+E Transcription factors KO #

  Transcription Factors - Lysinibacillus sphaericus

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D Bsph_p123 Modification methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Bsph_p029 Modification methylase PspPI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Bsph_0497 Modification methylase BsuRI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Bsph_3739 Modification methylase SPRI K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D Bsph_4487 Putative HTH-type transcriptional regulator K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D Bsph_2916 ybbB; YbbB, ABC-type Fe3+-hydroxamate transport system, periplasmic component K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D Bsph_0707 ybbB; ABC-type Fe3+-hydroxamate transport system, periplasmic component K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D Bsph_0701 ybbB; YbbB, ABC-type Fe3+-hydroxamate transport system, periplasmic component K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D Bsph_0702 ybbB; YbbB, ABC-type Fe3+-hydroxamate transport system, periplasmic component K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D Bsph_1734 transcriptional regulator, AraC/XylS family K13653 K13653; AraC family transcriptional regulator D Bsph_2494 ydeE; transcriptional regulator (AraC/XylS family) K13653 K13653; AraC family transcriptional regulator D Bsph_3223 Right origin-binding protein K13653 K13653; AraC family transcriptional regulator D Bsph_4473 transcriptional regulator (AraC/XylS family) K13653 K13653; AraC family transcriptional regulator D Bsph_2931 adaA; methylphosphotriester-DNA alkyltransferase / transcriptional regulator (AraC family) K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D Bsph_1999 adaA; methylphosphotriester-DNA alkyltransferase K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] C LysR family D Bsph_0550 gltC; GltC K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D Bsph_3233 gltC; HTH-type transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D Bsph_1758 conserved hypothetical protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Bsph_0636 Putative HTH-type transcriptional regulator ycf30 K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Bsph_4675 ywfK; YwfK K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D Bsph_4676 ywfK; Putative HTH-type transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D Bsph_1649 Putative HTH-type transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D Bsph_1022 sigma-E- and sigma-K-dependent transcriptional regulator K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D Bsph_1356 iolR; DNA-binding protein K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor D Bsph_3705 yqzB; YqzB K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D Bsph_4200 Glucose-resistance amylase regulator (Catabolite control protein A, CcpA) K02529 galR; LacI family transcriptional regulator, galactose operon repressor D Bsph_3379 HTH-type transcriptional repressor purR (Purine nucleotide synthesis repressor) K02529 galR; LacI family transcriptional regulator, galactose operon repressor C GntR family D Bsph_3898 transcriptional regulator (GntR family) K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D Bsph_1255 yurK; Hypothetical transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D Bsph_1616 ymfC; Hypothetical transcriptional regulator K03710 K03710; GntR family transcriptional regulator D Bsph_4133 gntR; transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Bsph_0020 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Bsph_2404 transcriptional regulator (GntR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Bsph_4738 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Bsph_0780 ydeL; YdeL K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D Bsph_4717 Gluconate operon transcriptional repressor (P28 protein) K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor C TetR/AcrR family D Bsph_4063 ysiA; YsiA K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D Bsph_1852 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D Bsph_2591 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Bsph_2803 HTH transcriptional regulator TetR/AcrR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Bsph_1131 ydgC; YdgC K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D Bsph_1815 yxaF; Putative HTH-type transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor C Lrp/AsnC family D Bsph_4514 lrpC; HTH-type transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bsph_2758 Bkd operon transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Bsph_3049 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D Bsph_4050 gerE; Germination protein K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein C MarR family D Bsph_2169 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D Bsph_0398 Protease production regulatory protein hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr D Bsph_1291 transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D Bsph_0150 putative transcriptional regulator MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D Bsph_2061 regulatory protein, MarR K18909 mepR; MarR family transcriptional regulator, repressor for mepA D Bsph_3210 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Bsph_4049 ysmB; transcriptional regulator (MarR family) K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Bsph_4708 conserved hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D Bsph_1667 glnR; HTH-type transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D Bsph_3650 regulatory protein, MerR K11923 cueR; MerR family transcriptional regulator, copper efflux regulator D Bsph_2371 transcriptional regulator, MarR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D Bsph_3517 Multidrug-efflux transporter 1 regulator K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene C Fur family D Bsph_1708 Ferric uptake regulation protein (Ferric uptake regulator) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Bsph_3672 Transcriptional regulator ZurR (Zinc uptake regulator) K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D Bsph_0335 Peroxide operon regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family D Bsph_1498 kdgR; Transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D Bsph_3037 Regulatory protein nsr K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator C Rrf2 family D Bsph_4419 nsrR; HTH-type transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D Bsph_3885 yrzC; Putative HTH-type transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D Bsph_2624 conserved hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Bsph_2990 conserved hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Bsph_4334 hypothetical protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Bsph_0025 yozA; YozA K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D Bsph_1196 transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D Bsph_3463 ydcN; Putative HTH-type transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D Bsph_2884 transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family D Bsph_4704 conserved hypothetical protein K10947 K10947; PadR family transcriptional regulator D Bsph_1986 transcription regulator (putative) K10947 K10947; PadR family transcriptional regulator C Other families D Bsph_4331 mntR; Transcriptional regulator mntR (Manganese transport regulator) K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Bsph_3222 conserved hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D Bsph_1983 birA; Bifunctional protein birA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Bsph_0342 Transcriptional activator nprA K20480 nprR; HTH-type transcriptional regulator, quorum sensing regulator NprR D Bsph_3029 conserved hypothetical protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D Bsph_0066 Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D Bsph_0515 conserved hypothetical protein K26990 rsoA; sigma-O factor regulatory protein RsoA D Bsph_0380 conserved hypothetical protein K02647 cdaR; carbohydrate diacid regulator D Bsph_0621 transcriptional regulator (NtrC/NifA family) K06714 rocR; arginine utilization regulatory protein D Bsph_1129 rocR; Arginine utilization regulatory protein K06714 rocR; arginine utilization regulatory protein D Bsph_0129 Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor D Bsph_1546 GTP-sensing transcriptional pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor D Bsph_4161 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator D Bsph_2375 transcriptional regulator, Cro/CI family K07727 K07727; putative transcriptional regulator D Bsph_2297 predicted transcriptional regulator K07727 K07727; putative transcriptional regulator D Bsph_3551 conserved hypothetical protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family D Bsph_4301 conserved hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family C Others D Bsph_0027 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Bsph_2222 conserved hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Bsph_0919 conserved hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Bsph_2896 Purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D Bsph_1808 conserved hypothetical protein K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D Bsph_2006 possible transcriptional regulator from leucine-rich protein (LRPR) family K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D Bsph_0057 abrB; Transition state regulatory protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Bsph_p113 abrB; Transition state regulatory protein K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D Bsph_0076 Stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D Bsph_4776 Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Bsph_4778 Protein yyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Bsph_0240 Glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator D Bsph_3507 Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D Bsph_3800 Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor D Bsph_4652 ctsR; Transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D Bsph_0463 Central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator D Bsph_1931 mtrB; Transcription attenuation protein mtrB (Tryptophan RNA-binding attenuator protein) (Trp RNA-binding attenuation protein) (TRAP) K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D Bsph_1459 PyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Bsph_0949 conserved hypothetical protein K06314 rsfA; prespore-specific regulator D Bsph_1421 conserved hypothetical protein K06314 rsfA; prespore-specific regulator D Bsph_2056 conserved hypothetical protein K06315 splA; transcriptional regulator of the spore photoproduct lyase operon D Bsph_2658 Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator D Bsph_4283 Hypothetical yteA protein K06204 dksA; RNA polymerase-binding transcription factor D Bsph_4106 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR D Bsph_1178 comK; competence transcription factor (CTF) K02250 comK; competence protein ComK D Bsph_1180 transcription regulator K02250 comK; competence protein ComK D Bsph_1425 Protein mraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0