC_00680 pilus component protein K12511 tadC; tight adherence protein C
D CKC_00730 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00735 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00740 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00745 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_02715 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CKC_00535 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CKC_00550 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CKC_00505 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CKC_00525 putative flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CKC_00455 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CKC_02710 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CKC_02720 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CKC_02500 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CKC_04505 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D CKC_05015 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D CKC_04375 hypothetical protein K03075 secG; preprotein translocase subunit SecG
D CKC_05265 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CKC_00630 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CKC_00620 cell division protein K03110 ftsY; fused signal recognition particle receptor
D CKC_04165 preprotein tranlocase protein K03210 yajC; preprotein translocase subunit YajC
D CKC_01555 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system [BR:lso02022]
D CKC_02675 putative transcription regulator protein K21603 ftcR; two-component system, OmpR family, flagellar system response regulator FtcR
D CKC_04585 two-component response regulator nitrogen regulation protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D CKC_04715 probable two-component response regulator protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CKC_00580 putative two-component sensor histidine kinase transcriptional regulatory protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D CKC_04360 two-component sensor histidine kinase protein K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D CKC_01590 two component response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D CKC_01760 two-component sensor histidine kinase/response regulator hybrid protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D CKC_04710 two component response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D CKC_02580 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
C 02035 Bacterial motility proteins [BR:lso02035]
D CKC_04715 probable two-component response regulator protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CKC_00505 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CKC_00455 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CKC_02710 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CKC_02720 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CKC_02715 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CKC_00535 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CKC_00530 fliG; flagellar motor switch protein G K02410 fliG; flagellar motor switch protein FliG
D CKC_00520 flagellar motor switch protein fliM K02416 fliM; flagellar motor switch protein FliM
D CKC_00525 putative flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CKC_00550 flagellar MS-ring protein K02409 fliF; flagellar M-ring protein FliF
D CKC_00475 flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D CKC_00480 flagellar basal body P-ring biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CKC_00465 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D CKC_00460 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CKC_00490 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CKC_00500 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CKC_00495 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CKC_02705 flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CKC_00510 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D CKC_00485 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CKC_02680 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CKC_02685 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CKC_02690 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D CKC_02645 flagellin domain-containing protein K02406 fliC; flagellin
D CKC_00515 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D CKC_02660 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CKC_02665 chemotaxis protein K10564 motC; chemotaxis protein MotC
D CKC_02670 hypothetical protein K10565 motD; chemotaxis protein MotD
D CKC_03665 putative amino acid-binding periplasmic ABC transporter protein K02424 tcyA; L-cystine transport system substrate-binding protein
D CKC_02695 flagellar biosynthesis regulatory protein FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D CKC_02700 flagellar biosynthesis repressor FlbT K06601 flbT; flagellar biosynthesis repressor protein FlbT
D CKC_00730 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00735 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00740 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00745 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D CKC_00715 peptidase A24A prepilin type IV K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CKC_00710 pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D CKC_00705 putative pilus assembly protein K02280 cpaC; pilus assembly protein CpaC
D CKC_00700 hypothetical protein K02281 cpaD; pilus assembly protein CpaD
D CKC_00695 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D CKC_00690 component of type IV pilus K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lso04812]
D CKC_04115 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CKC_04120 cell division protein K03590 ftsA; cell division protein FtsA
D CKC_01395 chromosome partitioning protein A K03496 parA; chromosome partitioning protein
D CKC_01390 chromosome partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lso04147]
D CKC_02060 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CKC_02345 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CKC_02050 Glyceraldehyde 3-Phosphate Dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CKC_02055 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CKC_01795 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CKC_04895 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CKC_02105 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CKC_04730 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CKC_05020 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CKC_05375 translation elongation factor Tu K02358 tuf; elongation factor Tu
D CKC_01235 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CKC_05260 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CKC_00440 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CKC_05230 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CKC_02760 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_05190 glutamine synthetase protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CKC_02380 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CKC_02010 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CKC_03215 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_02320 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CKC_00435 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D CKC_02755 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CKC_04380 triosephosphate isomerase protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CKC_05470 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lso02048]
D CKC_01645 putative modification methylase K13581 ccrM; modification methylase [EC:2.1.1.72]
D CKC_04115 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CKC_02375 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CKC_02950 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CKC_04170 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CKC_03055 hypothetical protein K09159 cptB; antitoxin CptB
D CKC_03410 putative pyridoxal-phosphate-dependent aminotransferase protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lso01504]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lso03100]
D CKC_t06009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CKC_t06061 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CKC_t06041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CKC_t06015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CKC_t06057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CKC_t06085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CKC_t06023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CKC_t06005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CKC_t06037 tRNA-OTHER K14220 tRNA-Asn; tRNA Asn
D CKC_t06065 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CKC_t06051 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CKC_t06031 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CKC_t06071 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CKC_t06077 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CKC_t06027 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CKC_t05997 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CKC_t06019 tRNA-His K14226 tRNA-His; tRNA His
D CKC_t06007 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CKC_t06039 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CKC_t06063 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CKC_t06001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CKC_t06035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CKC_t06047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CKC_t06079 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CKC_t06069 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CKC_t06081 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CKC_t06011 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06059 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06043 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06083 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06075 tRNA-Met K14230 tRNA-Met; tRNA Met
D CKC_t06013 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CKC_t06055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CKC_t06029 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CKC_t06049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CKC_t06017 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CKC_t06021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CKC_t06025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CKC_t06045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CKC_t06003 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CKC_t06053 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CKC_t06073 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CKC_t05999 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CKC_t06067 tRNA-Val K14237 tRNA-Val; tRNA Val
D CKC_t06033 tRNA-Val K14237 tRNA-Val; tRNA Val
D CKC_r06095 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06097 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06093 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CKC_r06098 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CKC_06100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CKC_r06091 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CKC_r06089 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CKC_r06087 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CKC_04285 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D CKC_04460 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CKC_02585 hypothetical protein K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CKC_00675 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2]
D CKC_02130 ferredoxin-NADP+ reductase protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CKC_01895 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CKC_05410 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CKC_01980 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CKC_01085 putative DNA polymerase from bacteriophage origin K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D CKC_05955 putative DNA polymerase from bacteriophage origin K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D CKC_03570 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D CKC_02970 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CKC_00860 phage-related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CKC_02990 phage-related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CKC_04650 phage-related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CKC_02900 phage-related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CKC_05110 phage-related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CKC_03750 phage-related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CKC_04085 phage-related lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D CKC_00565 D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D CKC_01835 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D CKC_05570 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D CKC_01950 putative ferredoxin protein K05524 fdxA; ferredoxin
D CKC_00430 electron transfer flavoprotein beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CKC_02640 acyl-CoA dehydrogenase protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CKC_01365 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CKC_03675 glycosyl transferase family protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D CKC_03125 HemY domain-containing protein K02498 hemY; HemY protein
D CKC_00370 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D CKC_02310 hypothetical protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CKC_03300 cold shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D CKC_04600 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CKC_04685 trigger factor K03545 tig; trigger factor
D CKC_05450 SsrA-binding protein K03664 smpB; SsrA-binding protein
D CKC_04270 hypothetical protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D CKC_04675 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D CKC_01640 hypothetical protein K07460 yraN; putative endonuclease
D CKC_02620 hypothetical protein K04096 smf; DNA processing protein
D CKC_01025 P4 family phage/plasmid primase K06919 K06919; putative DNA primase/helicase
D CKC_05890 P4 family phage/plasmid primase K06919 K06919; putative DNA primase/helicase
C 99979 Viral proteins
C 99998 Others
D CKC_01140 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CKC_02520 ATP/ADP translocase K03301 TC.AAA; ATP:ADP antiporter, AAA family
C 99978 Cell growth
D CKC_00615 intracellular septation protein A K06190 ispZ; intracellular septation protein
C 99993 Cell motility
C 99995 Signaling proteins
D CKC_05225 GTP-binding protein K06207 typA; GTP-binding protein
C 99992 Structural proteins
C 99994 Others
D CKC_00590 putative phosphate transport system protein K02039 phoU; phosphate transport system protein
D CKC_02115 hypothetical protein K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CKC_02455 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D CKC_03230 cysteine desulfurase activator complex subunit SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CKC_03245 putative iron-sulfur cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD
D CKC_03795 hypothetical protein K07038 K07038; inner membrane protein
D CKC_00420 ribonuclease protein K07058 K07058; membrane protein
D CKC_03285 hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
C 99997 Function unknown
D CKC_01750 hypothetical protein K06890 K06890; uncharacterized protein
D CKC_03405 hypothetical protein K07018 K07018; uncharacterized protein
D CKC_03680 hypothetical protein K07090 K07090; uncharacterized protein
D CKC_00765 peptidase S16 lon domain protein K07157 K07157; uncharacterized protein
D CKC_04745 hypothetical protein K08998 K08998; uncharacterized protein
D CKC_00760 hypothetical protein K09791 K09791; uncharacterized protein
D CKC_00010 hypothetical protein K09798 K09798; uncharacterized protein
D CKC_02920 hypothetical protein K09799 K09799; uncharacterized protein
D CKC_01625 zinc-binding protein K09862 K09862; uncharacterized protein
D CKC_03775 hypothetical protein K09985 K09985; uncharacterized protein
D CKC_01360 putative cytoplasmic protein K09987 K09987; uncharacterized protein
D CKC_04475 hypothetical protein K09991 K09991; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 23, 2024