+D
#
Spliceosome - Lonchura striata domestica (Bengalese finch)
%
!
ACommon components
B Common spliceosomal components
C Cap binding complex
D 110474051 NCBP1; nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
D 110472684 nuclear cap-binding protein subunit 2 isoform X1 K12883 NCBP2; nuclear cap-binding protein subunit 2
D 110473885 NCBP2; nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C hnRNP proteins
D 110479592 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D 110482857 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
D 110481131 HNRNPC; heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1 K12884 HNRNPC; heterogeneous nuclear ribonucleoprotein C1/C2
D 110476873 RBMX; RNA-binding motif protein, X chromosome isoform X1 K12885 RBMX; heterogeneous nuclear ribonucleoprotein G
D 110472601 HNRNPK; heterogeneous nuclear ribonucleoprotein K isoform X1 K12886 HNRNPK; heterogeneous nuclear ribonucleoprotein K
D 110479128 HNRNPM; heterogeneous nuclear ribonucleoprotein M isoform X1 K12887 HNRNPM; heterogeneous nuclear ribonucleoprotein M
D 110481702 HNRNPU; heterogeneous nuclear ribonucleoprotein U K12888 HNRNPU; heterogeneous nuclear ribonucleoprotein U
C SR proteins
D 110471945 SRSF1; serine/arginine-rich splicing factor 1 K12890 SRSF1; serine/arginine-rich splicing factor 1
D 110479604 SRSF2; serine/arginine-rich splicing factor 2 K12891 SRSF2_8; serine/arginine-rich splicing factor 2/8
D 110473041 SRSF3; serine/arginine-rich splicing factor 3 K12892 SRSF3; serine/arginine-rich splicing factor 3
D 110476082 SRSF5; serine/arginine-rich splicing factor 5 isoform X1 K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D 110469530 SRSF4; serine/arginine-rich splicing factor 4 K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D 110474003 serine/arginine-rich splicing factor 5 K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D 110480272 SRSF6; serine/arginine-rich splicing factor 6 K12893 SRSF4_5_6; serine/arginine-rich splicing factor 4/5/6
D 110474841 serine/arginine-rich splicing factor 7 isoform X1 K12896 SRSF7; serine/arginine-rich splicing factor 7
D 110474844 SRSF7; serine/arginine-rich splicing factor 7 K12896 SRSF7; serine/arginine-rich splicing factor 7
D 110483991 SRSF10; serine/arginine-rich splicing factor 10 isoform X1 K12900 SRSF10; serine/arginine-rich splicing factor 10
D 110476473 TRA2B; transformer-2 protein homolog beta isoform X1 K12897 TRA2; transformer-2 protein
D 110474656 TRA2A; transformer-2 protein homolog alpha isoform X1 K12897 TRA2; transformer-2 protein
C General mRNP proteins
D 110483322 BCLAF1; bcl-2-associated transcription factor 1 isoform X1 K13087 BCLAF1; bcl2 associated transcription factor 1
D 110469458 ELAVL1; ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
D 110476817 ILF2; interleukin enhancer-binding factor 2 isoform X2 K13089 ILF2; interleukin enhancer-binding factor 2
D 110481101 ILF3; interleukin enhancer-binding factor 3 isoform X1 K13090 ILF3; interleukin enhancer-binding factor 3
D 110473804 RBM39; RNA-binding protein 39 K13091 RBM23_39; RNA-binding protein 23/39
D 110484569 probable RNA-binding protein 23 K13091 RBM23_39; RNA-binding protein 23/39
D 110472238 YBX1; Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
D 110468780 ZC3H18; zinc finger CCCH domain-containing protein 18 isoform X1 K13092 ZC3H18; nuclear protein NHN1
#
AComplex A
B U1 snRNP components
C Sm proteins
D 110476161 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 110483366 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 110481324 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 110475002 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 110469385 SNRPF; LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 110478618 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D 110481263 SNRNP70; U1 small nuclear ribonucleoprotein 70 kDa K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D 110481749 SNRPA; U1 small nuclear ribonucleoprotein A isoform X1 K11091 SNRPA; U1 small nuclear ribonucleoprotein A
D 116184421 LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein B''-like K11091 SNRPA; U1 small nuclear ribonucleoprotein A
D 110473428 SNRPC; U1 small nuclear ribonucleoprotein C isoform X1 K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D 110474209 DDX5; probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 110473134 PRPF40A; pre-mRNA-processing factor 40 homolog A isoform X1 K12821 PRPF40; pre-mRNA-processing factor 40
D 110472140 RBM25; RNA-binding protein 25 isoform X1 K12822 RBM25; RNA-binding protein 25
D 110477363 TCERG1; transcription elongation regulator 1 isoform X1 K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D 110476161 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 110483366 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 110481324 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 110475002 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 110469385 SNRPF; LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 110478618 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D 110482956 SNRPA1; U2 small nuclear ribonucleoprotein A' K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D 110482928 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D 110474139 SF3A1; splicing factor 3A subunit 1 isoform X1 K12825 SF3A1; splicing factor 3A subunit 1
D 110469519 SF3A2; splicing factor 3A subunit 2 K12826 SF3A2; splicing factor 3A subunit 2
D 110484230 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D 110484613 SF3B1; splicing factor 3B subunit 1 isoform X1 K12828 SF3B1; splicing factor 3B subunit 1
D 110480574 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2
D 110476277 SF3B3; splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D 110476812 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4
D 110483297 SF3B5; splicing factor 3B subunit 5 K12832 SF3B5; splicing factor 3B subunit 5
D 110470267 SF3B6; splicing factor 3B subunit 6 K12833 SF3B14; pre-mRNA branch site protein p14
D 110474822 DDX42; ATP-dependent RNA helicase DDX42 K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D 110483154 PHF5A; PHD finger-like domain-containing protein 5A K12834 PHF5A; PHD finger-like domain-containing protein 5A
C U2 related factors
D 110479442 U2AF1; splicing factor U2AF 35 kDa subunit isoform X1 K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D 110480172 U2AF2; splicing factor U2AF 65 kDa subunit K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D 110475741 CHERP; calcium homeostasis endoplasmic reticulum protein isoform X1 K12841 CHERP; calcium homeostasis endoplasmic reticulum protein
D 110484054 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 110481081 DDX46; probable ATP-dependent RNA helicase DDX46 K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D 110478063 PUF60; poly(U)-binding-splicing factor PUF60 isoform X1 K12838 PUF60; poly(U)-binding-splicing factor PUF60
D 110470913 RBM17; splicing factor 45 isoform X1 K12840 RBM17; splicing factor 45
D 110473623 SMNDC1; survival of motor neuron-related-splicing factor 30 K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D 110473933 U2SURP; U2 snRNP-associated SURP motif-containing protein isoform X1 K12842 SR140; U2-associated protein SR140
D 110483367 RP9; retinitis pigmentosa 9 protein K19604 RP9; retinitis pigmentosa 9 protein
D 110471610 ZRSR2; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 K24273 ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
B Other components
C Complex A specific factors
D 110468431 BUB3; mitotic checkpoint protein BUB3 K02180 BUB3; cell cycle arrest protein BUB3
D 110470319 cyclin-dependent kinase 11B K08818 CDC2L; cell division cycle 2-like [EC:2.7.11.22]
D 110476871 HTATSF1; HIV Tat-specific factor 1 K13093 HTATSF1; HIV Tat-specific factor 1
D 110472102 RBM5; RNA-binding protein 5 K13094 RBM5_10; RNA-binding protein 5/10
D 110481729 RNA-binding protein 10-like K13094 RBM5_10; RNA-binding protein 5/10
D 110477368 SF1; splicing factor 1 K13095 SF1; splicing factor 1
D 110469879 TET1; methylcytosine dioxygenase TET1 isoform X1 K13097 TET1; methylcytosine dioxygenase [EC:1.14.11.80]
D 110468263 RBM20; RNA-binding protein 20 isoform X1 K24052 RBM20; RNA-binding protein 20
#
AComplex B
B U1 snRNP components
C Sm proteins
D 110476161 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 110483366 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 110481324 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 110475002 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 110469385 SNRPF; LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 110478618 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U1 snRNP specific factors
D 110481263 SNRNP70; U1 small nuclear ribonucleoprotein 70 kDa K11093 SNRP70; U1 small nuclear ribonucleoprotein 70kDa
D 110481749 SNRPA; U1 small nuclear ribonucleoprotein A isoform X1 K11091 SNRPA; U1 small nuclear ribonucleoprotein A
D 116184421 LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein B''-like K11091 SNRPA; U1 small nuclear ribonucleoprotein A
D 110473428 SNRPC; U1 small nuclear ribonucleoprotein C isoform X1 K11095 SNRPC; U1 small nuclear ribonucleoprotein C
C U1 related factors
D 110474209 DDX5; probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 110473134 PRPF40A; pre-mRNA-processing factor 40 homolog A isoform X1 K12821 PRPF40; pre-mRNA-processing factor 40
D 110472140 RBM25; RNA-binding protein 25 isoform X1 K12822 RBM25; RNA-binding protein 25
D 110477363 TCERG1; transcription elongation regulator 1 isoform X1 K12824 TCERG1; transcription elongation regulator 1
B U2 snRNP components
C Sm proteins
D 110476161 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 110483366 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 110481324 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 110475002 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 110469385 SNRPF; LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 110478618 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U2 snRNP specific factors
D 110482956 SNRPA1; U2 small nuclear ribonucleoprotein A' K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D 110482928 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D 110474139 SF3A1; splicing factor 3A subunit 1 isoform X1 K12825 SF3A1; splicing factor 3A subunit 1
D 110469519 SF3A2; splicing factor 3A subunit 2 K12826 SF3A2; splicing factor 3A subunit 2
D 110484230 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D 110484613 SF3B1; splicing factor 3B subunit 1 isoform X1 K12828 SF3B1; splicing factor 3B subunit 1
D 110480574 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2
D 110476277 SF3B3; splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D 110476812 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4
D 110483297 SF3B5; splicing factor 3B subunit 5 K12832 SF3B5; splicing factor 3B subunit 5
D 110470267 SF3B6; splicing factor 3B subunit 6 K12833 SF3B14; pre-mRNA branch site protein p14
D 110474822 DDX42; ATP-dependent RNA helicase DDX42 K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D 110483154 PHF5A; PHD finger-like domain-containing protein 5A K12834 PHF5A; PHD finger-like domain-containing protein 5A
C U2 related factors
D 110479442 U2AF1; splicing factor U2AF 35 kDa subunit isoform X1 K12836 U2AF1; splicing factor U2AF 35 kDa subunit
D 110480172 U2AF2; splicing factor U2AF 65 kDa subunit K12837 U2AF2; splicing factor U2AF 65 kDa subunit
D 110475741 CHERP; calcium homeostasis endoplasmic reticulum protein isoform X1 K12841 CHERP; calcium homeostasis endoplasmic reticulum protein
D 110484054 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 110481081 DDX46; probable ATP-dependent RNA helicase DDX46 K12811 DDX46; ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
D 110478063 PUF60; poly(U)-binding-splicing factor PUF60 isoform X1 K12838 PUF60; poly(U)-binding-splicing factor PUF60
D 110470913 RBM17; splicing factor 45 isoform X1 K12840 RBM17; splicing factor 45
D 110473623 SMNDC1; survival of motor neuron-related-splicing factor 30 K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D 110473933 U2SURP; U2 snRNP-associated SURP motif-containing protein isoform X1 K12842 SR140; U2-associated protein SR140
D 110483367 RP9; retinitis pigmentosa 9 protein K19604 RP9; retinitis pigmentosa 9 protein
D 110471610 ZRSR2; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 K24273 ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
B U4/U6.U5 tri-snRNP components
C Sm proteins
D 110476161 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 110483366 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 110481324 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 110475002 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 110469385 SNRPF; LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 110478618 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D 110471382 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
D 110478478 LSM4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
D 110479134 LSM5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
D 110480900 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
D 110469489 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
D 110483506 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
C U4/U6 snRNP specific factors
D 110476825 PRPF3; U4/U6 small nuclear ribonucleoprotein Prp3 K12843 PRPF3; U4/U6 small nuclear ribonucleoprotein PRP3
D 110472210 PRPF4; U4/U6 small nuclear ribonucleoprotein Prp4 K12662 PRPF4; U4/U6 small nuclear ribonucleoprotein PRP4
D 110472236 PPIH; peptidyl-prolyl cis-trans isomerase H isoform X1 K09567 PPIH; peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]
D 110482831 PRPF31; U4/U6 small nuclear ribonucleoprotein Prp31 K12844 PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31
D 110483117 SNU13; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
D 110478181 SART3; squamous cell carcinoma antigen recognized by T-cells 3 K22611 SART3; squamous cell carcinoma antigen recognized by T-cells 3
C U5 snRNP specific factors
D 110475623 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D 110468962 PRPF6; pre-mRNA-processing factor 6 K12855 PRPF6; pre-mRNA-processing factor 6
D 110482094 PRPF8; pre-mRNA-processing-splicing factor 8 K12856 PRPF8; pre-mRNA-processing factor 8
D 110469546 SNRNP40; U5 small nuclear ribonucleoprotein 40 kDa protein K12857 SNRNP40; Prp8 binding protein
D 110478258 SNRNP200; U5 small nuclear ribonucleoprotein 200 kDa helicase K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D 110480388 DDX23; probable ATP-dependent RNA helicase DDX23 isoform X1 K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
D 110483437 TXNL4A; thioredoxin-like protein 4A K12859 TXNL4A; U5 snRNP protein, DIM1 family
C U4/U6.U5 tri-snRNP specific factors
D 110480567 SART1; U4/U6.U5 tri-snRNP-associated protein 1 K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
D 110478615 USP39; U4/U6.U5 tri-snRNP-associated protein 2 K12847 USP39; U4/U6.U5 tri-snRNP-associated protein 2
D 110478620 SNRNP27; U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein K12846 SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3
C U4/U6.U5 tri-snRNP related factors
D 110471327 ZMAT2; zinc finger matrin-type protein 2 K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D 110470608 PRPF38A; pre-mRNA-splicing factor 38A K12849 PRPF38A; pre-mRNA-splicing factor 38A
D 110479656 PRPF38B; pre-mRNA-splicing factor 38B K12850 PRPF38B; pre-mRNA-splicing factor 38B
D 110482847 CWC22; pre-mRNA-splicing factor CWC22 homolog K13100 CWC22; pre-mRNA-splicing factor CWC22
D 110482312 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D 110472842 HSPB1; heat shock protein beta-1 K04455 HSPB1; heat shock protein beta-1
D 110481374 PPIL2; RING-type E3 ubiquitin-protein ligase PPIL2 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D 110472551 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 110469723 ZNF830; zinc finger protein 830 K13104 ZNF830; zinc finger protein 830
D 110483367 RP9; retinitis pigmentosa 9 protein K19604 RP9; retinitis pigmentosa 9 protein
B Other components
C Prp19 complex
D 110484943 PRPF19; pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 110468942 CDC5L; cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 110473074 BCAS2; pre-mRNA-splicing factor SPF27 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 110470501 PLRG1; pleiotropic regulator 1 K12862 PLRG1; pleiotropic regulator 1
D 110478397 CWC15; spliceosome-associated protein CWC15 homolog K12863 CWC15; protein CWC15
D 110479797 CTNNBL1; beta-catenin-like protein 1 K12864 CTNNBL1; beta-catenin-like protein 1
D 110476561 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 110483121 WBP11; WW domain-binding protein 11 K12866 WBP11; WW domain-binding protein 11
C Prp19-related factors
D 110477255 SNW1; SNW domain-containing protein 1 K06063 SNW1; SNW domain-containing protein 1
D 110472873 SYF2; pre-mRNA-splicing factor SYF2 K12868 SYF2; pre-mRNA-splicing factor SYF2
D 110477517 CRNKL1; crooked neck-like protein 1 K12869 CRN; crooked neck
D 110482960 LOW QUALITY PROTEIN: crooked neck-like protein 1 K12869 CRN; crooked neck
D 110475284 AQR; RNA helicase aquarius K12874 AQR; intron-binding protein aquarius
D 110481175 BUD31; protein BUD31 homolog K12873 BUD31; bud site selection protein 31
D 110476934 CCDC12; coiled-coil domain-containing protein 12 isoform X1 K12871 CCDC12; coiled-coil domain-containing protein 12
D 110470664 ISY1; pre-mRNA-splicing factor ISY1 homolog isoform X1 K12870 ISY1; pre-mRNA-splicing factor ISY1
D 110475313 PPIE; peptidyl-prolyl cis-trans isomerase E K09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
D 110480036 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D 110471502 PRCC; proline-rich protein PRCC K13105 PRCC; proline-rich protein PRCC
D 110482751 RBM22; pre-mRNA-splicing factor RBM22 K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
D 110471479 KHDC4; KH homology domain-containing protein 4 isoform X1 K25780 KHDC4; kelch domain-containing protein 4
C RES complex
D 110470478 BUD13; BUD13 homolog isoform X2 K13106 BUD13; pre-mRNA-splicing factor CWC26
D 110480094 RNA-binding motif protein, X-linked 2 K13107 RBMX2; RNA-binding motif protein, X-linked 2
D 110477970 RNA-binding motif protein, X-linked 2-like K13107 RBMX2; RNA-binding motif protein, X-linked 2
D 110484275 SNIP1; smad nuclear-interacting protein 1 K13108 SNIP1; smad nuclear-interacting protein 1
C Complex B specific factors
D 110471332 IK; protein Red K13109 IK; IK cytokine
D 110476672 MFAP1; microfibrillar-associated protein 1 K13110 MFAP1; microfibrillar-associated protein 1
D 110474038 SMU1; WD40 repeat-containing protein SMU1 K13111 SMU1; WD40 repeat-containing protein SMU1
D 110484252 THRAP3; thyroid hormone receptor-associated protein 3 isoform X1 K13112 THRAP3; thyroid hormone receptor-associated protein 3
D 110484684 UBL5; ubiquitin-like protein 5 K13113 UBL5; ubiquitin-like protein 5
#
AComplex C
B U2 snRNP components
C Sm proteins
D 110476161 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 110483366 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 110481324 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 110475002 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 110469385 SNRPF; LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 110478618 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C LSm proteins
D 110471382 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
C U2 SnRNP specific factors
D 110482956 SNRPA1; U2 small nuclear ribonucleoprotein A' K11092 SNRPA1; U2 small nuclear ribonucleoprotein A'
D 110482928 SNRPB2; U2 small nuclear ribonucleoprotein B'' K11094 SNRPB2; U2 small nuclear ribonucleoprotein B''
D 110474139 SF3A1; splicing factor 3A subunit 1 isoform X1 K12825 SF3A1; splicing factor 3A subunit 1
D 110469519 SF3A2; splicing factor 3A subunit 2 K12826 SF3A2; splicing factor 3A subunit 2
D 110484230 SF3A3; splicing factor 3A subunit 3 K12827 SF3A3; splicing factor 3A subunit 3
D 110484613 SF3B1; splicing factor 3B subunit 1 isoform X1 K12828 SF3B1; splicing factor 3B subunit 1
D 110480574 SF3B2; splicing factor 3B subunit 2 K12829 SF3B2; splicing factor 3B subunit 2
D 110476277 SF3B3; splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D 110476812 SF3B4; splicing factor 3B subunit 4 K12831 SF3B4; splicing factor 3B subunit 4
D 110483297 SF3B5; splicing factor 3B subunit 5 K12832 SF3B5; splicing factor 3B subunit 5
D 110470267 SF3B6; splicing factor 3B subunit 6 K12833 SF3B14; pre-mRNA branch site protein p14
D 110474822 DDX42; ATP-dependent RNA helicase DDX42 K12835 DDX42; ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
D 110483154 PHF5A; PHD finger-like domain-containing protein 5A K12834 PHF5A; PHD finger-like domain-containing protein 5A
B U4/U6.U5 tri-snRNP components
C Sm proteins
D 110476161 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
D 110483366 SNRPD1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
D 110481324 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
D 110475002 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
D 110469385 SNRPF; LOW QUALITY PROTEIN: small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
D 110478618 SNRPG; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C U5 SnRNP specific factors
D 110475623 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component K12852 EFTUD2; 116 kDa U5 small nuclear ribonucleoprotein component
D 110478258 SNRNP200; U5 small nuclear ribonucleoprotein 200 kDa helicase K12854 SNRNP200; pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
D 110468962 PRPF6; pre-mRNA-processing factor 6 K12855 PRPF6; pre-mRNA-processing factor 6
D 110482094 PRPF8; pre-mRNA-processing-splicing factor 8 K12856 PRPF8; pre-mRNA-processing factor 8
D 110469546 SNRNP40; U5 small nuclear ribonucleoprotein 40 kDa protein K12857 SNRNP40; Prp8 binding protein
D 110480388 DDX23; probable ATP-dependent RNA helicase DDX23 isoform X1 K12858 DDX23; ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
C U4/U6.U5 tri-SnRNP specific factors
D 110480567 SART1; U4/U6.U5 tri-snRNP-associated protein 1 K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
C U4/U6.U5 tri-SnRNP related factors
D 110471327 ZMAT2; zinc finger matrin-type protein 2 K12848 SNU23; U4/U6.U5 tri-snRNP component SNU23
D 110470608 PRPF38A; pre-mRNA-splicing factor 38A K12849 PRPF38A; pre-mRNA-splicing factor 38A
D 110479656 PRPF38B; pre-mRNA-splicing factor 38B K12850 PRPF38B; pre-mRNA-splicing factor 38B
D 110482847 CWC22; pre-mRNA-splicing factor CWC22 homolog K13100 CWC22; pre-mRNA-splicing factor CWC22
D 110482312 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 K12813 DHX16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
D 110472842 HSPB1; heat shock protein beta-1 K04455 HSPB1; heat shock protein beta-1
D 110481374 PPIL2; RING-type E3 ubiquitin-protein ligase PPIL2 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D 110472551 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 110469723 ZNF830; zinc finger protein 830 K13104 ZNF830; zinc finger protein 830
D 110484054 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 110478206 TFIP11; tuftelin-interacting protein 11 K13103 TFIP11; tuftelin-interacting protein 11
D 110483367 RP9; retinitis pigmentosa 9 protein K19604 RP9; retinitis pigmentosa 9 protein
B Other components
C Prp19-CDC5 complex
D 110484943 PRPF19; pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 110468942 CDC5L; cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 110473074 BCAS2; pre-mRNA-splicing factor SPF27 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 110479797 CTNNBL1; beta-catenin-like protein 1 K12864 CTNNBL1; beta-catenin-like protein 1
D 110478397 CWC15; spliceosome-associated protein CWC15 homolog K12863 CWC15; protein CWC15
D 110470501 PLRG1; pleiotropic regulator 1 K12862 PLRG1; pleiotropic regulator 1
D 110476561 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Prp19-related factors
D 110477255 SNW1; SNW domain-containing protein 1 K06063 SNW1; SNW domain-containing protein 1
D 110472873 SYF2; pre-mRNA-splicing factor SYF2 K12868 SYF2; pre-mRNA-splicing factor SYF2
D 110477517 CRNKL1; crooked neck-like protein 1 K12869 CRN; crooked neck
D 110482960 LOW QUALITY PROTEIN: crooked neck-like protein 1 K12869 CRN; crooked neck
D 110475284 AQR; RNA helicase aquarius K12874 AQR; intron-binding protein aquarius
D 110481175 BUD31; protein BUD31 homolog K12873 BUD31; bud site selection protein 31
D 110476934 CCDC12; coiled-coil domain-containing protein 12 isoform X1 K12871 CCDC12; coiled-coil domain-containing protein 12
D 110470664 ISY1; pre-mRNA-splicing factor ISY1 homolog isoform X1 K12870 ISY1; pre-mRNA-splicing factor ISY1
D 110480036 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 K12733 PPIL1; peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]
D 110475313 PPIE; peptidyl-prolyl cis-trans isomerase E K09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
D 110482751 RBM22; pre-mRNA-splicing factor RBM22 K12872 RBM22; pre-mRNA-splicing factor RBM22/SLT11
C RES complex
D 110470478 BUD13; BUD13 homolog isoform X2 K13106 BUD13; pre-mRNA-splicing factor CWC26
D 110480094 RNA-binding motif protein, X-linked 2 K13107 RBMX2; RNA-binding motif protein, X-linked 2
D 110477970 RNA-binding motif protein, X-linked 2-like K13107 RBMX2; RNA-binding motif protein, X-linked 2
D 110484275 SNIP1; smad nuclear-interacting protein 1 K13108 SNIP1; smad nuclear-interacting protein 1
C EJC/TREX
D 110483887 spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
D 110474849 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D 110471202 CCDC174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
D 110470175 MAGOH; protein mago nashi homolog K12877 MAGOH; protein mago nashi
D 110477208 PNN; pinin K13114 PNN; pinin
D 110467861 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A
D 110467863 RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A
D 110482377 THOC1; THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1
D 110480493 THOC2; THO complex subunit 2 isoform X2 K12879 THOC2; THO complex subunit 2
D 110470796 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
D 110472418 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
C Step II factors
D 110483687 CDC40; pre-mRNA-processing factor 17 K12816 CDC40; pre-mRNA-processing factor 17
D 110470935 PRPF18; pre-mRNA-splicing factor 18 isoform X1 K12817 PRPF18; pre-mRNA-splicing factor 18
D 110481084 SLU7; pre-mRNA-splicing factor SLU7 isoform X1 K12819 SLU7; pre-mRNA-processing factor SLU7
D 110471818 DHX8; ATP-dependent RNA helicase DHX8 isoform X1 K12818 DHX8; ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
D 110468757 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1 K12815 DHX38; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
D 110476133 RSRC1; serine/Arginine-related protein 53 K24594 RSRC1; arginine/serine-rich coiled-coil protein 1
C PPlases
D 110484617 PPIL3; peptidyl-prolyl cis-trans isomerase-like 3 K12734 PPIL3; peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8]
D 110468850 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 K12735 PPIL4; peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]
D 110472771 PPIG; peptidyl-prolyl cis-trans isomerase G K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]
D 110472584 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 K12736 PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
D 110472579 CWC27; spliceosome-associated protein CWC27 homolog K12737 SDCCAG10; peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:5.2.1.8]
C hnRNP proteins
D 110469873 HNRNPH3; heterogeneous nuclear ribonucleoprotein H3 isoform X1 K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H
D 110482770 HNRNPH1; heterogeneous nuclear ribonucleoprotein H isoform X1 K12898 HNRNPF_H; heterogeneous nuclear ribonucleoprotein F/H
D 110484303 HNRNPR; heterogeneous nuclear ribonucleoprotein R isoform X1 K13161 HNRNPR; heterogeneous nuclear ribonucleoprotein R
D 110475933 RALY; RNA-binding protein Raly isoform X1 K12895 RALY; RNA-binding protein Raly
C Complex C specific factors
D 110481526 CCDC130; coiled-coil domain-containing protein 130 K13115 CCDC130; coiled-coil domain-containing protein 130
D 110470827 DDX41; probable ATP-dependent RNA helicase DDX41 K13116 DDX41; ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
D 110469271 DHX35; probable ATP-dependent RNA helicase DHX35 isoform X1 K13117 DHX35; ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
D 110481327 ESS2; splicing factor ESS-2 homolog K13118 DGCR14; protein DGCR14
D 110484437 protein FAM50A K13119 FAM50; protein FAM50
D 110475729 FAM32A; protein FAM32A K13120 FAM32A; protein FAM32A
D 110475500 protein FRA10AC1 isoform X1 K13121 FRA10AC1; protein FRA10AC1
D 110474718 FRG1; LOW QUALITY PROTEIN: protein FRG1 K13122 FRG1; protein FRG1
D 110481928 GPATCH1; G patch domain-containing protein 1 isoform X1 K13123 GPATCH1; G patch domain-containing protein 1
D 110481141 WDR83; WD repeat domain-containing protein 83 K13124 MORG1; mitogen-activated protein kinase organizer 1
D 110481018 WD repeat domain-containing protein 83 K13124 MORG1; mitogen-activated protein kinase organizer 1
D 110480666 NOSIP; nitric oxide synthase-interacting protein K13125 NOSIP; nitric oxide synthase-interacting protein
D 110470075 PABPC1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
D 110475339 PABPC4; polyadenylate-binding protein 4 K13126 PABPC; polyadenylate-binding protein
D 110469299 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
D 110474826 E3 ubiquitin-protein ligase RNF113A isoform X1 K13127 RNF113A; RING finger protein 113A
D 110482607 E3 ubiquitin-protein ligase RNF113A K13127 RNF113A; RING finger protein 113A
D 110478206 TFIP11; tuftelin-interacting protein 11 K13103 TFIP11; tuftelin-interacting protein 11
D 110478156 ZCCHC8; zinc finger CCHC domain-containing protein 8 isoform X1 K13128 ZCCHC8; zinc finger CCHC domain-containing protein 8
D 110469515 CACTIN; cactin isoform X1 K25058 CACTIN; cactin
D 110477511 SDE2; replication stress response regulator SDE2 K25059 SDE2; replication stress response regulator SDE2
D 110482078 PRKRIP1; PRKR-interacting protein 1 K26159 PRKRIP1; PRKR-interacting protein 1
#
AOther splicing related proteins
B Proteins involved in snRNP biogenesis
C SMN complex factors
D 110475047 survival motor neuron protein isoform X1 K13129 SMN; survival motor neuron protein
D 110477206 GEMIN2; gem-associated protein 2 K13130 GEMIN2; gem associated protein 2
D 110475394 DDX20; probable ATP-dependent RNA helicase DDX20 K13131 DDX20; ATP-dependent RNA helicase DDX20 [EC:5.6.2.7]
D 110467709 GEMIN4; gem-associated protein 4 K13132 GEMIN4; gem associated protein 4
D 110482701 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
D 110474845 GEMIN6; gem-associated protein 6 K13134 GEMIN6; gem associated protein 6
D 110473220 GEMIN8; gem-associated protein 8 K13136 GEMIN8; gem associated protein 8
D 110472967 STRAP; serine-threonine kinase receptor-associated protein K13137 STRAP; serine-threonine kinase receptor-associated protein
C Integrator complex
D 110475496 INTS1; integrator complex subunit 1 isoform X1 K13138 INTS1; integrator complex subunit 1
D 110467648 INTS2; integrator complex subunit 2 K13139 INTS2; integrator complex subunit 2
D 110476851 INTS3; integrator complex subunit 3 K13140 INTS3; integrator complex subunit 3
D 110472345 INTS4; integrator complex subunit 4 isoform X1 K13141 INTS4; integrator complex subunit 4
D 110480989 INTS5; integrator complex subunit 5 K13142 INTS5; integrator complex subunit 5
D 110468565 INTS6; integrator complex subunit 6 isoform X1 K13143 INTS6; integrator complex subunit 6
D 110479938 INTS7; integrator complex subunit 7 isoform X1 K13144 INTS7; integrator complex subunit 7
D 110477448 INTS8; integrator complex subunit 8 K13145 INTS8; integrator complex subunit 8
D 110476419 INTS9; integrator complex subunit 9 isoform X1 K13146 INTS9; integrator complex subunit 9
D 110471713 INTS10; integrator complex subunit 10 isoform X1 K13147 INTS10; integrator complex subunit 10
D 110470307 INTS11; integrator complex subunit 11 K13148 CPSF3L; integrator complex subunit 11 [EC:3.1.27.-]
D 110471161 INTS12; integrator complex subunit 12 K13149 INTS12; integrator complex subunit 12
C Other proteins involved in snRNP biogenesis
D 110484643 COIL; coilin K13150 COIL; coilin
D 110473623 SMNDC1; survival of motor neuron-related-splicing factor 30 K12839 SMNDC1; survival of motor neuron-related-splicing factor 30
D 110479815 SNUPN; snurportin-1 K13151 SNUPN; snurportin-1
D 110476236 USB1; U6 snRNA phosphodiesterase K23093 USB1; U6 snRNA phosphodiesterase [EC:3.1.4.-]
D 110472342 CLNS1A; methylosome subunit pICln K05019 CLNS1A; chloride channel, nucleotide-sensitive, 1A
D 110484763 TGS1; trimethylguanosine synthase K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-]
D 110480499 integrator complex subunit 6-like isoform X1 K13180 INTS6L; integrator complex subunit 6-like
D 110470477 ZPR1; zinc finger protein ZPR1 K06874 ZPR1; zinc finger protein ZPR1
B Minor spliceosome components
C Minor spliceosome specific factors
D 110474134 ZMAT5; zinc finger matrin-type protein 5 K13152 ZMAT5; U11/U12 small nuclear ribonucleoprotein 20 kDa protein
D 110471030 SNRNP25; U11/U12 small nuclear ribonucleoprotein 25 kDa protein K13153 SNRNP25; U11/U12 small nuclear ribonucleoprotein 25 kDa protein
D 110478574 ZCRB1; zinc finger CCHC-type and RNA-binding motif-containing protein 1 K13154 ZCRB1; U11/U12 small nuclear ribonucleoprotein 31 kDa protein
D 110471782 SNRNP35; U11/U12 small nuclear ribonucleoprotein 35 kDa protein K13155 SNRNP35; U11/U12 small nuclear ribonucleoprotein 35 kDa protein
D 110474752 SNRNP48; U11/U12 small nuclear ribonucleoprotein 48 kDa protein K13156 SNRNP48; U11/U12 small nuclear ribonucleoprotein 48 kDa protein
D 110484221 RNPC3; RNA-binding region-containing protein 3 K13157 RNPC3; U11/U12 small nuclear ribonucleoprotein 65 kDa protein
C Minor spliceosome associated proteins
D 110482445 RBM48; RNA-binding protein 48 isoform X1 K24824 RBM48; RNA-binding protein 48
D 110484695 ARMC7; armadillo repeat-containing protein 7 K24825 ARMC7; armadillo repeat-containing protein 7
D 110478022 CRIPT; cysteine-rich PDZ-binding protein K24826 CRIPT; cysteine-rich PDZ-binding protein
D 110476906 SCNM1; sodium channel modifier 1 isoform X1 K24827 SCNM1; sodium channel modifier 1
D 110481374 PPIL2; RING-type E3 ubiquitin-protein ligase PPIL2 K10598 PPIL2; peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]
D 110470460 CCDC84; coiled-coil domain-containing protein 84 K26160 CENATAC; centrosomal AT-AC splicing factor
B Spliceosome associated proteins (SAPs)
C hnRNP proteins
D 110474646 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
D 110480931 HNRNPD; heterogeneous nuclear ribonucleoprotein D0 K13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A/B/D
D 110480932 HNRNPDL; heterogeneous nuclear ribonucleoprotein D-like K13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A/B/D
D 110482694 HNRNPAB; heterogeneous nuclear ribonucleoprotein A/B isoform X1 K13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A/B/D
D 110474846 HNRNPLL; heterogeneous nuclear ribonucleoprotein L-like isoform X1 K13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L
D 110478791 HNRNPL; heterogeneous nuclear ribonucleoprotein L K13159 HNRNPL; heterogeneous nuclear ribonucleoprotein L
D 110478927 SYNCRIP; heterogeneous nuclear ribonucleoprotein Q isoform X1 K13160 SYNCRIP; heterogeneous nuclear ribonucleoprotein Q
D 110480522 PCBP2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
D 110471867 MSL1; male-specific lethal 1 homolog K13163 MSL1; male-specific lethal 1
D 110474067 MSL2; E3 ubiquitin-protein ligase MSL2 K13164 MSL2; male-specific lethal 2
C SR proteins
D 110473235 SRSF11; serine/arginine-rich splicing factor 11 isoform X1 K12899 SRSF11; serine/arginine-rich splicing factor 11
D 110472591 SREK1; splicing regulatory glutamine/lysine-rich protein 1 isoform X1 K13165 SREK1; splicing regulatory glutamine/lysine-rich protein 1
D 110478326 SUGP2; SURP and G-patch domain-containing protein 2 K13166 SUGP2; SURP and G-patch domain-containing protein 2
D 110481470 SCAF4; SR-related and CTD-associated factor 4 isoform X1 K13167 SCAF4; SR-related and CTD-associated factor 4
D 110481741 CLASRP; LOW QUALITY PROTEIN: CLK4-associating serine/arginine rich protein K13168 CLASRP; CLK4-associating serine/arginine rich protein
D 110479377 AKAP17A; A-kinase anchor protein 17A K13169 AKAP17; A-kinase anchor protein 17
D 110478374 PNISR; arginine/serine-rich protein PNISR K13170 PNISR; arginine/serine-rich protein PNISR
C SR-related proteins
D 110472875 SRRM1; serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D 110470525 ARGLU1; arginine and glutamate-rich protein 1 K13173 ARGLU1; arginine and glutamate-rich protein 1
D 110474940 SON; protein SON isoform X1 K23718 SON; protein SON
D 110468028 PSIP1; PC4 and SFRS1-interacting protein K25057 PSIP1; PC4 and SFRS1-interacting protein
D 110480828 ILDR1; immunoglobulin-like domain-containing receptor 1 K25781 ILDR1; immunoglobulin-like domain-containing receptor 1
D 110480166 ILDR2; immunoglobulin-like domain-containing receptor 2 isoform X2 K25782 ILDR2; immunoglobulin-like domain-containing receptor 2
D 110473240 ZRANB2; zinc finger Ran-binding domain-containing protein 2 K26076 ZRANB2; zinc finger Ran-binding domain-containing protein 2
C TREX complex
D 110482377 THOC1; THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1
D 110480493 THOC2; THO complex subunit 2 isoform X2 K12879 THOC2; THO complex subunit 2
D 110470796 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
D 110472418 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
D 110474145 THOC5; THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
D 110482389 THOC6; THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
D 110474109 THOC7; THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
D 110483887 spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
C RNA helicase-like proteins
D 110467935 DDX1; ATP-dependent RNA helicase DDX1 K13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
D 110479111 DDX3X; ATP-dependent RNA helicase DDX3X K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
D 110483848 DDX17; probable ATP-dependent RNA helicase DDX17 K13178 DDX17; ATP-dependent RNA helicase DDX17 [EC:5.6.2.7]
D 110480613 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 110476160 DDX27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 110483951 DDX43; probable ATP-dependent RNA helicase DDX43 K17043 DDX43; ATP-dependent RNA helicase DDX43 [EC:5.6.2.7]
D 110467801 DHX9; ATP-dependent RNA helicase A isoform X1 K13184 DHX9; ATP-dependent RNA/DNA helicase DHX9 [EC:5.6.2.6 5.6.2.4]
D 110475097 DHX30; ATP-dependent RNA helicase DHX30 isoform X2 K13185 DHX30; ATP-dependent RNA helicase DHX30 [EC:5.6.2.6]
D 110468446 DHX32; putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 K18994 DHX32; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:5.6.2.6]
D 110467738 YTHDC2; 3'-5' RNA helicase YTHDC2 K20099 YTHDC2; ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]
D 110468705 DQX1; ATP-dependent RNA helicase DQX1 K14433 DQX1; ATP-dependent helicase [EC:5.6.2.-]
C RNA binding proteins (RBPs)
D 110478825 RNA-binding protein 4B isoform X1 K13187 RBM4; RNA-binding protein 4
D 110470420 RBM7; RNA-binding protein 7 K13188 RBM7; RNA-binding protein 7
D 110480070 splicing regulator RBM11-like K25005 RBM11; splicing regulator RBM11
D 116183120 RBM12; RNA-binding protein 12 K24526 RBM12; RNA-binding protein 12
D 110477433 RBM12B; RNA-binding protein 12B K24526 RBM12; RNA-binding protein 12
D 110469140 RBM15; RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
D 110469951 RBM15B; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
D 110482488 SCAF8; SR-related and CTD-associated factor 8 K13191 RBM16; RNA-binding protein 16
D 110477662 RBM18; probable RNA-binding protein 18 K24527 RBM18; RNA-binding protein 18
D 110483567 RBM38; RNA-binding protein 38 K25006 RBM24_38; RNA-binding protein 24/38
D 110483341 RBM24; RNA-binding protein 24 K25006 RBM24_38; RNA-binding protein 24/38
D 110470040 RBM26; RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26
D 110477364 RBM27; RNA-binding protein 27 isoform X1 K13193 RBM27; RNA-binding protein 27
D 110483915 RBPMS2; RNA-binding protein with multiple splicing 2 K25091 RBPMS; RNA-binding protein with multiple splicing
D 110471188 RBPMS; RNA-binding protein with multiple splicing K25091 RBPMS; RNA-binding protein with multiple splicing
D 110471526 ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 K12968 ADAR; double-stranded RNA-specific adenosine deaminase [EC:3.5.4.37]
D 110471690 ADARB1; double-stranded RNA-specific editase 1 K13194 ADARB; double stranded RNA-specific editase B [EC:3.5.-.-]
D 110469757 ADARB2; double-stranded RNA-specific editase B2 isoform X1 K13194 ADARB; double stranded RNA-specific editase B [EC:3.5.-.-]
D 110474645 CBX3; chromobox protein homolog 3 isoform X1 K11586 CBX3; chromobox protein 3
D 110480194 CIRBP; cold-inducible RNA-binding protein isoform X2 K13195 CIRBP; cold-inducible RNA-binding protein
D 110475220 YBX3; Y-box-binding protein 3 K06099 CSDA; cold shock domain protein A
D 110478852 DPF2; zinc finger protein ubi-d4 isoform X1 K13196 DPF2; zinc finger protein ubi-d4
D 110474657 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
D 110475364 LOW QUALITY PROTEIN: KH domain-containing, RNA-binding, signal transduction-associated protein 1 K13198 KHDRBS1; KH domain-containing, RNA-binding, signal transduction-associated protein 1
D 110468094 KHDRBS2; KH domain-containing, RNA-binding, signal transduction-associated protein 2 isoform X1 K17843 KHDRBS2; KH domain-containing, RNA-binding, signal transduction-associated protein 2
D 110475927 KHDRBS3; KH domain-containing, RNA-binding, signal transduction-associated protein 3 K14942 KHDRBS3; KH domain-containing, RNA-binding, signal transduction-associated protein 3
D 110470559 MBNL2; muscleblind-like protein 2 isoform X1 K14943 MBNL; muscleblind
D 110480486 MBNL3; muscleblind-like protein 3 isoform X1 K14943 MBNL; muscleblind
D 110479916 MBNL1; muscleblind-like protein 1 K14943 MBNL; muscleblind
D 110475289 NOVA1; RNA-binding protein Nova-1 isoform X1 K14944 NOVA; RNA-binding protein Nova
D 110477923 QKI; protein quaking isoform X1 K14945 QKI; protein quaking
D 110471021 RBFOX1; RNA binding protein fox-1 homolog 1 isoform X5 K14946 RBFOX; RNA binding protein fox-1
D 110472437 RBFOX3; RNA binding protein fox-1 homolog 3 isoform X1 K14946 RBFOX; RNA binding protein fox-1
D 110483865 RBFOX2; RNA binding protein fox-1 homolog 2 isoform X1 K14946 RBFOX; RNA binding protein fox-1
D 110473231 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein isoform X1 K13199 SERBP1; plasminogen activator inhibitor 1 RNA-binding protein
D 110477667 STRBP; spermatid perinuclear RNA-binding protein isoform X1 K13200 STRBP; spermatid perinuclear RNA-binding protein
D 110469991 TIAL1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
D 110478628 TIA1; nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
D 110469622 TOE1; target of EGR1 protein 1 K13202 TOE1; target of EGR1 protein 1
D 110484209 ZFR; zinc finger RNA-binding protein isoform X1 K13203 ZFR; zinc finger RNA-binding protein
D 110468476 ZNF326; DBIRD complex subunit ZNF326 isoform X1 K13204 ZNF326; zinc finger protein 326
D 110471708 YTHDC1; YTH domain-containing protein 1 isoform X1 K20100 YTHDC1; YTH domain-containing protein 1
D 110480509 NKAP; NF-kappa-B-activating protein K25931 NKAP; NF-kappa-B-activating protein
C Other SAPs
D 110480273 AAR2; protein AAR2 homolog K13205 AAR2; A1 cistron-splicing factor AAR2
D 110467704 NSRP1; nuclear speckle splicing regulatory protein 1 K13206 CCDC55; coiled-coil domain-containing protein 55
D 110482691 CLK4; dual specificity protein kinase CLK4 isoform X1 K23561 CLK1_4; dual specificity protein kinase CLK1/4 [EC:2.7.12.1]
D 110471487 CLK2; dual specificity protein kinase CLK2 isoform X1 K08823 CLK2_3; dual specificity protein kinase CLK2/3 [EC:2.7.12.1]
D 110479751 CLK3; dual specificity protein kinase CLK3 K08823 CLK2_3; dual specificity protein kinase CLK2/3 [EC:2.7.12.1]
D 110483971 CELF6; CUGBP Elav-like family member 6 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 110475065 CELF4; CUGBP Elav-like family member 4 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 110479070 CELF3; CUGBP Elav-like family member 3 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 110472051 CELF1; CUGBP Elav-like family member 1 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 110470922 CELF2; CUGBP Elav-like family member 2 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 110475765 CELF5; CUGBP Elav-like family member 5 isoform X1 K13207 CUGBP; CUG-BP- and ETR3-like factor
D 110473225 DNAJC6; putative tyrosine-protein phosphatase auxilin isoform X1 K09526 DNAJC6; DnaJ homolog subfamily C member 6
D 110484290 DNAJC8; dnaJ homolog subfamily C member 8 K09528 DNAJC8; DnaJ homolog subfamily C member 8
D 110471038 DNAJC13; dnaJ homolog subfamily C member 13 isoform X1 K09533 DNAJC13; DnaJ homolog subfamily C member 13
D 110473423 ELAVL2; ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
D 110469918 ELAVL4; ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
D 110483412 ELAV-like protein 3 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
D 110473021 ESRP2; epithelial splicing regulatory protein 2 isoform X1 K14947 ESRP1_2; epithelial splicing regulatory protein 1/2
D 110477446 ESRP1; epithelial splicing regulatory protein 1 K14947 ESRP1_2; epithelial splicing regulatory protein 1/2
D 110474149 EWSR1; RNA-binding protein EWS isoform X2 K13209 EWSR1; RNA-binding protein EWS
D 110469107 FUBP1; far upstream element-binding protein 1 isoform X2 K13210 FUBP; far upstream element-binding protein
D 110481937 KHSRP; far upstream element-binding protein 2 K13210 FUBP; far upstream element-binding protein
D 110482215 FUBP3; far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
D 110473100 PAXBP1; PAX3- and PAX7-binding protein 1 isoform X1 K13211 GCFC; GC-rich sequence DNA-binding factor
D 110483195 putative RNA-binding protein Luc7-like 2 isoform X1 K13212 LUC7L2; RNA-binding protein Luc7-like 2
D 110477372 MATR3; matrin-3 isoform X1 K13213 MATR3; matrin 3
D 110472660 NONO; non-POU domain-containing octamer-binding protein isoform X2 K13214 NONO; non-POU domain-containing octamer-binding protein
D 110475657 PSPC1; paraspeckle component 1 isoform X1 K24993 PSPC1; paraspeckle component 1
D 110484311 SFPQ; splicing factor, proline- and glutamine-rich K13219 SFPQ; splicing factor, proline- and glutamine-rich
D 110480688 NRIP2; nuclear receptor-interacting protein 2 K13215 NRIP2; nuclear receptor-interacting protein 2
D 110485072 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D 110478165 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D 110482805 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
D 110484245 PPP1R8; nuclear inhibitor of protein phosphatase 1 K13216 PPP1R8; nuclear inhibitor of protein phosphatase 1 [EC:3.1.4.-]
D 110482783 PRMT5; LOW QUALITY PROTEIN: protein arginine N-methyltransferase 5 K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]
D 110472812 PRPF4B; LOW QUALITY PROTEIN: serine/threonine-protein kinase PRP4 homolog K08827 PRPF4B; serine/threonine-protein kinase PRP4 [EC:2.7.11.1]
D 110477052 PRPF39; pre-mRNA-processing factor 39 isoform X1 K13217 PRPF39; pre-mRNA-processing factor 39
D 110475747 PTBP1; polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
D 110468016 PTBP2; polypyrimidine tract-binding protein 2 isoform X1 K14948 PTBP2; polypyrimidine tract-binding protein 2
D 110467759 PTBP3; polypyrimidine tract-binding protein 3 K17844 PTBP3; polypyrimidine tract-binding protein 3
D 110473463 SRPK1; SRSF protein kinase 1 isoform X1 K15409 SRPK1; serine/threonine-protein kinase SRPK1 [EC:2.7.11.1]
D 110472727 SRPK2; SRSF protein kinase 2 isoform X1 K08831 SRPK2; serine/threonine-protein kinase SRPK2 [EC:2.7.11.1]
D 110483113 XRCC6; X-ray repair cross-complementing protein 6 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
D 110470858 WBP4; WW domain-binding protein 4 K13220 WBP4; WW domain-binding protein 4
D 110475398 WDR77; methylosome protein 50 K13221 WDR77; methylosome protein 50
D 110476131 CCNL1; cyclin-L1 K23966 CCNL; cyclin L
D 110470340 CCNL2; cyclin-L2 K23966 CCNL; cyclin L
D 110474069 DBR1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
D 110474032 CWF19L1; CWF19-like protein 1 K24939 CWF19L1; CWF19-like protein 1
D 110470045 CWF19L2; CWF19-like protein 2 K24940 CWF19L2; CWF19-like protein 2
D 110475767 scaffold attachment factor B1 K25092 SAFB; scaffold attachment factor B
D 110475769 scaffold attachment factor B1 isoform X1 K25092 SAFB; scaffold attachment factor B
#
ASplicing related RNAs
B 116183512 U1 spliceosomal RNA K14276 U1snRNA; U1 spliceosomal RNA
B 116183921 U2 spliceosomal RNA K14277 U2snRNA; U2 spliceosomal RNA
B 116184345 U2 spliceosomal RNA K14277 U2snRNA; U2 spliceosomal RNA
B 116184358 U2 spliceosomal RNA K14277 U2snRNA; U2 spliceosomal RNA
B 116184202 U4 spliceosomal RNA K14278 U4snRNA; U4 spliceosomal RNA
B 116183939 U5 spliceosomal RNA K14279 U5snRNA; U5 spliceosomal RNA
B 116183932 U5 spliceosomal RNA K14279 U5snRNA; U5 spliceosomal RNA
B 116184284 U6 spliceosomal RNA K14280 U6snRNA; U6 spliceosomal RNA
B 116183871 U4atac minor spliceosomal RNA K26388 RNU4ATAC; U4 atac small nuclear RNA
B 116184245 U6atac minor spliceosomal RNA K26387 RNU6ATAC; U6atac small nuclear RNA
B 116183627 U6atac minor spliceosomal RNA K26387 RNU6ATAC; U6atac small nuclear RNA
B 116184328 Z30 small nucleolar RNA K27200 SNORD7; small nucleolar RNA SNORD7
B 116184442 small Cajal body-specific RNA 1 K27152 SCARNA1; small Cajal body-specific RNA 1
B 116184511 small Cajal body-specific RNA 2 K27161 SCARNA2; small Cajal body-specific RNA 2
B 116184489 small Cajal body-specific RNA 4 K27153 SCARNA4; small Cajal body-specific RNA 4
B 116183981 small Cajal body-specific RNA 6 K27154 SCARNA6; small Cajal body-specific RNA 6
B 116183982 small Cajal body-specific RNA 6 K27154 SCARNA6; small Cajal body-specific RNA 6
B 116183986 small Cajal body-specific RNA 7 K27166 SCARNA7; small Cajal body-specific RNA 7
B 116184652 small Cajal body-specific RNA 8 K27167 SCARNA8; small Cajal body-specific RNA 8
B 116184359 small nucleolar RNA U85 K27155 SCARNA10; small Cajal body-specific RNA 10
B 116184354 small Cajal body-specific RNA 11 K27156 SCARNA11; small Cajal body-specific RNA 11
B 116183770 small Cajal body-specific RNA 13 K27169 SCARNA13; small Cajal body-specific RNA 13
B 116184025 small Cajal body-specific RNA 14 K27170 SCARNA14; small Cajal body-specific RNA 14
B 116184024 small Cajal body-specific RNA 15 K27158 SCARNA15; small Cajal body-specific RNA 15
B 116184287 small Cajal body-specific RNA 16 K27159 SCARNA16; small Cajal body-specific RNA 16
B 116183662 small nucleolar RNA U109 K27172 SCARNA18; small Cajal body-specific RNA 18
B 116184347 small Cajal body-specific RNA 24 K27160 SCARNA24; small Cajal body-specific RNA 24
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 15, 2024